Params: ./cmzasha --no-stderr --filter 30 24.76 Rfam/cm/RF00032.cm @/projects/bio/zasha/seqs/embl_release76/full-embl.list 1 hmm data/TryAllCm/RF00032_greedy_forwardinf_cfsqp_cycling_Ecoli_0MM.bin Build: release Host: recycle.cs.washington.edu ----cmFile: Rfam/cm/RF00032.cm (global) ----fastaFile: /projects/bio/zasha/seqs/embl/fun.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/fun.dat.fasta.gz ----sequence: #1673,sp|AB027323.1|AB027323 Cordyceps paradoxa DNA for 18S ribosomal RNA. ----isReversed: 1 ----hitSequence: AACAGGGCCCUUUUCAGGGCCCCCUC hit 0 : 2240 2215 (rev) 25.29 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ A GGC:CUUUUCAG:GCC CC 397 AACAGGGCCCUUUUCAGGGCCCCCUC 422 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #140,sp|AJ238321.1|AAQ238321 Asellus aquaticus 5S rRNA gene, histone H2B, histone H2A, histone H3 and histone H4. ----isReversed: 0 ----hitSequence: CAAAAGGGUCUAUUUAGACCCACAAA hit 1 : 3588 3613 (fwd) 26.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGG UCU UU AGA CCAC AA 3588 CAAAAGGGUCUAUUUAGACCCACAAA 3613 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #140,sp|AJ238321.1|AAQ238321 Asellus aquaticus 5S rRNA gene, histone H2B, histone H2A, histone H3 and histone H4. ----isReversed: 1 ----hitSequence: AAAAAGGCCCUAUUUAGGGCCAAAUA hit 2 : 2546 2521 (rev) 25.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGC:CU UU AG:GCCA A 4008 AAAAAGGCCCUAUUUAGGGCCAAAUA 4033 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #289,sp|AB002280.1|AB002280 Bombyx mori L1Bm DNA, non-LTR retrotransposon. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCGCAAA hit 3 : 288 313 (fwd) 32.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCC C AA 288 CAAAAGGCCCUUUUCAGGGCCGCAAA 313 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #289,sp|AB002280.1|AB002280 Bombyx mori L1Bm DNA, non-LTR retrotransposon. ----isReversed: 0 ----hitSequence: CCAACUGCCUUUUUCAAGGCAACCAA hit 4 : 996 1021 (fwd) 27.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+:GC::UUUUCA::GC:ACCAA 996 CCAACUGCCUUUUUCAAGGCAACCAA 1021 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #290,sp|AB002281.1|AB002281 Bombyx mori L1Bm DNA, non-LTR retrotransposon. ----isReversed: 0 ----hitSequence: CAAAAGGACCUUUUAAGGGCCGCAAA hit 5 : 292 317 (fwd) 25.27 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGG::CUUUU AG::CC C AA 292 CAAAAGGACCUUUUAAGGGCCGCAAA 317 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1061,sp|AB019400.1|AB019400 Drosophila melanogaster gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 6 : 820 845 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 820 UAAUCGGUCCUUUUCAGGACCACAAA 845 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1062,sp|AB019401.1|AB019401 Drosophila simulans gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 7 : 786 811 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 786 UAAUCGGUCCUUUUCAGGACCACAAA 811 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1063,sp|AB019402.1|AB019402 Drosophila sechellia gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 8 : 789 814 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 789 UAAUCGGUCCUUUUCAGGACCACAAA 814 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1064,sp|AB019403.1|AB019403 Drosophila mauritiana gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 9 : 787 812 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 787 UAAUCGGUCCUUUUCAGGACCACAAA 812 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1065,sp|AB019404.1|AB019404 Drosophila teissieri gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACAAA hit 10 : 806 831 (fwd) 29.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCAC AA 806 CAAUCGGUCCUUUUCAGGACCACAAA 831 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1067,sp|AB019406.1|AB019406 Drosophila erecta gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACAAA hit 11 : 811 836 (fwd) 29.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCAC AA 811 CAAUCGGUCCUUUUCAGGACCACAAA 836 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #1068,sp|AB019407.1|AB019407 Drosophila orena gene for histone H3, complete cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACAAA hit 12 : 798 823 (fwd) 29.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCAC AA 798 CAAUCGGUCCUUUUCAGGACCACAAA 823 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #2989,sp|AB055959.1|AB055959 Drosophila simulans H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 0 ----hitSequence: CCAUCGGUCCUUUUCAGGACCACUAU hit 13 : 637 662 (fwd) 26.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CA +GG::CUUUUCAG::CCAC A 637 CCAUCGGUCCUUUUCAGGACCACUAU 662 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #2989,sp|AB055959.1|AB055959 Drosophila simulans H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCCCUUUUCAGGGCCACAAU hit 14 : 2078 2103 (fwd) 35.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUUCAG:GCCAC A 2078 AAAACGGCCCUUUUCAGGGCCACAAU 2103 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #2989,sp|AB055959.1|AB055959 Drosophila simulans H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 1 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 15 : 4585 4560 (rev) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 51 UAAUCGGUCCUUUUCAGGACCACAAA 76 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #2989,sp|AB055959.1|AB055959 Drosophila simulans H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 1 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 16 : 1030 1005 (rev) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 3606 CAAACCGUCCUUUUCAGGACGACCAA 3631 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3676,sp|AB073634.1|AB073634 Drosophila erecta H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAU hit 17 : 652 677 (fwd) 28.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCA 652 CAAUCGGUCCUUUUCAGGACCACCAU 677 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3676,sp|AB073634.1|AB073634 Drosophila erecta H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCCCUUUUCAGGGCCACAAU hit 18 : 2133 2158 (fwd) 35.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUUCAG:GCCAC A 2133 AAAACGGCCCUUUUCAGGGCCACAAU 2158 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3676,sp|AB073634.1|AB073634 Drosophila erecta H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 1 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACAAA hit 19 : 4669 4644 (rev) 29.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCAC AA 62 CAAUCGGUCCUUUUCAGGACCACAAA 87 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3676,sp|AB073634.1|AB073634 Drosophila erecta H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 1 ----hitSequence: AAACAAGCCCUUUUCAGGGCUACAAC hit 20 : 2450 2425 (rev) 27.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A A:GC:CUUUUCAG:GC:AC A 2281 AAACAAGCCCUUUUCAGGGCUACAAC 2306 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3676,sp|AB073634.1|AB073634 Drosophila erecta H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds. ----isReversed: 1 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 21 : 1085 1060 (rev) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 3646 CAAACCGUCCUUUUCAGGACGACCAA 3671 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3677,sp|AB073635.1|AB073635 Drosophila yakuba H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds, clone:Yak6. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAC hit 22 : 642 667 (fwd) 29.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCA 642 CAAUCGGUCCUUUUCAGGACCACCAC 667 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3677,sp|AB073635.1|AB073635 Drosophila yakuba H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds, clone:Yak6. ----isReversed: 0 ----hitSequence: AAAACGGCCCUUUUCAGGGCCACAAU hit 23 : 2145 2170 (fwd) 35.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUUCAG:GCCAC A 2145 AAAACGGCCCUUUUCAGGGCCACAAU 2170 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3677,sp|AB073635.1|AB073635 Drosophila yakuba H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds, clone:Yak6. ----isReversed: 1 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACAAA hit 24 : 4724 4699 (rev) 29.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCAC AA 60 CAAUCGGUCCUUUUCAGGACCACAAA 85 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3677,sp|AB073635.1|AB073635 Drosophila yakuba H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds, clone:Yak6. ----isReversed: 1 ----hitSequence: AAACAAGCCCUUUUCAGGGCUACAAC hit 25 : 2443 2418 (rev) 27.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A A:GC:CUUUUCAG:GC:AC A 2341 AAACAAGCCCUUUUCAGGGCUACAAC 2366 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3677,sp|AB073635.1|AB073635 Drosophila yakuba H4, H2A, H2B, H1 genes for histone 4, histone 2A, histone 2B, histone 1, complete cds, clone:Yak6. ----isReversed: 1 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 26 : 1090 1065 (rev) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 3694 CAAACCGUCCUUUUCAGGACGACCAA 3719 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #3773,sp|AB076033.1|AB076033 Lymantria dispar DNA, microsatellite, locus GM741. ----isReversed: 0 ----hitSequence: GAAAAGGCCCUUUUCAGGGCCACAAA hit 27 : 292 317 (fwd) 34.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCAC AA 292 GAAAAGGCCCUUUUCAGGGCCACAAA 317 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #5848,sp|AC010057.7|AC010057 Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AACACGGCCUUUUACACGGCCACCAA hit 28 : 36119 36094 (rev) 24.77 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ A+GGC::UUU CA::GCCACCAA 156470 AACACGGCCUUUUACACGGCCACCAA 156495 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6008,sp|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, region 93D-93D, BAC clone BACR34E13, complete sequence. ----isReversed: 1 ----hitSequence: UAAUCGGCUCUUUUAAGAGCCACCAA hit 29 : 92623 92598 (rev) 31.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GGCUCUUUU AGAGCCACCAA 74853 UAAUCGGCUCUUUUAAGAGCCACCAA 74878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 30 : 13704 13729 (fwd) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 13704 CCAACGGCCCUCUUUAGGGCCACAUA 13729 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUAAGGGCCACAAA hit 31 : 16166 16191 (fwd) 32.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 16166 CCAACGGCCCUCUUAAGGGCCACAAA 16191 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGAGCCACAAA hit 32 : 19380 19405 (fwd) 26.63 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CU UU AG GCCAC AA 19380 CCAACGGCCCUCUUUAGAGCCACAAA 19405 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUAAGGGCCACAAA hit 33 : 18273 18248 (rev) 32.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 21974 CCAACGGCCCUCUUAAGGGCCACAAA 21999 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 34 : 15059 15034 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 25188 CCAACGGCCCUCUUUAGGGCCACAAA 25213 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6124,sp|AC024696.1|AC024696 Caenorhabditis elegans cosmid F07B7, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 35 : 12654 12629 (rev) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 27593 CCAACGGCCCUCUUUAGGGCCACAAU 27618 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6387,sp|AC084502.1|AC084502 Caenorhabditis briggsae cosmid G14F21, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 36 : 4081 4106 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 4081 CCAACGGCCCUCUUUAGGGCCACAAA 4106 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6387,sp|AC084502.1|AC084502 Caenorhabditis briggsae cosmid G14F21, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 37 : 7086 7111 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 7086 CCAACGGCCCUCUUUAGGGCCACAAA 7111 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6387,sp|AC084502.1|AC084502 Caenorhabditis briggsae cosmid G14F21, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 38 : 6022 5997 (rev) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 33418 CCAACGGCCCUCUUUAGGGCCACAAU 33443 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6387,sp|AC084502.1|AC084502 Caenorhabditis briggsae cosmid G14F21, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 39 : 3035 3010 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 36405 CCAACGGCCCUCUUUAGGGCCACAAA 36430 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6474,sp|AC084589.1|AC084589 Caenorhabditis briggsae cosmid G41K24, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 40 : 6075 6100 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 6075 CCAACGGCCCUCUUUAGGGCCACAAA 6100 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6474,sp|AC084589.1|AC084589 Caenorhabditis briggsae cosmid G41K24, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 41 : 9378 9403 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 9378 CCAACGGCCCUCUUUAGGGCCACAAA 9403 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6474,sp|AC084589.1|AC084589 Caenorhabditis briggsae cosmid G41K24, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAG hit 42 : 8311 8286 (rev) 25.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 30375 CCAACGGCCCUCUUUAGGGCCACAAG 30400 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6474,sp|AC084589.1|AC084589 Caenorhabditis briggsae cosmid G41K24, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACGAA hit 43 : 5032 5007 (rev) 27.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 33654 CCAACGGCCCUCUUUAGGGCCACGAA 33679 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6538,sp|AC084653.1|AC084653 Caenorhabditis briggsae cosmid G45O14, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAC hit 44 : 38344 38369 (fwd) 29.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 38344 CCAACGGCCCUCUUUAGGGCCACAAC 38369 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6538,sp|AC084653.1|AC084653 Caenorhabditis briggsae cosmid G45O14, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 45 : 40174 40199 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 40174 CCAACGGCCCUCUUUAGGGCCACAAA 40199 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6538,sp|AC084653.1|AC084653 Caenorhabditis briggsae cosmid G45O14, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 46 : 39102 39077 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 4882 CCAACGGCCCUCUUUAGGGCCACAAA 4907 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6538,sp|AC084653.1|AC084653 Caenorhabditis briggsae cosmid G45O14, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUAAGGGCCACAAA hit 47 : 37280 37255 (rev) 32.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 6704 CCAACGGCCCUCUUAAGGGCCACAAA 6729 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #6624,sp|AC091219.2|AC091219 Drosophila melanogaster 3L BAC RP98-4C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AACACGGCCUUUUACACGGCCACCAA hit 48 : 75469 75444 (rev) 24.77 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ A+GGC::UUU CA::GCCACCAA 92579 AACACGGCCUUUUACACGGCCACCAA 92604 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7485,sp|AE003469.3|AE003469 Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete sequence. ----isReversed: 1 ----hitSequence: AACACGGCCUUUUACACGGCCACCAA hit 49 : 62148 62123 (rev) 24.77 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ A+GGC::UUU CA::GCCACCAA 224368 AACACGGCCUUUUACACGGCCACCAA 224393 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 0 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 50 : 120230 120255 (fwd) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 120230 CAAACCGUCCUUUUCAGGACGACCAA 120255 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 0 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 51 : 121012 121037 (fwd) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 121012 CAAACCGUCCUUUUCAGGACGACCAA 121037 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 0 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 52 : 136038 136063 (fwd) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 136038 CAAACCGUCCUUUUCAGGACGACCAA 136063 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 53 : 137528 137553 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 137528 UAAUCGGUCCUUUUCAGGACCACAAA 137553 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 1 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAU hit 54 : 136432 136407 (rev) 28.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCA 3669 CAAUCGGUCCUUUUCAGGACCACCAU 3694 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7686,sp|AE003670.4|AE003670 Drosophila melanogaster chromosome 2L section 79 of 83 of the complete sequence. ----isReversed: 1 ----hitSequence: AAAACGGCCCUUUUCAGGGCCACAAU hit 55 : 134986 134961 (rev) 35.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUUCAG:GCCAC A 5115 AAAACGGCCCUUUUCAGGGCCACAAU 5140 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #7750,sp|AE003734.2|AE003734 Drosophila melanogaster chromosome 3R, section 72 of 118 of the complete sequence. ----isReversed: 1 ----hitSequence: UAAUCGGCUCUUUUAAGAGCCACCAA hit 56 : 218715 218690 (rev) 31.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GGCUCUUUU AGAGCCACCAA 22766 UAAUCGGCUCUUUUAAGAGCCACCAA 22791 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #8540,sp|AF007904.1|AF007904 Chaetopterus variopedatus histone H4 and histone H2A genes, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGUCCUUAUCAGGACCAAACA hit 57 : 709 734 (fwd) 28.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GG::CUU UCAG::CCA +A 709 AAAACGGUCCUUAUCAGGACCAAACA 734 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #8540,sp|AF007904.1|AF007904 Chaetopterus variopedatus histone H4 and histone H2A genes, complete cds. ----isReversed: 1 ----hitSequence: CCAACGGUCCUUCUCAGGACCACUAU hit 58 : 1311 1286 (rev) 29.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG::CUU UCAG::CCAC A 539 CCAACGGUCCUUCUCAGGACCACUAU 564 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #11917,sp|AF047656.1|AF047656 Caenorhabditis elegans cosmid F17E9, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAC hit 59 : 2352 2377 (fwd) 29.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 2352 CCAACGGCCCUCUUUAGGGCCACAAC 2377 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #11917,sp|AF047656.1|AF047656 Caenorhabditis elegans cosmid F17E9, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 60 : 3963 3988 (fwd) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 3963 CCAACGGCCCUCUUUAGGGCCACAAU 3988 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #11917,sp|AF047656.1|AF047656 Caenorhabditis elegans cosmid F17E9, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUU hit 61 : 2893 2868 (rev) 26.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC 22651 CCAACGGCCCUCUUUAGGGCCACAUU 22676 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #11917,sp|AF047656.1|AF047656 Caenorhabditis elegans cosmid F17E9, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 62 : 1223 1198 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 24321 CCAACGGCCCUCUUUAGGGCCACAAA 24346 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #16166,sp|AF107695.1|AF107695 Aedes aegypti clone 440 Feilai family of SINES. ----isReversed: 0 ----hitSequence: AAAAGGGCCCUCUUCAGGGCCACAAC hit 63 : 103 128 (fwd) 27.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA GGC:CU UUCAG:GCCAC A 103 AAAAGGGCCCUCUUCAGGGCCACAAC 128 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26456,sp|AF216837.1|AF216837 Drosophila virilis clone p3.6-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 64 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26456,sp|AF216837.1|AF216837 Drosophila virilis clone p3.6-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 1 ----hitSequence: CCAACCGUCCUUUUCAGGACGACCAA hit 65 : 815 790 (rev) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+ G::CUUUUCAG::C ACCAA 180 CCAACCGUCCUUUUCAGGACGACCAA 205 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26456,sp|AF216837.1|AF216837 Drosophila virilis clone p3.6-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 1 ----hitSequence: CCAAGCGUCCUUUUCAGGACAACCCA hit 66 : 384 359 (rev) 24.87 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA G::CUUUUCAG::C ACC+A 611 CCAAGCGUCCUUUUCAGGACAACCCA 636 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26457,sp|AF216838.1|AF216838 Drosophila virilis clone p5.2-33 histone H4 gene, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 67 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26458,sp|AF216839.1|AF216839 Drosophila virilis clone p5.2-33 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAACCGUCCUUUUCAGGACGACCAA hit 68 : 953 928 (rev) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+ G::CUUUUCAG::C ACCAA 180 CCAACCGUCCUUUUCAGGACGACCAA 205 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26459,sp|AF216840.1|AF216840 Drosophila virilis clone p5.3-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 69 : 91 116 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 91 CAAUCGGUCCUUUUCAGGACCACCAA 116 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26459,sp|AF216840.1|AF216840 Drosophila virilis clone p5.3-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 1 ----hitSequence: CCAACCGUCCUUUUCAGGACGACCAA hit 70 : 816 791 (rev) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+ G::CUUUUCAG::C ACCAA 180 CCAACCGUCCUUUUCAGGACGACCAA 205 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26459,sp|AF216840.1|AF216840 Drosophila virilis clone p5.3-33 histone H4 and histone H2A genes, partial cds. ----isReversed: 1 ----hitSequence: CCAAGCGUCCUUUUCAGGACAACCCA hit 71 : 385 360 (rev) 24.87 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA G::CUUUUCAG::C ACC+A 611 CCAAGCGUCCUUUUCAGGACAACCCA 636 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26460,sp|AF216841.1|AF216841 Drosophila virilis clone p5.9-12 histone H4 and histone H2A genes, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 72 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26460,sp|AF216841.1|AF216841 Drosophila virilis clone p5.9-12 histone H4 and histone H2A genes, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 73 : 1407 1382 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 180 CCAAACGUCCUUUUCAGGACGACCAA 205 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26461,sp|AF216842.1|AF216842 Drosophila virilis clone p7.0-33 histone H4 gene, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 74 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26462,sp|AF216843.1|AF216843 Drosophila virilis clone p7.0-33 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 75 : 1447 1422 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 179 CCAAACGUCCUUUUCAGGACGACCAA 204 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26462,sp|AF216843.1|AF216843 Drosophila virilis clone p7.0-33 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUAUCAGGACGACCAA hit 76 : 1016 991 (rev) 28.12 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUU UCAG::C ACCAA 610 CCAAACGUCCUUAUCAGGACGACCAA 635 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26463,sp|AF216844.1|AF216844 Drosophila virilis clone p7.5-4 histone H4 gene, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 77 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26464,sp|AF216845.1|AF216845 Drosophila virilis clone p7.5-4 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 78 : 1265 1240 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 179 CCAAACGUCCUUUUCAGGACGACCAA 204 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26465,sp|AF216846.1|AF216846 Drosophila virilis clone p8.0-4 histone H4 gene, partial cds. ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 79 : 90 115 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 90 CAAUCGGUCCUUUUCAGGACCACCAA 115 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26466,sp|AF216847.1|AF216847 Drosophila virilis clone p8.0-4 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 80 : 1168 1143 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 179 CCAAACGUCCUUUUCAGGACGACCAA 204 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #26466,sp|AF216847.1|AF216847 Drosophila virilis clone p8.0-4 histone H2A gene, partial cds. ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 81 : 737 712 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 610 CCAAACGUCCUUUUCAGGACGACCAA 635 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #35000,sp|AF304122.1|AF304122 Caenorhabditis elegans histone H3 (2O113) mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 82 : 482 507 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 482 CCAACGGCCCUCUUUAGGGCCACAAA 507 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #39802,sp|AF356516.1|AF356516 Tetrapygus niger early histone H2B and early histone H3 genes, partial cds. ----isReversed: 0 ----hitSequence: CAAACGGCCCUUUUCAGGGCCACAAA hit 83 : 55 80 (fwd) 38.18 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGC:CUUUUCAG:GCCAC AA 55 CAAACGGCCCUUUUCAGGGCCACAAA 80 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #41779,sp|AF378198.1|AF378198 Rhynchosciara americana histone H1 (rah1), histone H3 (rah3), histone H4 (rah4), histone H2A (rah2a), and histone H2B (rah2b) g ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAU hit 84 : 4387 4412 (fwd) 37.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 4387 CAAAAGGCUCUUUUCAGAGCCACCAU 4412 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #41779,sp|AF378198.1|AF378198 Rhynchosciara americana histone H1 (rah1), histone H3 (rah3), histone H4 (rah4), histone H2A (rah2a), and histone H2B (rah2b) g ----isReversed: 1 ----hitSequence: GAAAACGCCCUUUUAAGGGCGACCAA hit 85 : 3375 3350 (rev) 28.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAA GC:CUUUU AG:GC ACCAA 1757 GAAAACGCCCUUUUAAGGGCGACCAA 1782 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv01.dat.fasta.gz ----sequence: #41779,sp|AF378198.1|AF378198 Rhynchosciara americana histone H1 (rah1), histone H3 (rah3), histone H4 (rah4), histone H2A (rah2a), and histone H2B (rah2b) g ----isReversed: 1 ----hitSequence: UAACCGGUCCUUUUCAGGACCAACAA hit 86 : 1874 1849 (rev) 28.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCA CAA 3258 UAACCGGUCCUUUUCAGGACCAACAA 3283 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #4139,sp|AF496623.1|AF496623 Crassostrea gigas clone a068 microsatellite sequence. ----isReversed: 1 ----hitSequence: AAAAAAGCCCUUUUCAGGGCUACCCA hit 87 : 449 424 (rev) 32.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAA:GC:CUUUUCAG:GC:ACC+A 93 AAAAAAGCCCUUUUCAGGGCUACCCA 118 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #4140,sp|AF496624.1|AF496624 Crassostrea gigas clone OysterA#23 microsatellite sequence. ----isReversed: 1 ----hitSequence: AAAAAAGCCCUUUUCAGGGCUACCCA hit 88 : 451 426 (rev) 32.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAA:GC:CUUUUCAG:GC:ACC+A 95 AAAAAAGCCCUUUUCAGGGCUACCCA 120 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #4141,sp|AF496625.1|AF496625 Crassostrea gigas clone OysterA#29 microsatellite sequence. ----isReversed: 1 ----hitSequence: AAAAAAGCCCUUUUCAGGGCUACCCA hit 89 : 455 430 (rev) 32.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAA:GC:CUUUUCAG:GC:ACC+A 95 AAAAAAGCCCUUUUCAGGGCUACCCA 120 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #4142,sp|AF496626.1|AF496626 Crassostrea gigas clone a076 microsatellite sequence. ----isReversed: 1 ----hitSequence: AAAAAAGCCCUUUUCAGGGCUACCCA hit 90 : 460 435 (rev) 32.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAA:GC:CUUUUCAG:GC:ACC+A 92 AAAAAAGCCCUUUUCAGGGCUACCCA 117 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #7834,sp|L11067.1|AFH342BA Acropora formosa histone H3 (H3), histone H2B (H2B), histone H2A (H2A), and histone H4 (H4) genes, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCACCAAU hit 91 : 431 456 (fwd) 26.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+ GCUCUUUU AGAGC C A 431 AAAACGGCUCUUUUAAGAGCACCAAU 456 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #7834,sp|L11067.1|AFH342BA Acropora formosa histone H3 (H3), histone H2B (H2B), histone H2A (H2A), and histone H4 (H4) genes, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUGUAGGAGCCACCAC hit 92 : 2585 2610 (fwd) 25.53 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUC U U GAGCCACCA 2585 AAAACGGCUCUUGUAGGAGCCACCAC 2610 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #7834,sp|L11067.1|AFH342BA Acropora formosa histone H3 (H3), histone H2B (H2B), histone H2A (H2A), and histone H4 (H4) genes, complete cds. ----isReversed: 1 ----hitSequence: AAAACGGCUCUUAUAGGAGCCAACAA hit 93 : 3159 3134 (rev) 27.07 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUC U U GAGCCA CAA 606 AAAACGGCUCUUAUAGGAGCCAACAA 631 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #7834,sp|L11067.1|AFH342BA Acropora formosa histone H3 (H3), histone H2B (H2B), histone H2A (H2A), and histone H4 (H4) genes, complete cds. ----isReversed: 1 ----hitSequence: ACAACGGCUCUUUUAGGAGCCAACAC hit 94 : 1432 1407 (rev) 28.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUC UUU GAGCCA CA 2333 ACAACGGCUCUUUUAGGAGCCAACAC 2358 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #7835,sp|M60509.1|AFH3AA Acropora formosa histone H3 protein (H3) gene, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCACCAAU hit 95 : 431 456 (fwd) 26.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+ GCUCUUUU AGAGC C A 431 AAAACGGCUCUUUUAAGAGCACCAAU 456 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #9414,sp|AK113063.1|AK113063 Ciona intestinalis cDNA, clone:ciad003h11, full insert sequence. ----isReversed: 0 ----hitSequence: AAAUCGGCCCUUUUCAGGGCCAACCU hit 96 : 964 989 (fwd) 27.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUUCAG:GCCA C+ 964 AAAUCGGCCCUUUUCAGGGCCAACCU 989 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #11693,sp|AK115342.1|AK115342 Ciona intestinalis cDNA, clone:cieg046b21, full insert sequence. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCCC hit 97 : 725 750 (fwd) 37.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACC+ 725 AAAACGGCUCUUUUCAGAGCCACCCC 750 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #15072,sp|X14816.1|ASRN5SB Artemia gene for 5S rRNA (pArt5H-b), I ----isReversed: 0 ----hitSequence: CCAACAGCCCUUUUAAGGGCUACAAA hit 98 : 125 150 (fwd) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+:GC:CUUUU AG:GC:AC AA 125 CCAACAGCCCUUUUAAGGGCUACAAA 150 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #15073,sp|X14815.1|ASRN5SC Artemia gene for 5S rRNA (pArt5H-a) ----isReversed: 0 ----hitSequence: CCAACAGCCCUUUUAAGGGCUACAAA hit 99 : 141 166 (fwd) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+:GC:CUUUU AG:GC:AC AA 141 CCAACAGCCCUUUUAAGGGCUACAAA 166 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #16171,sp|AY013575.1|AY013575 Haliotis kamtschatkana clone Hka37 microsatellite sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUUUUCAGGGCCACCCA hit 100 : 129 154 (fwd) 38.80 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CUUUUCAG:GCCACC+A 129 CCAACGGCCCUUUUCAGGGCCACCCA 154 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #16176,sp|AY013580.1|AY013580 Haliotis kamtschatkana clone Hka6 microsatellite sequence. ----isReversed: 0 ----hitSequence: CAAACGGCCCUUUUCAGGGCCACCAA hit 101 : 296 321 (fwd) 39.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGC:CUUUUCAG:GCCACCAA 296 CAAACGGCCCUUUUCAGGGCCACCAA 321 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #16795,sp|AY028698.1|AY028698 Trichinella spiralis histone H3 mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGUCCUUAUCAGGACCACUAU hit 102 : 489 514 (fwd) 29.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG::CUU UCAG::CCAC A 489 CCAACGGUCCUUAUCAGGACCACUAU 514 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #21762,sp|AY064471.1|AY064471 Aplysia californica histone H4 (His.H4) gene, complete cds. ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUAAGGGCCACAAC hit 103 : 461 486 (fwd) 32.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC A 461 AAACCGGCCCUUUUAAGGGCCACAAC 486 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #21763,sp|AY064472.1|AY064472 Aplysia californica histone H3 (His.H3) gene, complete cds. ----isReversed: 0 ----hitSequence: CGAACGGUCCUUUUCAGGACCAAACC hit 104 : 581 606 (fwd) 25.04 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GG::CUUUUCAG::CCA + 581 CGAACGGUCCUUUUCAGGACCAAACC 606 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #42709,sp|U21211.1|CD21211 Chironomus dorsalis histone H1-I gene, complete cds. ----isReversed: 0 ----hitSequence: AAAUCAGUCCUUUUCAGGACUACCAA hit 105 : 897 922 (fwd) 24.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +:G::CUUUUCAG::C:ACCAA 897 AAAUCAGUCCUUUUCAGGACUACCAA 922 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43096,sp|Z73102.1|CEB0035 Caenorhabditis elegans cosmid B0035 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 106 : 30858 30883 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 30858 CCAACGGCCCUCUUUAGGGCCACAAA 30883 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43096,sp|Z73102.1|CEB0035 Caenorhabditis elegans cosmid B0035 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 107 : 32759 32784 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 32759 CCAACGGCCCUCUUUAGGGCCACAAA 32784 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43096,sp|Z73102.1|CEB0035 Caenorhabditis elegans cosmid B0035 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 108 : 31688 31663 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 7796 CCAACGGCCCUCUUUAGGGCCACAAA 7821 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43336,sp|U41556.2|CEC25B8 Caenorhabditis elegans cosmid C25B8, complete sequence. ----isReversed: 0 ----hitSequence: CAAACAGCACUUUUCAGGGCAAACAA hit 109 : 2872 2897 (fwd) 25.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+:GC CUUUUCAG GC:A CAA 2872 CAAACAGCACUUUUCAGGGCAAACAA 2897 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43616,sp|L39939.1|CECPR6G Caenorhabditis elegans cathepsin B-like cysteine proteinase (cpr-6) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAACAGCACUUUUCAGGGCAAACAA hit 110 : 906 931 (fwd) 25.