Params: ./cmzasha --no-stderr --filter 40 22 Rfam/cm/RF00037.cm @/projects/bio/zasha/seqs/embl_release76/full-embl.list 1 hmm data/TryAllCm/RF00037_greedy_forwardinf_cfsqp_cycling_Ecoli_0MM.bin Build: release Host: recycle.cs.washington.edu pid: 13338 ----cmFile: Rfam/cm/RF00037.cm (global) ----fastaFile: /projects/bio/zasha/seqs/embl/fun.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/fun.dat.fasta.gz ----sequence: #64900,sp|AL355926.1|NCB17C10 Neurospora crassa DNA linkage group II BAC clone B17C10 ----isReversed: 1 ----hitSequence: GGUCUCUGCAACAGUGUUUGCAUAAAC hit 0 : 57052 57026 (rev) 23.63 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U C U:CAACAGUGUUUG:A A:: 11433 GGUCUC--UGCAACAGUGUUUGCA-UAAAC 11459 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/fun.dat.fasta.gz ----sequence: #69345,sp|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence ----isReversed: 1 ----hitSequence: UCUCUCUUUCGCAGUGCUGAAAAGAAA hit 1 : 224375 224349 (rev) 22.06 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC U::::CAGUG+::::A AGA:: 92239 UCUCUC--UUUCGCAGUGCUGAAA-AGAAA 92265 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #13377,sp|AF068224.1|AF068224 Ixodes ricinus ferritin (Fer) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUUGCUUCAACAGUGAUUGAACGAGC hit 2 : 1 27 (fwd) 22.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U++C U:CAACAGUG UUG:A ++A : 1 UUUUGC--UUCAACAGUGAUUGAA-CGAGC 27 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #13378,sp|AF068225.2|AF068225 Ornithodoros moubata ferritin (Fer) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUUGCUUCAACAGUGUUUGAACGAGC hit 3 : 6 32 (fwd) 23.90 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U++C U:CAACAGUGUUUG:A ++A : 6 UUUUGC--UUCAACAGUGUUUGAA-CGAGC 32 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #28998,sp|AY120878.1|AY120878 Araneus ventricosus ferritin mRNA, complete cds. ----isReversed: 0 ----hitSequence: GGUCGCGUCAACAGUGUUUGAUCGAAC hit 4 : 50 76 (fwd) 26.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC+C ::CAACAGUGUUUG:: +GA:: 50 GGUCGC--GUCAACAGUGUUUGAU-CGAAC 76 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #32092,sp|AY157150.1|AY157150 Branchiostoma belcheri ferritin mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUACUGCUUCUUCAGUGUAAGAACGUGAC hit 5 : 1 30 (fwd) 23.20 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U ::+GCU:C :CAGUGU: G:AC:: A: 1 GUUACUGCUUCUUCAGUGUAAGAACGUGAC 30 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #38251,sp|AY307447.1|AY307447 Boophilus microplus ferritin mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUUGCUUCAACAGUGAUUGAACGAGC hit 6 : 2 28 (fwd) 22.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U++C U:CAACAGUG UUG:A ++A : 2 UUUUGC--UUCAACAGUGAUUGAA-CGAGC 28 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11796,sp|X56778.1|LSSFISP L.stagnalis L. mRNA for som fer gene ----isReversed: 0 ----hitSequence: UGUCUUGCUGCGUCAGUGAACGUACAGACA hit 7 : 18 47 (fwd) 22.75 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCU+GCU C::CAGUG ::G ACAGA:: 18 UGUCUUGCUGCGUCAGUGAACGUACAGACA 47 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #5592,sp|AB098993.1|AB098993 Bos taurus mRNA for similar to ferritin H subunit, partial cds, clone: ORCS11746. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 8 : 15 44 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 15 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 44 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #5663,sp|AB099065.1|AB099065 Bos taurus mRNA for similar to ferritin H subunit, partial cds, clone: ORCS13217. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGNAA hit 9 : 31 60 (fwd) 30.51 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUG+UUG:AC:G A: 31 UUUCCUGCUUCAACAGUGCUUGAACGGNAA 60 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #5690,sp|AB099093.1|AB099093 Bos taurus mRNA for similar to ferritin L subunit, partial cds, clone: ORCS13934. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGCUUGGACGGAAC hit 10 : 27 56 (fwd) 34.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUG+UUGGAC:GA:: 27 UCUCUUGCUUCAACAGUGCUUGGACGGAAC 56 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #7029,sp|AC087834.2|AC087834 Pan troglodytes clone RP43-124I17, complete sequence. ----isReversed: 1 ----hitSequence: UUUAUCGUAAGCAGUGACUUGUGUAAG hit 11 : 120809 120783 (rev) 24.31 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU::C :U:A:CAGUG :U:G: ::AAG 44254 UUUAUC--GUAAGCAGUGACUUGU-GUAAG 44280 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #7059,sp|AC091381.3|AC091381 Papio cynocephalus anubis clone RP41-468N20, complete sequence. ----isReversed: 1 ----hitSequence: UUUAUCAUAAGCAGUGACUUGUGUAAG hit 12 : 51047 51021 (rev) 24.73 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU::C :U:A:CAGUG :U:G: ::AAG 105307 UUUAUC--AUAAGCAGUGACUUGU-GUAAG 105333 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #7063,sp|AC091403.3|AC091403 Sus scrofa clone RP44-431F19, complete sequence. ----isReversed: 0 ----hitSequence: AUUAUUGCUAACAGUGUUUAGCAUAAA hit 13 : 31333 31359 (fwd) 23.05 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU:U+ : :AACAGUGUUU: : A:AA 31333 AUUAUU--GCUAACAGUGUUUAGC-AUAAA 31359 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #7217,sp|AC123963.4|AC123963 Macaca mulatta clone CH250-246J11, complete sequence. ----isReversed: 1 ----hitSequence: UUUAUCAUAAGCAGUGACUUGUGUAAG hit 14 : 143593 143567 (rev) 24.73 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU::C :U:A:CAGUG :U:G: ::AAG 11840 UUUAUC--AUAAGCAGUGACUUGU-GUAAG 11866 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #10918,sp|AF086786.1|AF086786 Delphinapterus leucas erythroid-specific 5-aminolevulinic acid synthase (ALS2) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCGUUCGUCCUCAGUGCAGGGCAACAG hit 15 : 2 28 (fwd) 23.78 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 2 UCGUUC--GUCCUCAGUGCAGGGC-AACAG 28 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #19196,sp|AF285177.1|AF285177 Canis familiaris ferritin mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 16 : 3 32 (fwd) 35.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 3 GUUCCUGCUUCAACAGUGCUUGGACGGAAC 32 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #29038,sp|AY112742.1|AY112742 Equus caballus ferritin heavy chain mRNA, complete cds. ----isReversed: 0 ----hitSequence: AGUCCUGCUUCAACAGUGCUUGAACGGAAC hit 17 : 12 41 (fwd) 31.08 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UC:+GCU:CAACAGUG+UUG:AC:GA: 12 AGUCCUGCUUCAACAGUGCUUGAACGGAAC 41 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #44892,sp|X14578.1|OCFERL5 Rabbit mRNA for ferritin light chain subunit 5'end ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 18 : 31 60 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 31 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 60 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #49364,sp|D15071.1|SSFE Pig mRNA for ferritin heavy-chain, complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 19 : 13 42 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 13 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 42 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #2792,sp|AB052620.1|AB052620 Mus musculus DDM36 mRNA, complete cds. ----isReversed: 1 ----hitSequence: GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC hit 20 : 3371 3342 (rev) 22.40 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GC :CA:CAGUGU:UG: C:G::: 2849 GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC 2878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #2793,sp|AB052621.1|AB052621 Mus musculus DDM36E mRNA, complete cds. ----isReversed: 1 ----hitSequence: GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC hit 21 : 3374 3345 (rev) 22.40 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GC :CA:CAGUGU:UG: C:G::: 2849 GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC 2878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #4920,sp|AC087891.12|AC087891 Mus musculus Strain C57BL6/J Chromosome 10 RP23-440N1, complete sequence. ----isReversed: 1 ----hitSequence: UCCCUUGGUGACAGUGUUCACCAGCAG hit 22 : 79770 79744 (rev) 23.06 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U::CU+ ::::ACAGUGUU:::: AG::G 115283 UCCCUU--GGUGACAGUGUUCACC-AGCAG 115309 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #4992,sp|AC091763.24|AC091763 Mus musculus chromosome 10 clone rp23-198o2 strain C57BL/6J, complete sequence. ----isReversed: 0 ----hitSequence: UUUAGCUUCGACAGUGUUUUGAGUAAG hit 23 : 4617 4643 (fwd) 23.86 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU::C UU :ACAGUGUU: GA ::AAG 4617 UUUAGC--UUCGACAGUGUUUUGA-GUAAG 4643 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5006,sp|AC092480.27|AC092480 Mus musculus chromosome 17 clone rp23-387f2 strain C57BL/6J, complete sequence. ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 24 : 36562 36591 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 36562 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 36591 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5007,sp|AC092481.28|AC092481 Mus musculus chromosome 17 clone rp23-456p8 strain C57BL/6J, complete sequence. ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 25 : 127541 127570 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 127541 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 127570 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5013,sp|AC092855.39|AC092855 Mus musculus chromosome 3 clone rp23-49o17 strain C57BL/6J, complete sequence. ----isReversed: 0 ----hitSequence: UCUUGUUUCAACAGUGUUUGGACUAAAC hit 26 : 159766 159793 (fwd) 25.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U: + UUCAACAGUGUUUGGAC :A:: 159766 UCUUGU--UUCAACAGUGUUUGGACUAAAC 159793 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5310,sp|AC108392.17|AC108392 Mus musculus, clone RP23-121B23, complete sequence. ----isReversed: 1 ----hitSequence: UGUCUUGCUUUAACUGUGUUUGAACGGAAC hit 27 : 160456 160427 (rev) 23.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU: AAC GUGUUU :AC:GA:: 47308 UGUCUUGCUUUAACUGUGUUUGAACGGAAC 47337 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5352,sp|AC109831.5|AC109831 Mus musculus chromosome 9 clone RP24-104B17, complete sequence. ----isReversed: 1 ----hitSequence: AGCCCCUGCAACAGUGUUUGCAGGAAG hit 28 : 101849 101823 (rev) 22.72 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::C:C U:CAACAGUGUUUG:A :G:: 36248 AGCCCC--UGCAACAGUGUUUGCA-GGAAG 36274 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5359,sp|AC110170.6|AC110170 Mus musculus, clone RP23-301G24, complete sequence. ----isReversed: 1 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGGACAGAAC hit 29 : 81271 81242 (rev) 35.