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+:GC CUUUUCAG GC:A CAA 906 CAAACAGCACUUUUCAGGGCAAACAA 931 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43756,sp|Z81495.1|CEF08G2 Caenorhabditis elegans cosmid F08G2 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 111 : 1558 1583 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 1558 CCAACGGCCCUCUUUAGGGCCACAAA 1583 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43756,sp|Z81495.1|CEF08G2 Caenorhabditis elegans cosmid F08G2 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 112 : 2059 2034 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 28788 CCAACGGCCCUCUUUAGGGCCACAAA 28813 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43756,sp|Z81495.1|CEF08G2 Caenorhabditis elegans cosmid F08G2 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACACA hit 113 : 516 491 (rev) 30.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC +A 30331 CCAACGGCCCUCUUUAGGGCCACACA 30356 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43895,sp|Z68336.1|CEF22B3 Caenorhabditis elegans cosmid F22B3 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 114 : 2086 2111 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 2086 CCAACGGCCCUCUUUAGGGCCACAAA 2111 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #43895,sp|Z68336.1|CEF22B3 Caenorhabditis elegans cosmid F22B3 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 115 : 1017 992 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 29464 CCAACGGCCCUCUUUAGGGCCACAAA 29489 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44015,sp|U40934.1|CEF35H10 Caenorhabditis elegans cosmid F35H10, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUU hit 116 : 36284 36309 (fwd) 26.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC 36284 CCAACGGCCCUCUUUAGGGCCACAUU 36309 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44015,sp|U40934.1|CEF35H10 Caenorhabditis elegans cosmid F35H10, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 117 : 35214 35189 (rev) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 1602 CCAACGGCCCUCUUUAGGGCCACAAU 1627 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44198,sp|Z82271.1|CEF54E12 Caenorhabditis elegans cosmid F54E12 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 118 : 5216 5241 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 5216 CCAACGGCCCUCUUUAGGGCCACAAA 5241 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44198,sp|Z82271.1|CEF54E12 Caenorhabditis elegans cosmid F54E12 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 119 : 7169 7194 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 7169 CCAACGGCCCUCUUUAGGGCCACAAA 7194 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44198,sp|Z82271.1|CEF54E12 Caenorhabditis elegans cosmid F54E12 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 120 : 6046 6021 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 7832 CCAACGGCCCUCUUUAGGGCCACAAA 7857 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44198,sp|Z82271.1|CEF54E12 Caenorhabditis elegans cosmid F54E12 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 121 : 4145 4120 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 9733 CCAACGGCCCUCUUUAGGGCCACAAA 9758 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44221,sp|U58750.1|CEF55G1 Caenorhabditis elegans cosmid F55G1, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 122 : 22772 22797 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 22772 CCAACGGCCCUCUUUAGGGCCACAAA 22797 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44221,sp|U58750.1|CEF55G1 Caenorhabditis elegans cosmid F55G1, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 123 : 24532 24557 (fwd) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 24532 CCAACGGCCCUCUUUAGGGCCACAAU 24557 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44221,sp|U58750.1|CEF55G1 Caenorhabditis elegans cosmid F55G1, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 124 : 23463 23438 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 13892 CCAACGGCCCUCUUUAGGGCCACAAA 13917 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44221,sp|U58750.1|CEF55G1 Caenorhabditis elegans cosmid F55G1, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 125 : 21630 21605 (rev) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 15725 CCAACGGCCCUCUUUAGGGCCACAAU 15750 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44315,sp|Z92789.1|CEH02I12 Caenorhabditis elegans fosmid H02I12 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 126 : 30206 30231 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 30206 CCAACGGCCCUCUUUAGGGCCACAAA 30231 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44315,sp|Z92789.1|CEH02I12 Caenorhabditis elegans fosmid H02I12 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 127 : 29083 29058 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 5005 CCAACGGCCCUCUUUAGGGCCACAAA 5030 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44364,sp|X15634.1|CEHIS10 C. elegans core histone genes H4(his-10) and H3(his-9) ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 128 : 1233 1258 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 1233 CCAACGGCCCUCUUUAGGGCCACAAA 1258 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44364,sp|X15634.1|CEHIS10 C. elegans core histone genes H4(his-10) and H3(his-9) ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 129 : 151 126 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 1150 CCAACGGCCCUCUUUAGGGCCACAAA 1175 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44365,sp|X15633.1|CEHIS12 C. elegans core histone genes H2A(his12) and H2B(his11) ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 130 : 174 149 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 1066 CCAACGGCCCUCUUUAGGGCCACAAA 1091 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44425,sp|U41625.1|CEK03A1 Caenorhabditis elegans cosmid K03A1, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 131 : 33871 33896 (fwd) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 33871 CCAACGGCCCUCUUUAGGGCCACAUA 33896 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #44425,sp|U41625.1|CEK03A1 Caenorhabditis elegans cosmid K03A1, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 132 : 32829 32804 (rev) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 2399 CCAACGGCCCUCUUUAGGGCCACAUA 2424 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45149,sp|Z93388.1|CET10C6 Caenorhabditis elegans cosmid T10C6 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 133 : 29299 29324 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 29299 CCAACGGCCCUCUUUAGGGCCACAAA 29324 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45149,sp|Z93388.1|CET10C6 Caenorhabditis elegans cosmid T10C6 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 134 : 30949 30974 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 30949 CCAACGGCCCUCUUUAGGGCCACAAA 30974 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45149,sp|Z93388.1|CET10C6 Caenorhabditis elegans cosmid T10C6 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 135 : 29900 29875 (rev) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 3552 CCAACGGCCCUCUUUAGGGCCACAUA 3577 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45149,sp|Z93388.1|CET10C6 Caenorhabditis elegans cosmid T10C6 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUU hit 136 : 28191 28166 (rev) 26.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC 5261 CCAACGGCCCUCUUUAGGGCCACAUU 5286 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45244,sp|Z81128.2|CET23D8 Caenorhabditis elegans cosmid T23D8 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 137 : 25556 25531 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 9021 CCAACGGCCCUCUUUAGGGCCACAAA 9046 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45583,sp|U64845.1|CEUF45F2 Caenorhabditis elegans cosmid F45F2, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 138 : 24542 24567 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 24542 CCAACGGCCCUCUUUAGGGCCACAAA 24567 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45583,sp|U64845.1|CEUF45F2 Caenorhabditis elegans cosmid F45F2, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGAGCCACAAA hit 139 : 25727 25752 (fwd) 26.63 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CU UU AG GCCAC AA 25727 CCAACGGCCCUCUUUAGAGCCACAAA 25752 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45583,sp|U64845.1|CEUF45F2 Caenorhabditis elegans cosmid F45F2, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 140 : 23494 23469 (rev) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 6059 CCAACGGCCCUCUUUAGGGCCACAUA 6084 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45583,sp|U64845.1|CEUF45F2 Caenorhabditis elegans cosmid F45F2, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUU hit 141 : 21663 21638 (rev) 26.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC 7890 CCAACGGCCCUCUUUAGGGCCACAUU 7915 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 142 : 11360 11385 (fwd) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 11360 CCAACGGCCCUCUUUAGGGCCACAUA 11385 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUAAGGGCCACAAA hit 143 : 13822 13847 (fwd) 32.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 13822 CCAACGGCCCUCUUAAGGGCCACAAA 13847 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGAGCCACAAA hit 144 : 17036 17061 (fwd) 26.63 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CU UU AG GCCAC AA 17036 CCAACGGCCCUCUUUAGAGCCACAAA 17061 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 145 : 19437 19462 (fwd) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 19437 CCAACGGCCCUCUUUAGGGCCACAAU 19462 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAUA hit 146 : 18390 18365 (rev) 28.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 24788 CCAACGGCCCUCUUUAGGGCCACAUA 24813 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUAAGGGCCACAAA hit 147 : 15929 15904 (rev) 32.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 27249 CCAACGGCCCUCUUAAGGGCCACAAA 27274 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 148 : 12715 12690 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 30463 CCAACGGCCCUCUUUAGGGCCACAAA 30488 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #45609,sp|U64843.2|CEUK06C4 Caenorhabditis elegans cosmid K06C4, complete sequence. ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAU hit 149 : 10310 10285 (rev) 29.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC A 32868 CCAACGGCCCUCUUUAGGGCCACAAU 32893 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACACA hit 150 : 24921 24946 (fwd) 30.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC +A 24921 CCAACGGCCCUCUUUAGGGCCACACA 24946 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 151 : 26816 26841 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 26816 CCAACGGCCCUCUUUAGGGCCACAAA 26841 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACACA hit 152 : 28359 28384 (fwd) 30.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC +A 28359 CCAACGGCCCUCUUUAGGGCCACACA 28384 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 153 : 30254 30279 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 30254 CCAACGGCCCUCUUUAGGGCCACAAA 30279 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 0 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 154 : 32028 32053 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 32028 CCAACGGCCCUCUUUAGGGCCACAAA 32053 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 155 : 30945 30920 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 1480 CCAACGGCCCUCUUUAGGGCCACAAA 1505 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 156 : 29171 29146 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 3254 CCAACGGCCCUCUUUAGGGCCACAAA 3279 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 157 : 27317 27292 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 5108 CCAACGGCCCUCUUUAGGGCCACAAA 5133 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 158 : 25733 25708 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 6692 CCAACGGCCCUCUUUAGGGCCACAAA 6717 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #46145,sp|Z83245.4|CEZK131 Caenorhabditis elegans cosmid ZK131 ----isReversed: 1 ----hitSequence: CCAACGGCCCUCUUUAGGGCCACAAA hit 159 : 23879 23854 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CU UU AG:GCCAC AA 8546 CCAACGGCCCUCUUUAGGGCCACAAA 8571 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47624,sp|L28726.1|CTHHI1A Chironomus thummi piger histone H1-III-1 gene, complete CDS. ----isReversed: 0 ----hitSequence: AAAAUAGUCCUUUUCAGGACUACCAA hit 160 : 1034 1059 (fwd) 25.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA :G::CUUUUCAG::C:ACCAA 1034 AAAAUAGUCCUUUUCAGGACUACCAA 1059 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47635,sp|L29105.1|CTHIH1E Chironomus tentans (clone EStent1) histone H1e gene, complete cds. ----isReversed: 0 ----hitSequence: AAAUCAGUCCUUUUCAGGACUACCAA hit 161 : 1734 1759 (fwd) 24.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +:G::CUUUUCAG::C:ACCAA 1734 AAAUCAGUCCUUUUCAGGACUACCAA 1759 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47636,sp|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4 ----isReversed: 0 ----hitSequence: UAAAAGGUCCUUUUCAGGACCACAAA hit 162 : 5789 5814 (fwd) 33.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGG::CUUUUCAG::CCAC AA 5789 UAAAAGGUCCUUUUCAGGACCACAAA 5814 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47636,sp|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4 ----isReversed: 1 ----hitSequence: AAAAAGGUCUUUUUAAAGACCAACAA hit 163 : 4558 4533 (rev) 26.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:::UUUU A:::CCA CAA 2139 AAAAAGGUCUUUUUAAAGACCAACAA 2164 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47637,sp|X56335.1|CTHIST Chironomus thummi histone H1, H2A, H2B, H3, H4 genes with TFB1 insertion (foldback transposable element) ----isReversed: 1 ----hitSequence: UAAACCGUCCUUUUUAGGGCGACCAA hit 164 : 3095 3070 (rev) 25.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+ G::CUUUU AG::C ACCAA 3177 UAAACCGUCCUUUUUAGGGCGACCAA 3202 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #47637,sp|X56335.1|CTHIST Chironomus thummi histone H1, H2A, H2B, H3, H4 genes with TFB1 insertion (foldback transposable element) ----isReversed: 1 ----hitSequence: AGAACGGUCUUUUUCAAGACCACCAA hit 165 : 1269 1244 (rev) 25.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GG:::UUUUCA:::CCACCAA 5003 AGAACGGUCUUUUUCAAGACCACCAA 5028 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49325,sp|X52576.1|DHHIST D. HYDEI HISTONE GENES ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 166 : 3253 3278 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 3253 CAAUCGGUCCUUUUCAGGACCACCAA 3278 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49325,sp|X52576.1|DHHIST D. HYDEI HISTONE GENES ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUAUCAGGGCCUCAAA hit 167 : 4864 4889 (fwd) 29.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUU UCAG:GCC C AA 4864 CAAAAGGCCCUUAUCAGGGCCUCAAA 4889 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49325,sp|X52576.1|DHHIST D. HYDEI HISTONE GENES ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 168 : 3805 3780 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 1363 CCAAACGUCCUUUUCAGGACGACCAA 1388 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49325,sp|X52576.1|DHHIST D. HYDEI HISTONE GENES ----isReversed: 1 ----hitSequence: AAAUCGGUCCUUUUCAGGACCACAAU hit 169 : 2136 2111 (rev) 27.14 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GG::CUUUUCAG::CCAC A 3032 AAAUCGGUCCUUUUCAGGACCACAAU 3057 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49326,sp|X17072.1|DHHISTON Drosophila hydei histone DNA repeat unit with genes for histones H1, H3, H4, H2A and H2B ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAA hit 170 : 3256 3281 (fwd) 30.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCAA 3256 CAAUCGGUCCUUUUCAGGACCACCAA 3281 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49326,sp|X17072.1|DHHISTON Drosophila hydei histone DNA repeat unit with genes for histones H1, H3, H4, H2A and H2B ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACAAA hit 171 : 4855 4880 (fwd) 38.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCAC AA 4855 CAAAAGGCCCUUUUCAGGGCCACAAA 4880 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49326,sp|X17072.1|DHHISTON Drosophila hydei histone DNA repeat unit with genes for histones H1, H3, H4, H2A and H2B ----isReversed: 1 ----hitSequence: CCAAACGUCCUUUUCAGGACGACCAA hit 172 : 3796 3771 (rev) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA G::CUUUUCAG::C ACCAA 1358 CCAAACGUCCUUUUCAGGACGACCAA 1383 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49326,sp|X17072.1|DHHISTON Drosophila hydei histone DNA repeat unit with genes for histones H1, H3, H4, H2A and H2B ----isReversed: 1 ----hitSequence: AAAUCGGUCCUUUUCAGGACCACAAU hit 173 : 2137 2112 (rev) 27.14 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GG::CUUUUCAG::CCAC A 3017 AAAUCGGUCCUUUUCAGGACCACAAU 3042 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv02.dat.fasta.gz ----sequence: #49447,sp|X07772.1|DIHIST43 Sea star (D.imbricata) histone H4 3' flanking region ----isReversed: 0 ----hitSequence: AAAACGGCUCUAUUCAGAGCCACCAC hit 174 : 25 50 (fwd) 33.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCU UUCAGAGCCACCA 25 AAAACGGCUCUAUUCAGAGCCACCAC 50 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2833,sp|X60225.1|DMH1H3 D.melanogaster Histone H1-H3 intergenic spacer ----isReversed: 1 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 175 : 1393 1368 (rev) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 8 UAAUCGGUCCUUUUCAGGACCACAAA 33 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2891,sp|X13788.1|DMHISIG D.melanogaster DNA for histone gene cluster intergenic spacer ----isReversed: 1 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 176 : 1022 997 (rev) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 143 UAAUCGGUCCUUUUCAGGACCACAAA 168 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2893,sp|X14215.1|DMHISTL Drosophila histone gene cluster, L form of repeating unit (5 kB) ----isReversed: 0 ----hitSequence: AAAACGGCCCUUUUCAGGGCCACAAU hit 177 : 817 842 (fwd) 35.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUUCAG:GCCAC A 817 AAAACGGCCCUUUUCAGGGCCACAAU 842 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2893,sp|X14215.1|DMHISTL Drosophila histone gene cluster, L form of repeating unit (5 kB) ----isReversed: 0 ----hitSequence: CAAUCGGUCCUUUUCAGGACCACCAU hit 178 : 4412 4437 (fwd) 28.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A +GG::CUUUUCAG::CCACCA 4412 CAAUCGGUCCUUUUCAGGACCACCAU 4437 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2893,sp|X14215.1|DMHISTL Drosophila histone gene cluster, L form of repeating unit (5 kB) ----isReversed: 1 ----hitSequence: CAAACCGUCCUUUUCAGGACGACCAA hit 179 : 4806 4781 (rev) 30.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+ G::CUUUUCAG::C ACCAA 236 CAAACCGUCCUUUUCAGGACGACCAA 261 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2893,sp|X14215.1|DMHISTL Drosophila histone gene cluster, L form of repeating unit (5 kB) ----isReversed: 1 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 180 : 3318 3293 (rev) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 1724 UAAUCGGUCCUUUUCAGGACCACAAA 1749 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #2911,sp|Z29082.1|DMHOMEO D.melanogaster (Oregon) Lbe homeodomain region ----isReversed: 0 ----hitSequence: UAAUCGGCUCUUUUAAGAGCCACCAA hit 181 : 1040 1065 (fwd) 31.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GGCUCUUUU AGAGCCACCAA 1040 UAAUCGGCUCUUUUAAGAGCCACCAA 1065 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #5678,sp|AB003784.1|DSAB3784 Fruitfly DNA for Histone H3, complete cds. ----isReversed: 0 ----hitSequence: UAAUCGGUCCUUUUCAGGACCACAAA hit 182 : 786 811 (fwd) 27.74 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A +GG::CUUUUCAG::CCAC AA 786 UAAUCGGUCCUUUUCAGGACCACAAA 811 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #6651,sp|U82925.1|DVU82925 Drosophila virilis histone H3 (H3) gene, partial cds. ----isReversed: 0 ----hitSequence: AAAUCGGUCCUUUUCAGGACCACAAA hit 183 : 187 212 (fwd) 29.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GG::CUUUUCAG::CCAC AA 187 AAAUCGGUCCUUUUCAGGACCACAAA 212 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #6652,sp|U82926.1|DVU82926 Drosophila virilis histone gene cluster, untranslated sequence. ----isReversed: 1 ----hitSequence: CCAACCGUCCUUUUCAGGACGACCAA hit 184 : 121 96 (rev) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+ G::CUUUUCAG::C ACCAA 20 CCAACCGUCCUUUUCAGGACGACCAA 45 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #6661,sp|U88330.1|DVU88330 Drosophila virilis histone H2B (H2B) gene and histone H3 (H3) gene, partial cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACAAA hit 185 : 253 278 (fwd) 38.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCAC AA 253 CAAAAGGCCCUUUUCAGGGCCACAAA 278 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #6662,sp|U88331.1|DVU88331 Drosophila virilis histone H2B (H2B) gene and histone H3 (H3) gene, partial cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACAAA hit 186 : 251 276 (fwd) 38.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCAC AA 251 CAAAAGGCCCUUUUCAGGGCCACAAA 276 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #6662,sp|U88331.1|DVU88331 Drosophila virilis histone H2B (H2B) gene and histone H3 (H3) gene, partial cds. ----isReversed: 1 ----hitSequence: AAAUCGGUCCUUUUCAGGACCACAAA hit 187 : 937 912 (rev) 29.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GG::CUUUUCAG::CCAC AA 65 AAAUCGGUCCUUUUCAGGACCACAAA 90 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #7588,sp|L41834.1|EMNUPR Ensis minor (clone 1/6) nuclear protein mRNA, complete cds. ----isReversed: 0 ----hitSequence: AACCCGGCCCUCUUAAGGGCCACCAA hit 188 : 1559 1584 (fwd) 27.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ +GGC:CU UU AG:GCCACCAA 1559 AACCCGGCCCUCUUAAGGGCCACCAA 1584 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #9821,sp|Z46225.1|HTHISH2B H.tubulosa gene encoding histone H2B ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGGGCCAUCAA hit 189 : 538 563 (fwd) 28.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUU AG GCCA CAA 538 CCAACGGCUCUUUUAAGGGCCAUCAA 563 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #9822,sp|Z46226.1|HTHISH4 H.tubulosa gene encoding histone H4 ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGGGCCAUCAA hit 190 : 766 791 (fwd) 28.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUU AG GCCA CAA 766 CCAACGGCUCUUUUAAGGGCCAUCAA 791 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11517,sp|X00593.1|LPH3H4 Lytechinus pictus H3 and H4 gene ----isReversed: 0 ----hitSequence: AAACCGGCUCUUUUCAGAGCCACUAA hit 191 : 1913 1938 (fwd) 35.12 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGCUCUUUUCAGAGCCAC AA 1913 AAACCGGCUCUUUUCAGAGCCACUAA 1938 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11517,sp|X00593.1|LPH3H4 Lytechinus pictus H3 and H4 gene ----isReversed: 1 ----hitSequence: AAACCGGCUCUUUUCAGAGCCACCAA hit 192 : 82 57 (rev) 36.93 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGCUCUUUUCAGAGCCACCAA 1948 AAACCGGCUCUUUUCAGAGCCACCAA 1973 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11518,sp|X00628.1|LPH3PLPA Lytechinus pictus early stage H3 gene from pLpa ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAU hit 193 : 551 576 (fwd) 37.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCA 551 AAAACGGCUCUUUUCAGAGCCACCAU 576 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11526,sp|X04488.1|LPHISH15 Lytechinus pictus late histone H1 gene ----isReversed: 0 ----hitSequence: CCAACGGCUCUUAUCAGAGCCACCCA hit 194 : 1128 1153 (fwd) 36.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUU UCAGAGCCACC+A 1128 CCAACGGCUCUUAUCAGAGCCACCCA 1153 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11528,sp|X04384.1|LPHISH2B Sea urchin (L.pictus) gene for testis specific histone H2B-2 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUAUCAGAGCCACCAA hit 195 : 652 677 (fwd) 37.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUU UCAGAGCCACCAA 652 CAAACGGCUCUUAUCAGAGCCACCAA 677 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #11529,sp|J01175.1|LPHISL34 Sea urchin (L.pictus) late-stage histone H3 and H4 genes. ----isReversed: 1 ----hitSequence: UAAACGGCUCUUUUUAGAACCACCAA hit 196 : 368 343 (rev) 30.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+GG UCUUUU AGA CCACCAA 1766 UAAACGGCUCUUUUUAGAACCACCAA 1791 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12153,sp|AJ416421.1|MCA416421 Mytilus californianus h1 gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 197 : 911 936 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 911 CCAAAAGCCCUUUUAAGGGCUACCCA 936 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12177,sp|AJ416422.1|MCH416422 Mytilus chilensis h1 gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 198 : 903 928 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 903 CCAAAAGCCCUUUUAAGGGCUACCCA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12326,sp|AJ224069.1|MEAJ4069 Mytilus edulis H1 histone gene, clone pME09 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 199 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12327,sp|AJ224070.1|MEAJ4070 Mytilus edulis H1 histone gene, clone pME10 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 200 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12328,sp|AJ224071.1|MEAJ4071 Mytilus edulis H1 histone gene, clone pME12 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 201 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12329,sp|AJ224072.1|MEAJ4072 Mytilus edulis H1 histone gene, clone pME13 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 202 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12330,sp|AJ224073.1|MEAJ4073 Mytilus edulis H1 histone gene, clone pME21 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 203 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12331,sp|AJ224074.1|MEAJ4074 Mytilus edulis H1 histone gene, clone pME33 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 204 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12332,sp|AJ224075.1|MEAJ4075 Mytilus edulis H1 histone gene, clone pME37 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 205 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12333,sp|AJ224076.1|MEAJ4076 Mytilus edulis H1 histone gene, clone pME40 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 206 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12334,sp|AJ224077.1|MEAJ4077 Mytilus edulis H1 histone gene, clone pME49 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 207 : 975 1000 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 975 CCAAAAGCCCUUUUAAGGGCUACCCA 1000 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12354,sp|AJ416423.1|MED416423 Mytilus edulis h1 gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 208 : 911 936 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 911 CCAAAAGCCCUUUUAAGGGCUACCCA 936 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12363,sp|AJ492923.1|MED492923 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW06 ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 209 : 997 1022 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 997 ACAACGGCCCUUUUCAGGGCCACCAA 1022 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12363,sp|AJ492923.1|MED492923 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW06 ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 210 : 2874 2899 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 2874 ACAACGGCCCUUUUCAGGGCCACCAA 2899 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12363,sp|AJ492923.1|MED492923 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW06 ----isReversed: 0 ----hitSequence: AUAACGGCCCUUUUCAGGGCCACCAA hit 211 : 4562 4587 (fwd) 34.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGC:CUUUUCAG:GCCACCAA 4562 AUAACGGCCCUUUUCAGGGCCACCAA 4587 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12363,sp|AJ492923.1|MED492923 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW06 ----isReversed: 1 ----hitSequence: CAAACGGCCCUUUUCAGGGCCACCAA hit 212 : 1793 1768 (rev) 39.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGC:CUUUUCAG:GCCACCAA 3836 CAAACGGCCCUUUUCAGGGCCACCAA 3861 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12364,sp|AJ492924.1|MED492924 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW15 ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 213 : 499 524 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 499 ACAACGGCCCUUUUCAGGGCCACCAA 524 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12364,sp|AJ492924.1|MED492924 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW15 ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 214 : 2291 2316 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 2291 ACAACGGCCCUUUUCAGGGCCACCAA 2316 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12364,sp|AJ492924.1|MED492924 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW15 ----isReversed: 0 ----hitSequence: AUAACGGCCCUUUUAAGGGCCACCAA hit 215 : 4168 4193 (fwd) 33.21 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGC:CUUUU AG:GCCACCAA 4168 AUAACGGCCCUUUUAAGGGCCACCAA 4193 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12364,sp|AJ492924.1|MED492924 Mytilus edulis h4 gene, h2B gene, h2A gene and h3 gene, cluster UW15 ----isReversed: 1 ----hitSequence: CAAACGGCCCUUUUCAGGGCCACCAA hit 216 : 1209 1184 (rev) 39.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGC:CUUUUCAG:GCCACCAA 4460 CAAACGGCCCUUUUCAGGGCCACCAA 4485 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12365,sp|AJ492925.1|MED492925 Mytilus edulis h4 gene for histone H4 and h3 gene for histone H3, cluster UW27 ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 217 : 1247 1272 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 1247 ACAACGGCCCUUUUCAGGGCCACCAA 1272 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12365,sp|AJ492925.1|MED492925 Mytilus edulis h4 gene for histone H4 and h3 gene for histone H3, cluster UW27 ----isReversed: 0 ----hitSequence: AUAACGGCCCUUUUCAGGGCCACCAA hit 218 : 3024 3049 (fwd) 34.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGC:CUUUUCAG:GCCACCAA 3024 AUAACGGCCCUUUUCAGGGCCACCAA 3049 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #12437,sp|AJ416424.1|MGA416424 Mytilus galloprovincialis h1 gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 219 : 910 935 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 910 CCAAAAGCCCUUUUAAGGGCUACCCA 935 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13058,sp|AJ416425.1|MTR416425 Mytilus trossulus h1 gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAAGCCCUUUUAAGGGCUACCCA hit 220 : 910 935 (fwd) 31.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GC:CUUUU AG:GC:ACC+A 910 CCAAAAGCCCUUUUAAGGGCUACCCA 935 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13644,sp|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene ----isReversed: 0 ----hitSequence: AACCCGGCCCUUUUUAGGGCCACAAA hit 221 : 1505 1530 (fwd) 30.18 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+ +GGC:CUUUU AG:GCCAC AA 1505 AACCCGGCCCUUUUUAGGGCCACAAA 1530 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13644,sp|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene ----isReversed: 0 ----hitSequence: UAAAUGGCUCUUUUCAGAGCCACAAA hit 222 : 2742 2767 (fwd) 32.12 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA GGCUCUUUUCAGAGCCAC AA 2742 UAAAUGGCUCUUUUCAGAGCCACAAA 2767 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13644,sp|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUUAGGGCCACAUA hit 223 : 4107 4132 (fwd) 30.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC A 4107 AAACCGGCCCUUUUUAGGGCCACAUA 4132 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13644,sp|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene ----isReversed: 1 ----hitSequence: AAAUCGGCCCUUUUUAGGGCCACAAA hit 224 : 3110 3085 (rev) 30.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC AA 2596 AAAUCGGCCCUUUUUAGGGCCACAAA 2621 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13644,sp|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene ----isReversed: 1 ----hitSequence: AAACCGGCCCUUUUCAGGGCCACAAA hit 225 : 514 489 (rev) 35.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUUCAG:GCCAC AA 5192 AAACCGGCCCUUUUCAGGGCCACAAA 5217 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13645,sp|AJ494849.1|ODI494849 Oikopleura dioica H2A.3 gene for histone h2A.3 ----isReversed: 0 ----hitSequence: AAACAGGCCCUUUUAAGGGCCACAGU hit 226 : 490 515 (fwd) 26.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A AGGC:CUUUU AG:GCCAC 490 AAACAGGCCCUUUUAAGGGCCACAGU 515 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13646,sp|AJ494850.1|ODI494850 Oikopleura dioica H3.2 gene for histone h3.2 ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUUAGGGCCACAAA hit 227 : 894 919 (fwd) 32.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC AA 894 AAACCGGCCCUUUUUAGGGCCACAAA 919 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13647,sp|AJ494851.1|ODI494851 Oikopleura dioica partial H2A.2 gene for histone h2A.2 ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUAAGGGCCAUAUA hit 228 : 853 878 (fwd) 24.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCA A 853 AAACCGGCCCUUUUAAGGGCCAUAUA 878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13647,sp|AJ494851.1|ODI494851 Oikopleura dioica partial H2A.2 gene for histone h2A.2 ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUAAGGGCCACAUA hit 229 : 1625 1650 (fwd) 30.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC A 1625 AAACCGGCCCUUUUAAGGGCCACAUA 1650 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13648,sp|AJ494852.1|ODI494852 Oikopleura dioica partial H2A.4 gene for histone H2A.4 ----isReversed: 0 ----hitSequence: AAACAGGCCCUUUUUAGGGCCACAAU hit 230 : 1548 1573 (fwd) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A AGGC:CUUUU AG:GCCAC A 1548 AAACAGGCCCUUUUUAGGGCCACAAU 1573 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13648,sp|AJ494852.1|ODI494852 Oikopleura dioica partial H2A.4 gene for histone H2A.4 ----isReversed: 1 ----hitSequence: AAACCGGCCCUUUUCAGGGCCACAAA hit 231 : 518 493 (rev) 35.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUUCAG:GCCAC AA 1486 AAACCGGCCCUUUUCAGGGCCACAAA 1511 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13649,sp|AJ494853.1|ODI494853 Oikopleura dioica mRNA for histone H2A.1a (H2A.1a gene) ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUUAGGGCCACAAA hit 232 : 400 425 (fwd) 32.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC AA 400 AAACCGGCCCUUUUUAGGGCCACAAA 425 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13650,sp|AJ494854.1|ODI494854 Oikopleura dioica partial mRNA for histone h2A.1b (H2a.1b gene) ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUUAGGGCCACAAA hit 233 : 374 399 (fwd) 32.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC AA 374 AAACCGGCCCUUUUUAGGGCCACAAA 399 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13651,sp|AJ494855.1|ODI494855 Oikopleura dioica partial mRNA for histone h4 (H4 gene) ----isReversed: 0 ----hitSequence: AAACCGGCCCUUUUUAGGGCCACAAA hit 234 : 345 370 (fwd) 32.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGC:CUUUU AG:GCCAC AA 345 AAACCGGCCCUUUUUAGGGCCACAAA 370 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #13652,sp|AJ494856.1|ODI494856 Oikopleura dioica partial mRNA for histone h1.2 (H1.2 gene) ----isReversed: 0 ----hitSequence: UAAAUGGCUCUUUUCAGAGCCACAAA hit 235 : 529 554 (fwd) 32.12 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA GGCUCUUUUCAGAGCCAC AA 529 UAAAUGGCUCUUUUCAGAGCCACAAA 554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #14655,sp|X54112.1|PBH4H3 P.brevispinus histone genes H4 and H3 ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCAC hit 236 : 452 477 (fwd) 38.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCA 452 ACAACGGCUCUUUUCAGAGCCACCAC 477 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #14655,sp|X54112.1|PBH4H3 P.brevispinus histone genes H4 and H3 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAC hit 237 : 1666 1691 (fwd) 38.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCA 1666 AAAACGGCUCUUUUCAGAGCCACCAC 1691 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #14657,sp|X07771.1|PBHIST43 Sea star (P.brevispinus) histone H4 3' flanking region ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCAC hit 238 : 6 31 (fwd) 38.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCA 6 ACAACGGCUCUUUUCAGAGCCACCAC 31 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #14977,sp|X53330.1|PDHISTCL P.dumerilii histone gene cluster for core histones H2A, H2B, H3 and H4 ----isReversed: 1 ----hitSequence: ACAACCGCCAUUUUAAUGGCCACCAA hit 239 : 2229 2204 (rev) 26.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+ GC::UUUU A::GC ACCAA 3824 ACAACCGCCAUUUUAAUGGCCACCAA 3849 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17038,sp|X54114.1|PHH4H3 P.helianthoides histone genes H4 and H3 ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCAA hit 240 : 494 519 (fwd) 40.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCAA 494 ACAACGGCUCUUUUCAGAGCCACCAA 519 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17038,sp|X54114.1|PHH4H3 P.helianthoides histone genes H4 and H3 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAC hit 241 : 1577 1602 (fwd) 38.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCA 1577 AAAACGGCUCUUUUCAGAGCCACCAC 1602 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17250,sp|Y09062.1|PLH2AGENE P.lividus H2A gene ----isReversed: 0 ----hitSequence: UCAACGGCCCUUAUCAGGGCCACCAA hit 242 : 690 715 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAA+GGC:CUU UCAG:GCCACCAA 690 UCAACGGCCCUUAUCAGGGCCACCAA 715 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17258,sp|M25281.1|PLHISH2H P.lividus histone H3 and H2A genes, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAC hit 243 : 899 924 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCA 899 CAAACGGCUCUUUUCAGAGCCACCAC 924 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17258,sp|M25281.1|PLHISH2H P.lividus histone H3 and H2A genes, complete cds. ----isReversed: 0 ----hitSequence: UCAACGGCCCUUAUCAGGGCCACCAA hit 244 : 2133 2158 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAA+GGC:CUU UCAG:GCCACCAA 2133 UCAACGGCCCUUAUCAGGGCCACCAA 2158 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17363,sp|Y16588.1|PLY16588 Paracentrotus lividus histone H4 gene, early subtype ----isReversed: 0 ----hitSequence: AUAACGGCUCUUUUCAGAGCCACCAA hit 245 : 685 710 (fwd) 35.18 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGCUCUUUUCAGAGCCACCAA 685 AUAACGGCUCUUUUCAGAGCCACCAA 710 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17468,sp|V01143.1|PMHIS7 Sea urchin (P. miliaris) gene for histones H4, H2B, H3, H2A and H1 (in that order, containing many sequence gaps). (see also

>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCA 5499 ACAACGGCUCUUUUCAGAGCCACCAC 5524 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17474,sp|M25169.1|PMHISAAE Sea urchin histone gene termination region of h22. ----isReversed: 0 ----hitSequence: AUAACGGCUCUUUUCAGAGCCACCAA hit 247 : 24 49 (fwd) 35.18 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGCUCUUUUCAGAGCCACCAA 24 AUAACGGCUCUUUUCAGAGCCACCAA 49 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17475,sp|M25170.1|PMHISAAF Sea urchin histone gene termination region of h22. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAC hit 248 : 32 57 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCA 32 CAAACGGCUCUUUUCAGAGCCACCAC 57 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17476,sp|M10556.1|PMHISB1 P.miliaris histone H4 gene, clone h19, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAA hit 249 : 737 762 (fwd) 40.10 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCAA 737 CAAACGGCUCUUUUCAGAGCCACCAA 762 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17477,sp|M10557.1|PMHISB21 P.miliaris histone H2B gene, clone h19, complete cds, clone h19. ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACACA hit 250 : 790 815 (fwd) 37.60 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCAC +A 790 ACAACGGCCCUUUUCAGGGCCACACA 815 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17478,sp|M10558.1|PMHISB3 P.miliaris histone H3 gene, clone h19, complete cds, clone h19. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAC hit 251 : 738 763 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCA 738 CAAACGGCUCUUUUCAGAGCCACCAC 763 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17479,sp|M10559.1|PMHISB41 P.miliaris histone H2A gene, clone h19, complete cds, clone h19. ----isReversed: 0 ----hitSequence: UCAACGGCCCUUAUCAGGGCCACCAA hit 252 : 818 843 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAA+GGC:CUU UCAG:GCCACCAA 818 UCAACGGCCCUUAUCAGGGCCACCAA 843 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17480,sp|M10645.1|PMHISB9 Psammechinus miliaris histone H1 gene, clone h19, 3' flank. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAA hit 253 : 31 56 (fwd) 40.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCAA 31 AAAACGGCUCUUUUCAGAGCCACCAA 56 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17481,sp|M12542.1|PMHISH01 Psammechinus miliaris histone H2A precursor, gene, partial cds. ----isReversed: 0 ----hitSequence: ACAACGGCCCUUAUCAGGGCCACCAA hit 254 : 5 30 (fwd) 37.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUU UCAG:GCCACCAA 5 ACAACGGCCCUUAUCAGGGCCACCAA 30 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17488,sp|J01178.1|PMHISP03 Psammechinus miliaris early histone H2B gene, complete cds, and partial 5' spacer. ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCAGGGCCACCAA hit 255 : 823 848 (fwd) 39.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUUCAG:GCCACCAA 823 ACAACGGCCCUUUUCAGGGCCACCAA 848 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17490,sp|J01182.1|PMHISP05 Psammechinus miliaris histone H2A gene, complete cds. ----isReversed: 0 ----hitSequence: ACAACGGCCCUUAUCAGGGCCACCAA hit 256 : 729 754 (fwd) 37.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUU UCAG:GCCACCAA 729 ACAACGGCCCUUAUCAGGGCCACCAA 754 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17492,sp|J01184.1|PMHISP07 Psammechinus miliaris histone H1 gene, partial cds. ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCAC hit 257 : 102 127 (fwd) 38.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCA 102 ACAACGGCUCUUUUCAGAGCCACCAC 127 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17640,sp|X05620.1|POH2BG3 Sea star histone H2B gene 3'region ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCAACAC hit 258 : 58 83 (fwd) 35.63 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCA CA 58 CAAACGGCUCUUUUCAGAGCCAACAC 83 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17642,sp|X54113.1|POH4H3 P.ochraceus histone genes H4 and H3 ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCAC hit 259 : 989 1014 (fwd) 38.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACCA 989 ACAACGGCUCUUUUCAGAGCCACCAC 1014 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #17642,sp|X54113.1|POH4H3 P.ochraceus histone genes H4 and H3 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAC hit 260 : 2211 2236 (fwd) 38.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCA 2211 AAAACGGCUCUUUUCAGAGCCACCAC 2236 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19394,sp|S49118.1|S49118 histone H1 [Tigriopus californicus, Genomic, 1680 nt]. ----isReversed: 0 ----hitSequence: ACCCCGGCUCUUUUCAGAGCCAAAAC hit 261 : 1081 1106 (fwd) 28.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC +GGCUCUUUUCAGAGCCA A 1081 ACCCCGGCUCUUUUCAGAGCCAAAAC 1106 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19395,sp|S49144.1|S49144 histone H2B-1, histone H2A [Tigriopus californicus, Genomic, 2280 nt]. ----isReversed: 0 ----hitSequence: CGAAAGGCCCUUUUCAGGGCCAACAA hit 262 : 2148 2173 (fwd) 31.60 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUUCAG:GCCA CAA 2148 CGAAAGGCCCUUUUCAGGGCCAACAA 2173 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19395,sp|S49144.1|S49144 histone H2B-1, histone H2A [Tigriopus californicus, Genomic, 2280 nt]. ----isReversed: 1 ----hitSequence: CAAAAGGCCUUUAUCAAGGCCAAAAC hit 263 : 154 129 (rev) 25.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC::UU UCA::GCCA A 2127 CAAAAGGCCUUUAUCAAGGCCAAAAC 2152 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19580,sp|S64499.2|S64499 Styela plicata H3 histone and H4 histone genes, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAA hit 264 : 1145 1170 (fwd) 40.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCAA 1145 AAAACGGCUCUUUUCAGAGCCACCAA 1170 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19580,sp|S64499.2|S64499 Styela plicata H3 histone and H4 histone genes, complete cds. ----isReversed: 1 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCCA hit 265 : 159 134 (rev) 39.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACC+A 1062 CAAACGGCUCUUUUCAGAGCCACCCA 1087 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19660,sp|S67324.1|S67324 histone gene cluster: histone H3...histone H4 [Acropora formosa=coral, sperms, Genomic, 4 genes, 3764 nt]. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCACCAAU hit 266 : 431 456 (fwd) 26.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+ GCUCUUUU AGAGC C A 431 AAAACGGCUCUUUUAAGAGCACCAAU 456 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19660,sp|S67324.1|S67324 histone gene cluster: histone H3...histone H4 [Acropora formosa=coral, sperms, Genomic, 4 genes, 3764 nt]. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUGUAGGAGCCACCAC hit 267 : 2585 2610 (fwd) 25.53 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUC U U GAGCCACCA 2585 AAAACGGCUCUUGUAGGAGCCACCAC 2610 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19660,sp|S67324.1|S67324 histone gene cluster: histone H3...histone H4 [Acropora formosa=coral, sperms, Genomic, 4 genes, 3764 nt]. ----isReversed: 1 ----hitSequence: AAAACGGCUCUUAUAGGAGCCAACAA hit 268 : 3159 3134 (rev) 27.07 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUC U U GAGCCA CAA 606 AAAACGGCUCUUAUAGGAGCCAACAA 631 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #19660,sp|S67324.1|S67324 histone gene cluster: histone H3...histone H4 [Acropora formosa=coral, sperms, Genomic, 4 genes, 3764 nt]. ----isReversed: 1 ----hitSequence: ACAACGGCUCUUUUAGGAGCCAACAC hit 269 : 1432 1407 (rev) 28.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUC UUU GAGCCA CA 2333 ACAACGGCUCUUUUAGGAGCCAACAC 2358 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21241,sp|M20314.1|SPH1BL S.purpuratus late histone H1-beta gene, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUAUCAGAGCCACCCA hit 270 : 1522 1547 (fwd) 36.60 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUU UCAGAGCCACC+A 1522 CAAACGGCUCUUAUCAGAGCCACCCA 1547 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21245,sp|X00151.1|SPH2B03 Sea urchin transposon TU1 fragment from H2B pseudogene ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUCUGGGCCACAAA hit 271 : 385 410 (fwd) 32.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:C UUUC G:GCCAC AA 385 ACAACGGCCCUUUUCUGGGCCACAAA 410 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21246,sp|X04681.1|SPH2B1G S. purpuratus gene for sperm specific histone subtype H2B-1 ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCAA hit 272 : 812 837 (fwd) 40.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACCAA 812 CCAACGGCUCUUUUCAGAGCCACCAA 837 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21247,sp|X06642.1|SPH2BAL3 Strongylocentrotus purpuratus late histone genes L3 H2b - H2a ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUAAGAGCCACCAA hit 273 : 1573 1598 (fwd) 38.94 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUU AGAGCCACCAA 1573 ACAACGGCUCUUUUAAGAGCCACCAA 1598 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21247,sp|X06642.1|SPH2BAL3 Strongylocentrotus purpuratus late histone genes L3 H2b - H2a ----isReversed: 1 ----hitSequence: CAAACGGUCCUUAUAAGGACCACCAA hit 274 : 248 223 (rev) 32.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GG::CUU U AG::CCACCAA 1733 CAAACGGUCCUUAUAAGGACCACCAA 1758 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21250,sp|M32426.1|SPH4AA S.purpuratus H4 histone mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCNCCAA hit 275 : 541 566 (fwd) 36.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCC CCAA 541 CAAACGGCUCUUUUCAGAGCCNCCAA 566 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21251,sp|X06639.1|SPH4L1 Strongylocentrotus purpuratus late histone gene L1 H4 ----isReversed: 0 ----hitSequence: AAACCGGCUCUUUUAAGAGCCACCAA hit 276 : 536 561 (fwd) 35.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A +GGCUCUUUU AGAGCCACCAA 536 AAACCGGCUCUUUUAAGAGCCACCAA 561 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21252,sp|X06641.1|SPH4L2 Strongylocentrotus purpuratus late histone gene L2 H4 ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUUAGAGCCACCAA hit 277 : 594 619 (fwd) 38.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUU AGAGCCACCAA 594 ACAACGGCUCUUUUUAGAGCCACCAA 619 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21254,sp|V01354.1|SPHI01 Sea urchin gene encoding histone H1 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCAC hit 278 : 756 781 (fwd) 38.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACCA 756 AAAACGGCUCUUUUCAGAGCCACCAC 781 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21255,sp|V01355.1|SPHIH4 Sea urchin gene for histone H4. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAA hit 279 : 567 592 (fwd) 40.10 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCAA 567 CAAACGGCUCUUUUCAGAGCCACCAA 592 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21256,sp|V01356.1|SPHIS1 Sea urchin genes for the histones H2B and H3. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAC hit 280 : 1845 1870 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCA 1845 CAAACGGCUCUUUUCAGAGCCACCAC 1870 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21259,sp|V01357.1|SPHIS2 Sea urchin (S. purpuratus) gene for histone H2A ----isReversed: 0 ----hitSequence: UCAACGGCCCUUAUCAGGGCCACCAA hit 281 : 479 504 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAA+GGC:CUU UCAG:GCCACCAA 479 UCAACGGCCCUUAUCAGGGCCACCAA 504 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21262,sp|M16033.1|SPHISH1G Sea urchin (S.purpuratus) late histone H1-gamma gene, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUAUCAGAGCCACCCA hit 282 : 1139 1164 (fwd) 36.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUU UCAGAGCCACC+A 1139 CCAACGGCUCUUAUCAGAGCCACCCA 1164 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21264,sp|X03952.1|SPHISH34 Sea urchin (S. purpuratus) late embryonic H3 and H4 histone genes ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUUAGAGCCACCAC hit 283 : 2442 2467 (fwd) 36.61 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACCA 2442 CCAACGGCUCUUUUUAGAGCCACCAC 2467 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21264,sp|X03952.1|SPHISH34 Sea urchin (S. purpuratus) late embryonic H3 and H4 histone genes ----isReversed: 1 ----hitSequence: CAAACGGCUCUUUUUAGAGCCACCAA hit 284 : 649 624 (rev) 37.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUU AGAGCCACCAA 1858 CAAACGGCUCUUUUUAGAGCCACCAA 1883 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #21539,sp|X54115.1|SSH4H3 S.stimpsoni histone genes H4 and H3 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCAC hit 285 : 492 517 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACCA 492 CAAACGGCUCUUUUCAGAGCCACCAC 517 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22857,sp|M84797.1|TCH1234A Tigriopus californicus histone H1 gene, complete cds; histone H3 gene, complete cds; histone H4 gene, complete cds; histone H2B ----isReversed: 0 ----hitSequence: ACCCCGGCUCUUUUCAGAGCCAAAAC hit 286 : 1081 1106 (fwd) 28.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC +GGCUCUUUUCAGAGCCA A 1081 ACCCCGGCUCUUUUCAGAGCCAAAAC 1106 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22857,sp|M84797.1|TCH1234A Tigriopus californicus histone H1 gene, complete cds; histone H3 gene, complete cds; histone H4 gene, complete cds; histone H2B ----isReversed: 0 ----hitSequence: CAUUCGGCCCUUUUCAGGGCCACCAA hit 287 : 3199 3224 (fwd) 27.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++ +GGC:CUUUUCAG:GCCACCAA 3199 CAUUCGGCCCUUUUCAGGGCCACCAA 3224 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22857,sp|M84797.1|TCH1234A Tigriopus californicus histone H1 gene, complete cds; histone H3 gene, complete cds; histone H4 gene, complete cds; histone H2B ----isReversed: 0 ----hitSequence: CGAAAGGCCCUUUUCAGGGCCAACAA hit 288 : 6708 6733 (fwd) 31.60 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUUCAG:GCCA CAA 6708 CGAAAGGCCCUUUUCAGGGCCAACAA 6733 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22857,sp|M84797.1|TCH1234A Tigriopus californicus histone H1 gene, complete cds; histone H3 gene, complete cds; histone H4 gene, complete cds; histone H2B ----isReversed: 1 ----hitSequence: CAAAAGGCCUUUAUCAAGGCCAAAAC hit 289 : 4714 4689 (rev) 25.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC::UU UCA::GCCA A 2718 CAAAAGGCCUUUAUCAAGGCCAAAAC 2743 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22857,sp|M84797.1|TCH1234A Tigriopus californicus histone H1 gene, complete cds; histone H3 gene, complete cds; histone H4 gene, complete cds; histone H2B ----isReversed: 1 ----hitSequence: CCAACGGCCUUUUUAAAGGCCAACAC hit 290 : 1943 1918 (rev) 27.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC::UUUU A::GCCA CA 5489 CCAACGGCCUUUUUAAAGGCCAACAC 5514 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22868,sp|M84799.1|TCH2B3A Tigriopus californicus histone H2B-3 gene, complete cds. ----isReversed: 0 ----hitSequence: AUAAAGGCCUUUUUCAAGGCCAACAA hit 291 : 590 615 (fwd) 25.65 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAAGGC::UUUUCA::GCCA CAA 590 AUAAAGGCCUUUUUCAAGGCCAACAA 615 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22869,sp|X52393.1|TCH3H4 Tigriopus californicus DNA for histone H3 and histone H4 ----isReversed: 0 ----hitSequence: CAUUCGGCCCUUUUCAGGGCCACCAA hit 292 : 1490 1515 (fwd) 27.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++ +GGC:CUUUUCAG:GCCACCAA 1490 CAUUCGGCCCUUUUCAGGGCCACCAA 1515 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #22869,sp|X52393.1|TCH3H4 Tigriopus californicus DNA for histone H3 and histone H4 ----isReversed: 1 ----hitSequence: CCAACGGCCUUUUUAAAGGCCAACAC hit 293 : 234 209 (rev) 27.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC::UUUU A::GCCA CA 1327 CCAACGGCCUUUUUAAAGGCCAACAC 1352 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #25764,sp|U89799.1|U89799 Anopheles gambiae transposon Topi I, Tc1-like transposase gene, complete cds. ----isReversed: 0 ----hitSequence: UAAACAGUCCUUUUCAGGGCUACCAA hit 294 : 2033 2058 (fwd) 27.63 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+:G::CUUUUCAG::C:ACCAA 2033 UAAACAGUCCUUUUCAGGGCUACCAA 2058 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26289,sp|U96764.1|U96764 Chaetopterus variopedatus histone H1, histone H2B, histone H3, histone H4 and histone H2A genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGUCCUUAUCAGGACCAUCCA hit 295 : 705 730 (fwd) 27.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG::CUU UCAG::CCA C+A 705 CCAAAGGUCCUUAUCAGGACCAUCCA 730 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26289,sp|U96764.1|U96764 Chaetopterus variopedatus histone H1, histone H2B, histone H3, histone H4 and histone H2A genes, complete cds. ----isReversed: 1 ----hitSequence: CAAACGGUCCUUUUUAGGACCAAACA hit 296 : 2933 2908 (rev) 29.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GG::CUUUU AG::CCA +A 515 CAAACGGUCCUUUUUAGGACCAAACA 540 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26354,sp|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones ----isReversed: 0 ----hitSequence: CACACGGCUCUUUUUAGAGCCACAUA hit 297 : 787 812 (fwd) 31.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++ A+GGCUCUUUU AGAGCCAC A 787 CACACGGCUCUUUUUAGAGCCACAUA 812 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26354,sp|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones ----isReversed: 0 ----hitSequence: CCAAUGGCUCUUUUCAGAGCCCCCAC hit 298 : 3342 3367 (fwd) 31.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA GGCUCUUUUCAGAGCC CCA 3342 CCAAUGGCUCUUUUCAGAGCCCCCAC 3367 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26354,sp|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones ----isReversed: 1 ----hitSequence: ACAAUGGCUCUUUUCAGAGCCCCACU hit 299 : 4203 4178 (rev) 28.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA GGCUCUUUUCAGAGCC C + 740 ACAAUGGCUCUUUUCAGAGCCCCACU 765 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/inv03.dat.fasta.gz ----sequence: #26354,sp|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones ----isReversed: 1 ----hitSequence: CUAAAGGCACUUUUAAGUGCCACCAC hit 300 : 2272 2247 (rev) 27.04 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC CUUUU AG GCCACCA 2671 CUAAAGGCACUUUUAAGUGCCACCAC 2696 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #7435,sp|AF001288.1|AF001288 Bos taurus histone H4.1 mRNA, complete cds. ----isReversed: 0 ----hitSequence: UUAAAGGCCCUUUUCAGGGCCGCCCA hit 301 : 375 400 (fwd) 26.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGC:CUUUUCAG:GCC CC+A 375 UUAAAGGCCCUUUUCAGGGCCGCCCA 400 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mam.dat.fasta.gz ----sequence: #42518,sp|M97756.1|MMHISH1T Macaca mulatta histone H1t gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 302 : 813 838 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 813 CCAAAGGCUCUUUUAAGAGCCACCCA 838 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #4893,sp|AC087229.27|AC087229 Mus musculus chromosome 1 clone rp23-191a19 strain C57BL/6J, complete sequence. ----isReversed: 0 ----hitSequence: ACAAAUGCUCUUUUAAGAGCAAGCAA hit 303 : 102805 102830 (fwd) 27.10 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAA:GCUCUUUU AGAGC:A CAA 102805 ACAAAUGCUCUUUUAAGAGCAAGCAA 102830 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #5602,sp|AC117188.3|AC117188 Mus musculus clone RP23-42E3, complete sequence. ----isReversed: 1 ----hitSequence: AAAAAGACUUUUUUAAAAGUCACAAA hit 304 : 22693 22668 (rev) 25.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAG:CU:UUUU A:AG:CAC AA 203751 AAAAAGACUUUUUUAAAAGUCACAAA 203776 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6175,sp|AC122428.4|AC122428 Mus musculus chromosome 9 clone RP24-175C20, complete sequence. ----isReversed: 1 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 305 : 149540 149515 (rev) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 36363 ACAAAGGCCCUUUUAAGGGCCACCAC 36388 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #6251,sp|AC122804.4|AC122804 Mus musculus chromosome 6 clone RP23-296J10, complete sequence. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUCAGGGCCCACAA hit 306 : 113265 113290 (fwd) 34.45 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUUCAG:GCC CAA 113265 ACAAAGGCCCUUUUCAGGGCCCACAA 113290 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #7065,sp|AC126935.3|AC126935 Mus musculus chromosome 1 clone RP24-186K24, complete sequence. ----isReversed: 0 ----hitSequence: AAAAAGACUUUUUUAAAAGUCACAAA hit 307 : 52693 52718 (fwd) 25.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAG:CU:UUUU A:AG:CAC AA 52693 AAAAAGACUUUUUUAAAAGUCACAAA 52718 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 308 : 137824 137849 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 137824 CCAAAGGCUCUUUUCAGAGCCACUCA 137849 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 309 : 139080 139105 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 139080 UCAAAGGCUCUUUUCAGAGCCACCCA 139105 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUAA hit 310 : 143491 143516 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC AA 143491 ACAAAGGCUCUUUUCAGAGCCACUAA 143516 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: CUAAAGGUCCUUUUCAGGACCACCAC hit 311 : 156422 156447 (fwd) 30.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGG::CUUUUCAG::CCACCA 156422 CUAAAGGUCCUUUUCAGGACCACCAC 156447 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 312 : 175518 175543 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 175518 CCAAAGGCUCUUUUCAGAGCCACCCA 175543 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUUAGAGCCACUCA hit 313 : 175609 175634 (fwd) 35.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCCAC +A 175609 ACAAAGGCUCUUUUUAGAGCCACUCA 175634 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 314 : 208908 208933 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 208908 ACAAAGGCUCUUUUCAGAGCCACCCA 208933 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCUAACAC hit 315 : 207788 207763 (rev) 29.92 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAA GCUCUUUUCAGAGC A CA 15036 ACAAAGGCUCUUUUCAGAGCUAACAC 15061 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCCUC hit 316 : 203930 203905 (rev) 33.65 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC CC 18894 CAAAAGGCUCUUUUCAGAGCCCCCUC 18919 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 317 : 200847 200822 (rev) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 21977 CCAAAGGCUCUUUUCAGAGCCACCUA 22002 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 318 : 174392 174367 (rev) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 48432 CCAAAGGCUCUUUUCAGAGCCACCUA 48457 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 319 : 171160 171135 (rev) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 51664 CAAAAGGCCCUUUUCAGGGCCACCCA 51689 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23855,sp|AL589651.8|AL589651 Mouse DNA sequence from clone RP23-138F20 on chromosome 13 ----isReversed: 1 ----hitSequence: UCAAAGGCUCUUUUAAGAGCCACCCA hit 320 : 136728 136703 (rev) 36.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUU AGAGCCACC+A 86096 UCAAAGGCUCUUUUAAGAGCCACCCA 86121 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCAUCCA hit 321 : 11060 11085 (fwd) 33.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCA C+A 11060 AAAAAGGCUCUUUUCAGAGCCAUCCA 11085 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 0 ----hitSequence: CUAAAGGCCCUUUUCAGGGCCAUCCA hit 322 : 12291 12316 (fwd) 27.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUUCAG:GCCA C+A 12291 CUAAAGGCCCUUUUCAGGGCCAUCCA 12316 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 323 : 34343 34368 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 34343 CCAAAGGCUCUUUUCAGAGCCACCUA 34368 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCAUCCA hit 324 : 33216 33191 (rev) 33.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCA C+A 149602 AAAAAGGCUCUUUUCAGAGCCAUCCA 149627 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 1 ----hitSequence: CUAAAGGCCCUUUUCAGGGCCAUCCA hit 325 : 31985 31960 (rev) 27.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUUCAG:GCCA C+A 150833 CUAAAGGCCCUUUUCAGGGCCAUCCA 150858 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23880,sp|AL589879.21|AL589879 Mouse DNA sequence from clone RP23-38E20 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 326 : 9933 9908 (rev) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 172885 CCAAAGGCUCUUUUCAGAGCCACCUA 172910 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 327 : 126468 126493 (fwd) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 126468 CCAAAGGCUCUUUUCAGAGCCACACA 126493 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUCUCAGGGCCGCCCA hit 328 : 127558 127583 (fwd) 29.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUU UCAG:GCC CC+A 127558 CCAAAGGCCCUUCUCAGGGCCGCCCA 127583 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCUA hit 329 : 143311 143336 (fwd) 36.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACC A 143311 AAAAAGGCUCUUUUAAGAGCCACCUA 143336 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 330 : 148871 148846 (rev) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 37192 CAAAAGGCUCUUUUCAGAGCCACCAC 37217 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 331 : 141180 141155 (rev) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 44883 CCAAAGGCUCUUUUAAGAGCCACCCA 44908 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 332 : 136811 136786 (rev) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 49252 ACAAAGGCUCUUUUCAGAGCCACCCA 49277 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 333 : 135563 135538 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 50500 CCAAAGGCUCUUUUCAGAGCCACCCA 50525 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: CAAAAGGUCCUUUUCAGGACCACUCA hit 334 : 131017 130992 (rev) 34.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGG::CUUUUCAG::CCAC +A 55046 CAAAAGGUCCUUUUCAGGACCACUCA 55071 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23884,sp|AL590388.4|AL590388 Mouse DNA sequence from clone RP23-480B19 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCAA hit 335 : 123991 123966 (rev) 40.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACCAA 62072 CCAACGGCUCUUUUCAGAGCCACCAA 62097 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23895,sp|AL590614.8|AL590614 Mouse DNA sequence from clone RP23-9O16 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUAA hit 336 : 53651 53676 (fwd) 37.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC AA 53651 CCAAAGGCUCUUUUAAGAGCCACUAA 53676 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23895,sp|AL590614.8|AL590614 Mouse DNA sequence from clone RP23-9O16 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACGCA hit 337 : 60989 61014 (fwd) 34.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 60989 CCAAAGGCUCUUUUCAGAGCCACGCA 61014 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23895,sp|AL590614.8|AL590614 Mouse DNA sequence from clone RP23-9O16 on chromosome 13 ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 338 : 59859 59834 (rev) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 150987 ACAAAGGCUCUUUUCAGAGCCACCUA 151012 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23895,sp|AL590614.8|AL590614 Mouse DNA sequence from clone RP23-9O16 on chromosome 13 ----isReversed: 1 ----hitSequence: UUAAAGGCCCUUUUUAGGGCCACCAC hit 339 : 58342 58317 (rev) 29.38 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGC:CUUUU AG:GCCACCA 152504 UUAAAGGCCCUUUUUAGGGCCACCAC 152529 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #23895,sp|AL590614.8|AL590614 Mouse DNA sequence from clone RP23-9O16 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 340 : 52503 52478 (rev) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 158343 CCAAAGGCUCUUUUCAGAGCCACACA 158368 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 341 : 12055 12080 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 12055 CCAAAGGCCCUUUUCAGGGCCGCCCA 12080 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAC hit 342 : 14956 14981 (fwd) 38.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 14956 CCAAAGGCUCUUUUCAGAGCCACCAC 14981 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: UUAAAGGCUCUUCUUAGAGCCACCCA hit 343 : 16486 16511 (fwd) 27.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGCUCUU U AGAGCCACC+A 16486 UUAAAGGCUCUUCUUAGAGCCACCCA 16511 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 344 : 25529 25554 (fwd) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 25529 AAAACGGCUCUUUUAAGAGCCACCUC 25554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGGGCUACACA hit 345 : 27582 27607 (fwd) 27.