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCU+GCUUCAACAGUGUUUGGACAGA:: 91811 UGUCUUGCUUCAACAGUGUUUGGACAGAAC 91840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5363,sp|AC110237.7|AC110237 Mus musculus, clone RP23-104B24, complete sequence. ----isReversed: 1 ----hitSequence: UUUUUUUUCAACAGUUUUUGAAAAAAA hit 30 : 153032 153006 (rev) 25.13 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:U+ U:CAACAGU UUUG:A A:AA: 102925 UUUUUU--UUCAACAGUUUUUGAA-AAAAA 102951 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5407,sp|AC112161.9|AC112161 Mus Musculus chromosome 9 BAC clone MGS1-117K9 ES cell line, Complete Sequence, complete sequence. ----isReversed: 0 ----hitSequence: GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC hit 31 : 105605 105634 (fwd) 22.40 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GC :CA:CAGUGU:UG: C:G::: 105605 GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC 105634 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5816,sp|AC121816.3|AC121816 Mus musculus chromosome 3 clone RP23-458H21, complete sequence. ----isReversed: 0 ----hitSequence: UUUUUCCUCUACAGUGUUAGGGAGAAA hit 32 : 96141 96167 (fwd) 22.09 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU+UC UC ACAGUGUU GG A+AA: 96141 UUUUUC--CUCUACAGUGUUAGGG-AGAAA 96167 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5850,sp|AC121858.3|AC121858 Mus musculus chromosome 8 clone RP24-104B23, complete sequence. ----isReversed: 0 ----hitSequence: UUUUUUGCUGCCACAUAGCUGGCAUAAAAG hit 33 : 112619 112648 (fwd) 22.35 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU:U+GCU:C:ACA G+U:G:A A:AAG 112619 UUUUUUGCUGCCACAUAGCUGGCAUAAAAG 112648 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6192,sp|AC122459.2|AC122459 Mus musculus chromosome 15 clone RP24-273F21, complete sequence. ----isReversed: 0 ----hitSequence: UGUCUUGUCAACAGUGUUUGGAAGGAA hit 34 : 90018 90044 (fwd) 22.44 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :: CU+ UCAACAGUGUUUGG AG :: 90018 UGUCUU--GUCAACAGUGUUUGGA-AGGAA 90044 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6303,sp|AC122863.4|AC122863 Mus musculus chromosome 7 clone RP23-142A14, complete sequence. ----isReversed: 1 ----hitSequence: CUUGCCUUCAGCAGUGCCUGGAGAAAU hit 35 : 16152 16126 (rev) 22.42 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU :C UUCA:CAGUG+:UGGA : AA 210450 CUUGCC--UUCAGCAGUGCCUGGA-GAAAU 210476 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6451,sp|AC123859.4|AC123859 Mus musculus chromosome 3 clone RP23-346B13, complete sequence. ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGGACGAAAC hit 36 : 49119 49148 (fwd) 30.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U :+GCUUCAACAGUGUUUGGAC: A:: 49119 UGUCUUGCUUCAACAGUGUUUGGACGAAAC 49148 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6563,sp|AC124390.4|AC124390 Mus musculus chromosome 12 clone RP24-434C11, complete sequence. ----isReversed: 0 ----hitSequence: AUUCUCGCAGCAUCAGUGCCUGCUUAGAAA hit 37 : 139592 139621 (fwd) 25.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUCUCGC::CA CAGUG+ UG:: AGAA 139592 AUUCUCGCAGCAUCAGUGCCUGCUUAGAAA 139621 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6888,sp|AC125229.3|AC125229 Mus musculus chromosome 5 clone RP23-45P1, complete sequence. ----isReversed: 0 ----hitSequence: GUUUCUGCUUCAACAGUGUUUGAACUGAGC hit 38 : 103775 103804 (fwd) 25.50 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U+ +GCU:CAACAGUGUUUG:AC +A : 103775 GUUUCUGCUUCAACAGUGUUUGAACUGAGC 103804 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #7042,sp|AC126676.3|AC126676 Mus musculus chromosome 7 clone RP23-445H7, complete sequence. ----isReversed: 0 ----hitSequence: UCUUUUGGUAACAGUGUUUACCAGAGC hit 39 : 158436 158462 (fwd) 24.58 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U+U+ :::AACAGUGUUU::: A+A:: 158436 UCUUUU--GGUAACAGUGUUUACC-AGAGC 158462 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #7106,sp|AC127282.3|AC127282 Mus musculus chromosome 5 clone RP23-318O24, complete sequence. ----isReversed: 0 ----hitSequence: AUUCUUGUCAACACUGCUUGACCAGAAA hit 40 : 76836 76863 (fwd) 22.51 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUCU+ ::CAACA UG+UUG::CAGAA 76836 AUUCUU--GUCAACACUGCUUGACCAGAAA 76863 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #7312,sp|AC130215.3|AC130215 Mus musculus chromosome 6 clone RP23-286E1, complete sequence. ----isReversed: 0 ----hitSequence: CGUCUUGCUUCAACAGUGUUUCUACAGAAC hit 41 : 6453 6482 (fwd) 23.68 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UCU+GCU AACAGUGUUU ACAGA: 6453 CGUCUUGCUUCAACAGUGUUUCUACAGAAC 6482 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #14162,sp|AF171078.1|AF171078 Mus musculus erythroid-specific 5-aminolevulinate synthase, promoter region. ----isReversed: 0 ----hitSequence: UGGUUCGUCCUCAGUGCAGGGCAACAG hit 42 : 1416 1442 (fwd) 23.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 1416 UGGUUC--GUCCUCAGUGCAGGGC-AACAG 1442 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #14342,sp|AF176694.1|AF176694 Mus musculus neighbor of Punc e11 protein (Nope) mRNA, complete cds. ----isReversed: 1 ----hitSequence: GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC hit 43 : 3322 3293 (rev) 22.40 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GC :CA:CAGUGU:UG: C:G::: 2855 GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC 2884 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #14641,sp|AF184111.1|AF184111 Mus musculus KID1 (Kid1) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCUCUCUGCAGCAGUGUGUGCUAGAAA hit 44 : 2247 2273 (fwd) 22.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC :CA:CAGUGU:UG: AGA:: 2247 UCUCUC--UGCAGCAGUGUGUGCU-AGAAA 2273 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #18978,sp|AF321235.1|AF321235 Mus musculus chromosome 7-E3 B4 olfactory receptor gene, partial cds; and B5 olfactory receptor and B6 olfactory receptor genes ----isReversed: 0 ----hitSequence: AUUCUCUUUAACAAUGUUUGAACAGAAU hit 45 : 27339 27366 (fwd) 22.08 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUCUC U: AACA UGUUU :ACAGAA: 27339 AUUCUC--UUUAACAAUGUUUGAACAGAAU 27366 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23742,sp|AK122535.1|AK122535 Mus musculus mRNA for mKIAA1628 protein. ----isReversed: 1 ----hitSequence: GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC hit 46 : 3450 3421 (rev) 22.40 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GC :CA:CAGUGU:UG: C:G::: 2852 GGGCUUGCAGCAGCAGUGUCUGCCCGGUUC 2881 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24071,sp|AL596185.12|AL596185 Mouse DNA sequence from clone RP23-172M21 on chromosome 11 ----isReversed: 1 ----hitSequence: UCCUCUGCUUCCACAGUGCUGGGACUGAAG hit 47 : 105145 105116 (rev) 22.08 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U::+ +GCUUC:ACAGUG+U:GGAC +::G 143059 UCCUCUGCUUCCACAGUGCUGGGACUGAAG 143088 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24152,sp|AL604062.15|AL604062 Mouse DNA sequence from clone RP23-104B6 on chromosome 11 ----isReversed: 1 ----hitSequence: UGUCUUACUUCAACAGUGUUUGGACAGGAC hit 48 : 181653 181624 (rev) 26.70 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :: CU+ CUUCAACAGUGUUUGGACAG :: 34858 UGUCUUACUUCAACAGUGUUUGGACAGGAC 34887 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24287,sp|AL607145.28|AL607145 Mouse DNA sequence from clone RP23-230I5 on chromosome 4 ----isReversed: 0 ----hitSequence: UGUCUCUUUAAAAGUGCUUAGAGGAAA hit 49 : 50364 50390 (fwd) 22.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:C UU:AA AGUG+UU:GA :GA:: 50364 UGUCUC--UUUAAAAGUGCUUAGA-GGAAA 50390 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24415,sp|AL627328.17|AL627328 Mouse DNA sequence from clone RP23-299J22 on chromosome 4 ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 50 : 145578 145607 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 145578 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 145607 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24472,sp|AL645545.8|AL645545 Mouse DNA sequence from clone RP23-203J4 on chromosome X ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAAUGCUUGAACUGAAC hit 51 : 151409 151380 (rev) 26.34 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC +GCU:CAACA UG+UUG:AC GAA: 29835 UUUCCUGCUUCAACAAUGCUUGAACUGAAC 29864 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24621,sp|AL645948.10|AL645948 Mouse DNA sequence from clone RP23-298M7 on chromosome 11 ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 52 : 53380 53409 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 53380 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 53409 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24624,sp|AL645962.22|AL645962 Mouse DNA sequence from clone RP23-217L7 on chromosome 11 ----isReversed: 0 ----hitSequence: UCUCUCUGCAGCAGUGUGUGCUAGAAA hit 53 : 56867 56893 (fwd) 22.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC :CA:CAGUGU:UG: AGA:: 56867 UCUCUC--UGCAGCAGUGUGUGCU-AGAAA 56893 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24782,sp|AL663066.12|AL663066 Mouse DNA sequence from clone RP23-416K12 on chromosome 11 ----isReversed: 1 ----hitSequence: UUUUUUUUCAGCAGUGACUGAAACAAG hit 54 : 45477 45451 (rev) 24.66 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU U+ U:CA:CAGUG :UG:A A AAG 115113 UUUUUU--UUCAGCAGUGACUGAA-ACAAG 115139 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24942,sp|AL670169.9|AL670169 Mouse DNA sequence from clone RP23-198C2 on chromosome X ----isReversed: 1 ----hitSequence: UAUCUUGCUUCAACAGUGUUUGGAUGGAAC hit 55 : 145075 145046 (rev) 30.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : UC:+GCUUCAACAGUGUUUGGA :GA : 6624 UAUCUUGCUUCAACAGUGUUUGGAUGGAAC 6653 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25138,sp|AL671993.7|AL671993 Mouse DNA sequence from clone RP23-428E5 on chromosome X ----isReversed: 1 ----hitSequence: UAUCUUGCUUCAAAAGUGUUUGGACAGAAC hit 56 : 46182 46153 (rev) 28.20 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : UCU+GCUUCAA AGUGUUUGGACAGA : 147925 UAUCUUGCUUCAAAAGUGUUUGGACAGAAC 147954 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25228,sp|AL672140.7|AL672140 Mouse DNA sequence from clone RP23-13O17 on chromosome 11 ----isReversed: 1 ----hitSequence: UUUUUUUUAAACAGUUUUUUGAGAAAG hit 57 : 46822 46796 (rev) 23.59 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU::+ UU:AACAGU UUU:GA ::AAG 88573 UUUUUU--UUAAACAGUUUUUUGA-GAAAG 88599 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25522,sp|AL714024.31|AL714024 Mouse DNA sequence from clone RP23-102H7 on chromosome 5 ----isReversed: 1 ----hitSequence: UCUCUUGUUCAGCAGUGUAUGGAGGAAA hit 58 : 182442 182415 (rev) 23.20 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+G UUCA:CAGUGU:UGGA :GA:: 31078 UCUCUUG-UUCAGCAGUGUAUGGA-GGAAA 31105 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25944,sp|AL772245.7|AL772245 Mouse DNA sequence from clone RP23-332K6 on chromosome 4 ----isReversed: 0 ----hitSequence: UUGUUUUUCAUCAGUGCCUGAAAACAA hit 59 : 4298 4324 (fwd) 22.14 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U::U+ U:CA CAGUG+ UG:A A::A: 4298 UUGUUU--UUCAUCAGUGCCUGAA-AACAA 4324 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #26368,sp|AL808140.5|AL808140 Mouse DNA sequence from clone RP23-147K5 on chromosome X ----isReversed: 0 ----hitSequence: UGGUUCGUCCUCAGUGCAGGGCAACAG hit 60 : 158768 158794 (fwd) 23.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 158768 UGGUUC--GUCCUCAGUGCAGGGC-AACAG 158794 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #26754,sp|AL845291.5|AL845291 Mouse DNA sequence from clone RP23-1O11 on chromosome 2 ----isReversed: 1 ----hitSequence: UGUCUUGUUUCAACAGUGUUUGGACAAAAC hit 61 : 82239 82210 (rev) 29.14 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U U+G UUCAACAGUGUUUGGACA A:: 127676 UGUCUUGUUUCAACAGUGUUUGGACAAAAC 127705 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #27073,sp|AL928893.10|AL928893 Mouse DNA sequence from clone RP23-55I14 on chromosome 2 ----isReversed: 0 ----hitSequence: UUGCUUUUAAAUAGUGUUUUGAGGCAG hit 62 : 80521 80547 (fwd) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU:C:+ UU:AA AGUGUUU:GA :G:AG 80521 UUGCUU--UUAAAUAGUGUUUUGA-GGCAG 80547 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #27536,sp|AL954855.8|AL954855 Mouse DNA sequence from clone RP23-211L10 on chromosome X ----isReversed: 1 ----hitSequence: UGCCUUGCUUCAAUAGUGUUUGAACGGAAC hit 63 : 4754 4725 (rev) 23.31 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::C:+GCU:CAA AGUGUUUG:AC:G::: 83157 UGCCUUGCUUCAAUAGUGUUUGAACGGAAC 83186 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #38178,sp|BC012314.1|BC012314 Mus musculus ferritin heavy chain, mRNA (cDNA clone MGC:19422 IMAGE:3488821), complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 64 : 7 36 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 7 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 36 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #39861,sp|BC019840.1|BC019840 Mus musculus ferritin light chain 1, mRNA (cDNA clone MGC:29974 IMAGE:5123770), complete cds. ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGAACGGAAC hit 65 : 11 40 (fwd) 33.82 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCU:CAACAGUGUUUG:AC:GA:: 11 UGUCUUGCUUCAACAGUGUUUGAACGGAAC 40 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #40163,sp|BC021386.1|BC021386 Mus musculus, RIKEN cDNA 8430406I07 gene, clone MGC:29141 IMAGE:5064253, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 66 : 30 59 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 30 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 59 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #48859,sp|BC050843.1|BC050843 Mus musculus zinc finger protein 354A, mRNA (cDNA clone MGC:59375 IMAGE:6506256), complete cds. ----isReversed: 0 ----hitSequence: UCUCUCUGCAGCAGUGUGUGCUAGAAA hit 67 : 2285 2311 (fwd) 22.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC :CA:CAGUGU:UG: AGA:: 2285 UCUCUC--UGCAGCAGUGUGUGCU-AGAAA 2311 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #50396,sp|BC054522.1|BC054522 Mus musculus transferrin receptor, mRNA (cDNA clone MGC:62189 IMAGE:6406097), complete cds. ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 68 : 3166 3192 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 3166 UUUAUC--AGUGACAGAGUUCACU-AUAAA 3192 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #50396,sp|BC054522.1|BC054522 Mus musculus transferrin receptor, mRNA (cDNA clone MGC:62189 IMAGE:6406097), complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 69 : 3225 3251 (fwd) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 3225 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 3251 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #50396,sp|BC054522.1|BC054522 Mus musculus transferrin receptor, mRNA (cDNA clone MGC:62189 IMAGE:6406097), complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 70 : 3604 3630 (fwd) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 3604 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 3630 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #50396,sp|BC054522.1|BC054522 Mus musculus transferrin receptor, mRNA (cDNA clone MGC:62189 IMAGE:6406097), complete cds. ----isReversed: 0 ----hitSequence: UAUAUCGGAGACAGUGAUCUCCAUAUG hit 71 : 3669 3695 (fwd) 26.17 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U+U:UC ::::ACAGUG U:::: A:A+G 3669 UAUAUC--GGAGACAGUGAUCUCC-AUAUG 3695 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #50396,sp|BC054522.1|BC054522 Mus musculus transferrin receptor, mRNA (cDNA clone MGC:62189 IMAGE:6406097), complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 72 : 3716 3742 (fwd) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 3716 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 3742 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #51360,sp|BX255946.6|BX255946 Mouse DNA sequence from clone RP23-82A14 on chromosome 4 ----isReversed: 1 ----hitSequence: UGUUCUGCUUCAACAGUGUUUGGACUGAAC hit 73 : 23507 23478 (rev) 29.00 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U+ +GCUUCAACAGUGUUUGGAC +A:: 92688 UGUUCUGCUUCAACAGUGUUUGGACUGAAC 92717 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #56136,sp|M15268.1|MMALA Mouse 5-aminolevulinic acid synthase mRNA, 3' end. ----isReversed: 0 ----hitSequence: UGGUUCGUCCUCAGUGCAGGGCAACAG hit 74 : 1 27 (fwd) 23.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 1 UGGUUC--GUCCUCAGUGCAGGGC-AACAG 27 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #56138,sp|M63244.1|MMALASE Mus musculus amino levulinate synthase mRNA, complete cds. ----isReversed: 0 ----hitSequence: UGGUUCGUCCUCAGUGCAGGGCAACAG hit 75 : 13 39 (fwd) 23.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 13 UGGUUC--GUCCUCAGUGCAGGGC-AACAG 39 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59189,sp|M60170.1|MMFERHC Mouse ferritin heavy chain gene, complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 76 : 230 259 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 230 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 259 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59190,sp|X52561.1|MMFERHG Mouse gene for ferritin H subunit ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 77 : 968 997 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 968 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 997 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59192,sp|L39879.1|MMFERLSUB Mus musculus ferritin L-subunit gene exons 1-4, complete cds. ----isReversed: 0 ----hitSequence: GUACUUGCUUCAACAGUGUUUGAACGGAAC hit 78 : 1190 1219 (fwd) 30.99 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUGUUUG:AC:G A: 1190 GUACUUGCUUCAACAGUGUUUGAACGGAAC 1219 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59195,sp|M73680.1|MMFERRH Mus musculus (clone pMHFY2) ferritin H gene, promoter region. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 79 : 968 997 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 968 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 997 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #65066,sp|L77247.1|MMK1ZF Mus musculus zinc finger protein (kid-1) gene, complete cds. ----isReversed: 0 ----hitSequence: UCUCUCUGCAGCAGUGUGUGCUAGAAA hit 80 : 2149 2175 (fwd) 22.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC :CA:CAGUGU:UG: AGA:: 2149 UCUCUC--UGCAGCAGUGUGUGCU-AGAAA 2175 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #72498,sp|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7 ----isReversed: 1 ----hitSequence: UGUCUUGCUUCAACCGUGUUUGGACGGAAC hit 81 : 120810 120781 (rev) 29.14 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAAC GUGUUUGGAC:GA:: 160191 UGUCUUGCUUCAACCGUGUUUGGACGGAAC 160220 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #74127,sp|AJ426432.1|MMU426432 Mus musculus partial mRNA for transferrin receptor 1 (TFR1 gene) ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 82 : 1154 1180 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 1154 UUUAUC--AGUGACAGAGUUCACU-AUAAA 1180 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #74127,sp|AJ426432.1|MMU426432 Mus musculus partial mRNA for transferrin receptor 1 (TFR1 gene) ----isReversed: 0 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 83 : 1214 1240 (fwd) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 1214 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 1240 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #74127,sp|AJ426432.1|MMU426432 Mus musculus partial mRNA for transferrin receptor 1 (TFR1 gene) ----isReversed: 0 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 84 : 1593 1619 (fwd) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 1593 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 1619 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #74127,sp|AJ426432.1|MMU426432 Mus musculus partial mRNA for transferrin receptor 1 (TFR1 gene) ----isReversed: 0 ----hitSequence: UAUAUCGGAGACAGUGAUCUCCAUAUG hit 85 : 1658 1684 (fwd) 26.17 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U+U:UC ::::ACAGUG U:::: A:A+G 1658 UAUAUC--GGAGACAGUGAUCUCC-AUAUG 1684 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #74127,sp|AJ426432.1|MMU426432 Mus musculus partial mRNA for transferrin receptor 1 (TFR1 gene) ----isReversed: 0 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 86 : 1705 1731 (fwd) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 1705 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 1731 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/org.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/phg.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #2024,sp|AB020745.1|AB020745 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7. ----isReversed: 0 ----hitSequence: UUUACUAUAAACAGUGCUUUGGAUAAG hit 87 : 5205 5231 (fwd) 22.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU: + U:AACAGUG+UU:G :AAG 5205 UUUACU--AUAAACAGUGCUUUGG-AUAAG 5231 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #6901,sp|AB081316.2|AB081316 Oryza sativa (japonica cultivar-group) retrotransposon Karma DNA, complete sequence. ----isReversed: 0 ----hitSequence: GCUUUCUUCAACAAUGCUUGGAACAAC hit 88 : 4022 4048 (fwd) 22.58 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U UC UUCAACA UG+UUGGA A A:: 4022 GCUUUC--UUCAACAAUGCUUGGA-ACAAC 4048 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #8827,sp|AC007019.5|AC007019 Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete sequence. ----isReversed: 1 ----hitSequence: ACUCUUUGCCACAGUGCUUGCAUGAAU hit 89 : 48617 48591 (rev) 22.09 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC + U:C ACAGUG+U G:A GA:: 59232 ACUCUU--UGCCACAGUGCUUGCA-UGAAU 59258 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #9192,sp|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence. ----isReversed: 0 ----hitSequence: GUUUUUGGUUUCACAGUGUUGAGAAAAAAC hit 90 : 85343 85372 (fwd) 24.19 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:U+G UU::ACAGUGUU::GA A:AA: 85343 GUUUUUGGUUUCACAGUGUUGAGAAAAAAC 85372 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #91833,sp|AK106949.1|AK106949 Oryza sativa (japonica cultivar-group) cDNA clone:002-119-E02, full insert sequence. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGGACGGAAC hit 91 : 22 51 (fwd) 36.20 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUGUUUGGAC:GAA: 22 GUUCUUGCUUCAACAGUGUUUGGACGGAAC 51 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #99125,sp|AP002971.2|AP002971 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05. ----isReversed: 0 ----hitSequence: GCUUUUGCUGAAACAUUGUUUUCAUAUAAC hit 92 : 106140 106169 (fwd) 22.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U U+GCU::AACA UGUUU::A A A:: 106140 GCUUUUGCUGAAACAUUGUUUUCAUAUAAC 106169 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #152910,sp|AY136326.1|AY136326 Arabidopsis thaliana putative protein (At5g48390) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUACUAUAAACAGUGCUUUGGAUAAG hit 93 : 522 548 (fwd) 22.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU: + U:AACAGUG+UU:G :AAG 522 UUUACU--AUAAACAGUGCUUUGG-AUAAG 548 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #172420,sp|BT000104.1|BT000104 Arabidopsis thaliana putative protein (At5g48390) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUACUAUAAACAGUGCUUUGGAUAAG hit 94 : 316 342 (fwd) 22.29 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUU: + U:AACAGUG+UU:G :AAG 316 UUUACU--AUAAACAGUGCUUUGG-AUAAG 342 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #181796,sp|AL731761.2|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of ----isReversed: 1 ----hitSequence: UGUAUUGUGGUAACAGUGCUUACUUAUAUC hit 95 : 46431 46402 (rev) 23.61 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:U+G :::AACAGUG+UU::: A:A:: 75730 UGUAUUGUGGUAACAGUGCUUACUUAUAUC 75759 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #198736,sp|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21. ----isReversed: 0 ----hitSequence: AAUUUUGGCAACUGUGUUUGCCAAAAU hit 96 : 151654 151680 (fwd) 22.08 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U:U+ ::CAAC GUGUUUG:: A:A : 151654 AAUUUU--GGCAACUGUGUUUGCC-AAAAU 151680 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro01.dat.fasta.gz ----sequence: #21108,sp|AE006348.1|AE006348 Lactococcus lactis subsp. lactis IL1403 section 110 of 218 of the complete genome. ----isReversed: 1 ----hitSequence: UUUGUCAGCAACAGUACUUGCUAUAAC hit 97 : 2642 2616 (rev) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU UC ::CAACAGU +UUG:: A AA: 8200 UUUGUC--AGCAACAGUACUUGCU-AUAAC 8226 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro01.dat.fasta.gz ----sequence: #26032,sp|AE011324.1|AE011324 Leptospira interrogans serovar lai str. 56601 chromosome I, section 133 of 397 of the complete sequence. ----isReversed: 1 ----hitSequence: UUUAUUCUACAACAGUGUUUGAACUUAAA hit 98 : 220 192 (rev) 22.34 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU: + CU:CAACAGUGUUUG:AC :AA: 7116 UUUAUU-CUACAACAGUGUUUGAACUUAAA 7144 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro02.dat.fasta.gz ----sequence: #24414,sp|AF372655.1|AF372655 Rhizobium leguminosarum bv. trifolii CpsF (cpsF) gene, partial cds; and putative succinoglycan biosynthesis transport protein, ----isReversed: 1 ----hitSequence: CUUCUCGUCAGCAGCGCCUGACGGAAA hit 99 : 11016 10990 (rev) 22.06 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUC:C ::CA:CAG G+:UG:: :GAA 416 CUUCUC--GUCAGCAGCGCCUGAC-GGAAA 442 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro04.