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAA GC CUUUUCAG GC AC +A 27582 CAAAAGGCUCUUUUCAGGGCUACACA 27607 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCCA hit 346 : 36388 36413 (fwd) 39.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACC+A 36388 CAAACGGCUCUUUUCAGAGCCACCCA 36413 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 347 : 52444 52469 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 52444 CCAAAGGCUCUUUUCAGAGCCACCCA 52469 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUCCA hit 348 : 55496 55521 (fwd) 33.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA C+A 55496 ACAAAGGCUCUUUUCAGAGCCAUCCA 55521 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCC hit 349 : 56845 56870 (fwd) 38.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+ 56845 CCAAAGGCUCUUUUCAGAGCCACCCC 56870 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCACUAC hit 350 : 62360 62385 (fwd) 36.47 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCCAC A 62360 CCAAAGGCCCUUUUCAGGGCCACUAC 62385 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 351 : 165057 165082 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 165057 CCAAAGGCUCUUUUCAGAGCCACCCA 165082 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 352 : 176935 176960 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 176935 CCAAAGGCUCUUUUAAGAGCCACUUA 176960 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 353 : 178524 178499 (rev) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 6207 CAAAAGGCCCUUUUCAGGGCCACCCA 6232 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCAC hit 354 : 163912 163887 (rev) 36.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CCA 20819 CCAAAGGCUCUUUUCAGAGCCCCCAC 20844 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 355 : 102217 102192 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 82514 CCAAAGGCUCUUUUCAGAGCCACCCA 82539 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 356 : 65966 65941 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 118765 CCAAAGGCUCUUUUCAGAGCCACCCA 118790 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 357 : 54391 54366 (rev) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 130340 CCAAAGGCUCUUUUCAGAGCCACCUA 130365 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUUCA hit 358 : 51294 51269 (rev) 31.93 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA +A 133437 ACAAAGGCUCUUUUCAGAGCCAUUCA 133462 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 359 : 42529 42504 (rev) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 142202 AAAACGGCUCUUUUAAGAGCCACCUC 142227 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCACCCA hit 360 : 31917 31892 (rev) 37.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCCACC+A 152814 UCAAAGGCCCUUUUCAGGGCCACCCA 152839 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24009,sp|AL592149.8|AL592149 Mouse DNA sequence from clone RP23-283N14 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 361 : 23550 23525 (rev) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 161181 CCAAAGGCUCUUUUCAGAGCCACUCA 161206 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24156,sp|AL606464.11|AL606464 Mouse DNA sequence from clone RP23-462P2 on chromosome 13 ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCUU hit 362 : 53811 53836 (fwd) 35.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC 53811 AAAAAGGCUCUUUUCAGAGCCACCUU 53836 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24156,sp|AL606464.11|AL606464 Mouse DNA sequence from clone RP23-462P2 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 363 : 52675 52650 (rev) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 131024 CCAAAGGCUCUUUUAAGAGCCACCCA 131049 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24475,sp|AL645563.12|AL645563 Mouse DNA sequence from clone RP23-132L14 on chromosome 4 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACGCC hit 364 : 140780 140755 (rev) 32.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC + 73677 CCAAAGGCUCUUUUCAGAGCCACGCC 73702 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24689,sp|AL662809.14|AL662809 Mouse DNA sequence from clone RP23-441I8 on chromosome 11 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUU hit 365 : 33816 33841 (fwd) 35.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 33816 CCAAAGGCUCUUUUCAGAGCCACCUU 33841 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24689,sp|AL662809.14|AL662809 Mouse DNA sequence from clone RP23-441I8 on chromosome 11 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 366 : 39639 39664 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 39639 CCAAAGGCUCUUUUCAGAGCCACCCA 39664 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24689,sp|AL662809.14|AL662809 Mouse DNA sequence from clone RP23-441I8 on chromosome 11 ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCCA hit 367 : 46720 46745 (fwd) 39.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACC+A 46720 CCAACGGCUCUUUUCAGAGCCACCCA 46745 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #24689,sp|AL662809.14|AL662809 Mouse DNA sequence from clone RP23-441I8 on chromosome 11 ----isReversed: 1 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 368 : 38496 38471 (rev) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 64634 UCAAAGGCUCUUUUCAGAGCCACCCA 64659 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25150,sp|AL672008.8|AL672008 Mouse DNA sequence from clone RP23-389M3 on chromosome X ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAC hit 369 : 92722 92747 (fwd) 38.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 92722 CCAAAGGCUCUUUUCAGAGCCACCAC 92747 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25150,sp|AL672008.8|AL672008 Mouse DNA sequence from clone RP23-389M3 on chromosome X ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCAC hit 370 : 92818 92843 (fwd) 37.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 92818 UCAAAGGCUCUUUUCAGAGCCACCAC 92843 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25150,sp|AL672008.8|AL672008 Mouse DNA sequence from clone RP23-389M3 on chromosome X ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAGAGCCACCAC hit 371 : 92914 92938 (fwd) 30.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 92914 CCAAAGGCUCUUUU-AGAGCCACCAC 92938 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #25744,sp|AL732464.19|AL732464 Mouse DNA sequence from clone RP23-453F10 on chromosome 4 ----isReversed: 0 ----hitSequence: ACCCAGGCCCUUUACAGGGCCACACA hit 372 : 92118 92143 (fwd) 25.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AGGC:CUUU CAG:GCCAC +A 92118 ACCCAGGCCCUUUACAGGGCCACACA 92143 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #27388,sp|AL935060.17|AL935060 Mouse DNA sequence from clone RP24-151H6 on chromosome 2 ----isReversed: 1 ----hitSequence: UCACAGGCUCUUAUCAGAGCCCCCAG hit 373 : 173958 173933 (rev) 24.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CA AGGCUCUU UCAGAGCC CCA 38050 UCACAGGCUCUUAUCAGAGCCCCCAG 38075 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #27570,sp|AP003158.1|AP003158 Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences. ----isReversed: 1 ----hitSequence: CAAAGGGUUCUUUUCAGAUCCACCCU hit 374 : 72689 72664 (rev) 26.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA GG:UCUUUUCAGA:CCACC+ 121572 CAAAGGGUUCUUUUCAGAUCCACCCU 121597 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30657,sp|AY158903.1|AY158903 Mus musculus histone protein Hist1h1a gene, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCAA hit 375 : 1168 1193 (fwd) 40.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACCAA 1168 CCAACGGCUCUUUUCAGAGCCACCAA 1193 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30658,sp|AY158904.1|AY158904 Mus musculus histone protein Hist1h1b gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 376 : 1195 1220 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 1195 CCAAAGGCUCUUUUCAGAGCCACCUA 1220 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30659,sp|AY158905.1|AY158905 Mus musculus histone protein Hist1h1c gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 377 : 1201 1226 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 1201 CAAAAGGCUCUUUUCAGAGCCACCAC 1226 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30660,sp|AY158906.1|AY158906 Mus musculus histone protein Hist1h1d gene, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCCA hit 378 : 1190 1215 (fwd) 39.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACC+A 1190 CAAACGGCUCUUUUCAGAGCCACCCA 1215 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30661,sp|AY158907.1|AY158907 Mus musculus histone protein Hist1h1e gene, complete cds. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 379 : 473 448 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 909 CCAAAGGCUCUUUUCAGAGCCACCCA 934 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30662,sp|AY158908.1|AY158908 Mus musculus histone protein Hist1h1t gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 380 : 1210 1235 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 1210 CCAAAGGCUCUUUUAAGAGCCACUUA 1235 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30663,sp|AY158909.1|AY158909 Mus musculus histone protein Hist1h2ai gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 381 : 910 935 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 910 CCAAAGGCUCUUUUCAGAGCCACUCA 935 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30665,sp|AY158911.1|AY158911 Mus musculus histone protein Hist1h2ak gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 382 : 960 985 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 960 CCAAAGGCUCUUUUCAGAGCCACCUA 985 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30666,sp|AY158912.1|AY158912 Mus musculus histone protein Hist1h2an gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCUAACAC hit 383 : 921 946 (fwd) 29.92 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAA GCUCUUUUCAGAGC A CA 921 ACAAAGGCUCUUUUCAGAGCUAACAC 946 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30667,sp|AY158913.1|AY158913 Mus musculus histone protein Hist1h2ao gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCAUCCA hit 384 : 927 952 (fwd) 33.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCA C+A 927 AAAAAGGCUCUUUUCAGAGCCAUCCA 952 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30668,sp|AY158914.1|AY158914 Mus musculus histone protein Hist1h2ah gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 385 : 903 928 (fwd) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 903 CCAAAGGCUCUUUUCAGAGCCACACA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30669,sp|AY158915.1|AY158915 Mus musculus histone protein Hist1h2ag gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 386 : 924 949 (fwd) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 924 ACAAAGGCUCUUUUCAGAGCCACCUA 949 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30670,sp|AY158916.1|AY158916 Mus musculus histone protein Hist1h2af gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAC hit 387 : 968 993 (fwd) 38.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 968 CCAAAGGCUCUUUUCAGAGCCACCAC 993 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30671,sp|AY158917.1|AY158917 Mus musculus histone protein Hist1h2ae gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUUCA hit 388 : 921 946 (fwd) 31.93 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA +A 921 ACAAAGGCUCUUUUCAGAGCCAUUCA 946 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30672,sp|AY158918.1|AY158918 Mus musculus histone protein Hist1h2ad gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUCCA hit 389 : 920 945 (fwd) 33.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA C+A 920 ACAAAGGCUCUUUUCAGAGCCAUCCA 945 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30673,sp|AY158919.1|AY158919 Mus musculus histone protein Hist1h2ac gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCAC hit 390 : 921 946 (fwd) 36.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CCA 921 CCAAAGGCUCUUUUCAGAGCCCCCAC 946 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30674,sp|AY158920.1|AY158920 Mus musculus histone protein Hist1h2ab gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 391 : 935 960 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 935 ACAAAGGCUCUUUUCAGAGCCACCCA 960 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30675,sp|AY158921.1|AY158921 Mus musculus histone protein Hist1h2aa gene, complete cds. ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCUU hit 392 : 243 218 (rev) 35.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC 959 AAAAAGGCUCUUUUCAGAGCCACCUU 984 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30676,sp|AY158922.1|AY158922 Mus musculus histone protein Hist2h2ab gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUUAGAGCCACCAA hit 393 : 375 400 (fwd) 38.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 375 AAAAAGGCUCUUUUUAGAGCCACCAA 400 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30676,sp|AY158922.1|AY158922 Mus musculus histone protein Hist2h2ab gene, complete cds. ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCAA hit 394 : 485 460 (rev) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 956 AAAAAGGCUCUUUUAAGAGCCACCAA 981 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30677,sp|AY158923.1|AY158923 Mus musculus histone protein Hist2h2ac gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUUAGAGCCACCAA hit 395 : 715 740 (fwd) 38.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 715 AAAAAGGCUCUUUUUAGAGCCACCAA 740 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30677,sp|AY158923.1|AY158923 Mus musculus histone protein Hist2h2ac gene, complete cds. ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCAA hit 396 : 825 800 (rev) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 376 AAAAAGGCUCUUUUAAGAGCCACCAA 401 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30678,sp|AY158924.1|AY158924 Mus musculus histone protein Hist2h2aa2 gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 397 : 944 969 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 944 AAAAAGGCUCUUUUCAGAGCCACCCA 969 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30679,sp|AY158925.1|AY158925 Mus musculus histone protein Hist2h2aa1 gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 398 : 944 969 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 944 AAAAAGGCUCUUUUCAGAGCCACCCA 969 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30680,sp|AY158926.1|AY158926 Mus musculus histone protein Hist3h2a gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 399 : 964 989 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 964 CCAAAGGCUCUUUUCAGAGCCACCCA 989 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30681,sp|AY158927.1|AY158927 Mus musculus histone protein Hist1h2bl gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUAAGAGCCACCCA hit 400 : 903 928 (fwd) 36.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUU AGAGCCACC+A 903 UCAAAGGCUCUUUUAAGAGCCACCCA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30682,sp|AY158928.1|AY158928 Mus musculus histone protein Hist1h2bm gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUAA hit 401 : 901 926 (fwd) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC AA 901 ACAAAGGCUCUUUUCAGAGCCACUAA 926 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30683,sp|AY158929.1|AY158929 Mus musculus histone protein Hist1h2bn gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 402 : 903 928 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 903 CCAAAGGCUCUUUUCAGAGCCACCCA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30683,sp|AY158929.1|AY158929 Mus musculus histone protein Hist1h2bn gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUUAGAGCCACUCA hit 403 : 994 1019 (fwd) 35.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCCAC +A 994 ACAAAGGCUCUUUUUAGAGCCACUCA 1019 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30684,sp|AY158930.1|AY158930 Mus musculus histone protein Hist1h2bp gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 404 : 887 912 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 887 ACAAAGGCUCUUUUCAGAGCCACCCA 912 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30685,sp|AY158931.1|AY158931 Mus musculus histone protein Hist1h2bk gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUAA hit 405 : 892 917 (fwd) 37.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC AA 892 CCAAAGGCUCUUUUAAGAGCCACUAA 917 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30686,sp|AY158932.1|AY158932 Mus musculus histone protein Hist1h2bj gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACGCA hit 406 : 901 926 (fwd) 34.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 901 CCAAAGGCUCUUUUCAGAGCCACGCA 926 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30687,sp|AY158933.1|AY158933 Mus musculus histone protein Hist1h2bh gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 407 : 828 853 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 828 CCAAAGGCUCUUUUCAGAGCCACUCA 853 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30688,sp|AY158934.1|AY158934 Mus musculus histone protein Hist1h2bg gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 408 : 903 928 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 903 CCAAAGGCUCUUUUCAGAGCCACCCA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30689,sp|AY158935.1|AY158935 Mus musculus histone protein Hist1h2bf gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 409 : 903 928 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 903 CCAAAGGCUCUUUUCAGAGCCACCUA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30690,sp|AY158936.1|AY158936 Mus musculus histone protein Hist1h2be gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 410 : 903 928 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 903 CCAAAGGCUCUUUUCAGAGCCACCCA 928 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30691,sp|AY158937.1|AY158937 Mus musculus histone protein Hist1h2bc gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 411 : 994 1019 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 994 CCAAAGGCUCUUUUCAGAGCCACCCA 1019 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30692,sp|AY158938.1|AY158938 Mus musculus histone protein Hist1h2bb gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 412 : 904 929 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 904 CCAAAGGCUCUUUUAAGAGCCACCCA 929 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30693,sp|AY158939.1|AY158939 Mus musculus histone protein Hist1h2ba gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 413 : 907 932 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 907 CCAAAGGCUCUUUUAAGAGCCACCCA 932 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30695,sp|AY158941.1|AY158941 Mus musculus histone protein Hist2h2bb gene, complete cds. ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 414 : 484 459 (rev) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 1017 ACAAAGGCUCUUUUCAGAGCCACCUA 1042 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30696,sp|AY158942.1|AY158942 Mus musculus histone protein Hist3h2ba gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUU hit 415 : 934 959 (fwd) 35.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 934 CCAAAGGCUCUUUUCAGAGCCACCUU 959 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30697,sp|AY158943.1|AY158943 Mus musculus histone protein Hist3h2bb gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 416 : 905 930 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 905 UCAAAGGCUCUUUUCAGAGCCACCCA 930 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30698,sp|AY158944.1|AY158944 Mus musculus histone protein Hist1h3h gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 417 : 932 957 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 932 UCAAAGGCUCUUUUCAGAGCCACCCA 957 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30699,sp|AY158945.1|AY158945 Mus musculus histone protein Hist1h3i gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCCUC hit 418 : 931 956 (fwd) 33.65 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC CC 931 CAAAAGGCUCUUUUCAGAGCCCCCUC 956 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30700,sp|AY158946.1|AY158946 Mus musculus histone protein Hist1h3g gene, complete cds. ----isReversed: 0 ----hitSequence: UUAAAGGCUCUUCUUAGAGCCACCCA hit 419 : 936 961 (fwd) 27.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGCUCUU U AGAGCCACC+A 936 UUAAAGGCUCUUCUUAGAGCCACCCA 961 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30701,sp|AY158947.1|AY158947 Mus musculus histone protein Hist1h3f gene, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCCACCU hit 420 : 963 988 (fwd) 30.28 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCC C+ 963 AAAACGGCUCUUUUAAGAGCCCACCU 988 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30702,sp|AY158948.1|AY158948 Mus musculus histone protein Hist1h3e gene, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 421 : 943 968 (fwd) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 943 AAAACGGCUCUUUUAAGAGCCACCUC 968 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30703,sp|AY158949.1|AY158949 Mus musculus histone protein Hist1h3d gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCC hit 422 : 977 1002 (fwd) 38.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+ 977 CCAAAGGCUCUUUUCAGAGCCACCCC 1002 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30704,sp|AY158950.1|AY158950 Mus musculus histone protein Hist1h3c gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCUA hit 423 : 931 956 (fwd) 36.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACC A 931 AAAAAGGCUCUUUUAAGAGCCACCUA 956 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30705,sp|AY158951.1|AY158951 Mus musculus histone protein Hist1h3b gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 424 : 936 961 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 936 CCAAAGGCUCUUUUCAGAGCCACCCA 961 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30706,sp|AY158952.1|AY158952 Mus musculus histone protein Hist1h3a gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 425 : 944 969 (fwd) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 944 CCAAAGGCUCUUUUCAGAGCCACACA 969 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30707,sp|AY158953.1|AY158953 Mus musculus histone protein Hist2h3c2 gene, complete cds. ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 426 : 337 312 (rev) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 1104 AAAAAGGCUCUUUUCAGAGCCACCCA 1129 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30708,sp|AY158954.1|AY158954 Mus musculus histone protein Hist2h3c1 gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 427 : 1123 1148 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 1123 ACAAAGGCUCUUUUCAGAGCCACCAC 1148 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30709,sp|AY158955.1|AY158955 Mus musculus histone protein Hist2h3b gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 428 : 937 962 (fwd) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 937 ACAAAGGCUCUUUUCAGAGCCACCUA 962 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30710,sp|AY158956.1|AY158956 Mus musculus histone protein Hist1h4j gene, complete cds. ----isReversed: 0 ----hitSequence: CUAAAGGUCCUUUUCAGGACCACCAC hit 429 : 871 896 (fwd) 30.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGG::CUUUUCAG::CCACCA 871 CUAAAGGUCCUUUUCAGGACCACCAC 896 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30711,sp|AY158957.1|AY158957 Mus musculus histone protein Hist1h4k gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 430 : 836 861 (fwd) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 836 CAAAAGGCCCUUUUCAGGGCCACCCA 861 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30712,sp|AY158958.1|AY158958 Mus musculus histone protein Hist1h4m gene, complete cds. ----isReversed: 0 ----hitSequence: CUAAAGGCCCUUUUCAGGGCCAUCCA hit 431 : 841 866 (fwd) 27.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUUCAG:GCCA C+A 841 CUAAAGGCCCUUUUCAGGGCCAUCCA 866 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30713,sp|AY158959.1|AY158959 Mus musculus histone protein Hist1h4i gene, complete cds. ----isReversed: 0 ----hitSequence: UUAAAGGCCCUUUUUAGGGCCACCAC hit 432 : 838 863 (fwd) 29.38 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGC:CUUUU AG:GCCACCA 838 UUAAAGGCCCUUUUUAGGGCCACCAC 863 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30714,sp|AY158960.1|AY158960 Mus musculus histone protein Hist1h4h gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 433 : 904 929 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 904 CCAAAGGCCCUUUUCAGGGCCGCCCA 929 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30715,sp|AY158961.1|AY158961 Mus musculus histone protein Hist1h4f gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCACCCA hit 434 : 833 858 (fwd) 37.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCCACC+A 833 UCAAAGGCCCUUUUCAGGGCCACCCA 858 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30716,sp|AY158962.1|AY158962 Mus musculus histone protein Hist1h4d gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCACUAC hit 435 : 844 869 (fwd) 36.47 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCCAC A 844 CCAAAGGCCCUUUUCAGGGCCACUAC 869 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30717,sp|AY158963.1|AY158963 Mus musculus histone protein Hist1h4c gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 436 : 841 866 (fwd) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 841 CAAAAGGCCCUUUUCAGGGCCACCCA 866 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30718,sp|AY158964.1|AY158964 Mus musculus histone protein Hist1h4b gene, complete cds. ----isReversed: 1 ----hitSequence: CAAAAGGUCCUUUUCAGGACCACUCA hit 437 : 469 444 (rev) 34.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGG::CUUUUCAG::CCAC +A 718 CAAAAGGUCCUUUUCAGGACCACUCA 743 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30719,sp|AY158965.1|AY158965 Mus musculus histone protein Hist1h4a gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUCUCAGGGCCGCCCA hit 438 : 775 800 (fwd) 29.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUU UCAG:GCC CC+A 775 CCAAAGGCCCUUCUCAGGGCCGCCCA 800 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30720,sp|AY158966.1|AY158966 Mus musculus histone protein Hist2h4 gene, complete cds. ----isReversed: 0 ----hitSequence: CUAACGGCCCUUUUUAGGGCCAACCA hit 439 : 846 871 (fwd) 28.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGC:CUUUU AG:GCCA C+A 846 CUAACGGCCCUUUUUAGGGCCAACCA 871 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #30721,sp|AY158967.1|AY158967 Mus musculus histone protein Hist4h4 gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUCAGGGCCCACAA hit 440 : 753 778 (fwd) 34.45 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUUCAG:GCC CAA 753 ACAAAGGCCCUUUUCAGGGCCCACAA 778 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #36492,sp|BC005468.1|BC005468 Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:6616 IMAGE:3490058), complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 441 : 515 540 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 515 ACAAAGGCCCUUUUAAGGGCCACCAC 540 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #37605,sp|BC010336.1|BC010336 Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:11561 IMAGE:3156946), complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 442 : 521 546 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 521 ACAAAGGCCCUUUUAAGGGCCACCAC 546 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #37655,sp|BC010564.1|BC010564 Mus musculus, similar to histone H2A, clone IMAGE:3582122, mRNA, partial cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 443 : 474 499 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 474 AAAAAGGCUCUUUUCAGAGCCACCCA 499 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #38495,sp|BC013561.1|BC013561 Mus musculus expressed sequence AW060654, mRNA (cDNA clone IMAGE:3492058), partial cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 444 : 3534 3559 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 3534 CAAAAGGCUCUUUUCAGAGCCACCAC 3559 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #38774,sp|BC015270.1|BC015270 Mus musculus histone 1, H3f, mRNA (cDNA clone MGC:18559 IMAGE:4240748), complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 445 : 623 648 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 623 ACAAAGGCUCUUUUCAGAGCCACCAC 648 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #43345,sp|BC028550.1|BC028550 Mus musculus, Similar to germinal histone H4 gene, clone IMAGE:1398106, mRNA, partial cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 446 : 351 376 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 351 CCAAAGGCCCUUUUCAGGGCCGCCCA 376 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #49330,sp|BC051921.1|BC051921 Mus musculus histone 3, H2ba, mRNA (cDNA clone MGC:62161 IMAGE:5684450), complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUU hit 447 : 425 450 (fwd) 35.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 425 CCAAAGGCUCUUUUCAGAGCCACCUU 450 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #49535,sp|BC052219.1|BC052219 Mus musculus histone 1, H4h, mRNA (cDNA clone IMAGE:30017176), partial cds. ----isReversed: 0 ----hitSequence: UUAAAGGCCCUUUUUAGGGCCACCAC hit 448 : 350 375 (fwd) 29.38 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGC:CUUUU AG:GCCACCA 350 UUAAAGGCCCUUUUUAGGGCCACCAC 375 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #51014,sp|BC055904.1|BC055904 Mus musculus histone 2, H3ca2, mRNA (cDNA clone IMAGE:4913108), partial cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUCCA hit 449 : 688 713 (fwd) 33.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA C+A 688 ACAAAGGCUCUUUUCAGAGCCAUCCA 713 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #51014,sp|BC055904.1|BC055904 Mus musculus histone 2, H3ca2, mRNA (cDNA clone IMAGE:4913108), partial cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCC hit 450 : 2037 2062 (fwd) 38.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+ 2037 CCAAAGGCUCUUUUCAGAGCCACCCC 2062 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #52043,sp|Z30940.1|MDH2AHIST M.domesticus (CD-1) mRNA for histone H2A (partial) ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 451 : 469 494 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 469 AAAAAGGCUCUUUUCAGAGCCACCCA 494 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #52044,sp|Z30939.1|MDH3HIST Mus domesticus partial mRNA for histone H3, CD-1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 452 : 204 229 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 204 CCAAAGGCUCUUUUCAGAGCCACCCA 229 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59994,sp|Z46227.1|MMH1A42 M.musculus gene for histone H1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 453 : 911 936 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 911 CCAAAGGCUCUUUUCAGAGCCACCUA 936 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #59998,sp|L26163.1|MMH1EH2B Mouse histone H1e gene, complete cds and histone H2b pseudogene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 454 : 2042 2067 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 2042 CCAAAGGCUCUUUUCAGAGCCACCCA 2067 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60000,sp|X72805.1|MMH1T M.musculus gene for testicular histone H1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 455 : 2718 2743 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 2718 CCAAAGGCUCUUUUAAGAGCCACUUA 2743 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60001,sp|L26164.1|MMH1X Mouse histone H1, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCAA hit 456 : 1440 1465 (fwd) 40.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACCAA 1440 CCAACGGCUCUUUUCAGAGCCACCAA 1465 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60005,sp|M33988.1|MMH2A1X Mouse histone H2A.1 gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 457 : 598 623 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 598 ACAAAGGCUCUUUUCAGAGCCACCCA 623 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60006,sp|M33989.1|MMH2A1XX Mouse histone H3.2 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 458 : 586 611 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 586 CCAAAGGCUCUUUUCAGAGCCACCCA 611 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60008,sp|X58069.1|MMH2AX Mouse mRNA for Histone H2A.X ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 459 : 525 550 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 525 ACAAAGGCCCUUUUAAGGGCCACCAC 550 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60010,sp|X80328.1|MMH2B143 M.musculus genes H2b-143, H3-143 ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCUA hit 460 : 3065 3090 (fwd) 36.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACC A 3065 AAAAAGGCUCUUUUAAGAGCCACCUA 3090 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60010,sp|X80328.1|MMH2B143 M.musculus genes H2b-143, H3-143 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 461 : 933 908 (rev) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 2278 CCAAAGGCUCUUUUAAGAGCCACCCA 2303 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60052,sp|X07182.1|MMH4R3 Mus musculus partial pre-mRNA for histone H4, 3' end ----isReversed: 0 ----hitSequence: CUAACGGCCCUUUUUAGGGCCAACCA hit 462 : 10 35 (fwd) 28.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGC:CUUUU AG:GCCA C+A 10 CUAACGGCCCUUUUUAGGGCCAACCA 35 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60217,sp|V00753.1|MMHI01 Mouse gene encoding the mouse histone H4. ----isReversed: 0 ----hitSequence: CUAACGGCCCUUUUUAGGGCCAACCA hit 463 : 605 630 (fwd) 28.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGC:CUUUU AG:GCCA C+A 605 CUAACGGCCCUUUUUAGGGCCAACCA 630 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60241,sp|J03482.1|MMHIS1 Mouse histone H1 gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 464 : 888 913 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 888 CAAAAGGCUCUUUUCAGAGCCACCAC 913 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60243,sp|M25365.1|MMHIS1A Mouse histone (H1-.1) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 465 : 875 900 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 875 CAAAAGGCUCUUUUCAGAGCCACCAC 900 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60244,sp|X16148.1|MMHIS2A3 Mouse H2a and H3 histone genes. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 466 : 1304 1329 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 1304 AAAAAGGCUCUUUUCAGAGCCACCCA 1329 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60244,sp|X16148.1|MMHIS2A3 Mouse H2a and H3 histone genes. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 467 : 2609 2634 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 2609 ACAAAGGCUCUUUUCAGAGCCACCAC 2634 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60245,sp|M37736.1|MMHIS2AR Mouse replication-dependent histone H2A.1 gene. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCAUCCA hit 468 : 548 573 (fwd) 33.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCA C+A 548 AAAAAGGCUCUUUUCAGAGCCAUCCA 573 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60247,sp|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) ----isReversed: 0 ----hitSequence: ACCAAGGCUCUUUUCAGAGCCACUCA hit 469 : 1361 1386 (fwd) 35.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AAGGCUCUUUUCAGAGCCAC +A 1361 ACCAAGGCUCUUUUCAGAGCCACUCA 1386 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60247,sp|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) ----isReversed: 1 ----hitSequence: UCAAAGGCUCUUUUAAGAGCCACCCA hit 470 : 253 228 (rev) 36.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUU AGAGCCACC+A 1545 UCAAAGGCUCUUUUAAGAGCCACCCA 1570 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60248,sp|X05863.1|MMHIS2BB Mouse H2B and H2A-pseudo histone genes (291B) ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUAA hit 471 : 266 241 (rev) 38.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC AA 1561 ACAAAGGCUCUUUUCAGAGCCACUAA 1586 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60250,sp|M32459.1|MMHIS3A Mouse histone H3 (H3.2-221) gene, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 472 : 851 876 (fwd) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 851 AAAACGGCUCUUUUAAGAGCCACCUC 876 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60251,sp|M32460.1|MMHIS3B Mouse histone H3 (H3.1-221) gene, complete cds. ----isReversed: 0 ----hitSequence: UUAAAGGCUCUUCUUAGAGCCACCCA hit 473 : 791 816 (fwd) 27.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGCUCUU U AGAGCCACC+A 791 UUAAAGGCUCUUCUUAGAGCCACCCA 816 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60252,sp|M32461.1|MMHIS3C Mouse histone H3 (H3.2-614) gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 474 : 776 801 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 776 ACAAAGGCUCUUUUCAGAGCCACCAC 801 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60253,sp|M32462.1|MMHIS3D Mouse histone H3 (H3.1-291) gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 475 : 770 795 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 770 UCAAAGGCUCUUUUCAGAGCCACCCA 795 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60254,sp|X13235.1|MMHIS412 Mouse histone H4 gene (clone 12) ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 476 : 575 600 (fwd) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 575 CAAAAGGCCCUUUUCAGGGCCACCCA 600 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60255,sp|X13236.1|MMHIS453 Mouse histone H4 gene ----isReversed: 0 ----hitSequence: CAAAAGGUCCUUUUCAGGACCACUCA hit 477 : 1000 1025 (fwd) 34.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGG::CUUUUCAG::CCAC +A 1000 CAAAAGGUCCUUUUCAGGACCACUCA 1025 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60257,sp|X02621.1|MMHISH2B Mouse gene for histone H2b ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 478 : 575 600 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 575 CCAAAGGCUCUUUUCAGAGCCACUCA 600 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60258,sp|X01684.1|MMHISH31 Mouse gene (H3.1) for histone H3 ----isReversed: 0 ----hitSequence: UUAAAGGCUCUUCUUAGAGCCACCCA hit 479 : 791 816 (fwd) 27.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGCUCUU U AGAGCCACC+A 791 UUAAAGGCUCUUCUUAGAGCCACCCA 816 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60259,sp|X01685.1|MMHISH32 Mouse gene (H3.2) for histone H3 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 480 : 594 619 (fwd) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 594 AAAACGGCUCUUUUAAGAGCCACCUC 619 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60260,sp|M15434.1|MMHISH3A Mouse histone H3.21 mRNA, 3' flank. ----isReversed: 0 ----hitSequence: UUAAAGGCUCUUCUUAGAGCCACCCA hit 481 : 25 50 (fwd) 27.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AAAGGCUCUU U AGAGCCACC+A 25 UUAAAGGCUCUUCUUAGAGCCACCCA 50 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60261,sp|X04652.1|MMHISH4S Mouse histone H4 gene 3' region with signals involved in mRNA processing ----isReversed: 0 ----hitSequence: CUAACGGCCCUUUUUAGGGCCAACCA hit 482 : 205 230 (fwd) 28.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGC:CUUUU AG:GCCA C+A 205 CUAACGGCCCUUUUUAGGGCCAACCA 230 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60262,sp|X02622.1|MMHISHSA Mouse gene fragment for histone H2a ----isReversed: 0 ----hitSequence: CCCAAGGCUCUUUUCAGAGCCACCAC hit 483 : 164 189 (fwd) 36.16 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +C AAGGCUCUUUUCAGAGCCACCA 164 CCCAAGGCUCUUUUCAGAGCCACCAC 189 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60264,sp|X16495.1|MMHIST2A Murine H2A gene for histone H2A ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 484 : 438 463 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 438 ACAAAGGCUCUUUUCAGAGCCACCCA 463 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60265,sp|X16496.1|MMHIST31 Murine H3.1 gene for histone H3.1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 485 : 545 570 (fwd) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 545 CCAAAGGCUCUUUUCAGAGCCAACCA 570 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60266,sp|Y12290.1|MMHIST431 M.musculus genes encoding histone H4, histone H3 and histone H1.1 ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGAGCCACCAA hit 486 : 4568 4593 (fwd) 40.19 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUUCAGAGCCACCAA 4568 CCAACGGCUCUUUUCAGAGCCACCAA 4593 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60266,sp|Y12290.1|MMHIST431 M.musculus genes encoding histone H4, histone H3 and histone H1.1 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 487 : 2093 2068 (rev) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 3505 CCAAAGGCUCUUUUCAGAGCCACACA 3530 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60266,sp|Y12290.1|MMHIST431 M.musculus genes encoding histone H4, histone H3 and histone H1.1 ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUCUCAGGGCCGCCCA hit 488 : 1003 978 (rev) 29.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUU UCAG:GCC CC+A 4595 CCAAAGGCCCUUCUCAGGGCCGCCCA 4620 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60268,sp|Z38128.1|MMHISTH1 M.musculus gene for histone H1 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCCA hit 489 : 1436 1461 (fwd) 39.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACC+A 1436 CAAACGGCUCUUUUCAGAGCCACCCA 1461 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60269,sp|Y12291.1|MMHISTH12 M.musculus genes encoding histone H1.2 ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 490 : 1883 1908 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 1883 CAAAAGGCUCUUUUCAGAGCCACCAC 1908 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60270,sp|Y12292.1|MMHISTH14 M.musculus genes encoding histone H1.4 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 491 : 2294 2319 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 2294 CCAAAGGCUCUUUUCAGAGCCACCCA 2319 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #60271,sp|Z35401.1|MMHISTH2A M.musculus C3H gene for histone H2A.X ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 492 : 1100 1125 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 1100 ACAAAGGCCCUUUUAAGGGCCACCAC 1125 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #71074,sp|X90778.1|MMTSHIS2B M.musculus H2B gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 493 : 582 607 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 582 CCAAAGGCUCUUUUAAGAGCCACCCA 607 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75260,sp|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 494 : 2514 2539 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 2514 CCAAAGGCUCUUUUCAGAGCCACCUA 2539 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75260,sp|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds. ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUCCA hit 495 : 1409 1384 (rev) 33.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA C+A 1414 ACAAAGGCUCUUUUCAGAGCCAUCCA 1439 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75260,sp|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCC hit 496 : 60 35 (rev) 38.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+ 2763 CCAAAGGCUCUUUUCAGAGCCACCCC 2788 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75261,sp|U62670.1|MMU62670 Mus musculus histone H3.1-I (H3-I) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCCUC hit 497 : 577 602 (fwd) 33.65 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC CC 577 CAAAAGGCUCUUUUCAGAGCCCCCUC 602 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75262,sp|U62671.1|MMU62671 Mus musculus histone H3.2-B (H3-B) gene, complete cds. ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUAAGAGCCACCUC hit 498 : 929 954 (fwd) 34.64 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUU AGAGCCACC 929 AAAACGGCUCUUUUAAGAGCCACCUC 954 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75263,sp|U62672.1|MMU62672 Mus musculus histone H3.1-D (H3-D) and histone H4-D (H4-D) genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 499 : 795 820 (fwd) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 795 CCAAAGGCUCUUUUCAGAGCCACACA 820 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75263,sp|U62672.1|MMU62672 Mus musculus histone H3.1-D (H3-D) and histone H4-D (H4-D) genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUCUCAGGGCCGCCCA hit 500 : 1885 1910 (fwd) 29.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUU UCAG:GCC CC+A 1885 CCAAAGGCCCUUCUCAGGGCCGCCCA 1910 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75264,sp|U62673.1|MMU62673 Mus musculus histone H2a(A)-613, histone H2a(B)-613, and histone H2b-613 (H2b) genes, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCACCAA hit 501 : 1076 1101 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 1076 AAAAAGGCUCUUUUAAGAGCCACCAA 1101 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75264,sp|U62673.1|MMU62673 Mus musculus histone H2a(A)-613, histone H2a(B)-613, and histone H2b-613 (H2b) genes, complete cds. ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUUAGAGCCACCAA hit 502 : 1186 1161 (rev) 38.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCCACCAA 1433 AAAAAGGCUCUUUUUAGAGCCACCAA 1458 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75265,sp|U62674.1|MMU62674 Mus musculus histone H2a.2-615 (H2a-615), and histone H3.2-615 (H3-615) genes, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 503 : 1453 1478 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 1453 AAAAAGGCUCUUUUCAGAGCCACCCA 1478 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75265,sp|U62674.1|MMU62674 Mus musculus histone H2a.2-615 (H2a-615), and histone H3.2-615 (H3-615) genes, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 504 : 2752 2777 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 2752 ACAAAGGCUCUUUUCAGAGCCACCAC 2777 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75266,sp|U62675.1|MMU62675 Mus musculus histone H3.2-616 (H3-616), and histone H2b-616 (H2b-616) genes, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 505 : 1017 1042 (fwd) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 1017 ACAAAGGCUCUUUUCAGAGCCACCUA 1042 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75266,sp|U62675.1|MMU62675 Mus musculus histone H3.2-616 (H3-616), and histone H2b-616 (H2b-616) genes, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACUUU hit 506 : 2053 2078 (fwd) 33.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCAC 2053 CAAAAGGCUCUUUUCAGAGCCACUUU 2078 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75271,sp|U62922.1|MMU62922 Mus musculus histone H1b gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 507 : 1029 1054 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 1029 CCAAAGGCUCUUUUCAGAGCCACCUA 1054 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/mus.dat.fasta.gz ----sequence: #75272,sp|U62923.1|MMU62923 Mus musculus histone H1d gene, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCACCCA hit 508 : 1909 1934 (fwd) 39.31 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCCACC+A 1909 CAAACGGCUCUUUUCAGAGCCACCCA 1934 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/org.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/phg.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #10906,sp|AF009119.1|AF009119 Aulacospermum simplex internal transcribed spacer 2 (ITS2), 18S-28S region, complete sequence. ----isReversed: 1 ----hitSequence: AAAAAGGGUCUUUUUACAACCACCAA hit 509 : 146 121 (rev) 26.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG U UUUU A A CCACCAA 73 AAAAAGGGUCUUUUUACAACCACCAA 98 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #10907,sp|AF009120.1|AF009120 Aulacospermum anomalum internal transcribed spacer 2 (ITS2), 18S-28S region, complete sequence. ----isReversed: 1 ----hitSequence: ACAAAGGGUCUUUUUACAACCACCAA hit 510 : 146 121 (rev) 26.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG U UUUU A A CCACCAA 73 ACAAAGGGUCUUUUUACAACCACCAA 98 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pln.dat.fasta.gz ----sequence: #130200,sp|AY038221.1|AY038221 Tongoloa elata internal transcribed spacer 2, complete sequence. ----isReversed: 1 ----hitSequence: AAAACGGGUCUUUUUACAACCACAAA hit 511 : 145 120 (rev) 24.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GG U UUUU A A CCAC AA 74 AAAACGGGUCUUUUUACAACCACAAA 99 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro01.dat.fasta.gz ----sequence: #30423,sp|AE016954.1|AE016954 Enterococcus faecalis V583, section 8 of 11 of the complete genome. ----isReversed: 1 ----hitSequence: CCAAAGGUUCAUUUCAGAACCACCGA hit 512 : 168838 168813 (rev) 26.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG:UC UUUC GA:CCACC A 131710 CCAAAGGUUCAUUUCAGAACCACCGA 131735 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro02.dat.fasta.gz ----sequence: #44083,sp|AF508325.1|AF508325 Enterococcus faecalis DNA polymerase III C (polC) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGUUCAUUUCCGAACCACCGA hit 513 : 2278 2303 (fwd) 26.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG:UC UUUC GA:CCACC A 2278 CCAAAGGUUCAUUUCCGAACCACCGA 2303 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro03.dat.fasta.gz ----sequence: #42603,sp|M76442.1|BTCRSPR Bacillus thuringiensis crystal protein gene, complete cds. ----isReversed: 0 ----hitSequence: CCACCUGCUCUUUUCAGAGCCUCCAA hit 514 : 1675 1700 (fwd) 25.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CA +:GCUCUUUUCAGAGC: CCAA 1675 CCACCUGCUCUUUUCAGAGCCUCCAA 1700 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro03.dat.fasta.gz ----sequence: #48057,sp|AJ457136.1|DTO457136 Desulfobacula toluolica ORF1 (partial), ORF2, ORF3, ORF4, ORF9 (partial) dsrA, dsrB, dsrD and dsrN genes ----isReversed: 1 ----hitSequence: AAAAAGGUUUUUUUAAAACCCACUAA hit 515 : 4003 3978 (rev) 25.26 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:U:UUUU A:A:CCAC AA 4866 AAAAAGGUUUUUUUAAAACCCACUAA 4891 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro04.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/pro04.dat.fasta.gz ----sequence: #5717,sp|U32690.1|HI32690 Haemophilus influenzae Rd section 5 of 163 of the complete genome. ----isReversed: 0 ----hitSequence: CAAAAUGCUUUUUUAAAAGCAACCCA hit 516 : 4403 4428 (fwd) 25.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAA:GCU:UUUU A:AGC:ACC+A 4403 CAAAAUGCUUUUUUAAAAGCAACCCA 4428 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/pro05.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #10579,sp|X80330.1|CLH2A232 C.longicaudatus genes for histones H2a.2 and H3.2 ----isReversed: 0 ----hitSequence: AAAACGGCUCUUUUCAGAGCCACCCA hit 517 : 1457 1482 (fwd) 39.43 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGCUCUUUUCAGAGCCACC+A 1457 AAAACGGCUCUUUUCAGAGCCACCCA 1482 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #10579,sp|X80330.1|CLH2A232 C.longicaudatus genes for histones H2a.2 and H3.2 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACACU hit 518 : 2792 2817 (fwd) 35.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC + 2792 ACAAAGGCUCUUUUCAGAGCCACACU 2817 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #12012,sp|X80327.1|MPMP323 M.pahari genes mpH323 and mph2a23 ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUCAGAGCCACCCA hit 519 : 1263 1288 (fwd) 39.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUUCAGAGCCACC+A 1263 AAAAAGGCUCUUUUCAGAGCCACCCA 1288 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #12012,sp|X80327.1|MPMP323 M.pahari genes mpH323 and mph2a23 ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAC hit 520 : 2578 2603 (fwd) 39.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCA 2578 ACAAAGGCUCUUUUCAGAGCCACCAC 2603 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #12013,sp|X80324.1|MPMPH3110 M.pahari mpH3110 gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACACA hit 521 : 879 904 (fwd) 38.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 879 CCAAAGGCUCUUUUCAGAGCCACACA 904 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #12014,sp|X80326.1|MPMPH312 M.pahari mpH312 gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 522 : 477 502 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 477 CCAAAGGCUCUUUUCAGAGCCACCCA 502 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #12015,sp|X80325.1|MPMPH315 M.pahari mpH315 gene ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 523 : 612 637 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 612 UCAAAGGCUCUUUUCAGAGCCACCCA 637 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16423,sp|X67320.1|RNH1D2B R.norvegicus genes for H1d-histone and H2B-histone ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 524 : 1107 1132 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1107 CCAAAGGCUCUUUUCAGAGCCACCCA 1132 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16425,sp|M28409.1|RNH1TH4T Rat testis-specific histone H1t and histone H4t, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 525 : 3104 3129 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 3104 CCAAAGGCUCUUUUAAGAGCCACUUA 3129 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16425,sp|M28409.1|RNH1TH4T Rat testis-specific histone H1t and histone H4t, complete cds. ----isReversed: 1 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 526 : 4706 4681 (rev) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 2156 CAAAAGGCCCUUUUCAGGGCCACCCA 2181 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16427,sp|X59961.1|RNH2AB R.norvegicus genes for H2A and H2B histones ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAC hit 527 : 1308 1333 (fwd) 32.96 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 1308 CCAAAGGCUCUUUUCAGAGCCAUCAC 1333 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16427,sp|X59961.1|RNH2AB R.norvegicus genes for H2A and H2B histones ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUAA hit 528 : 183 158 (rev) 38.53 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC AA 1453 CCAAAGGCUCUUUUCAGAGCCACUAA 1478 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16430,sp|L19706.1|RNH3HISTO Rattus norvegicus H3 histone gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAC hit 529 : 36 61 (fwd) 32.96 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 36 CCAAAGGCUCUUUUCAGAGCCAUCAC 61 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16430,sp|L19706.1|RNH3HISTO Rattus norvegicus H3 histone gene, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGGCUCUUUUUAGAGCCACUAA hit 530 : 1955 1980 (fwd) 34.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGCUCUUUU AGAGCCAC AA 1955 UAAAAGGCUCUUUUUAGAGCCACUAA 1980 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16432,sp|X13554.1|RNH4G Rat H4 gene for somatic histone H4 ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUCAGGGCCCCCAA hit 531 : 900 925 (fwd) 37.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUUCAG:GCC CCAA 900 ACAAAGGCCCUUUUCAGGGCCCCCAA 925 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16493,sp|M31229.1|RNHIS1D Rat histone H1d gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 532 : 1018 1043 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1018 CCAAAGGCUCUUUUCAGAGCCACCCA 1043 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16494,sp|M13170.1|RNHIS1TP Rat testis-specific H1 histone variant H1t gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 533 : 919 944 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 919 CCAAAGGCUCUUUUAAGAGCCACUUA 944 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16496,sp|M27433.1|RNHIS4G Rattus norvegicus histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCACCCA hit 534 : 530 555 (fwd) 38.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCCACC+A 530 CAAAAGGCCCUUUUCAGGGCCACCCA 555 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16499,sp|M18045.1|RNHISTS Rat testis-specific histone TH2B mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAC hit 535 : 448 470 (fwd) 25.89 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC 448 CCAAAGGCUCUUUUCAGAGCCAC--- 470 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #16500,sp|M18046.1|RNHISTSA Rat testis-specific histone H2B mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAC hit 536 : 448 470 (fwd) 25.89 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC 448 CCAAAGGCUCUUUUCAGAGCCAC--- 470 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20533,sp|X59962.1|RNTH2AB R.norvegicus genes for TH2A and TH2B histones ----isReversed: 0 ----hitSequence: AAAAUGGCUCUUUUCAGAGCCACCUU hit 537 : 1566 1591 (fwd) 30.09 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA GGCUCUUUUCAGAGCCACC 1566 AAAAUGGCUCUUUUCAGAGCCACCUU 1591 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/rod.dat.fasta.gz ----sequence: #20533,sp|X59962.1|RNTH2AB R.norvegicus genes for TH2A and TH2B histones ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 538 : 426 401 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1228 CCAAAGGCUCUUUUCAGAGCCACCCA 1253 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrl.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #4950,sp|AC144708.2|AC144708 Danio rerio clone CH211-173B16, complete sequence. ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 539 : 10010 9985 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 35373 ACAACGGUACUUUUCAGUGCCACCAA 35398 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #5413,sp|AF017147.1|AF017147 Salmo salar histone (H3) gene, promoter sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 540 : 61 86 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 61 CCAAAGGCUCUUUUAAGAGCCAACCA 86 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #8699,sp|AF112374.1|AF112374 Danio rerio odorant receptor gene cluster. ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 541 : 56844 56819 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 83815 ACAACGGUACUUUUCAGUGCCACCAA 83840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #13724,sp|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUAAGAGCCACCCA hit 542 : 1222 1247 (fwd) 34.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU U AGAGCCACC+A 1222 CCAAAGGCUCUUCUAAGAGCCACCCA 1247 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #13724,sp|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds. ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUCUCAGAGCCACCAC hit 543 : 2079 2054 (rev) 35.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUU UCAGAGCCACCA 42 ACAAAGGCUCUUCUCAGAGCCACCAC 67 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #13725,sp|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCGCCAC hit 544 : 1089 1114 (fwd) 29.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCC CCA 1089 CCAAAGGCUCUUCUCAGAGCCGCCAC 1114 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #13725,sp|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUAAGAGCCGCCCA hit 545 : 1641 1666 (fwd) 28.85 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU U AGAGCC CC+A 1641 CCAAAGGCUCUUCUAAGAGCCGCCCA 1666 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #13725,sp|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds. ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUCUCAGAGCCGCCAC hit 546 : 2355 2330 (rev) 29.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUU UCAGAGCC CCA 42 ACAAAGGCUCUUCUCAGAGCCGCCAC 67 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #19135,sp|AF416491.1|AF416491 Labeo rohita H3 gene, promoter region. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 547 : 61 86 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 61 CCAAAGGCUCUUUUAAGAGCCAACCA 86 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #19136,sp|AF416492.1|AF416492 Catla catla H3 gene, promoter region. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 548 : 61 86 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 61 CCAAAGGCUCUUUUAAGAGCCAACCA 86 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #19137,sp|AF416493.1|AF416493 Heteropneustes fossilis H3 gene, promoter region. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 549 : 61 86 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 61 CCAAAGGCUCUUUUAAGAGCCAACCA 86 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #19141,sp|AF416497.1|AF416497 Clarias batrachus H3 gene, promoter region. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCAAACCA hit 550 : 58 83 (fwd) 29.10 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA GCUCUUUU AGAGC A C+A 58 CCAAAGGCUCUUUUAAGAGCAAACCA 83 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #19143,sp|AF416499.1|AF416499 Oncorhynchus mykiss H3 gene, promoter region. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 551 : 60 85 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 60 CCAAAGGCUCUUUUAAGAGCCAACCA 85 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23727,sp|AL590134.7|AL590134 Zebrafish DNA sequence from clone RP71-10G3 in linkage group 9 Contains DIRS-1 Danio rerio 1 (DIRSDR1), a putative novel non-LT ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 552 : 47561 47536 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 56716 ACAACGGUACUUUUCAGUGCCACCAA 56741 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23736,sp|AL590155.9|AL590155 Zebrafish DNA sequence from clone RP71-79P20 Contains part of the putative novel DIRS-1 like retrotransposon DIRSDR2 (DIRS-1 Da ----isReversed: 0 ----hitSequence: ACAAAGGUACUUUUCAGUGCCACCAA hit 553 : 323 348 (fwd) 30.96 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG: CUUUUCAG :CCACCAA 323 ACAAAGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23802,sp|AL596203.6|AL596203 Zebrafish DNA sequence from clone BUSM1-94E17 in linkage group 3 Contains part of a novel gene similar to NGFR (nerve growth fa ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 554 : 8839 8814 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 95268 ACAACGGUACUUUUCAGUGCCACCAA 95293 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23808,sp|AL603786.3|AL603786 Zebrafish DNA sequence from clone BUSM1-57F23 Contains a novel gene for a protein similar to cystatin, part of two novel genes ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACGAA hit 555 : 15456 15431 (rev) 25.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCAC AA 79257 CCAACGGUACUUUUCAGUGCCACGAA 79282 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23814,sp|AL606722.18|AL606722 Zebrafish DNA sequence from clone BUSM1-27N24 in linkage group 1 Contains the zebrafish ednrb1 gene for endothelin receptor B a ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 556 : 2243 2218 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 72668 CCAACGGUACUUUUCAGUGCCACCAA 72693 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23818,sp|AL606809.8|AL606809 Zebrafish DNA sequence from clone BUSM1-71J22 in linkage group 15 Contains to novel reverse transcriptase pseudogenes and a CpG ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 557 : 7878 7853 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 65383 ACAACGGUACUUUUCAGUGCCACCAA 65408 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23819,sp|AL606972.12|AL606972 Zebrafish DNA sequence from clone RP71-76A6 in linkage group 22 Contains part of a novel gene for a protein similar to vertebra ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 558 : 22669 22644 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 61036 ACAACGGUACUUUUCAGUGCCACCAA 61061 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23834,sp|AL627261.10|AL627261 Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains three CpG islands. ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 559 : 89167 89142 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 58226 ACAACGGUACUUUUCAGUGCCACCAA 58251 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23873,sp|AL672080.11|AL672080 Zebrafish DNA sequence from clone BUSM1-202M12 in linkage group 18 Contains six CpG islands. ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUUAGUGCCACCAA hit 560 : 2868 2893 (fwd) 28.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUU AG :CCACCAA 2868 CCAACGGUACUUUUUAGUGCCACCAA 2893 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23873,sp|AL672080.11|AL672080 Zebrafish DNA sequence from clone BUSM1-202M12 in linkage group 18 Contains six CpG islands. ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 561 : 29114 29139 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 29114 ACAACGGUACUUUUCAGUGCCACCAA 29139 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23878,sp|AL672107.5|AL672107 Zebrafish DNA sequence from clone BUSM1-84N18 in linkage group 1 Contains a novel lambda recombinase like pseudogene, a putativ ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 562 : 75864 75889 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 75864 ACAACGGUACUUUUCAGUGCCACCAA 75889 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23888,sp|AL672161.18|AL672161 Zebrafish DNA sequence from clone BUSM1-1I3 in linkage group 11 Contains part of a novel gene similar to human CADPS (Ca2+ depe ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 563 : 51721 51696 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 32182 ACAACGGUACUUUUCAGUGCCACCAA 32207 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23897,sp|AL672211.7|AL672211 Zebrafish DNA sequence from clone BUSM1-6A2 in linkage group 11 Contains a novel gene similar to OGFR, the fez gene for forebra ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 564 : 39470 39445 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 41359 ACAACGGUACUUUUCAGUGCCACCAA 41384 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23908,sp|AL713963.13|AL713963 Zebrafish DNA sequence from clone BUSM1-78P07 in linkage group 1 ----isReversed: 0 ----hitSequence: CCAACGGCACUUUUCAGUGCCACGAA hit 565 : 43785 43810 (fwd) 29.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCAC AA 43785 CCAACGGCACUUUUCAGUGCCACGAA 43810 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23908,sp|AL713963.13|AL713963 Zebrafish DNA sequence from clone BUSM1-78P07 in linkage group 1 ----isReversed: 0 ----hitSequence: CCAACGGCACUUUUCAGUGCCACGAA hit 566 : 44130 44155 (fwd) 29.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCAC AA 44130 CCAACGGCACUUUUCAGUGCCACGAA 44155 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23922,sp|AL732398.9|AL732398 Zebrafish DNA sequence from clone XX-36G15 in linkage group 9 Contains the 5' part of a novel gene similar to human CED-6 and t ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 567 : 31631 31656 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 31631 ACAACGGUACUUUUCAGUGCCACCAA 31656 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23922,sp|AL732398.9|AL732398 Zebrafish DNA sequence from clone XX-36G15 in linkage group 9 Contains the 5' part of a novel gene similar to human CED-6 and t ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 568 : 48443 48468 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 48443 ACAACGGUACUUUUCAGUGCCACCAA 48468 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23935,sp|AL732511.6|AL732511 Zebrafish DNA sequence from clone CH211-140G4 in linkage group 19 Contains two CpG islands. ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 569 : 25719 25694 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 150068 ACAACGGUACUUUUCAGUGCCACCAA 150093 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23945,sp|AL732632.4|AL732632 Zebrafish DNA sequence from clone CH211-140K5 in linkage group 1 Contains two novel retroelements, the 5' part of a novel gene ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 570 : 123908 123883 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 35575 ACAACGGUACUUUUCAGUGCCACCAA 35600 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23952,sp|AL772144.4|AL772144 Zebrafish DNA sequence from clone CH211-164J3 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 571 : 81441 81466 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 81441 CCAACGGUACUUUUCAGUGCCACCAA 81466 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23967,sp|AL772273.11|AL772273 Zebrafish DNA sequence from clone CH211-153P8 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 572 : 100663 100638 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 71168 ACAACGGUACUUUUCAGUGCCACCAA 71193 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23967,sp|AL772273.11|AL772273 Zebrafish DNA sequence from clone CH211-153P8 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 573 : 77899 77874 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 93932 ACAACGGUACUUUUCAGUGCCACCAA 93957 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #23974,sp|AL772332.6|AL772332 Zebrafish DNA sequence from clone CH211-150A22 in linkage group 1 Contains part of a gene similar to human PET112 for PET112-li ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 574 : 118987 118962 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 56776 CCAACGGUACUUUUCAGUGCCACCAA 56801 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24004,sp|AL807827.11|AL807827 Zebrafish DNA sequence from clone CH211-220J6 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 575 : 30675 30650 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 168467 ACAACGGUACUUUUCAGUGCCACCAA 168492 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24008,sp|AL808121.7|AL808121 Zebrafish DNA sequence from clone CH211-251B22 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 576 : 145576 145551 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 8875 ACAACGGUACUUUUCAGUGCCACCAA 8900 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24020,sp|AL840627.7|AL840627 Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 577 : 12826 12801 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 151550 ACAACGGUACUUUUCAGUGCCACCAA 151575 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24026,sp|AL844150.6|AL844150 Zebrafish DNA sequence from clone DKEY-246K2 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 578 : 65677 65652 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 137382 ACAACGGUACUUUUCAGUGCCACCAA 137407 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24035,sp|AL844193.6|AL844193 Zebrafish DNA sequence from clone DKEY-28J3 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 579 : 142687 142662 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 68214 ACAACGGUACUUUUCAGUGCCACCAA 68239 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24039,sp|AL844217.7|AL844217 Zebrafish DNA sequence from clone DKEY-218L17 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 580 : 144369 144394 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 144369 ACAACGGUACUUUUCAGUGCCACCAA 144394 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24041,sp|AL844514.12|AL844514 Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 581 : 71153 71178 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 71153 CCAACGGUACUUUUCAGUGCCACCAA 71178 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24043,sp|AL844521.15|AL844521 Zebrafish DNA sequence from clone DKEY-155O15 in linkage group 19 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 582 : 83702 83727 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 83702 ACAACGGUACUUUUCAGUGCCACCAA 83727 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24054,sp|AL844899.33|AL844899 Zebrafish DNA sequence from clone CH211-287K8 in linkage group 5 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 583 : 62475 62450 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 105383 ACAACGGUACUUUUCAGUGCCACCAA 105408 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24072,sp|AL845339.11|AL845339 Zebrafish DNA sequence from clone CH211-196B6 in linkage group 20 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 584 : 28972 28947 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 2317 ACAACGGUACUUUUCAGUGCCACCAA 2342 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24075,sp|AL845359.15|AL845359 Zebrafish DNA sequence from clone CH211-11M22 in linkage group 20 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 585 : 98542 98517 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 77391 ACAACGGUACUUUUCAGUGCCACCAA 77416 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24101,sp|AL845526.24|AL845526 Zebrafish DNA sequence from clone CH211-11P18 in linkage group 22 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 586 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24103,sp|AL845544.11|AL845544 Zebrafish DNA sequence from clone BUSM1-133F4 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 587 : 84080 84105 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 84080 ACAACGGUACUUUUCAGUGCCACCAA 84105 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24109,sp|AL928556.7|AL928556 Zebrafish DNA sequence from clone DKEY-63M7 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 588 : 21754 21779 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 21754 ACAACGGUACUUUUCAGUGCCACCAA 21779 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24110,sp|AL928573.14|AL928573 Zebrafish DNA sequence from clone DKEY-11F5 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 589 : 28774 28749 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 215698 ACAACGGUACUUUUCAGUGCCACCAA 215723 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24115,sp|AL928628.9|AL928628 Zebrafish DNA sequence from clone DKEY-5G18 in linkage group 7 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 590 : 7227 7202 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 222716 ACAACGGUACUUUUCAGUGCCACCAA 222741 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24152,sp|AL928825.6|AL928825 Zebrafish DNA sequence from clone CH211-284P13 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 591 : 13867 13892 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 13867 ACAACGGUACUUUUCAGUGCCACCAA 13892 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24171,sp|AL928880.5|AL928880 Zebrafish DNA sequence from clone CH211-69P21 in linkage group 7 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 592 : 57638 57613 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 41213 ACAACGGUACUUUUCAGUGCCACCAA 41238 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24178,sp|AL928917.8|AL928917 Zebrafish DNA sequence from clone CH211-103D12 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 593 : 166277 166302 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 166277 ACAACGGUACUUUUCAGUGCCACCAA 166302 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24185,sp|AL928941.12|AL928941 Zebrafish DNA sequence from clone CH211-236L14 in linkage group 25 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 594 : 22707 22732 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 22707 ACAACGGUACUUUUCAGUGCCACCAA 22732 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24189,sp|AL928954.9|AL928954 Zebrafish DNA sequence from clone CH211-127D4 in linkage group 5 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 595 : 120881 120906 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 120881 ACAACGGUACUUUUCAGUGCCACCAA 120906 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24200,sp|AL928997.7|AL928997 Zebrafish DNA sequence from clone CH211-125O15 ----isReversed: 0 ----hitSequence: ACAACGGAACUUUUCAGUGCCACCAA hit 596 : 86364 86389 (fwd) 29.12 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 86364 ACAACGGAACUUUUCAGUGCCACCAA 86389 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24200,sp|AL928997.7|AL928997 Zebrafish DNA sequence from clone CH211-125O15 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 597 : 119130 119155 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 119130 ACAACGGUACUUUUCAGUGCCACCAA 119155 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24237,sp|AL929090.4|AL929090 Zebrafish DNA sequence from clone CH211-14A14 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 598 : 139012 138987 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 39066 CCAACGGUACUUUUCAGUGCCACCAA 39091 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24239,sp|AL929093.6|AL929093 Zebrafish DNA sequence from clone CH211-149P10 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 599 : 122460 122435 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 54789 ACAACGGUACUUUUCAGUGCCACCAA 54814 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24258,sp|AL929150.12|AL929150 Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 600 : 215754 215779 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 215754 ACAACGGUACUUUUCAGUGCCACCAA 215779 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24265,sp|AL929169.7|AL929169 Zebrafish DNA sequence from clone BUSM1-30C14 in linkage group 1 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 601 : 47754 47779 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 47754 CCAACGGUACUUUUCAGUGCCACCAA 47779 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24278,sp|AL929201.6|AL929201 Zebrafish DNA sequence from clone CH211-66G24 in linkage group 8 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 602 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24300,sp|AL929261.26|AL929261 Zebrafish DNA sequence from clone CH211-245H5 in linkage group 24 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 603 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24300,sp|AL929261.26|AL929261 Zebrafish DNA sequence from clone CH211-245H5 in linkage group 24 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 604 : 79818 79843 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 79818 ACAACGGUACUUUUCAGUGCCACCAA 79843 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24300,sp|AL929261.26|AL929261 Zebrafish DNA sequence from clone CH211-245H5 in linkage group 24 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 605 : 11454 11429 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 182147 ACAACGGUACUUUUCAGUGCCACCAA 182172 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24312,sp|AL929287.5|AL929287 Zebrafish DNA sequence from clone CH211-67L8 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 606 : 192906 192881 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 296 CCAACGGUACUUUUCAGUGCCACCAA 321 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24348,sp|AL929344.8|AL929344 Zebrafish DNA sequence from clone DKEYP-115D2 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 607 : 99462 99437 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 91437 ACAACGGUACUUUUCAGUGCCACCAA 91462 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24354,sp|AL929391.10|AL929391 Zebrafish DNA sequence from clone CH211-155I14 in linkage group 20 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 608 : 117638 117663 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 117638 ACAACGGUACUUUUCAGUGCCACCAA 117663 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24368,sp|AL929508.6|AL929508 Zebrafish DNA sequence from clone CH211-158G13 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 609 : 103665 103640 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 76365 ACAACGGUACUUUUCAGUGCCACCAA 76390 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24369,sp|AL929509.14|AL929509 Zebrafish DNA sequence from clone CH211-165I22 in linkage group 1 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 610 : 34544 34569 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 34544 ACAACGGUACUUUUCAGUGCCACCAA 34569 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24371,sp|AL929514.7|AL929514 Zebrafish DNA sequence from clone CH211-187D9 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 611 : 7975 7950 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 166499 ACAACGGUACUUUUCAGUGCCACCAA 166524 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24377,sp|AL929533.12|AL929533 Zebrafish DNA sequence from clone DKEY-18E17 in linkage group 5 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 612 : 24273 24248 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 227098 ACAACGGUACUUUUCAGUGCCACCAA 227123 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24385,sp|AL929568.12|AL929568 Zebrafish DNA sequence from clone CH211-59K8 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 613 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24389,sp|AL929582.10|AL929582 Zebrafish DNA sequence from clone CH211-117M12 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 614 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24397,sp|AL935029.6|AL935029 Zebrafish DNA sequence from clone CH211-168J20 in linkage group 1 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 615 : 14345 14320 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 143091 ACAACGGUACUUUUCAGUGCCACCAA 143116 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24399,sp|AL935031.11|AL935031 Zebrafish DNA sequence from clone CH211-93I23 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 616 : 178139 178114 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24404,sp|AL935038.8|AL935038 Zebrafish DNA sequence from clone CH211-187I23 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 617 : 101281 101256 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 37797 ACAACGGUACUUUUCAGUGCCACCAA 37822 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24418,sp|AL935114.7|AL935114 Zebrafish DNA sequence from clone CH211-182P11 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 618 : 85138 85163 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 85138 CCAACGGUACUUUUCAGUGCCACCAA 85163 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24432,sp|AL935144.10|AL935144 Zebrafish DNA sequence from clone CH211-89B14 in linkage group 23 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 619 : 13288 13263 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 142039 ACAACGGUACUUUUCAGUGCCACCAA 142064 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24437,sp|AL935160.11|AL935160 Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 620 : 82952 82927 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 57450 ACAACGGUACUUUUCAGUGCCACCAA 57475 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24444,sp|AL935173.9|AL935173 Zebrafish DNA sequence from clone CH211-196D9 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 621 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24445,sp|AL935174.11|AL935174 Zebrafish DNA sequence from clone CH211-195B21 in linkage group 17 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 622 : 8571 8596 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 8571 ACAACGGUACUUUUCAGUGCCACCAA 8596 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24445,sp|AL935174.11|AL935174 Zebrafish DNA sequence from clone CH211-195B21 in linkage group 17 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 623 : 77753 77728 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 117854 ACAACGGUACUUUUCAGUGCCACCAA 117879 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24457,sp|AL935195.14|AL935195 Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 624 : 96739 96714 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 97315 ACAACGGUACUUUUCAGUGCCACCAA 97340 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24470,sp|AL935208.8|AL935208 Zebrafish DNA sequence from clone CH211-241N17 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 625 : 324 349 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 324 ACAACGGUACUUUUCAGUGCCACCAA 349 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24478,sp|AL935274.13|AL935274 Zebrafish DNA sequence from clone CH211-249C2 in linkage group 22 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 626 : 5130 5105 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 99067 ACAACGGUACUUUUCAGUGCCACCAA 99092 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24480,sp|AL935279.5|AL935279 Zebrafish DNA sequence from clone CH211-195M9 in linkage group 24 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUUAAAGCCAUAAA hit 627 : 84396 84421 (fwd) 24.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCU UUUU A AGCCA AA 84396 CCAAAGGCUCUUUUUAAAGCCAUAAA 84421 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24483,sp|AL935283.16|AL935283 Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 628 : 49539 49564 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 49539 ACAACGGUACUUUUCAGUGCCACCAA 49564 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24498,sp|AL935303.7|AL935303 Zebrafish DNA sequence from clone CH211-197A2 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 629 : 33719 33744 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 33719 ACAACGGUACUUUUCAGUGCCACCAA 33744 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24507,sp|AL935317.10|AL935317 Zebrafish DNA sequence from clone CH211-199I10 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 630 : 191941 191966 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 191941 ACAACGGUACUUUUCAGUGCCACCAA 191966 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24523,sp|AL953855.9|AL953855 Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 631 : 101898 101923 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 101898 ACAACGGUACUUUUCAGUGCCACCAA 101923 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24533,sp|AL953878.19|AL953878 Zebrafish DNA sequence from clone CH211-284P22 in linkage group 3 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 632 : 123555 123530 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 34580 ACAACGGUACUUUUCAGUGCCACCAA 34605 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24556,sp|AL954132.14|AL954132 Zebrafish DNA sequence from clone DKEY-32N7 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 633 : 130944 130969 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 130944 ACAACGGUACUUUUCAGUGCCACCAA 130969 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24570,sp|AL954179.9|AL954179 Zebrafish DNA sequence from clone DKEY-33I12 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 634 : 130495 130520 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 130495 ACAACGGUACUUUUCAGUGCCACCAA 130520 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24576,sp|AL954188.9|AL954188 Zebrafish DNA sequence from clone DKEY-27J17 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 635 : 171652 171677 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 171652 CCAACGGUACUUUUCAGUGCCACCAA 171677 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24597,sp|AL954332.7|AL954332 Zebrafish DNA sequence from clone BUSM1-138C24 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACACA hit 636 : 6601 6626 (fwd) 28.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCAC +A 6601 ACAACGGUACUUUUCAGUGCCACACA 6626 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24603,sp|AL954359.5|AL954359 Zebrafish DNA sequence from clone CH211-270N8 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 637 : 22297 22322 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 22297 ACAACGGUACUUUUCAGUGCCACCAA 22322 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24603,sp|AL954359.5|AL954359 Zebrafish DNA sequence from clone CH211-270N8 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 638 : 147855 147830 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 19538 ACAACGGUACUUUUCAGUGCCACCAA 19563 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24625,sp|AL954679.7|AL954679 Zebrafish DNA sequence from clone DKEY-63J12 in linkage group 20 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 639 : 48173 48198 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 48173 ACAACGGUACUUUUCAGUGCCACCAA 48198 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24629,sp|AL954689.16|AL954689 Zebrafish DNA sequence from clone DKEYP-51G2 in linkage group 14 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 640 : 141932 141957 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 141932 ACAACGGUACUUUUCAGUGCCACCAA 141957 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24646,sp|AL954746.8|AL954746 Zebrafish DNA sequence from clone DKEY-10P5 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 641 : 193508 193533 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 193508 ACAACGGUACUUUUCAGUGCCACCAA 193533 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24658,sp|AL954832.12|AL954832 Zebrafish DNA sequence from clone DKEY-15O4 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 642 : 51414 51439 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 51414 ACAACGGUACUUUUCAGUGCCACCAA 51439 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #24668,sp|AL954861.11|AL954861 Zebrafish DNA sequence from clone CH211-8I17 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 643 : 164612 164587 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 10415 ACAACGGUACUUUUCAGUGCCACCAA 10440 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #25064,sp|X06128.1|APHISH1 Duck histone H1 gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 644 : 1557 1582 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 1557 CCAAAGGCUCUUUUAAGAGCCACCCA 1582 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #30758,sp|AY269259.1|AY269259 Gila elegans clone Gel_87 microsatellite sequence. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUAAGAGCCACCCA hit 645 : 202 227 (fwd) 38.29 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCCACC+A 202 ACAAAGGCUCUUUUAAGAGCCACCCA 227 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #31773,sp|BC041264.1|BC041264 Xenopus laevis, Similar to H2A histone family, member C, clone IMAGE:4885133, mRNA. ----isReversed: 0 ----hitSequence: CUAAAGGCCCUUUUAAGGGCCACUCC hit 646 : 479 504 (fwd) 29.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGC:CUUUU AG:GCCAC + 479 CUAAAGGCCCUUUUAAGGGCCACUCC 504 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #33542,sp|BC046078.1|BC046078 Danio rerio, clone MGC:56329 IMAGE:5603679, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUAAGGGCCACCCA hit 647 : 495 520 (fwd) 37.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCCACC+A 495 CCAAAGGCCCUUUUAAGGGCCACCCA 520 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36295,sp|BX000465.12|BX000465 Zebrafish DNA sequence from clone DKEY-30A6 in linkage group 22 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 648 : 187467 187442 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 27533 ACAACGGUACUUUUCAGUGCCACCAA 27558 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36300,sp|BX000471.7|BX000471 Zebrafish DNA sequence from clone DKEY-11C8 in linkage group 8 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 649 : 35706 35731 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 35706 ACAACGGUACUUUUCAGUGCCACCAA 35731 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36300,sp|BX000471.7|BX000471 Zebrafish DNA sequence from clone DKEY-11C8 in linkage group 8 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 650 : 81224 81199 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 146669 ACAACGGUACUUUUCAGUGCCACCAA 146694 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36305,sp|BX000485.4|BX000485 Zebrafish DNA sequence from clone CH211-142G3 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 651 : 113163 113138 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 46681 ACAACGGUACUUUUCAGUGCCACCAA 46706 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36312,sp|BX000705.13|BX000705 Zebrafish DNA sequence from clone DKEY-76D18 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 652 : 59200 59225 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 59200 CCAACGGUACUUUUCAGUGCCACCAA 59225 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36312,sp|BX000705.13|BX000705 Zebrafish DNA sequence from clone DKEY-76D18 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 653 : 109328 109303 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 146452 CCAACGGUACUUUUCAGUGCCACCAA 146477 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36324,sp|BX001018.11|BX001018 Zebrafish DNA sequence from clone DKEY-11D22 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 654 : 31285 31260 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 175653 ACAACGGUACUUUUCAGUGCCACCAA 175678 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36343,sp|BX004771.5|BX004771 Zebrafish DNA sequence from clone CH211-112I15 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 655 : 146818 146843 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 146818 ACAACGGUACUUUUCAGUGCCACCAA 146843 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36343,sp|BX004771.5|BX004771 Zebrafish DNA sequence from clone CH211-112I15 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 656 : 43488 43463 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 123765 CCAACGGUACUUUUCAGUGCCACCAA 123790 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36369,sp|BX004840.8|BX004840 Zebrafish DNA sequence from clone DKEY-19A16 in linkage group 22 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 657 : 691 716 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 691 CCAACGGUACUUUUCAGUGCCACCAA 716 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36371,sp|BX004853.7|BX004853 Zebrafish DNA sequence from clone DKEY-13O11 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 658 : 178061 178086 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 178061 ACAACGGUACUUUUCAGUGCCACCAA 178086 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36403,sp|BX005008.11|BX005008 Zebrafish DNA sequence from clone DKEY-29K15 in linkage group 14 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 659 : 105270 105245 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 102571 ACAACGGUACUUUUCAGUGCCACCAA 102596 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36412,sp|BX005029.13|BX005029 Zebrafish DNA sequence from clone CH211-182D3 in linkage group 5 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 660 : 128631 128606 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 318 ACAACGGUACUUUUCAGUGCCACCAA 343 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36427,sp|BX005067.6|BX005067 Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 661 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36427,sp|BX005067.6|BX005067 Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 662 : 110726 110751 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 110726 CCAACGGUACUUUUCAGUGCCACCAA 110751 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36427,sp|BX005067.6|BX005067 Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 663 : 95992 95967 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 66701 ACAACGGUACUUUUCAGUGCCACCAA 66726 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36436,sp|BX005101.8|BX005101 Zebrafish DNA sequence from clone CH211-139G10 in linkage group 20 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 664 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36442,sp|BX005113.4|BX005113 Zebrafish DNA sequence from clone CH211-203B20 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 665 : 99640 99665 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 99640 ACAACGGUACUUUUCAGUGCCACCAA 99665 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36442,sp|BX005113.4|BX005113 Zebrafish DNA sequence from clone CH211-203B20 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 666 : 127181 127206 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 127181 CCAACGGUACUUUUCAGUGCCACCAA 127206 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36442,sp|BX005113.4|BX005113 Zebrafish DNA sequence from clone CH211-203B20 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 667 : 44702 44677 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 147084 CCAACGGUACUUUUCAGUGCCACCAA 147109 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36445,sp|BX005125.10|BX005125 Zebrafish DNA sequence from clone CH211-127I16 in linkage group 10 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 668 : 18100 18125 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 18100 ACAACGGUACUUUUCAGUGCCACCAA 18125 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36447,sp|BX005134.5|BX005134 Zebrafish DNA sequence from clone CH211-162G1 in linkage group 12 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 669 : 91014 90989 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 41421 ACAACGGUACUUUUCAGUGCCACCAA 41446 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36466,sp|BX005250.7|BX005250 Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACGAA hit 670 : 278409 278384 (rev) 25.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCAC AA 3019 CCAACGGUACUUUUCAGUGCCACGAA 3044 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36466,sp|BX005250.7|BX005250 Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 671 : 80428 80403 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 201000 ACAACGGUACUUUUCAGUGCCACCAA 201025 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36468,sp|BX005256.11|BX005256 Zebrafish DNA sequence from clone DKEY-79D12 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 672 : 106642 106617 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 92827 ACAACGGUACUUUUCAGUGCCACCAA 92852 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36473,sp|BX005269.4|BX005269 Zebrafish DNA sequence from clone CH211-160L17 in linkage group 2 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 673 : 93036 93061 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 93036 ACAACGGUACUUUUCAGUGCCACCAA 93061 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36484,sp|BX005315.6|BX005315 Zebrafish DNA sequence from clone DKEY-79E6 ----isReversed: 1 ----hitSequence: ACAAUGGUACUUUUCAGUGCCACCAA hit 674 : 14384 14359 (rev) 25.80 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA GG: CUUUUCAG :CCACCAA 116520 ACAAUGGUACUUUUCAGUGCCACCAA 116545 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36486,sp|BX005319.6|BX005319 Zebrafish DNA sequence from clone DKEY-10F23 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 675 : 199829 199804 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 25811 ACAACGGUACUUUUCAGUGCCACCAA 25836 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36510,sp|BX005419.6|BX005419 Zebrafish DNA sequence from clone DKEY-199L1 in linkage group 5 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 676 : 91014 90989 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 88491 ACAACGGUACUUUUCAGUGCCACCAA 88516 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36513,sp|BX005449.4|BX005449 Zebrafish DNA sequence from clone CH211-174A15 in linkage group 10 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 677 : 323 348 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 323 ACAACGGUACUUUUCAGUGCCACCAA 348 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36519,sp|BX072555.13|BX072555 Zebrafish DNA sequence from clone DKEY-30O19 in linkage group 22 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 678 : 200762 200787 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 200762 ACAACGGUACUUUUCAGUGCCACCAA 200787 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36523,sp|BX072571.8|BX072571 Zebrafish DNA sequence from clone DKEY-238F24 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 679 : 114401 114426 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 114401 ACAACGGUACUUUUCAGUGCCACCAA 114426 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36528,sp|BX088533.9|BX088533 Zebrafish DNA sequence from clone DKEY-24B15 in linkage group 1 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 680 : 10211 10236 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 10211 CCAACGGUACUUUUCAGUGCCACCAA 10236 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36541,sp|BX088690.8|BX088690 Zebrafish DNA sequence from clone CH211-211A20 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 681 : 129905 129880 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 88689 ACAACGGUACUUUUCAGUGCCACCAA 88714 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36547,sp|BX088726.13|BX088726 Zebrafish DNA sequence from clone DKEY-149G13 in linkage group 20 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 682 : 3346 3321 (rev) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 187029 CCAACGGUACUUUUCAGUGCCACCAA 187054 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36552,sp|BX119975.6|BX119975 Zebrafish DNA sequence from clone CH211-200A16 in linkage group 8 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 683 : 55012 54987 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 99797 ACAACGGUACUUUUCAGUGCCACCAA 99822 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36563,sp|BX248104.5|BX248104 Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20 ----isReversed: 0 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 684 : 2515 2540 (fwd) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 2515 ACAACGGUACUUUUCAGUGCCACCAA 2540 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36572,sp|BX248320.2|BX248320 Zebrafish DNA sequence from clone CH211-146A1 in linkage group 18 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 685 : 19094 19069 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 73061 ACAACGGUACUUUUCAGUGCCACCAA 73086 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36600,sp|BX255949.3|BX255949 Zebrafish DNA sequence from clone DKEY-76F5 in linkage group 2 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 686 : 73040 73015 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 141445 ACAACGGUACUUUUCAGUGCCACCAA 141470 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36603,sp|BX276097.12|BX276097 Zebrafish DNA sequence from clone DKEY-97C6 in linkage group 20 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 687 : 29321 29296 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 99551 ACAACGGUACUUUUCAGUGCCACCAA 99576 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36607,sp|BX276177.6|BX276177 Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20 ----isReversed: 1 ----hitSequence: CCAAAGGUACUUUUCAGUGCCACCAA hit 688 : 7604 7579 (rev) 30.