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro05.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #1128,sp|AB073371.1|AB073371 Cavia porcellus mRNA for ferritin heavy chain, complete cds. ----isReversed: 0 ----hitSequence: UCUCCUGCUUCAACAGUGCUUGGACGGAGC hit 100 : 5 34 (fwd) 32.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUG+UUGGAC:GA:: 5 UCUCCUGCUUCAACAGUGCUUGGACGGAGC 34 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #1474,sp|AC112532.5|AC112532 Rattus norvegicus 9 BAC CH230-20N15 (Children's Hospital Oakland Research Institute) complete sequence. ----isReversed: 1 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGGAAGGAAC hit 101 : 89341 89312 (rev) 30.53 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGA :GA:: 49221 UGUCUUGCUUCAACAGUGUUUGGAAGGAAC 49250 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #4357,sp|AF186775.1|AF186775 Rattus norvegicus 5-aminolevulinate synthase (ALS2) mRNA, partial cds. ----isReversed: 0 ----hitSequence: UGGUUCGUCCUCAGUGCAGGGCAACAG hit 102 : 17 43 (fwd) 23.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 17 UGGUUC--GUCCUCAGUGCAGGGC-AACAG 43 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #10381,sp|M99692.1|CGFERR Hamster iron binding protein (ferretin) mRNA. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 103 : 7 36 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 7 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 36 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #15983,sp|M18051.1|RNFERA1 Rat ferritin heavy subunit gene, partial exon X. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGAACGGAAC hit 104 : 206 235 (fwd) 34.92 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 206 UUUCCUGCUUCAACAGUGCUUGAACGGAAC 235 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #15988,sp|J02741.1|RNFERL1 Rat ferritin light chain gene, complete cds. ----isReversed: 0 ----hitSequence: UAUCUUGCUUCAACAGUGUUUGGACGGAAC hit 105 : 400 429 (fwd) 32.32 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : UC:+GCUUCAACAGUGUUUGGAC:GA : 400 UAUCUUGCUUCAACAGUGUUUGGACGGAAC 429 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #15991,sp|M18812.1|RNFERUTR Rat ferritin light subunit 5' untranslated region (UTR). ----isReversed: 0 ----hitSequence: UAUCUUGCUUCAACAGUGUUUGGACGGAAC hit 106 : 20 49 (fwd) 32.32 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : UC:+GCUUCAACAGUGUUUGGAC:GA : 20 UAUCUUGCUUCAACAGUGUUUGGACGGAAC 49 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20681,sp|M58040.1|RNTRFR Rat transferrin receptor mRNA, 3' end. ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 107 : 2819 2845 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 2819 UUUAUC--AGUGACAGAGUUCACU-AUAAA 2845 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20681,sp|M58040.1|RNTRFR Rat transferrin receptor mRNA, 3' end. ----isReversed: 0 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 108 : 2869 2895 (fwd) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 2869 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 2895 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20681,sp|M58040.1|RNTRFR Rat transferrin receptor mRNA, 3' end. ----isReversed: 0 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 109 : 3244 3270 (fwd) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 3244 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 3270 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20681,sp|M58040.1|RNTRFR Rat transferrin receptor mRNA, 3' end. ----isReversed: 0 ----hitSequence: UAUAUCGGAGACAGUGACCUCCAUAUG hit 110 : 3309 3335 (fwd) 22.33 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U+U:UC :::: CAGUG :::: A:A+G 3309 UAUAUC--GGAGACAGUGACCUCC-AUAUG 3335 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20681,sp|M58040.1|RNTRFR Rat transferrin receptor mRNA, 3' end. ----isReversed: 0 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 111 : 3356 3382 (fwd) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 3356 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 3382 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrl.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/vrl.dat.fasta.gz ----sequence: #49892,sp|AF227196.1|AF227196 Gill-associated virus ORF1a polyprotein (ORF1a) gene, complete cds; and ORF1ab replicase polyprotein (ORF1b) gene, partial cds. ----isReversed: 1 ----hitSequence: GUUGUUUGGGACAGUGAUCUCAAGAAC hit 112 : 7211 7185 (rev) 22.61 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU U+ U: :ACAGUG U: :A A AA: 12879 GUUGUU--UGGGACAGUGAUCUCA-AGAAC 12905 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #14314,sp|AF266195.1|AF266195 Gillichthys mirabilis ferritin middle subunit mRNA, complete cds. ----isReversed: 0 ----hitSequence: AUUCUUGCUUCAACAGUGUUUGAACGGAAU hit 113 : 14 43 (fwd) 35.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 14 AUUCUUGCUUCAACAGUGUUUGAACGGAAU 43 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #15515,sp|AF292032.1|AF292032 Danio rerio HER-7 protein (her-7) and HER-1 protein (her-1) genes, complete cds. ----isReversed: 1 ----hitSequence: AUUGUUUGCAACAGUGCAUGCAACAAU hit 114 : 15970 15944 (rev) 23.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU U+ U:CA CAGUG+ UG:A A AA: 4506 AUUGUU--UGCAACAGUGCAUGCA-ACAAU 4532 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #15689,sp|AF295373.1|AF295373 Danio rerio ferritin heavy chain (fth1) mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUACCUGCUUCAACAGUGCUUGAACGGCAA hit 115 : 6 35 (fwd) 30.42 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUG+UUG:AC:G A: 6 UUACCUGCUUCAACAGUGCUUGAACGGCAA 35 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #17173,sp|AF338763.1|AF338763 Oncorhynchus nerka ferritin-H subunit mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUACCUGCUUCAACAGUGCUUGAACGGCAA hit 116 : 11 40 (fwd) 30.42 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUG+UUG:AC:G A: 11 UUACCUGCUUCAACAGUGCUUGAACGGCAA 40 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23037,sp|AF538970.1|AF538970 Xenopus laevis ferritin heavy chain mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCCUGCUUCAACAGUGAUUGAACGGAAC hit 117 : 25 54 (fwd) 33.78 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG UUG:AC:GAA: 25 GUUCCUGCUUCAACAGUGAUUGAACGGAAC 54 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23038,sp|AF538971.1|AF538971 Xenopus laevis ferritin light chain mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGCUUGAACGGAAC hit 118 : 13 42 (fwd) 34.93 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 13 GUUCUUGCUUCAACAGUGCUUGAACGGAAC 42 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24004,sp|AL807827.11|AL807827 Zebrafish DNA sequence from clone CH211-220J6 ----isReversed: 1 ----hitSequence: GGUUUUAUCAACAGUGAUUGAUGAAUC hit 119 : 47635 47609 (rev) 22.76 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U::+ ::CAACAGUG UUG:: ::A:: 151507 GGUUUU--AUCAACAGUGAUUGAU-GAAUC 151533 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24554,sp|AL953915.4|AL953915 Zebrafish DNA sequence from clone CH211-210F6 ----isReversed: 0 ----hitSequence: AUUAUUUUGCACAGUGCUGUGAAUAAA hit 120 : 31746 31772 (fwd) 24.21 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU:U+ UU :ACAGUG+U: GA A:AA 31746 AUUAUU--UUGCACAGUGCUGUGA-AUAAA 31772 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #30635,sp|AY260753.1|AY260753 Oreochromis mossambicus ferritin heavy subunit mRNA, partial cds. ----isReversed: 0 ----hitSequence: UUACCUGCUUCAACAGUGCUUGAACGGCAA hit 121 : 2 31 (fwd) 30.42 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUG+UUG:AC:G A: 2 UUACCUGCUUCAACAGUGCUUGAACGGCAA 31 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #32817,sp|BC044685.1|BC044685 Xenopus laevis, clone MGC:53349 IMAGE:5571031, mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCCUGCUUCAACAGUGAUUGAACGGAAC hit 122 : 27 56 (fwd) 33.78 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG UUG:AC:GAA: 27 GUUCCUGCUUCAACAGUGAUUGAACGGAAC 56 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #32857,sp|BC044961.1|BC044961 Xenopus laevis, clone MGC:52598 IMAGE:5543148, mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 123 : 14 43 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 14 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 43 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #33071,sp|BC045278.1|BC045278 Danio rerio ferritin, heavy polypeptide 1, mRNA (cDNA clone MGC:55220 IMAGE:3815619), complete cds. ----isReversed: 0 ----hitSequence: UUACCUGCUUCAACAGUGCUUGAACGGCAA hit 124 : 39 68 (fwd) 30.42 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U C:+GCU:CAACAGUG+UUG:AC:G A: 39 UUACCUGCUUCAACAGUGCUUGAACGGCAA 68 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #33632,sp|BC046680.1|BC046680 Xenopus laevis, clone MGC:53066 IMAGE:5541973, mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGCUUGAACGGAAC hit 125 : 8 37 (fwd) 34.93 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG+UUG:AC:GAA: 8 GUUCUUGCUUCAACAGUGCUUGAACGGAAC 37 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36387,sp|BX004964.9|BX004964 Zebrafish DNA sequence from clone DKEY-7I4 ----isReversed: 1 ----hitSequence: UCUCUCGGAAACAGUGUCUUACAGAAC hit 126 : 55973 55947 (rev) 22.60 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC : :A CAGUGU U: : AGA:: 155046 UCUCUC--GGAAACAGUGUCUUAC-AGAAC 155072 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36634,sp|BX294670.6|BX294670 Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16 ----isReversed: 0 ----hitSequence: UGUAUCUCGACAACAGUGUUUGUCCAUAUA hit 127 : 66132 66161 (fwd) 25.47 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:UC C::CAACAGUGUUUG::CA:A:: 66132 UGUAUCUCGACAACAGUGUUUGUCCAUAUA 66161 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #40732,sp|X13753.1|GGCTR3 Chicken mRNA for transferrin receptor 3'-noncoding region ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGCGUUCACUAUAAA hit 128 : 830 856 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 830 UUUAUC--AGUGACAGCGUUCACU-AUAAA 856 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #40732,sp|X13753.1|GGCTR3 Chicken mRNA for transferrin receptor 3'-noncoding region ----isReversed: 0 ----hitSequence: AUUAUCGGGGGCAGUGUCUUCCAUAAU hit 129 : 1371 1397 (fwd) 24.76 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: ::CAGUGU:: :: A:AA: 1371 AUUAUC--GGGGGCAGUGUCUUCC-AUAAU 1397 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #40732,sp|X13753.1|GGCTR3 Chicken mRNA for transferrin receptor 3'-noncoding region ----isReversed: 0 ----hitSequence: UAUAUCGGAGGCAGUGACCUCCAUAUG hit 130 : 1434 1460 (fwd) 23.80 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U+U:UC :::::CAGUG ::::: A:A+G 1434 UAUAUC--GGAGGCAGUGACCUCC-AUAUG 1460 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #40732,sp|X13753.1|GGCTR3 Chicken mRNA for transferrin receptor 3'-noncoding region ----isReversed: 0 ----hitSequence: AUUAUCGGGGACAGUGUUUCCCAUAAU hit 131 : 1481 1507 (fwd) 27.23 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: :ACAGUGUU: :: A:AA: 1481 AUUAUC--GGGGACAGUGUUUCCC-AUAAU 1507 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #40919,sp|M16343.1|GGFERH Chicken ferritin H-subunit gene, complete cds. ----isReversed: 0 ----hitSequence: GUUCCUGCGUCAACAGUGCUUGGACGGAAC hit 132 : 1306 1335 (fwd) 32.06 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GC UCAACAGUG+UUGG C:GAA: 1306 GUUCCUGCGUCAACAGUGCUUGGACGGAAC 1335 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42213,sp|Y14698.1|GGRNAFHCP Gallus gallus mRNA for ferritin H chain protein ----isReversed: 0 ----hitSequence: GUUCCUGCGUCAACAGUGCUUGGACGGAAC hit 133 : 32 61 (fwd) 32.06 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GC UCAACAGUG+UUGG C:GAA: 32 GUUCCUGCGUCAACAGUGCUUGGACGGAAC 61 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #45211,sp|D86625.1|OMD625 Oncorhynchus mykiss mRNA for ferritin H-1, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGUUUCAACAGUGAUUGAACGGAAC hit 134 : 6 35 (fwd) 31.33 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+G U:CAACAGUG UUG:AC:GAA: 6 GUUCUUGUUUCAACAGUGAUUGAACGGAAC 35 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #46664,sp|M15655.1|RCFERH Frog (Rana catesbeiana) apoferritin higher subunit, mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 135 : 24 53 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 24 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 53 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #46667,sp|J02723.1|RCFERPG Frog (Rana catesbeiana) apoferritin pseudogene. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUAUUUGAACGGAAC hit 136 : 161 190 (fwd) 30.74 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGU UUUG:AC:GAA: 161 GUUCUUGCUUCAACAGUAUUUGAACGGAAC 190 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #46689,sp|M12120.1|RCRCFA Bull frog (R.catesbeiana) tadpole red cell ferritin mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 137 : 24 53 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 24 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 53 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47269,sp|S64727.1|S64727 ferritin [Xenopus laevis, XL2 cells, mRNA, 1388 nt]. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 138 : 502 531 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 502 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 531 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47430,sp|S77386.1|S77386 ferritin middle subunit [Salmo salar=Atlantic salmon, liver, mRNA, 1010 nt]. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGAUUGAACGGAAC hit 139 : 28 57 (fwd) 33.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUG UUG:AC:GAA: 28 GUUCUUGCUUCAACAGUGAUUGAACGGAAC 57 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51051,sp|M55010.1|XLFERHSU Xenopus laevis ferritin H subunit mRNA, complete cds. ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 140 : 7 36 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 7 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 36 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51052,sp|X51395.1|XLFERRIT Xenopus laevis mRNA for ferritin ----isReversed: 0 ----hitSequence: GUUCUUGCUUCAACAGUGUUUGAACGGAAC hit 141 : 167 196 (fwd) 35.49 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCU:CAACAGUGUUUG:AC:GAA: 167 GUUCUUGCUUCAACAGUGUUUGAACGGAAC 196 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #4221,sp|AB041512.1|AB041512 Homo sapiens genomic DNA, chromosome 6q21, clone:520L4. ----isReversed: 0 ----hitSequence: AUAAUUUUAAACAGUGUUUGAAAUUAU hit 142 : 99917 99943 (fwd) 22.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U :U+ U: AACAGUGUUU :A A: A: 99917 AUAAUU--UUAAACAGUGUUUGAA-AUUAU 99943 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #4270,sp|AB042030.1|AB042030 Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6. ----isReversed: 0 ----hitSequence: AUAAUUUUAAACAGUGUUUGAAAUUAU hit 143 : 14958 14984 (fwd) 22.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U :U+ U: AACAGUGUUU :A A: A: 14958 AUAAUU--UUAAACAGUGUUUGAA-AUUAU 14984 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #5848,sp|AB062402.1|AB062402 Homo sapiens OK/SW-cl.84 mRNA for ferritin-heavy polypeptide 1, complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 144 : 11 40 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 11 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 40 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #9594,sp|AC003025.1|AC003025 Human Chromosome 11p12.2 PAC clone pDJ466a11, complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 145 : 96822 96793 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 15488 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 15517 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #9672,sp|AC003678.1|AC003678 Homo sapiens Chromosome 11q12.2 PAC clone pDJ632c8, complete sequence. ----isReversed: 1 ----hitSequence: UCUCUCUUCCACAGUGUUGGGGAGACA hit 146 : 13322 13296 (rev) 22.75 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC UC:ACAGUGUU:GG AGA:: 63219 UCUCUC--UUCCACAGUGUUGGGG-AGACA 63245 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #9681,sp|AC003689.1|AC003689 Homo sapiens Chromosome 11q12.2 PAC clone pDJ1081b4 containing human mRNA for T-cell glycoprotein CD6, complete sequence. ----isReversed: 1 ----hitSequence: UCUCUCUUCCACAGUGUUGGGGAGACA hit 147 : 91473 91447 (rev) 22.75 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC UC:ACAGUGUU:GG AGA:: 46221 UCUCUC--UUCCACAGUGUUGGGG-AGACA 46247 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #9787,sp|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence. ----isReversed: 0 ----hitSequence: UUUUUCUUAAACAGUGUUUUGAAAAGA hit 148 : 59764 59790 (fwd) 25.41 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U:UC UU:AACAGUGUUU:GA A:A : 59764 UUUUUC--UUAAACAGUGUUUUGA-AAAGA 59790 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #34,sp|AC004548.1|AC004548 Homo sapiens PAC clone RP5-1182N3 from 7, complete sequence. ----isReversed: 0 ----hitSequence: UCUUUCUUAAACAUUGUUUUGAAAAAA hit 149 : 47613 47639 (fwd) 23.19 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:UC UU:AACA UGUUU:GA A:A:: 47613 UCUUUC--UUAAACAUUGUUUUGA-AAAAA 47639 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #576,sp|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence. ----isReversed: 1 ----hitSequence: UCUCCCAGCCUCAGUGUAGGCUGGAGG hit 150 : 6052 6026 (rev) 23.34 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:UC:C ::C::CAGUGU::G:: :GA:G 14937 UCUCCC--AGCCUCAGUGUAGGCU-GGAGG 14963 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #999,sp|AC005913.2|AC005913 Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 151 : 96843 96872 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 96843 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 96872 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1093,sp|AC006050.1|AC006050 Homo sapiens chromosome 17, clone hRPK.268_F_2, complete sequence. ----isReversed: 0 ----hitSequence: AUUAUUGACACUUAAACAGUGCUUUAAUAUAAU hit 152 : 67981 68013 (fwd) 22.86 bits <<<<<--...-<<<<<______>>>>>->>>>> 1 uuUcuCG...CuucaACAGUGuUuggaCagAag 30 :UU:U+G CU::AACAGUG+UU::A A:AA: 67981 AUUAUUGacaCUUAAACAGUGCUUUAAUAUAAU 68013 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1096,sp|AC006054.2|AC006054 Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACUGUGCUUGGACGGAAC hit 153 : 115529 115500 (rev) 30.24 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAAC GUG+UUGGAC:GAA: 28210 UUUCCUGCUUCAACUGUGCUUGGACGGAAC 28239 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1107,sp|AC006070.1|AC006070 Homo sapiens chromosome 17, clone hRPK.206_C_20, complete sequence. ----isReversed: 1 ----hitSequence: AUUCUUUGCAACAUUGUUUGCAAGAAU hit 154 : 121038 121012 (rev) 27.61 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUCU+ U:CAACA UGUUUG:A AGAA: 40950 AUUCUU--UGCAACAUUGUUUGCA-AGAAU 40976 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1119,sp|AC006112.4|AC006112 Homo sapiens chromosome 16 clone RP11-472H7, complete sequence. ----isReversed: 0 ----hitSequence: AUUUUCCUUGACAGUGCUCAAGAAAAU hit 155 : 60257 60283 (fwd) 22.75 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::ACAGUG+U::: A:AA: 60257 AUUUUC--CUUGACAGUGCUCAAG-AAAAU 60283 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1171,sp|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUCUUCUACAGUGAUGGGACAGAAA hit 156 : 64260 64287 (fwd) 24.81 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC UUC ACAGUG U GGACAGA:: 64260 UCUCUC--UUCUACAGUGAUGGGACAGAAA 64287 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1533,sp|AC007094.3|AC007094 Homo sapiens BAC clone RP11-289L12 from 7, complete sequence. ----isReversed: 0 ----hitSequence: AGUCUUGGAAACAGUGAUUUCUAGAAA hit 157 : 71278 71304 (fwd) 22.23 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UCU+ :::AACAGUG UU::: AGA: 71278 AGUCUU--GGAAACAGUGAUUUCU-AGAAA 71304 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1575,sp|AC007200.1|AC007200 Homo sapiens chromosome 5 Bac clone CTB-54K3, complete sequence. ----isReversed: 1 ----hitSequence: UUUAAUUCCCACAGUGUUGGUAAUAAC hit 158 : 29824 29798 (rev) 22.51 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU: + U C:ACAGUGUU:G A :AA: 69847 UUUAAU--UCCCACAGUGUUGGUA-AUAAC 69873 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #3793,sp|AC011488.7|AC011488 Homo sapiens chromosome 19 clone CTB-171N13, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCCACAGUGUUUGGAUGGAAC hit 159 : 20387 20416 (fwd) 28.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUC ACAGUGUU GGA :GA:: 20387 UCUCUUGCUUCCACAGUGUUUGGAUGGAAC 20416 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #3924,sp|AC011773.9|AC011773 Homo sapiens chromosome 8, clone RP11-219B4, complete sequence. ----isReversed: 0 ----hitSequence: AUUAUCUUUAACAGUGUUUAAAAUUAA hit 160 : 99308 99334 (fwd) 22.15 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U :UC U::AACAGUGUUU::A A: A 99308 AUUAUC--UUUAACAGUGUUUAAA-AUUAA 99334 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #3962,sp|AC011966.7|AC011966 Homo sapiens chromosome 15, clone RP11-285I14, complete sequence. ----isReversed: 0 ----hitSequence: UCUAUUUUAGACAGUUUUCUGAGUAAG hit 161 : 13498 13524 (fwd) 22.07 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U::+ UU::ACAGU UU::GA ::A:G 13498 UCUAUU--UUAGACAGUUUUCUGA-GUAAG 13524 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4371,sp|AC013565.10|AC013565 Homo sapiens chromosome 15, clone RP11-326A19, complete sequence. ----isReversed: 1 ----hitSequence: AGGCUCUGAAACAGUGCUUUCUAGCAU hit 162 : 56576 56550 (rev) 22.36 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :::CUC ::AACAGUG+UU:: AG::: 131671 AGGCUC--UGAAACAGUGCUUUCU-AGCAU 131697 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4415,sp|AC015463.7|AC015463 Homo sapiens, clone RP11-114I9, complete sequence. ----isReversed: 1 ----hitSequence: UCUAUUUUAGACAGUUUUCUGAGUAAG hit 163 : 7047 7021 (rev) 22.07 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U::+ UU::ACAGU UU::GA ::A:G 33824 UCUAUU--UUAGACAGUUUUCUGA-GUAAG 33850 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4785,sp|AC016877.11|AC016877 Homo sapiens chromosome 8, clone RP11-44N12, complete sequence. ----isReversed: 1 ----hitSequence: UCUACCUUCCACAGUGUUGGGAUUAUA hit 164 : 64045 64019 (rev) 22.27 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U: C UUC:ACAGUGUU:GGA :A:: 124549 UCUACC--UUCCACAGUGUUGGGA-UUAUA 124575 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4937,sp|AC018474.31|AC018474 Homo sapiens 12 BAC RP11-757E18 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: UUUCACAUGAACAGUGCUUAGUAGAAG hit 165 : 96788 96762 (rev) 22.74 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UUUC C :U AACAGUG+UU G: GAAG 75516 UUUCAC--AUGAACAGUGCUUAGU-AGAAG 75542 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #5785,sp|AC022332.16|AC022332 Homo sapiens 3 BAC RP11-627P8 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: AUUUUCUUCAUCAGUGUAUGGGAAAAU hit 166 : 1760 1786 (fwd) 25.81 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC UCA:CAGUGU:UGG A:AA: 1760 AUUUUC--UUCAUCAGUGUAUGGG-AAAAU 