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG: CUUUUCAG :CCACCAA 194737 CCAAAGGUACUUUUCAGUGCCACCAA 194762 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36613,sp|BX284666.7|BX284666 Zebrafish DNA sequence from clone CH211-190K17 in linkage group 22 ----isReversed: 0 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAA hit 689 : 123470 123495 (fwd) 30.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCAA 123470 CCAACGGUACUUUUCAGUGCCACCAA 123495 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36644,sp|BX322614.3|BX322614 Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 690 : 162891 162866 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 36893 ACAACGGUACUUUUCAGUGCCACCAA 36918 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36645,sp|BX322618.8|BX322618 Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20 ----isReversed: 1 ----hitSequence: CCAACGGUACUUUUCAGUGCCACCAU hit 691 : 39242 39217 (rev) 28.33 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GG: CUUUUCAG :CCACCA 104970 CCAACGGUACUUUUCAGUGCCACCAU 104995 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #36685,sp|BX511038.6|BX511038 Zebrafish DNA sequence from clone CH211-168I8 in linkage group 4 ----isReversed: 1 ----hitSequence: ACAACGGUACUUUUCAGUGCCACCAA hit 692 : 16109 16084 (rev) 30.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GG: CUUUUCAG :CCACCAA 42529 ACAACGGUACUUUUCAGUGCCACCAA 42554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37539,sp|X14730.1|CMHIST2A Duck H2A histone gene. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUUAGAGCCACCCA hit 693 : 572 597 (fwd) 37.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCCACC+A 572 ACAAAGGCUCUUUUUAGAGCCACCCA 597 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37540,sp|X14731.1|CMHIST2B Duck H2B histone gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAA hit 694 : 1084 1109 (fwd) 40.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCAA 1084 CCAAAGGCUCUUUUCAGAGCCACCAA 1109 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37541,sp|X14732.1|CMHIST34 Duck H3 and H4 histone genes ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 695 : 465 490 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 465 ACAAAGGCUCUUUUCAGAGCCACCCA 490 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37541,sp|X14732.1|CMHIST34 Duck H3 and H4 histone genes ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAC hit 696 : 3272 3297 (fwd) 37.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 3272 CCAAAGGCUCUUUUAAGAGCCACCAC 3297 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37541,sp|X14732.1|CMHIST34 Duck H3 and H4 histone genes ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 697 : 4253 4228 (rev) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 465 ACAAAGGCUCUUUUCAGAGCCACCCA 490 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37541,sp|X14732.1|CMHIST34 Duck H3 and H4 histone genes ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAC hit 698 : 1449 1424 (rev) 37.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 3269 CCAAAGGCUCUUUUAAGAGCCACCAC 3294 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #37723,sp|D70896.1|D70896 Gallus gallus DNA for histone H2B, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 699 : 507 532 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 507 CCAAAGGCUCUUUUCAGAGCCACCCA 532 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #39265,sp|M57901.1|GDH2BB Chicken histone H2B gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 700 : 829 854 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 829 CCAAAGGCUCUUUUCAGAGCCACCCA 854 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41019,sp|M17021.1|GGH103 Chicken H1 histone gene lambda-Ch03 H1 (03 H1), complete cds with promoters. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGGCCACCCA hit 701 : 982 1008 (fwd) 29.64 bits :::::<<<<<<____>>>.>>>::::: 1 aCAAAGGCuCUUUUCAGa.GCCACCAA 26 +CAA+GGCUCUUUU AGA GCCACC+A 982 CCAACGGCUCUUUUAAGAgGCCACCCA 1008 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41020,sp|J00863.1|GGH11A1 Chicken histone H1 gene, clone pch1ab1bk1. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 702 : 904 929 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 904 CCAAAGGCUCUUUUAAGAGCCACCCA 929 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41021,sp|M17018.1|GGH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1), complete cds and promoters. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCCA hit 703 : 936 961 (fwd) 38.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC+A 936 CCAACGGCUCUUUUAAGAGCCACCCA 961 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41022,sp|M17019.1|GGH1PL Chicken H1 histone gene pCH11.5E left (11L H1), complete cds with promoters. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCCA hit 704 : 1172 1197 (fwd) 38.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC+A 1172 CCAACGGCUCUUUUAAGAGCCACCCA 1197 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41023,sp|M17020.1|GGH1PR Chicken H1 histone gene pCH11.5E right (11R H1), complete cds with promoters. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGGCCACCCA hit 705 : 1052 1078 (fwd) 29.64 bits :::::<<<<<<____>>>.>>>::::: 1 aCAAAGGCuCUUUUCAGa.GCCACCAA 26 +CAA+GGCUCUUUU AGA GCCACC+A 1052 CCAACGGCUCUUUUAAGAgGCCACCCA 1078 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41024,sp|J00864.1|GGH2A2B Chicken histone H2A/H2B gene pair and flanks. ----isReversed: 1 ----hitSequence: UCCAAAGCUCUUUUCAGAGCCACCCA hit 706 : 222 197 (rev) 29.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 C AA:GCUCUUUUCAGAGC:ACC+A 1343 UCCAAAGCUCUUUUCAGAGCCACCCA 1368 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41025,sp|D11054.1|GGH2A3H Gallus gallus gene for H2A histone, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 707 : 772 797 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 772 CCAAAGGCUCUUUUCAGAGCCACCCA 797 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41025,sp|D11054.1|GGH2A3H Gallus gallus gene for H2A histone, complete cds. ----isReversed: 1 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCCA hit 708 : 1361 1336 (rev) 38.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC+A 135 CCAACGGCUCUUUUAAGAGCCACCCA 160 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41026,sp|D11055.1|GGH2A4H Gallus gallus gene for H2A histone, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAA hit 709 : 750 775 (fwd) 40.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCAA 750 CCAAAGGCUCUUUUCAGAGCCACCAA 775 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41028,sp|X07766.1|GGH2AB11 Chicken DNA for CH1-10 histone H2A/H2B sequence ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGGCCACCCA hit 710 : 1028 1054 (fwd) 31.16 bits :::::<<<<<<____>>>.>>>::::: 1 aCAAAGGCuCUUUUCAGa.GCCACCAA 26 +CAAAGGCUCUUUUCAGA GCCACC+A 1028 CCAAAGGCUCUUUUCAGAgGCCACCCA 1054 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41034,sp|V00413.1|GGH2AX Chicken gene for histone H2A with flanking regions. ----isReversed: 0 ----hitSequence: UCCAAAGCUCUUUUCAGAGCCACCCA hit 711 : 757 782 (fwd) 29.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 C AA:GCUCUUUUCAGAGC:ACC+A 757 UCCAAAGCUCUUUUCAGAGCCACCCA 782 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41035,sp|J00865.1|GGH2B Chicken histone H2B gene and flanks. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAU hit 712 : 529 554 (fwd) 37.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 529 CCAAAGGCUCUUUUCAGAGCCACCAU 554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41036,sp|X05094.1|GGH2B1 Chicken histone H2B gene (pKR1a-1.3) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAU hit 713 : 1227 1252 (fwd) 37.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 1227 CCAAAGGCUCUUUUCAGAGCCACCAU 1252 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41037,sp|X05095.1|GGH2B2 Chicken histone H2B gene (pRR2e-3.5) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 714 : 642 667 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 642 CCAAAGGCUCUUUUCAGAGCCACCCA 667 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41038,sp|X05096.1|GGH2B3 Chicken histone H2B gene (pRR3c-3.5) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 715 : 633 658 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 633 CCAAAGGCUCUUUUCAGAGCCACCCA 658 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41039,sp|X05097.1|GGH2B4 Chicken histone H2B gene (pPP2d-2.3) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCGGAGCCACCCA hit 716 : 632 657 (fwd) 33.48 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUC UUUC GAGCCACC+A 632 CCAAAGGCUCUUUUCGGAGCCACCCA 657 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41040,sp|X57263.1|GGH2B4G Chicken gene for histone H2B-IV. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 717 : 640 665 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 640 CCAAAGGCUCUUUUCAGAGCCACCCA 665 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41041,sp|X05098.1|GGH2B5 Chicken histone H2B gene (pBBA-3.0) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 718 : 632 657 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 632 CCAAAGGCUCUUUUCAGAGCCACCCA 657 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41043,sp|X05100.1|GGH2B7 Chicken histone H2B gene (pPP2d-4.0) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUUCA hit 719 : 301 326 (fwd) 31.82 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA +A 301 CCAAAGGCUCUUUUCAGAGCCAUUCA 326 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41049,sp|M61155.1|GGH3AB Chicken histone H3 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAC hit 720 : 597 622 (fwd) 37.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 597 CCAAAGGCUCUUUUAAGAGCCACCAC 622 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41050,sp|J00866.1|GGH43D8 Chicken histone H4 gene, clone pch3dr8. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGCCCA hit 721 : 625 650 (fwd) 33.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+A 625 CCAAAGGCUCUUUUCAGAGCCGCCCA 650 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41075,sp|V00415.1|GGHI02 Gallus gallus gene coding for histone H2b. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCGGAGCCACCAU hit 722 : 601 626 (fwd) 31.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUC UUUC GAGCCACCA 601 CCAAAGGCUCUUUUCGGAGCCACCAU 626 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41078,sp|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGCCCA hit 723 : 1142 1167 (fwd) 33.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+A 1142 CCAAAGGCUCUUUUCAGAGCCGCCCA 1167 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41078,sp|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 724 : 5361 5386 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 5361 CCAAAGGCUCUUUUCAGAGCCACCCA 5386 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41078,sp|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGCCCA hit 725 : 6310 6285 (rev) 33.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+A 2075 CCAAAGGCUCUUUUCAGAGCCGCCCA 2100 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41078,sp|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUAAGAGCCACUCC hit 726 : 3294 3269 (rev) 34.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUU AGAGCCAC + 5091 CAAAAGGCUCUUUUAAGAGCCACUCC 5116 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41078,sp|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 727 : 2083 2058 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 6302 CCAAAGGCUCUUUUCAGAGCCACCCA 6327 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41079,sp|X01752.1|GGHISH1 Chicken histone H1 gene ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCCA hit 728 : 1357 1382 (fwd) 38.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC+A 1357 CCAACGGCUCUUUUAAGAGCCACCCA 1382 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41081,sp|X62291.1|GGHISH3IV G.gallus gene for histone H3-IV ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUCC hit 729 : 851 876 (fwd) 34.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC + 851 CCAAAGGCUCUUUUAAGAGCCACUCC 876 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41082,sp|X62292.1|GGHISH3V G.gallus gene for histone H3-V ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUCC hit 730 : 851 876 (fwd) 34.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC + 851 CCAAAGGCUCUUUUAAGAGCCACUCC 876 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41084,sp|M74533.1|GGHIST4A Chicken histone H4 protein gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 731 : 491 516 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 491 CCAAAGGCUCUUUUCAGAGCCACCCA 516 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #41085,sp|M74534.1|GGHIST4B Chicken histone H4 protein gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 732 : 508 533 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 508 CCAAAGGCUCUUUUCAGAGCCACCCA 533 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42577,sp|U37575.1|GGU37575 Gallus gallus histones H4-VI, H2B-VII and H4-VII genes, complete cds. ----isReversed: 0 ----hitSequence: ACCAAGGCUCUUUUCAGAGCCACCCA hit 733 : 544 569 (fwd) 36.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AAGGCUCUUUUCAGAGCCACC+A 544 ACCAAGGCUCUUUUCAGAGCCACCCA 569 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42577,sp|U37575.1|GGU37575 Gallus gallus histones H4-VI, H2B-VII and H4-VII genes, complete cds. ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUCAGAGCCCCCAA hit 734 : 1468 1493 (fwd) 37.70 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUUCAGAGCC CCAA 1468 CAAACGGCUCUUUUCAGAGCCCCCAA 1493 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42577,sp|U37575.1|GGU37575 Gallus gallus histones H4-VI, H2B-VII and H4-VII genes, complete cds. ----isReversed: 1 ----hitSequence: ACCAAGGCUCUUUUCAGAGCCACCCA hit 735 : 1656 1631 (rev) 36.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AAGGCUCUUUUCAGAGCCACC+A 642 ACCAAGGCUCUUUUCAGAGCCACCCA 667 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42578,sp|U37576.1|GGU37576 Gallus gallus histone H4-VIII gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCACCCA hit 736 : 709 734 (fwd) 36.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCCACC+A 709 CCAAAGGCUCUUCUCAGAGCCACCCA 734 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42579,sp|U37577.1|GGU37577 Gallus gallus histone H3-VI gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUCC hit 737 : 751 776 (fwd) 34.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC + 751 CCAAAGGCUCUUUUAAGAGCCACUCC 776 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42580,sp|U37578.1|GGU37578 Gallus gallus histone H3-VII gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCGCCAC hit 738 : 934 959 (fwd) 31.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCC CCA 934 CCAAAGGCUCUUUUAAGAGCCGCCAC 959 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42581,sp|U37579.1|GGU37579 Gallus gallus histone H3-VIII gene, complete cds. ----isReversed: 0 ----hitSequence: CUAAAGGCUCUUUUAAGAGCCACCAC hit 739 : 918 943 (fwd) 32.38 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGCUCUUUU AGAGCCACCA 918 CUAAAGGCUCUUUUAAGAGCCACCAC 943 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42583,sp|U38931.1|GGU38931 Gallus gallus histone H2A (H2A-VI) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 740 : 445 470 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 445 CCAAAGGCUCUUUUCAGAGCCACCCA 470 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42584,sp|U38932.1|GGU38932 Gallus gallus histone H2A (H2A-VII) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 741 : 583 608 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 583 CCAAAGGCUCUUUUCAGAGCCACCCA 608 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42585,sp|U38933.1|GGU38933 Gallus gallus histone H2A (H2A-VIII) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 742 : 588 613 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 588 CCAAAGGCUCUUUUCAGAGCCACCCA 613 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #42586,sp|U38934.1|GGU38934 Gallus gallus histone H2A (H2A-IX) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 743 : 455 480 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 455 CCAAAGGCUCUUUUCAGAGCCACCCA 480 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #45654,sp|X67308.1|ONHH3PRO O.nerka DNA for histone H3 promoter ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 744 : 41 66 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 41 CCAAAGGCUCUUUUAAGAGCCAACCA 66 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47324,sp|S69089.1|S69089 H1A=somatic H1 histone [Xenopus laevis, Genomic, 1022 nt]. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAC hit 745 : 789 814 (fwd) 37.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 789 CCAAAGGCUCUUUUAAGAGCCACCAC 814 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47994,sp|X02916.1|SGH4H2B Rainbow trout histone H4 and H2B genes ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 746 : 1188 1213 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 1188 CCAAAGGCUCUUUUAAGAGCCACCCA 1213 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47994,sp|X02916.1|SGH4H2B Rainbow trout histone H4 and H2B genes ----isReversed: 0 ----hitSequence: CCCAAGGCUCUUUUAAGAGCCACCCA hit 747 : 2142 2167 (fwd) 35.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +C AAGGCUCUUUU AGAGCCACC+A 2142 CCCAAGGCUCUUUUAAGAGCCACCCA 2167 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47995,sp|X02624.1|SGHIS1 Salmo gairdnerii H1 histone gene ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUAAGAGCCACCCA hit 748 : 1212 1237 (fwd) 38.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUU AGAGCCACC+A 1212 CAAAAGGCUCUUUUAAGAGCCACCCA 1237 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47996,sp|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 749 : 787 812 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 787 CCAAAGGCUCUUUUAAGAGCCAACCA 812 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #47996,sp|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCUC hit 750 : 1664 1689 (fwd) 34.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC 1664 CCAAAGGCUCUUUUAAGAGCCACCUC 1689 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #48464,sp|Z30244.1|SSHIST3 S.salar histone H3 gene (promoter region) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 751 : 41 66 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 41 CCAAAGGCUCUUUUAAGAGCCAACCA 66 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #48645,sp|Z30266.1|STHIST3 S.trutta histone H3 gene (promoter region) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAACCA hit 752 : 41 66 (fwd) 35.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA C+A 41 CCAAAGGCUCUUUUAAGAGCCAACCA 66 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #48967,sp|X54078.1|TNHISTH4 T.nilotica gene for histone H4 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUAAGAGCCACACA hit 753 : 371 396 (fwd) 36.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUU AGAGCCAC +A 371 CAAACGGCUCUUUUAAGAGCCACACA 396 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51139,sp|J00968.1|XLH1C2 xenopus laevis h1 histone gene, h1c subtype, clone xlhw2. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCAC hit 754 : 945 970 (fwd) 37.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 945 UCAAAGGCUCUUUUCAGAGCCACCAC 970 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51140,sp|J00969.1|XLH1C8 xenopus laevis h1 histone gene, h1c subtype, clone xlhw8. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCAC hit 755 : 957 982 (fwd) 37.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 957 UCAAAGGCUCUUUUCAGAGCCACCAC 982 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51141,sp|X72929.1|XLH1CG X.laevis H1C gene for linker histone H1C ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCAC hit 756 : 1233 1258 (fwd) 37.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 1233 UCAAAGGCUCUUUUCAGAGCCACCAC 1258 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51143,sp|J00970.1|XLH1PS1 xenopus laevis h1 histone pseudogene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAC hit 757 : 718 743 (fwd) 37.51 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCA 718 CCAAAGGCUCUUUUAAGAGCCACCAC 743 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51145,sp|X71389.1|XLH2BA X.laevis H2B gene for histone H2B ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUCUAAGAGCCCCCAU hit 758 : 882 907 (fwd) 30.83 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUU U AGAGCC CCA 882 ACAAAGGCUCUUCUAAGAGCCCCCAU 907 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51146,sp|X71390.1|XLH2BB X.laevis H2B and H2A genes for histones H2B and H2A ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUCUAAGAGUCCCCAU hit 759 : 1166 1191 (fwd) 25.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAG CUCUU U AGAG C CCA 1166 ACAAAGGCUCUUCUAAGAGUCCCCAU 1191 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51147,sp|X72949.1|XLH3HIS X.laevis H3r gene for histone H3 ----isReversed: 0 ----hitSequence: ACAAAGGUUCUUUUCAGAGCCACUAA hit 760 : 784 809 (fwd) 34.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG:UCUUUUCAGA:CCAC AA 784 ACAAAGGUUCUUUUCAGAGCCACUAA 809 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51148,sp|X72950.1|XLH3LHIS X.laevis H3l gene for histone H3 ----isReversed: 0 ----hitSequence: ACAAAGGUUCUUUUCAGAGCCACUAA hit 761 : 815 840 (fwd) 34.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG:UCUUUUCAGA:CCAC AA 815 ACAAAGGUUCUUUUCAGAGCCACUAA 840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51181,sp|J00980.1|XLHIS2AL xenopus laevis h2a histone gene & flanks. ----isReversed: 0 ----hitSequence: ACAAGGGCUCUUUUCAGAGCCGCCAC hit 762 : 585 610 (fwd) 28.00 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA GGCUCUUUUCAGAGCC CCA 585 ACAAGGGCUCUUUUCAGAGCCGCCAC 610 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51182,sp|J00981.1|XLHIS2BL xenopus laevis h2b histone gene & flanks. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 763 : 549 574 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 549 ACAAAGGCUCUUUUCAGAGCCACCCA 574 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51185,sp|J00984.1|XLHIS3LB x.laevis histone gene h3 and flanks. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACAAC hit 764 : 435 460 (fwd) 35.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC A 435 UCAAAGGCUCUUUUCAGAGCCACAAC 460 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51186,sp|X00224.1|XLHIS4 Xenopus laevis H4 histone gene and flanking regions ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCA hit 765 : 747 772 (fwd) 37.15 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+A 747 CCAAAGGCUCUUUUCAGAGCCCCCCA 772 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51187,sp|J00985.1|XLHIS4B Xenopus borealis h4 histone mRNA. ----isReversed: 0 ----hitSequence: ACAACGGCCCUUUUAAGGGCCACAAA hit 766 : 345 370 (fwd) 37.02 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGC:CUUUU AG:GCCAC AA 345 ACAACGGCCCUUUUAAGGGCCACAAA 370 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51188,sp|J00986.1|XLHIS4L xenopus laevis h4 histone mrna. ----isReversed: 0 ----hitSequence: AAAACGGCCCUUUUAAGGGCCACCAA hit 767 : 329 354 (fwd) 38.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AA+GGC:CUUUU AG:GCCACCAA 329 AAAACGGCCCUUUUAAGGGCCACCAA 354 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51189,sp|J00987.1|XLHIS4LB x.laevis histone gene h4 and flanks. ----isReversed: 0 ----hitSequence: CCCAAGGCUCUUUUCAGAGCCCCCCA hit 768 : 339 364 (fwd) 34.43 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +C AAGGCUCUUUUCAGAGCC CC+A 339 CCCAAGGCUCUUUUCAGAGCCCCCCA 364 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: CAACAGGCUCUUUUAAGAGCCACCAA hit 769 : 258 283 (fwd) 35.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A AGGCUCUUUU AGAGCCACCAA 258 CAACAGGCUCUUUUAAGAGCCACCAA 283 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 770 : 1761 1786 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 1761 UCAAAGGCUCUUUUCAGAGCCACCCA 1786 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUAAGAGCCCCCAC hit 771 : 3532 3557 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCC CCA 3532 ACAAAGGCUCUUUUAAGAGCCCCCAC 3557 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAC hit 772 : 11591 11616 (fwd) 38.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 11591 CCAAAGGCUCUUUUCAGAGCCACCAC 11616 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAA hit 773 : 13164 13189 (fwd) 40.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCAA 13164 ACAAAGGCUCUUUUCAGAGCCACCAA 13189 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 774 : 14629 14654 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 14629 CCAAAGGCUCUUUUCAGAGCCACCCA 14654 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51194,sp|X03017.1|XLHISH1 Xenopus laevis histone gene cluster Xlh1 with genes H3, H4, H2B, H2A and H1B ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 775 : 2324 2299 (rev) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 12619 ACAAAGGCUCUUUUCAGAGCCACCCA 12644 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51196,sp|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 ----isReversed: 0 ----hitSequence: ACCAAGGCUCUUUUAAGAGCCACCAC hit 776 : 1285 1310 (fwd) 34.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AAGGCUCUUUU AGAGCCACCA 1285 ACCAAGGCUCUUUUAAGAGCCACCAC 1310 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51196,sp|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 777 : 2107 2132 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 2107 CCAAAGGCUCUUUUCAGAGCCACCCA 2132 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51196,sp|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 778 : 4804 4829 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 4804 CCAAAGGCUCUUUUCAGAGCCACCCA 4829 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51196,sp|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 ----isReversed: 0 ----hitSequence: AUAACGGCCCUUUUAAGGGCCACCCA hit 779 : 7299 7324 (fwd) 32.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGC:CUUUU AG:GCCACC+A 7299 AUAACGGCCCUUUUAAGGGCCACCCA 7324 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51196,sp|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUUUCAGAGCCACCAA hit 780 : 5509 5482 (rev) 31.01 bits :::::<<<<<<_..___>>>>>>::::: 1 aCAAAGGCuCUU..UUCAGaGCCACCAA 26 ++AAAGGCUCUU UUCAGAGCCACCAA 3084 CAAAAGGCUCUUuuUUCAGAGCCACCAA 3111 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51197,sp|X03104.1|XLHISH3G Xenopus laevis gene for histone H3 (clone XLHW23) ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAA hit 781 : 680 705 (fwd) 40.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCAA 680 ACAAAGGCUCUUUUCAGAGCCACCAA 705 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: CAACAGGCUCUUUUAAGAGCCACCAA hit 782 : 265 290 (fwd) 35.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++A AGGCUCUUUU AGAGCCACCAA 265 CAACAGGCUCUUUUAAGAGCCACCAA 290 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACCCA hit 783 : 1768 1793 (fwd) 37.90 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC+A 1768 UCAAAGGCUCUUUUCAGAGCCACCCA 1793 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUAAGAGCCCCCAC hit 784 : 3539 3564 (fwd) 35.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUU AGAGCC CCA 3539 ACAAAGGCUCUUUUAAGAGCCCCCAC 3564 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAC hit 785 : 11598 11623 (fwd) 38.88 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCA 11598 CCAAAGGCUCUUUUCAGAGCCACCAC 11623 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCAA hit 786 : 13171 13196 (fwd) 40.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACCAA 13171 ACAAAGGCUCUUUUCAGAGCCACCAA 13196 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 787 : 14636 14661 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 14636 CCAAAGGCUCUUUUCAGAGCCACCCA 14661 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51242,sp|M21286.1|XLHX1H1 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster Xlhl. ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 788 : 2331 2306 (rev) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 12619 ACAAAGGCUCUUUUCAGAGCCACCCA 12644 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51243,sp|M21287.1|XLHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3. ----isReversed: 0 ----hitSequence: ACCAAGGCUCUUUUAAGAGCCACCAC hit 789 : 1295 1320 (fwd) 34.91 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 AC AAGGCUCUUUU AGAGCCACCA 1295 ACCAAGGCUCUUUUAAGAGCCACCAC 1320 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51243,sp|M21287.1|XLHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 790 : 2117 2142 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 2117 CCAAAGGCUCUUUUCAGAGCCACCCA 2142 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51243,sp|M21287.1|XLHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 791 : 4821 4846 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 4821 CCAAAGGCUCUUUUCAGAGCCACCCA 4846 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51243,sp|M21287.1|XLHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3. ----isReversed: 0 ----hitSequence: AUAACGGCCCUUUUAAGGGCCACCCA hit 792 : 7315 7340 (fwd) 32.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AA+GGC:CUUUU AG:GCCACC+A 7315 AUAACGGCCCUUUUAAGGGCCACCCA 7340 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51243,sp|M21287.1|XLHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3. ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUUUCAGAGCCACCAA hit 793 : 5526 5499 (rev) 31.01 bits :::::<<<<<<_..___>>>>>>::::: 1 aCAAAGGCuCUU..UUCAGaGCCACCAA 26 ++AAAGGCUCUU UUCAGAGCCACCAA 3083 CAAAAGGCUCUUuuUUCAGAGCCACCAA 3110 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51522,sp|J00991.1|XLLHIS3 xenopus laevis h3 histone mrna. ----isReversed: 0 ----hitSequence: ACAAAGGUUCUUUUCAGAGCCACUAA hit 794 : 51 76 (fwd) 34.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG:UCUUUUCAGA:CCAC AA 51 ACAAAGGUUCUUUUCAGAGCCACUAA 76 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/vrt.dat.fasta.gz ----sequence: #51554,sp|M23777.1|XLMHIS4A2 X.laevis histone H4-1 gene, 3' end. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGCCCA hit 795 : 73 98 (fwd) 33.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+A 73 CCAAAGGCUCUUUUCAGAGCCGCCCA 98 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum01.dat.fasta.gz ----sequence: #9523,sp|AC002498.1|AC002498 Human Cosmid g5129g124 from 7q31.3, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGUCAUCAU hit 796 : 29200 29225 (fwd) 26.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAG CUCUUUUCAGAG CA CA 29200 CCAAAGGCUCUUUUCAGAGUCAUCAU 29225 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #102,sp|AC004655.1|AC004655 Homo sapiens Xp22-140-141 BAC GSHB-128G5 (Genome Systems Human BAC library) complete sequence. ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACUUA hit 797 : 36388 36413 (fwd) 32.35 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC A 36388 GCAAAGGCUCUUUUCAGAGCCACUUA 36413 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #186,sp|AC004790.1|AC004790 Homo sapiens chromosome 19, cosmid F17987, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCUGAGCCAUCAU hit 798 : 6215 6240 (fwd) 25.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUC UUUC GAGCCA CA 6215 CCAAAGGCUCUUUUCUGAGCCAUCAU 6240 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1270,sp|AC006358.6|AC006358 Homo sapiens chromosome 7 clone RP5-1127D14, complete sequence. ----isReversed: 1 ----hitSequence: AAACAGGGUCUUUUCAGAUCAACCAA hit 799 : 88175 88150 (rev) 25.16 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+A A G UCUUUUCAGA C ACCAA 55042 AAACAGGGUCUUUUCAGAUCAACCAA 55067 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1299,sp|AC006387.3|AC006387 Homo sapiens BAC clone CTA-360L10 from 7, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUUAGAGCCAAUCA hit 800 : 92783 92758 (rev) 32.60 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA +A 45982 CCAAAGGCUCUUUUUAGAGCCAAUCA 46007 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #1740,sp|AC007464.4|AC007464 Homo sapiens BAC clone RP11-542B5 from 2, complete sequence. ----isReversed: 0 ----hitSequence: GAAAAGGCUGUUUUUAUAGCCCCAAA hit 801 : 60948 60973 (fwd) 24.92 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGCU UUUU A AGCC C AA 60948 GAAAAGGCUGUUUUUAUAGCCCCAAA 60973 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #3098,sp|AC010168.6|AC010168 Homo sapiens 12p12-31.7-32.2 BAC RP11-174G6 (Rosewell Park Cancer Institute Human Bac Library) complete sequence. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCCCCAA hit 802 : 20430 20455 (fwd) 37.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCC CCAA 20430 CAAAAGGCCCUUUUCAGGGCCCCCAA 20455 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #3528,sp|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 803 : 137365 137340 (rev) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 15235 CCAAAGGCUCUUUUCAGAGCCAUCAU 15260 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4208,sp|AC012593.8|AC012593 Homo sapiens BAC clone RP11-511B24 from 2, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAUCAU hit 804 : 157905 157880 (rev) 30.68 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA CA 8170 CCAAAGGCUCUUUUAAGAGCCAUCAU 8195 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #4326,sp|AC013448.7|AC013448 Homo sapiens BAC clone RP11-551D18 from 2, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUGAAGAGCCAUCAC hit 805 : 31728 31703 (rev) 25.52 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUU AGAGCCA CA 97826 CCAAAGGCUCUUUGAAGAGCCAUCAC 97851 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6261,sp|AC024301.10|AC024301 Homo sapiens, clone RP11-686O16, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCCU hit 806 : 138832 138857 (fwd) 31.26 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+ 138832 CCAAAGGCUCUUUUCAGAGCCAUCCU 138857 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #6636,sp|AC026130.15|AC026130 Homo sapiens chromosome 17, clone RP11-801J18, complete sequence. ----isReversed: 0 ----hitSequence: AAAAAGUCCUUUUUCAGGGACACACA hit 807 : 151187 151212 (fwd) 25.