1786 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6119,sp|AC023644.6|AC023644 Homo sapiens chromosome 8, clone RP11-257P3, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 167 : 42849 42878 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 42849 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 42878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6270,sp|AC024382.7|AC024382 Homo sapiens chromosome 8, clone RP11-351C8, complete sequence. ----isReversed: 1 ----hitSequence: AUCACUGCUUCCACAGUGCUGGAACUUAAU hit 168 : 111638 111609 (rev) 24.13 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U:: +GCU:C:ACAGUG+U:G:AC ::A: 81962 AUCACUGCUUCCACAGUGCUGGAACUUAAU 81991 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6345,sp|AC024937.21|AC024937 Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 169 : 105699 105673 (rev) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 51500 UUUAUC--AGUGACAGAGUUCACU-AUAAA 51526 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6345,sp|AC024937.21|AC024937 Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 170 : 105649 105623 (rev) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 51550 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 51576 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6345,sp|AC024937.21|AC024937 Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 171 : 105245 105219 (rev) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 51954 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 51980 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6345,sp|AC024937.21|AC024937 Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: UGUAUCGGAGACAGUGAUCUCCAUAUG hit 172 : 105180 105154 (rev) 25.13 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U:UC ::::ACAGUG U:::: A:A:G 52019 UGUAUC--GGAGACAGUGAUCUCC-AUAUG 52045 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6345,sp|AC024937.21|AC024937 Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 173 : 105133 105107 (rev) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 52066 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 52092 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6725,sp|AC026367.14|AC026367 Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: AUUUUUUUUAACAGUGUUUAGACACAAA hit 174 : 93124 93151 (fwd) 22.52 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU U+ UU:AACAGUGUUU:GACA AA 93124 AUUUUU--UUUAACAGUGUUUAGACACAAA 93151 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6772,sp|AC026439.4|AC026439 Homo sapiens chromosome 5 clone CTD-2267H19, complete sequence. ----isReversed: 1 ----hitSequence: ACUUUUGUAAACAGUGUUUUGUAAACU hit 175 : 59909 59883 (rev) 22.79 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:U+ :U:AACAGUGUUU:G: A:A:: 45173 ACUUUU--GUAAACAGUGUUUUGU-AAACU 45199 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6888,sp|AC026785.4|AC026785 Homo sapiens chromosome 5 clone CTD-2139B15, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACAGAAC hit 176 : 25937 25966 (fwd) 32.45 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC +GCUUCAACAGUG+UUGGAC GAA: 25937 UUUCCUGCUUCAACAGUGCUUGGACAGAAC 25966 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6905,sp|AC026803.7|AC026803 Homo sapiens chromosome 19 clone CTD-2639E6, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 177 : 202668 202697 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 202668 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 202697 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #7840,sp|AC068792.31|AC068792 Homo sapiens 12 BAC RP11-771K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: CCUUACGCAGCAACAGUGCUUGCUUUGAAA hit 178 : 86467 86438 (rev) 22.01 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U+ CGC::CAACAGUG+UUG:: +A: 19811 CCUUACGCAGCAACAGUGCUUGCUUUGAAA 19840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8030,sp|AC069476.25|AC069476 Homo sapiens chromosome 11 clone b430h11 map 11, complete sequence. ----isReversed: 1 ----hitSequence: UUUCUUCUUCAACAGUGUUUGGAUGGAAC hit 179 : 36991 36963 (rev) 28.48 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+ CUUCAACAGUGUUUGGA :GAA: 147834 UUUCUU-CUUCAACAGUGUUUGGAUGGAAC 147862 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8124,sp|AC073115.5|AC073115 Homo sapiens BAC clone RP11-571N3 from 7, complete sequence. ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGAUGGAAC hit 180 : 47515 47486 (rev) 32.81 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGA :GA:: 119817 UCUCUUGCUUCAACAGUGUUUGGAUGGAAC 119846 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8232,sp|AC073345.11|AC073345 Homo sapiens BAC clone RP11-630O5 from 7, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCGUCAAUAGUGUUUGGACAGAAC hit 181 : 134049 134078 (fwd) 27.07 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCU+GC UCAA AGUGUUUGG CAGA:: 134049 UCUCUUGCGUCAAUAGUGUUUGGACAGAAC 134078 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8485,sp|AC074117.7|AC074117 Homo sapiens BAC clone RP11-413M20 from 2, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 182 : 152520 152549 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 152520 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 152549 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8639,sp|AC078871.16|AC078871 Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: UCUCUCUUCUACAGUGAUGGGACAGAAA hit 183 : 3465 3492 (fwd) 24.81 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC UUC ACAGUG U GGACAGA:: 3465 UCUCUC--UUCUACAGUGAUGGGACAGAAA 3492 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8641,sp|AC078873.22|AC078873 Homo sapiens 12q BAC RP11-916O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: GUUAAUUGCAGCAGUGUUUGCAGUAAC hit 184 : 67519 67493 (rev) 24.21 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU: + U:CA:CAGUGU:UG:A :AA: 122555 GUUAAU--UGCAGCAGUGUUUGCA-GUAAC 122581 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8715,sp|AC079061.8|AC079061 Homo sapiens chromosome 8, clone RP11-422N16, complete sequence. ----isReversed: 1 ----hitSequence: AUUAUUUUCAUCAGUGCAUGAAGUAUU hit 185 : 20012 19986 (rev) 23.68 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U::+ U:CA:CAGUG+:UG:A ::A : 182381 AUUAUU--UUCAUCAGUGCAUGAA-GUAUU 182407 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #9518,sp|AC087575.11|AC087575 Homo sapiens chromosome 17, clone RP11-305L6, complete sequence. ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAACAGUGUUUAGAACGAAC hit 186 : 151101 151072 (rev) 22.94 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC +GCUU AACAGUGUUU GA GA:: 47656 UCUCUUGCUUCAACAGUGUUUAGAACGAAC 47685 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #9897,sp|AC090685.8|AC090685 Homo sapiens chromosome 17, clone RP11-252O24, complete sequence. ----isReversed: 0 ----hitSequence: AUUAUUGACACUUAAACAGUGCUUUAAUAUAAU hit 187 : 157509 157541 (fwd) 22.86 bits <<<<<--...-<<<<<______>>>>>->>>>> 1 uuUcuCG...CuucaACAGUGuUuggaCagAag 30 :UU:U+G CU::AACAGUG+UU::A A:AA: 157509 AUUAUUGacaCUUAAACAGUGCUUUAAUAUAAU 157541 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #670,sp|AC092506.3|AC092506 Homo sapiens chromosome 1 clone RP11-364B6, complete sequence. ----isReversed: 0 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGGACGGAAC hit 188 : 100191 100220 (fwd) 34.53 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 100191 UGUCUUGCUUCAACAGUGUUUGGACGGAAC 100220 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #681,sp|AC092544.4|AC092544 Homo sapiens BAC clone RP11-317F4 from 4, complete sequence. ----isReversed: 1 ----hitSequence: UUAAUUGGCAACAGUGUUUGCCCUCAC hit 189 : 126999 126973 (rev) 24.38 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U : + ::CAACAGUGUUUG:: : A: 32265 UUAAUU--GGCAACAGUGUUUGCC-CUCAC 32291 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #948,sp|AC092932.9|AC092932 Homo sapiens 3 BAC RP11-152C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AUUUUCUUCAUCAGUGUAUGGGAAAAU hit 190 : 245 219 (rev) 25.81 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC UCA:CAGUGU:UGG A:AA: 37154 AUUUUC--UUCAUCAGUGUAUGGG-AAAAU 37180 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #1064,sp|AC093078.3|AC093078 Homo sapiens chromosome 19 clone LLNLR-305B7, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCCACAGUGUUUGGAUGGAAC hit 191 : 36541 36570 (fwd) 28.12 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUC ACAGUGUU GGA :GA:: 36541 UCUCUUGCUUCCACAGUGUUUGGAUGGAAC 36570 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #1268,sp|AC093484.2|AC093484 Homo sapiens chromosome , clone RP11-138I1, complete sequence. ----isReversed: 0 ----hitSequence: UCUUUUGCUUCAACAGUGUUUGGAACGAAC hit 192 : 112050 112079 (fwd) 25.31 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U+ +GCUUCAACAGUGUUUGGA +A:: 112050 UCUUUUGCUUCAACAGUGUUUGGAACGAAC 112079 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #2090,sp|AC098481.2|AC098481 Homo sapiens chromosome 3 clone RP11-349E16, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 193 : 107311 107340 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 107311 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 107340 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #3072,sp|AC104823.4|AC104823 Homo sapiens BAC clone RP11-762E8 from 2, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUUUAAACAGUGUUUAAAUGAAC hit 194 : 27428 27454 (fwd) 22.20 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC + U: AACAGUGUUU :A GA:: 27428 UCUCUU--UUAAACAGUGUUUAAA-UGAAC 27454 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #3246,sp|AC105314.5|AC105314 Homo sapiens BAC clone RP11-312H15 from 4, complete sequence. ----isReversed: 0 ----hitSequence: UUUUUCUUAAACAGUGUUUUGAAAAGA hit 195 : 159491 159517 (fwd) 25.41 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U:UC UU:AACAGUGUUU:GA A:A : 159491 UUUUUC--UUAAACAGUGUUUUGA-AAAGA 159517 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #3509,sp|AC106872.5|AC106872 Homo sapiens BAC clone RP11-366M4 from 4, complete sequence. ----isReversed: 0 ----hitSequence: UUUCUUGGAGACAGUGAUUCCCGGAAC hit 196 : 126189 126215 (fwd) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+ :: :ACAGUG U: :: :GAA: 126189 UUUCUU--GGAGACAGUGAUUCCC-GGAAC 126215 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #3530,sp|AC106895.5|AC106895 Homo sapiens BAC clone RP11-161D15 from 4, complete sequence. ----isReversed: 0 ----hitSequence: UUUAUCGGCCACAGUGGUGGCCAUAAU hit 197 : 107432 107458 (fwd) 23.67 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU:UC ::C:ACAGUG U:G:: A:AA 107432 UUUAUC--GGCCACAGUGGUGGCC-AUAAU 107458 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4088,sp|AC109352.3|AC109352 Homo sapiens BAC clone RP11-489P20 from 4, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGUUUCAACAGUGCUUGGAGGAAC hit 198 : 19020 19048 (fwd) 28.43 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+G UUCAACAGUG+UUGGA :GAA: 19020 UUUCCUGUUUCAACAGUGCUUGGA-GGAAC 19048 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4264,sp|AC110288.10|AC110288 Homo sapiens chromosome 8, clone CTD-2281E23, complete sequence. ----isReversed: 1 ----hitSequence: GCUCUUGUGAACAGUGCUUCACUGAAC hit 199 : 23790 23764 (rev) 23.38 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC + :: AACAGUG+UU :: GA:: 78963 GCUCUU--GUGAACAGUGCUUCAC-UGAAC 78989 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4748,sp|AC114277.2|AC114277 Homo sapiens chromosome 5 clone CTD-2009F3, complete sequence. ----isReversed: 0 ----hitSequence: ACUUUUGUAAACAGUGUUUUGUAAACU hit 200 : 68423 68449 (fwd) 22.79 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:U+ :U:AACAGUGUUU:G: A:A:: 68423 ACUUUU--GUAAACAGUGUUUUGU-AAACU 68449 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4896,sp|AC114876.2|AC114876 Homo sapiens chromosome 3 clone RP11-728B21, complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 201 : 16480 16451 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 155218 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 155247 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #5462,sp|AC120035.6|AC120035 Homo sapiens chromosome 8, clone RP11-1116K10, complete sequence. ----isReversed: 1 ----hitSequence: GCUCUUGUGAACAGUGCUUCACUGAAC hit 202 : 145175 145149 (rev) 23.38 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC + :: AACAGUG+UU :: GA:: 5871 GCUCUU--GUGAACAGUGCUUCAC-UGAAC 5897 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #6383,sp|AC134043.1|AC134043 Homo sapiens chromosome 5 clone RP11-175K6, complete sequence. ----isReversed: 1 ----hitSequence: UUUAAUUCCCACAGUGUUGGUAAUAAC hit 203 : 107851 107825 (rev) 22.51 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU: + U C:ACAGUGUU:G A :AA: 46248 UUUAAU--UCCCACAGUGUUGGUA-AUAAC 46274 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #6712,sp|AC138315.2|AC138315 Homo sapiens 3 BAC RP11-163K7 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: UGUUUUCCUGGGACAGUGCUCCCACAGAGG hit 204 : 22419 22448 (fwd) 22.69 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U+U+ CU: :ACAGUG+U: :ACA+A:G 22419 UGUUUUCCUGGGACAGUGCUCCCACAGAGG 22448 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #6729,sp|AC138430.2|AC138430 Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence. ----isReversed: 0 ----hitSequence: UCUCCCAGCCUCAGUGUAGGCUGGAGG hit 205 : 26197 26223 (fwd) 23.34 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:UC:C ::C::CAGUGU::G:: :GA:G 26197 UCUCCC--AGCCUCAGUGUAGGCU-GGAGG 26223 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #6773,sp|AC138761.4|AC138761 Homo sapiens chromosome 17, clone RP11-1109M24, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUAGAACGAAC hit 206 : 64571 64600 (fwd) 22.94 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC +GCUU AACAGUGUUU GA GA:: 64571 UCUCUUGCUUCAACAGUGUUUAGAACGAAC 64600 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #6879,sp|AC139617.6|AC139617 Homo sapiens 3 BAC RP11-722C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 207 : 17621 17592 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 8281 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 8310 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #7123,sp|AE000658.1|AE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529 (section 1 of 5) of the Complete Nucleotide Sequence. ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAACAGUGUUUAGAUGGAAC hit 208 : 20581 20552 (rev) 28.03 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUU AACAGUGUUU GA :GA:: 229949 UCUCUUGCUUCAACAGUGUUUAGAUGGAAC 229978 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum04.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum04.dat.fasta.gz ----sequence: #4286,sp|AF068624.1|AF068624 Homo sapiens 5-aminolevulinate synthase 2 (ALAS2) gene, complete cds. ----isReversed: 0 ----hitSequence: UCGUUCGUCCUCAGUGCAGGGCAACAG hit 209 : 10369 10395 (fwd) 23.78 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:::UC :UC::CAGUG+::GG: A:::G 10369 UCGUUC--GUCCUCAGUGCAGGGC-AACAG 10395 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #1215,sp|AF117958.1|AF117958 Homo sapiens ferritin L subunit gene, partial sequence. ----isReversed: 0 ----hitSequence: UCUCUUGUUUCAACAGUGUUUGGACGGAAC hit 210 : 132 161 (fwd) 32.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+G UUCAACAGUGUUUGGAC:GA:: 132 UCUCUUGUUUCAACAGUGUUUGGACGGAAC 161 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #1425,sp|AF119897.1|AF119897 Homo sapiens PRO2760 mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 211 : 1702 1731 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 1702 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 1731 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #3066,sp|AF139813.1|AF139813 Homo sapiens clone pDJ759j12 chromosome 11 map 11q13, complete sequence. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 212 : 20130 20159 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 20130 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 20159 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #6652,sp|AF187320.1|AF187320 Homo sapiens transferrin receptor (TFRC) gene, complete cds. ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 213 : 31063 31089 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 31063 UUUAUC--AGUGACAGAGUUCACU-AUAAA 31089 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #6652,sp|AF187320.1|AF187320 Homo sapiens transferrin receptor (TFRC) gene, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 214 : 31113 31139 (fwd) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 31113 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 31139 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #6652,sp|AF187320.1|AF187320 Homo sapiens transferrin receptor (TFRC) gene, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 215 : 31517 31543 (fwd) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 31517 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 31543 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #6652,sp|AF187320.1|AF187320 Homo sapiens transferrin receptor (TFRC) gene, complete cds. ----isReversed: 0 ----hitSequence: UGUAUCGGAGACAGUGAUCUCCAUAUG hit 216 : 31582 31608 (fwd) 25.13 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U:UC ::::ACAGUG U:::: A:A:G 31582 UGUAUC--GGAGACAGUGAUCUCC-AUAUG 31608 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #6652,sp|AF187320.1|AF187320 Homo sapiens transferrin receptor (TFRC) gene, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 217 : 31629 31655 (fwd) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 31629 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 31655 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum06.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum06.dat.fasta.gz ----sequence: #4458,sp|AF283991.1|AF283991 Homo sapiens (N6-adenosine)-methyltransferase gene, complete cds. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUAGAUGGAAC hit 218 : 1547 1576 (fwd) 28.03 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUU AACAGUGUUU GA :GA:: 1547 UCUCUUGCUUCAACAGUGUUUAGAUGGAAC 1576 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum08.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum08.dat.fasta.gz ----sequence: #4479,sp|AK026534.1|AK026534 Homo sapiens cDNA: FLJ22881 fis, clone KAT03571, highly similar to HUMFERL Human ferritin L chain mRNA. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 219 : 26 55 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 26 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 55 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum08.dat.fasta.gz ----sequence: #6100,sp|AK054816.1|AK054816 Homo sapiens cDNA FLJ30254 fis, clone BRACE2002441, highly similar to FERRITIN HEAVY CHAIN. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 220 : 1277 1306 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 1277 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 1306 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #3365,sp|AK092744.1|AK092744 Homo sapiens cDNA FLJ35425 fis, clone SMINT2001615, highly similar to FERRITIN LIGHT CHAIN. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 221 : 974 1003 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 974 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 1003 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #50,sp|AL138710.16|AL138710 Human DNA sequence from clone RP11-469A21 on chromosome 13 ----isReversed: 0 ----hitSequence: GUUUUUGUCAUCAGUUAAUGGCAAAAC hit 222 : 25137 25163 (fwd) 22.36 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:U+ :UCA:CAGU :UGG: A:AA: 25137 GUUUUU--GUCAUCAGUUAAUGGC-AAAAC 25163 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #190,sp|AL138916.14|AL138916 Human DNA sequence from clone RP11-497D6 on chromosome 6 ----isReversed: 0 ----hitSequence: UGUAUGUUUAUCAGUGCAUAGAAUAAC hit 223 : 111000 111026 (fwd) 22.10 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U:U UU:A:CAGUG+:U:GA A:A:: 111000 UGUAUG--UUUAUCAGUGCAUAGA-AUAAC 111026 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1153,sp|AL162458.10|AL162458 Human DNA sequence from clone RP11-465L10 on chromosome 20. Contains 10 CpG islands, ESTs, STSs and GSSs. Contains the gene for ----isReversed: 1 ----hitSequence: UGUCUUGCUUCAACAGUGUUUGGACGGAAG hit 224 : 62663 62634 (rev) 34.96 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:UC:+GCUUCAACAGUGUUUGGAC:GA:G 88129 UGUCUUGCUUCAACAGUGUUUGGACGGAAG 88158 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1406,sp|AL353745.7|AL353745 Human DNA sequence from clone RP11-560D2 on chromosome 9 Contains a ferritin, light polypeptide-like pseudogene and a heat shoc ----isReversed: 0 ----hitSequence: UUUCUUGCUUUAACAGUAUUUUGACAGAGC hit 225 : 70647 70676 (fwd) 23.41 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : UCU+GCUU AACAGU UUU GACAGA : 70647 UUUCUUGCUUUAACAGUAUUUUGACAGAGC 70676 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1567,sp|AL354803.24|AL354803 Human DNA sequence from clone RP11-539I23 on chromosome 13 ----isReversed: 1 ----hitSequence: AUUUUUUUCAUCAGUGUUGGGAAAAAU hit 226 : 111711 111685 (rev) 22.02 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:U+ UUC CAGUGU GGA A:AA: 67670 AUUUUU--UUCAUCAGUGUUGGGA-AAAAU 67696 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1588,sp|AL354828.12|AL354828 Human DNA sequence from clone RP11-274P12 on chromosome 13 ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 227 : 100012 99983 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 68103 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 68132 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2278,sp|AL357149.13|AL357149 Human DNA sequence from clone RP11-352E13 on chromosome 6 ----isReversed: 1 ----hitSequence: UUCUUCUGCAACAGUGUUUGCAGGGAG hit 228 : 87262 87236 (rev) 25.45 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 UU:+:C U:CAACAGUGUUUG:A :+:AG 114138 UUCUUC--UGCAACAGUGUUUGCA-GGGAG 114164 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2500,sp|AL359174.14|AL359174 Human DNA sequence from clone RP11-423D17 on chromosome 6 ----isReversed: 0 ----hitSequence: AUAAUUUUAAACAGUGUUUGAAAUUAU hit 229 : 103948 103974 (fwd) 22.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U :U+ U: AACAGUGUUU :A A: A: 103948 AUAAUU--UUAAACAGUGUUUGAA-AUUAU 103974 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2682,sp|AL359816.16|AL359816 Human DNA sequence from clone RP11-37P5 on chromosome 10 ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGAAGGAAU hit 230 : 59305 59276 (rev) 27.66 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UC:+GCUUCAACAGUGUUUGGA :GA: 42797 UCUCUUGCUUCAACAGUGUUUGGAAGGAAU 42826 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2797,sp|AL360173.15|AL360173 Human DNA sequence from clone RP11-75F12 on chromosome Xq21.31-22.2 ----isReversed: 1 ----hitSequence: CCUUGCUUAAACAGUGUUUUAACAAAG hit 231 : 76583 76557 (rev) 22.72 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U:+C U::AACAGUGUUU::A +:A: 28925 CCUUGC--UUAAACAGUGUUUUAA-CAAAG 28951 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2824,sp|AL360235.12|AL360235 Human DNA sequence from clone RP11-88M9 on chromosome 9 ----isReversed: 0 ----hitSequence: AGUAUCUUCAACAGUGGUUGAAGUAAU hit 232 : 41717 41743 (fwd) 25.46 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U::C U:CAACAGUG UUG:A ::A:: 41717 AGUAUC--UUCAACAGUGGUUGAA-GUAAU 41743 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #3092,sp|AL390878.6|AL390878 Human DNA sequence from clone RP11-442F12 on chromosome 13 ----isReversed: 0 ----hitSequence: UCACUUGCUUCAACAGUGAUUGGACAGAAU hit 233 : 166794 166823 (fwd) 26.66 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : CU+GCUUCAACAGUG UUGGACAG : 166794 UCACUUGCUUCAACAGUGAUUGGACAGAAU 166823 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4353,sp|AL590037.7|AL590037 Human DNA sequence from clone RP11-129K24 on chromosome 6 ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACAGAAC hit 234 : 73844 73873 (fwd) 32.45 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC +GCUUCAACAGUG+UUGGAC GAA: 73844 UUUCCUGCUUCAACAGUGCUUGGACAGAAC 73873 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4627,sp|AL590725.5|AL590725 Human DNA sequence from clone RP11-107L15 on chromosome 6 ----isReversed: 1 ----hitSequence: UUUAUCUUUAACAGUGAUUAAAGUAAA hit 235 : 167724 167698 (rev) 26.83 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU::C U::AACAGUG UU::A ::AA: 12985 UUUAUC--UUUAACAGUGAUUAAA-GUAAA 13011 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #5002,sp|AL592437.7|AL592437 Human DNA sequence from clone RP11-18B3 on chromosome 9 ----isReversed: 0 ----hitSequence: UUCCUUGCUUCAACAGUGUUUGGAUGGAAC hit 236 : 34851 34880 (fwd) 28.98 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U:C:+GCUUCAACAGUGUUUGGA :G:A: 34851 UUCCUUGCUUCAACAGUGUUUGGAUGGAAC 34880 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #6487,sp|AP000485.5|AP000485 Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24. ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAAUAGUAUUUGGAUGGAAC hit 237 : 45574 45545 (rev) 22.67 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAA AGU UUUGGA :GA:: 93499 UCUCUUGCUUCAAUAGUAUUUGGAUGGAAC 93528 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #6863,sp|AP001157.4|AP001157 Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2. ----isReversed: 1 ----hitSequence: UCUCUUGCUUCAAUAGUAUUUGGAUGGAAC hit 238 : 190953 190924 (rev) 22.67 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAA AGU UUUGGA :GA:: 9506 UCUCUUGCUUCAAUAGUAUUUGGAUGGAAC 9535 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7033,sp|AP001506.1|AP001506 Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821M7, LL56-APP region. ----isReversed: 0 ----hitSequence: AGUAUCUGAAUCAGUGCAUUCAGUAAA hit 239 : 9501 9527 (fwd) 22.68 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U::C U::A:CAGUG+:U::A ::A: 9501 AGUAUC--UGAAUCAGUGCAUUCA-GUAAA 9527 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7065,sp|AP001599.1|AP001599 Homo sapiens genomic DNA, chromosome 21, clone:KB126A3, APP-D21S292 region. ----isReversed: 0 ----hitSequence: UGUUCUUUCAUCAGUGAAUGGAUAAAG hit 240 : 77931 77957 (fwd) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U: + UUCA:CAGUG :UGGA :A:G 77931 UGUUCU--UUCAUCAGUGAAUGGA-UAAAG 77957 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7066,sp|AP001600.1|AP001600 Homo sapiens genomic DNA, chromosome 21, clone:KB45E1, APP-D21S292 region. ----isReversed: 0 ----hitSequence: UGUUCUUUCAUCAGUGAAUGGAUAAAG hit 241 : 24591 24617 (fwd) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U: + UUCA:CAGUG :UGGA :A:G 24591 UGUUCU--UUCAUCAGUGAAUGGA-UAAAG 24617 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7117,sp|AP001679.1|AP001679 Homo sapiens genomic DNA, chromosome 21q, section 23/105. ----isReversed: 0 ----hitSequence: AGUAUCUGAAUCAGUGCAUUCAGUAAA hit 242 : 171358 171384 (fwd) 22.68 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U::C U::A:CAGUG+:U::A ::A: 171358 AGUAUC--UGAAUCAGUGCAUUCA-GUAAA 171384 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7134,sp|AP001697.1|AP001697 Homo sapiens genomic DNA, chromosome 21q, section 41/105. ----isReversed: 0 ----hitSequence: UGUUCUUUCAUCAGUGAAUGGAUAAAG hit 243 : 265643 265669 (fwd) 22.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U: + UUCA:CAGUG :UGGA :A:G 265643 UGUUCU--UUCAUCAGUGAAUGGA-UAAAG 265669 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7296,sp|AP002343.2|AP002343 Homo sapiens genomic DNA, chromosome 11q clone:CTD-2313I10, complete sequences. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 244 : 2540 2511 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 71149 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 71178 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7356,sp|AP002530.2|AP002530 Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4. ----isReversed: 0 ----hitSequence: AUAAUUUUAAACAGUGUUUGAAAUUAU hit 245 : 79934 79960 (fwd) 22.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U :U+ U: AACAGUGUUU :A A: A: 79934 AUAAUU--UUAAACAGUGUUUGAA-AUUAU 79960 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7423,sp|AP002906.2|AP002906 Homo sapiens genomic DNA, chromosome 8q23, clone: KB1589B1. ----isReversed: 1 ----hitSequence: UUUCACUUUCACAGUGUUGUGAUGAAC hit 246 : 111257 111231 (rev) 22.84 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC C UU :ACAGUGUU: GA GAA: 51472 UUUCAC--UUUCACAGUGUUGUGA-UGAAC 51498 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7540,sp|AP003174.2|AP003174 Homo sapiens genomic DNA, chromosome 11q, clone:RP11-136I14. ----isReversed: 1 ----hitSequence: UUUCUUCUUCAACAGUGUUUGGAUGGAAC hit 247 : 91762 91734 (rev) 28.48 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+ CUUCAACAGUGUUUGGA :GAA: 78395 UUUCUU-CUUCAACAGUGUUUGGAUGGAAC 78423 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7553,sp|AP003352.2|AP003352 Homo sapiens genomic DNA, chromosome 8q23, clone: KB1208A12. ----isReversed: 1 ----hitSequence: UUUCACUUUCACAGUGUUGUGAUGAAC hit 248 : 35429 35403 (rev) 22.84 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC C UU :ACAGUGUU: GA GAA: 151921 UUUCAC--UUUCACAGUGUUGUGA-UGAAC 151947 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7645,sp|AP003691.2|AP003691 Homo sapiens genomic DNA, chromosome 8q23, clone:KB1594B3, complete sequence. ----isReversed: 1 ----hitSequence: UCUACCUUCCACAGUGUUGGGAUUAUA hit 249 : 65931 65905 (rev) 22.27 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::U: C UUC:ACAGUGUU:GGA :A:: 92022 UCUACC--UUCCACAGUGUUGGGA-UUAUA 92048 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7659,sp|AP003721.3|AP003721 Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete sequence. ----isReversed: 1 ----hitSequence: UCUCUCUUCCACAGUGUUGGGGAGACA hit 250 : 159360 159334 (rev) 22.75 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UCUC UC:ACAGUGUU:GG AGA:: 42101 UCUCUC--UUCCACAGUGUUGGGG-AGACA 42127 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7664,sp|AP003733.5|AP003733 Homo sapiens genomic DNA, chromosome 11 clone:RP11-810P12, complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 251 : 17837 17808 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 149031 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 149060 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7709,sp|AP004281.2|AP004281 Homo sapiens genomic DNA, chromosome 8q23, clone: KB1157A1. ----isReversed: 0 ----hitSequence: AUUAUUUUCAUCAGUGCAUGAAGUAUU hit 252 : 66169 66195 (fwd) 23.68 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 : U::+ U:CA:CAGUG+:UG:A ::A : 66169 AUUAUU--UUCAUCAGUGCAUGAA-GUAUU 66195 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7909,sp|AP006197.1|AP006197 Homo sapiens genomic DNA, chromosome 6, clone:RP11-360J22, complete sequence. ----isReversed: 0 ----hitSequence: AUAAUUUUAAACAGUGUUUGAAAUUAU hit 253 : 146789 146815 (fwd) 22.26 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :U :U+ U: AACAGUGUUU :A A: A: 146789 AUAAUU--UUAAACAGUGUUUGAA-AUUAU 146815 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7923,sp|AP006212.1|AP006212 Homo sapiens genomic DNA, chromosome 20, clone:CTB-271B20, complete sequence. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 254 : 14436 14465 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 14436 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 14465 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7958,sp|AP006260.2|AP006260 Homo sapiens genomic DNA, chromosome 11 clone:RP11-61G16, complete sequence. ----isReversed: 1 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 255 : 129792 129763 (rev) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 33233 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 33262 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #1540,sp|AY162833.1|AY162833 Homo sapiens E2F transcription factor 5, p130-binding (E2F5) gene, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCUUUAACAGUGUUUAAAAUUAA hit 256 : 19767 19793 (fwd) 22.15 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U :UC U::AACAGUGUUU::A A: A 19767 AUUAUC--UUUAACAGUGUUUAAA-AUUAA 19793 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #2276,sp|AY207005.1|AY207005 Homo sapiens ferritin-like protein mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 257 : 30 59 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 30 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 59 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #8874,sp|BC000857.1|BC000857 Homo sapiens ferritin, heavy polypeptide 1, mRNA (cDNA clone MGC:5580 IMAGE:3459353), complete cds. ----isReversed: 0 ----hitSequence: UUUCCUGCUUCAACAGUGCUUGGACGGAAC hit 258 : 17 46 (fwd) 35.64 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UUC:+GCUUCAACAGUG+UUGGAC:GAA: 17 UUUCCUGCUUCAACAGUGCUUGGACGGAAC 46 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9177,sp|BC001188.1|BC001188 Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151 IMAGE:3354176, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUUAUCAGUGACAGAGUUCACUAUAAA hit 259 : 3225 3251 (fwd) 23.22 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC ::::ACAG GUU:::: A:AA: 3225 UUUAUC--AGUGACAGAGUUCACU-AUAAA 3251 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9177,sp|BC001188.1|BC001188 Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151 IMAGE:3354176, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGAAGCAGUGCCUUCCAUAAU hit 260 : 3275 3301 (fwd) 28.25 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :::A:CAGUG+:U::: A:AA: 3275 AUUAUC--GGAAGCAGUGCCUUCC-AUAAU 3301 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9177,sp|BC001188.1|BC001188 Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151 IMAGE:3354176, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAGCAGUGUCUUCCAUAAU hit 261 : 3679 3705 (fwd) 27.71 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: A:CAGUGU:U :: A:AA: 3679 AUUAUC--GGGAGCAGUGUCUUCC-AUAAU 3705 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9177,sp|BC001188.1|BC001188 Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151 IMAGE:3354176, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UGUAUCGGAGACAGUGAUCUCCAUAUG hit 262 : 3744 3770 (fwd) 25.13 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 U:U:UC ::::ACAGUG U:::: A:A:G 3744 UGUAUC--GGAGACAGUGAUCUCC-AUAUG 3770 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9177,sp|BC001188.1|BC001188 Homo sapiens, transferrin receptor (p90, CD71), clone MGC:3151 IMAGE:3354176, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AUUAUCGGGAACAGUGUUUCCCAUAAU hit 263 : 3791 3817 (fwd) 30.18 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 :UU:UC :: AACAGUGUUU :: A:AA: 3791 AUUAUC--GGGAACAGUGUUUCCC-AUAAU 3817 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #1020,sp|BC004245.1|BC004245 Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:10465 IMAGE:3615360), complete cds. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 264 : 15 44 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 15 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 44 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #3481,sp|BC008439.1|BC008439 Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:14642 IMAGE:4093482), complete cds. ----isReversed: 0 ----hitSequence: UCUCUUGCUUCAACAGUGUUUGGACGGAAC hit 265 : 26 55 (fwd) 34.85 bits <<<<<---<<<<<______>>>>>->>>>> 1 uuUcuCGCuucaACAGUGuUuggaCagAag 30 ::UC:+GCUUCAACAGUGUUUGGAC:GA:: 26 UCUCUUGCUUCAACAGUGUUUGGACGGAAC 55 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #5196,sp|BC011359.1|BC011359 Homo sapiens, Similar to ferritin, heavy polypeptide 1, clone MGC:18238 IMAGE:4157296, mR