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAG:C::UUUUCA::G:CAC +A 151187 AAAAAGUCCUUUUUCAGGGACACACA 151212 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #7568,sp|AC067801.4|AC067801 Homo sapiens chromosome 18, clone RP11-583B12, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCCU hit 808 : 122432 122457 (fwd) 31.26 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+ 122432 CCAAAGGCUCUUUUCAGAGCCAUCCU 122457 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8418,sp|AC073913.23|AC073913 Homo sapiens 12 BAC RP11-955H22 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: AAAAAGCUUCUUUUCAGAAGCAUCCA hit 809 : 36295 36270 (rev) 24.76 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAG :UCUUUUCAGA: CA C+A 131871 AAAAAGCUUCUUUUCAGAAGCAUCCA 131896 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum02.dat.fasta.gz ----sequence: #8765,sp|AC079168.22|AC079168 Homo sapiens Xp BAC RP11-753E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 1 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACUUA hit 810 : 52583 52558 (rev) 32.35 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC A 98430 GCAAAGGCUCUUUUCAGAGCCACUUA 98455 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #1000,sp|AC092999.3|AC092999 Homo sapiens 3 BAC RP11-170K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAC hit 811 : 86701 86726 (fwd) 32.96 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 86701 CCAAAGGCUCUUUUCAGAGCCAUCAC 86726 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #2220,sp|AC098974.2|AC098974 Homo sapiens chromosome 3 clone RP11-320M6, complete sequence. ----isReversed: 0 ----hitSequence: AUAAAGGCUCUUUUCAGAGCCAUCAU hit 812 : 35426 35451 (fwd) 27.04 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAAGGCUCUUUUCAGAGCCA CA 35426 AUAAAGGCUCUUUUCAGAGCCAUCAU 35451 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #2449,sp|AC100794.2|AC100794 Homo sapiens chromosome 18, clone CTD-2559F21, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 813 : 89634 89609 (rev) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 53942 CCAAAGGCUCUUUUCAGAGCCAUCAU 53967 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #3427,sp|AC106748.3|AC106748 Homo sapiens chromosome 5 clone RP11-155G15, complete sequence. ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCCUCAU hit 814 : 65844 65869 (fwd) 26.23 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCC CA 65844 GCAAAGGCUCUUUUCAGAGCCCUCAU 65869 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4154,sp|AC109581.2|AC109581 Homo sapiens chromosome 3 clone RP11-168H3, complete sequence. ----isReversed: 1 ----hitSequence: UCCAAGGCCCUUCUCAGGCCCACCCA hit 815 : 83436 83411 (rev) 25.24 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 C AAGG :CUU UCAG: CCACC+A 71897 UCCAAGGCCCUUCUCAGGCCCACCCA 71922 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #4755,sp|AC114288.2|AC114288 Homo sapiens chromosome 5 clone CTD-2373J16, complete sequence. ----isReversed: 1 ----hitSequence: CCUAAGGCUCUUUUAAGAGCCAUCAU hit 816 : 14912 14887 (rev) 24.80 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +C AAGGCUCUUUU AGAGCCA CA 69359 CCUAAGGCUCUUUUAAGAGCCAUCAU 69384 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #5103,sp|AC116611.4|AC116611 Homo sapiens BAC clone RP13-581D7 from 4, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCGU hit 817 : 153926 153951 (fwd) 26.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C 153926 CCAAAGGCUCUUUUCAGAGCCAUCGU 153951 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum03.dat.fasta.gz ----sequence: #7130,sp|AE006464.1|AE006464 Homo sapiens 16p13.3 sequence section 3 of 8. ----isReversed: 0 ----hitSequence: CCAAAGACUCAUUUCAGAGCCAACAA hit 818 : 205278 205303 (fwd) 25.21 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAG:CUC UUUC GAG:CA CAA 205278 CCAAAGACUCAUUUCAGAGCCAACAA 205303 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum04.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum04.dat.fasta.gz ----sequence: #7061,sp|AF086564.1|AF086564 Homo sapiens full length insert cDNA clone ZE16D01. ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCCU hit 819 : 347 372 (fwd) 34.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC+ 347 UAAAAGGCCCUUUUCAGGGCCACCCU 372 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum05.dat.fasta.gz ----sequence: #1426,sp|AF119898.1|AF119898 Homo sapiens PRO2792 mRNA, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGUCUAUUUUAACAGCCACCAA hit 820 : 1104 1129 (fwd) 25.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAG:CU:UUUU A:AG:CACCAA 1104 UAAAAGUCUAUUUUAACAGCCACCAA 1129 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum06.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum06.dat.fasta.gz ----sequence: #7885,sp|AF334828.1|AF334828 Homo sapiens cartilage-hair hypoplasia region gene sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 821 : 43471 43446 (rev) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 40488 CCAAAGGCUCUUUUCAGAGCCAUCAU 40513 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #345,sp|AF397301.1|AF397301 Homo sapiens testis-specific histone H2B (STBP) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 822 : 750 775 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 750 CCAAAGGCUCUUUUCAGAGCCACUUA 775 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5760,sp|AF525682.1|AF525682 Homo sapiens histone H4 (HIST2H4) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 823 : 654 679 (fwd) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 654 CCAAAGGCCCUUUUUAGGGCCGACCA 679 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5904,sp|AF531274.1|AF531274 Homo sapiens histone H3 (HIST1H3A) gene, complete cds. ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCAC hit 824 : 848 873 (fwd) 35.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 848 GCAAAGGCUCUUUUCAGAGCCACCAC 873 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5905,sp|AF531275.1|AF531275 Homo sapiens histone H3 (HIST1H3B) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 825 : 853 878 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 853 CCAAAGGCUCUUUUCAGAGCCACCCA 878 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5906,sp|AF531276.1|AF531276 Homo sapiens histone H3 (HIST1H3C) gene, complete cds. ----isReversed: 0 ----hitSequence: GAAAAGGCUCUUUUCAGAGCCACUCA hit 826 : 844 869 (fwd) 34.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGCUCUUUUCAGAGCCAC +A 844 GAAAAGGCUCUUUUCAGAGCCACUCA 869 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5907,sp|AF531277.1|AF531277 Homo sapiens histone H3 (HIST1H3D) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 827 : 851 876 (fwd) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 851 CCAAAGGCUCUUUUCAGAGCCAACCA 876 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5908,sp|AF531278.1|AF531278 Homo sapiens histone H3 (HIST1H3E) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCAACCA hit 828 : 847 872 (fwd) 33.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCCA C+A 847 CCAAAGGCUCUUCUCAGAGCCAACCA 872 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5909,sp|AF531279.1|AF531279 Homo sapiens histone H3 (HIST1H3F) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAA hit 829 : 850 875 (fwd) 40.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCAA 850 CCAAAGGCUCUUUUCAGAGCCACCAA 875 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5910,sp|AF531280.1|AF531280 Homo sapiens histone H3 (HIST1H3G) gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCGCCUA hit 830 : 851 876 (fwd) 30.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCC CC A 851 AAAAAGGCUCUUUUAAGAGCCGCCUA 876 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5911,sp|AF531281.1|AF531281 Homo sapiens histone H3 (HIST1H3H) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 831 : 848 873 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 848 CCAAAGGCUCUUUUCAGAGCCACCCA 873 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5912,sp|AF531282.1|AF531282 Homo sapiens histone H3 (HIST1H3I) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCUCA hit 832 : 855 880 (fwd) 35.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC C +A 855 CAAAAGGCUCUUUUCAGAGCCCCUCA 880 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5913,sp|AF531283.1|AF531283 Homo sapiens histone H3 (HIST1H3J) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 833 : 862 887 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 862 CCAAAGGCUCUUUUCAGAGCCACUUA 887 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5914,sp|AF531284.1|AF531284 Homo sapiens histone H2B (HIST1H2BA) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 834 : 810 835 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 810 CCAAAGGCUCUUUUCAGAGCCACUUA 835 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5915,sp|AF531285.1|AF531285 Homo sapiens histone H2B (HIST1H2BB) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 835 : 785 810 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 785 CCAAAGGCUCUUUUCAGAGCCACCUA 810 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5916,sp|AF531286.1|AF531286 Homo sapiens histone H2B (HIST1H2BC) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 836 : 792 817 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 792 CCAAAGGCUCUUUUAAGAGCCACCCA 817 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5917,sp|AF531287.1|AF531287 Homo sapiens histone H2B (HIST1H2BD) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACGCA hit 837 : 793 818 (fwd) 32.82 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC +A 793 CCAAAGGCUCUUUUAAGAGCCACGCA 818 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5918,sp|AF531288.1|AF531288 Homo sapiens histone H2B (HIST1H2BE) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 838 : 790 815 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 790 CCAAAGGCUCUUUUCAGAGCCACUCA 815 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5919,sp|AF531289.1|AF531289 Homo sapiens histone H2B (HIST1H2BF) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 839 : 785 810 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 785 CCAAAGGCUCUUUUAAGAGCCACCCA 810 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5920,sp|AF531290.1|AF531290 Homo sapiens histone H2B (HIST1H2BG) gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACUCA hit 840 : 785 810 (fwd) 36.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC +A 785 UCAAAGGCUCUUUUCAGAGCCACUCA 810 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5921,sp|AF531291.1|AF531291 Homo sapiens histone H2B (HIST1H2BH) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 841 : 780 805 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 780 CCAAAGGCUCUUUUCAGAGCCACUUA 805 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5922,sp|AF531292.1|AF531292 Homo sapiens histone H2B (HIST1H2BI) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUAAGAGCCACCCA hit 842 : 792 817 (fwd) 34.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU U AGAGCCACC+A 792 CCAAAGGCUCUUCUAAGAGCCACCCA 817 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5923,sp|AF531293.1|AF531293 Homo sapiens histone H2B (HIST1H2BJ) gene, complete cds. ----isReversed: 0 ----hitSequence: CUAACGGCUCUUUUAAGAGCCACCCA hit 843 : 789 814 (fwd) 32.89 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGCUCUUUU AGAGCCACC+A 789 CUAACGGCUCUUUUAAGAGCCACCCA 814 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5924,sp|AF531294.1|AF531294 Homo sapiens histone H2B (HIST1H2BK) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 844 : 792 817 (fwd) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 792 CCAAAGGCUCUUUUAAGAGCCACUUA 817 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5925,sp|AF531295.1|AF531295 Homo sapiens histone H2B (HIST1H2BL) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 845 : 782 807 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 782 CCAAAGGCUCUUUUCAGAGCCACUCA 807 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5926,sp|AF531296.1|AF531296 Homo sapiens histone H2B (HIST1H2BM) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGUCCA hit 846 : 801 826 (fwd) 27.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC C+A 801 CCAAAGGCUCUUUUCAGAGCCGUCCA 826 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5927,sp|AF531297.1|AF531297 Homo sapiens histone H2B (HIST1H2BN) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 847 : 804 829 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 804 CCAAAGGCUCUUUUCAGAGCCACUCA 829 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5928,sp|AF531298.1|AF531298 Homo sapiens histone H2B (HIST1H2BO) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 848 : 783 808 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 783 CCAAAGGCUCUUUUCAGAGCCACUCA 808 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5929,sp|AF531299.1|AF531299 Homo sapiens histone H1 (HIST1H1A) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCUA hit 849 : 1196 1221 (fwd) 36.07 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC A 1196 CCAACGGCUCUUUUAAGAGCCACCUA 1221 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5930,sp|AF531300.1|AF531300 Homo sapiens histone H1 (HIST1H1C) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 850 : 1185 1210 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 1185 CAAAAGGCUCUUUUCAGAGCCACCAC 1210 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5931,sp|AF531301.1|AF531301 Homo sapiens histone H1 (HIST1H1T) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 851 : 1007 1032 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 1007 CCAAAGGCUCUUUUAAGAGCCACCCA 1032 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5932,sp|AF531302.1|AF531302 Homo sapiens histone H1 (HIST1H1E) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 852 : 1220 1245 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1220 CCAAAGGCUCUUUUCAGAGCCACCCA 1245 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5933,sp|AF531303.1|AF531303 Homo sapiens histone H1 (HIST1H1D) gene, complete cds. ----isReversed: 0 ----hitSequence: UAAACGGCUCUUUUCAGAGCCACCCA hit 853 : 1277 1302 (fwd) 37.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+GGCUCUUUUCAGAGCCACC+A 1277 UAAACGGCUCUUUUCAGAGCCACCCA 1302 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5934,sp|AF531304.1|AF531304 Homo sapiens histone H1 (HIST1H1B) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 854 : 1113 1138 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1113 CCAAAGGCUCUUUUCAGAGCCACCCA 1138 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5935,sp|AF531305.1|AF531305 Homo sapiens histone H3 (HIST2H3A) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 855 : 969 994 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 969 CAAAAGGCUCUUUUCAGAGCCACCCA 994 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5936,sp|AF531306.1|AF531306 Homo sapiens histone H3 (HIST2H3B) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCUA hit 856 : 937 962 (fwd) 37.71 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC A 937 ACAAAGGCUCUUUUCAGAGCCACCUA 962 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5937,sp|AF531307.1|AF531307 Homo sapiens histone H3 (HIST2H3C) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 857 : 855 880 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 855 CAAAAGGCUCUUUUCAGAGCCACCCA 880 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum07.dat.fasta.gz ----sequence: #5938,sp|AF531308.1|AF531308 Homo sapiens histone H3 (HIST3H3) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 858 : 863 888 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 863 CCAAAGGCUCUUUUAAGAGCCACCCA 888 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum08.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #1841,sp|AK091220.1|AK091220 Homo sapiens cDNA FLJ33901 fis, clone CTONG2008321, highly similar to HISTONE H2B F. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 859 : 427 452 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 427 CCAAAGGCUCUUUUCAGAGCCACCCA 452 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #4368,sp|AK093747.1|AK093747 Homo sapiens cDNA FLJ36428 fis, clone THYMU2011564, highly similar to HISTONE H2B GL105. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 860 : 436 461 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 436 CCAAAGGCUCUUUUCAGAGCCACCCA 461 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #5423,sp|AK094812.1|AK094812 Homo sapiens cDNA FLJ37493 fis, clone BRAWH2015375, moderately similar to Nuclear prelamin A recognition factor, isoform a. ----isReversed: 1 ----hitSequence: CCAAAGACUCAUUUCAGAGCCAACAA hit 861 : 290 265 (rev) 25.21 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAG:CUC UUUC GAG:CA CAA 2530 CCAAAGACUCAUUUCAGAGCCAACAA 2555 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #7631,sp|AK097020.1|AK097020 Homo sapiens cDNA FLJ39701 fis, clone SMINT2011656. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 862 : 1258 1233 (rev) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 1075 CCAAAGGCUCUUUUCAGAGCCAACCA 1100 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #9588,sp|AL133476.17|AL133476 Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 863 : 135499 135524 (fwd) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 135499 CCAAAGGCUCUUUUCAGAGCCAUCAU 135524 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #9715,sp|AL136123.19|AL136123 Human DNA sequence from clone RP11-236M15 on chromosome 13 ----isReversed: 0 ----hitSequence: CCAAAGGUUCUUUUCAGGACCAUCAU hit 864 : 27656 27681 (fwd) 24.80 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG: CUUUUCAG :CCA CA 27656 CCAAAGGUUCUUUUCAGGACCAUCAU 27681 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum09.dat.fasta.gz ----sequence: #9715,sp|AL136123.19|AL136123 Human DNA sequence from clone RP11-236M15 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGUUCUUUUCAGGACCAUCAU hit 865 : 30126 30101 (rev) 24.80 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG: CUUUUCAG :CCA CA 148026 CCAAAGGUUCUUUUCAGGACCAUCAU 148051 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #368,sp|AL139288.15|AL139288 Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUC hit 866 : 94175 94200 (fwd) 36.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 94175 CCAAAGGCUCUUUUCAGAGCCACCUC 94200 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #368,sp|AL139288.15|AL139288 Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3 ----isReversed: 0 ----hitSequence: AUAAAGGCUCUUUUCAGAGCCACCUA hit 867 : 100976 101001 (fwd) 32.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAAGGCUCUUUUCAGAGCCACC A 100976 AUAAAGGCUCUUUUCAGAGCCACCUA 101001 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #368,sp|AL139288.15|AL139288 Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 868 : 133492 133517 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 133492 CCAAAGGCUCUUUUAAGAGCCACCCA 133517 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #368,sp|AL139288.15|AL139288 Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 869 : 99832 99807 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 51732 CCAAAGGCUCUUUUCAGAGCCACCCA 51757 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #808,sp|AL159980.14|AL159980 Human DNA sequence from clone RP11-56M2 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUGCAGAGCCACCUU hit 870 : 36558 36533 (rev) 29.16 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUU CAGAGCCACC 125487 CCAAAGGCUCUUUGCAGAGCCACCUU 125512 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1201,sp|AL162723.12|AL162723 Human DNA sequence from clone RP13-428K23 on chromosome X ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 871 : 23708 23683 (rev) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 169073 CCAAAGGCUCUUUUCAGAGCCAUCAU 169098 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCUCA hit 872 : 10658 10683 (fwd) 31.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC C +A 10658 CCAAAGGCCCUUUUCAGGGCCGCUCA 10683 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 873 : 30987 31012 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 30987 CCAAAGGCUCUUUUCAGAGCCCCCCU 31012 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 874 : 63471 63496 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 63471 CCAAAGGCUCUUUUCAGAGCCACCCA 63496 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACGCA hit 875 : 64963 64988 (fwd) 32.82 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC +A 64963 CCAAAGGCUCUUUUAAGAGCCACGCA 64988 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 876 : 90586 90611 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 90586 CCAAAGGCUCUUUUCAGAGCCACUCA 90611 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 1 ----hitSequence: CCAACGGCCCUUUUCAGGGCCACCUA hit 877 : 95116 95091 (rev) 36.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CUUUUCAG:GCCACC A 5984 CCAACGGCCCUUUUCAGGGCCACCUA 6009 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 878 : 29815 29790 (rev) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 71285 CCAAAGGCUCUUUUAAGAGCCACCCA 71310 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1416,sp|AL353759.8|AL353759 Human DNA sequence from clone RP1-221C16 on chromosome 6. Contains the 3' part of the HFE gene for haemochromatosis protein, tw ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 879 : 13778 13753 (rev) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 87322 CCAAAGGCUCUUUUAAGAGCCACCCA 87347 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1625,sp|AL354896.16|AL354896 Human DNA sequence from clone RP11-512M17 on chromosome 13 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUCUUCAGAGCCAUCAU hit 880 : 153850 153825 (rev) 27.27 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCU UUCAGAGCCA CA 55894 CCAAAGGCUCUCUUCAGAGCCAUCAU 55919 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #1776,sp|AL355472.19|AL355472 Human DNA sequence from clone RP5-827C21 on chromosome 1 ----isReversed: 0 ----hitSequence: ACAAAGGUUCUUUUAAGGACCAAAAC hit 881 : 40704 40729 (fwd) 26.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGG: CUUUU AG :CCA A 40704 ACAAAGGUUCUUUUAAGGACCAAAAC 40729 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2904,sp|AL365356.13|AL365356 Human DNA sequence from clone RP11-336A10 on chromosome 10 ----isReversed: 1 ----hitSequence: CAAAAGACUCUUUUAAGAGUCACUUA hit 882 : 128762 128737 (rev) 28.26 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAG:CUCUUUU AGAG:CAC A 38915 CAAAAGACUCUUUUAAGAGUCACUUA 38940 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #2959,sp|AL390022.11|AL390022 Human DNA sequence from clone RP11-370B6 on chromosome X Contains a novel histone gene similar to H2B. ----isReversed: 1 ----hitSequence: CCAAAAGCUCUUUUCAGAGCCACCGC hit 883 : 6661 6636 (rev) 27.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GCUCUUUUCAGAGC:ACC 2617 CCAAAAGCUCUUUUCAGAGCCACCGC 2642 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #3906,sp|AL512384.9|AL512384 Human DNA sequence from clone RP11-317E16 on chromosome 6. Contains the 3' end of the gene for sectretagogin, the genes for nov ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 884 : 34470 34495 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 34470 CCAAAGGCUCUUUUCAGAGCCACUUA 34495 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #3906,sp|AL512384.9|AL512384 Human DNA sequence from clone RP11-317E16 on chromosome 6. Contains the 3' end of the gene for sectretagogin, the genes for nov ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGAGCCACUCA hit 885 : 40071 40096 (fwd) 30.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC CUUUUCAG GCCAC +A 40071 UCAAAGGCCCUUUUCAGAGCCACUCA 40096 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #3906,sp|AL512384.9|AL512384 Human DNA sequence from clone RP11-317E16 on chromosome 6. Contains the 3' end of the gene for sectretagogin, the genes for nov ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAAUGA hit 886 : 38899 38874 (rev) 28.82 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA A 11065 CCAAAGGCUCUUUUAAGAGCCAAUGA 11090 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #3906,sp|AL512384.9|AL512384 Human DNA sequence from clone RP11-317E16 on chromosome 6. Contains the 3' end of the gene for sectretagogin, the genes for nov ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCUA hit 887 : 33238 33213 (rev) 37.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC A 16726 CAAAAGGCUCUUUUCAGAGCCACCUA 16751 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4157,sp|AL513543.14|AL513543 Human DNA sequence from clone RP11-343J24 on chromosome 1 ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUGAGAGUCACACU hit 888 : 74048 74023 (rev) 25.20 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAG CUCUUUU AGAG CAC + 16860 AAAAAGGCUCUUUUGAGAGUCACACU 16885 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 889 : 94751 94776 (fwd) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 94751 CCAAAGGCCCUUUUUAGGGCCGACCA 94776 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGGGCCACUUA hit 890 : 105217 105242 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC CUUUUCAG GCCAC A 105217 CCAAAGGCUCUUUUCAGGGCCACUUA 105242 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 891 : 113296 113321 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 113296 CAAAAGGCUCUUUUCAGAGCCACCCA 113321 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 892 : 114822 114847 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 114822 CAAAAGGCUCUUUUCAGAGCCACCCA 114847 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUUAGAGCCACCCA hit 893 : 149096 149121 (fwd) 37.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 149096 CCAAAGGCUCUUUUUAGAGCCACCCA 149121 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAA hit 894 : 149203 149178 (rev) 38.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCAA 39754 CCAAAGGCUCUUUUAAGAGCCACCAA 39779 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 895 : 147918 147893 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 41039 CCAAAGGCUCUUUUCAGAGCCACCCA 41064 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 896 : 122515 122490 (rev) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 66442 CCAAAGGCCCUUUUUAGGGCCGACCA 66467 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGGGCCAUUUA hit 897 : 112049 112024 (rev) 25.45 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC CUUUUCAG GCCA A 76908 CCAAAGGCUCUUUUCAGGGCCAUUUA 76933 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 898 : 103970 103945 (rev) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 84987 CAAAAGGCUCUUUUCAGAGCCACCCA 85012 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 899 : 102444 102419 (rev) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 86513 CAAAAGGCUCUUUUCAGAGCCACCCA 86538 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CUAAAGGCUCUUUUCAGAGCCACUGC hit 900 : 74963 74938 (rev) 26.62 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AAAGGCUCUUUUCAGAGCCAC 113994 CUAAAGGCUCUUUUCAGAGCCACUGC 114019 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #4808,sp|AL591493.14|AL591493 Human DNA sequence from clone RP11-196G18 on chromosome 1 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUC hit 901 : 73620 73595 (rev) 34.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC 115337 CCAAAGGCUCUUUUCAGAGCCACUUC 115362 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #6640,sp|AP000758.5|AP000758 Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete sequence. ----isReversed: 1 ----hitSequence: UAAAAGUCUAUUUUAACAGCCACCAA hit 902 : 76532 76507 (rev) 25.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAG:CU:UUUU A:AG:CACCAA 86494 UAAAAGUCUAUUUUAACAGCCACCAA 86519 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #6853,sp|AP001124.4|AP001124 Homo sapiens genomic DNA, chromosome 11q clone:RP11-775A1, complete sequences. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCAAUCAU hit 903 : 42447 42472 (fwd) 25.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA GCUCUUUUCAGAGC A CA 42447 CCAAAGGCUCUUUUCAGAGCAAUCAU 42472 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #6936,sp|AP001266.4|AP001266 Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete sequence. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCAUUAC hit 904 : 40853 40828 (rev) 29.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCA A 135020 CCAAAGGCUCUUUUAAGAGCCAUUAC 135045 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7190,sp|AP001803.4|AP001803 Homo sapiens genomic DNA, chromosome 11q, clone:RP11-100N3, complete sequences. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 905 : 41742 41767 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 41742 CCAAAGGCUCUUUUCAGAGCCACUUA 41767 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7430,sp|AP002959.2|AP002959 Homo sapiens genomic DNA, chromosome 11q clone:RP11-158K18. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCAAUCAU hit 906 : 7841 7866 (fwd) 25.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA GCUCUUUUCAGAGC A CA 7841 CCAAAGGCUCUUUUCAGAGCAAUCAU 7866 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum10.dat.fasta.gz ----sequence: #7567,sp|AP003391.1|AP003391 Homo sapiens genomic DNA, chromosome 11q clone:CTD-2589C9, complete sequences. ----isReversed: 1 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 907 : 9690 9665 (rev) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 36550 ACAAAGGCCCUUUUAAGGGCCACCAC 36575 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #885,sp|AY128653.1|AY128653 Homo sapiens clone HIST4H4 histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCCCCAA hit 908 : 651 676 (fwd) 37.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCC CCAA 651 CAAAAGGCCCUUUUCAGGGCCCCCAA 676 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #886,sp|AY128654.1|AY128654 Homo sapiens clone HIST1H4A histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 909 : 658 683 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 658 CCAAAGGCCCUUUUCAGGGCCGCCCA 683 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #887,sp|AY128655.1|AY128655 Homo sapiens clone HIST1H4B histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAUGGCCCUUUUCAGGGCCGCCCA hit 910 : 642 667 (fwd) 27.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA GGC:CUUUUCAG:GCC CC+A 642 CCAAUGGCCCUUUUCAGGGCCGCCCA 667 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #888,sp|AY128656.1|AY128656 Homo sapiens clone HIST1H4C histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCUCA hit 911 : 676 701 (fwd) 31.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC C +A 676 CCAAAGGCCCUUUUCAGGGCCGCUCA 701 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #889,sp|AY128657.1|AY128657 Homo sapiens clone HIST1H4D histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCCCUUUUCAGGGCCACCUA hit 912 : 652 677 (fwd) 36.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CUUUUCAG:GCCACC A 652 CCAACGGCCCUUUUCAGGGCCACCUA 677 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #890,sp|AY128658.1|AY128658 Homo sapiens clone HIST1H4E histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCGCCCA hit 913 : 663 688 (fwd) 31.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCC CC+A 663 UCAAAGGCCCUUUUCAGGGCCGCCCA 688 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #891,sp|AY128659.1|AY128659 Homo sapiens clone HIST1H4F histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCUC hit 914 : 659 684 (fwd) 33.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC 659 UAAAAGGCCCUUUUCAGGGCCACCUC 684 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #893,sp|AY128661.1|AY128661 Homo sapiens clone HIST1H4H histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 915 : 659 684 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 659 CCAAAGGCCCUUUUCAGGGCCGCCCA 684 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #894,sp|AY128662.1|AY128662 Homo sapiens clone HIST1H4I histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCCCUUUUUAGGGCCCCUAA hit 916 : 652 677 (fwd) 33.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGC:CUUUU AG:GCC C AA 652 AAAAAGGCCCUUUUUAGGGCCCCUAA 677 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #895,sp|AY128663.1|AY128663 Homo sapiens clone HIST1H4J histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCCU hit 917 : 641 666 (fwd) 34.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC+ 641 UAAAAGGCCCUUUUCAGGGCCACCCU 666 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #896,sp|AY128664.1|AY128664 Homo sapiens clone HIST1H4K histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUUAGGGCCCCCAC hit 918 : 640 665 (fwd) 33.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUU AG:GCC CCA 640 CAAAAGGCCCUUUUUAGGGCCCCCAC 665 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #897,sp|AY128665.1|AY128665 Homo sapiens clone HIST1H4L histone H4 gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUCUCAGGGCCACCCA hit 919 : 648 673 (fwd) 33.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUU UCAG:GCCACC+A 648 UCAAAGGCCCUUCUCAGGGCCACCCA 673 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #957,sp|AY131971.1|AY131971 Homo sapiens histone H2A (HIST2H2AA) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 920 : 847 872 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 847 CAAAAGGCUCUUUUCAGAGCCACCCA 872 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #958,sp|AY131972.1|AY131972 Homo sapiens histone H2A (HIST2H2AB) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAA hit 921 : 798 823 (fwd) 38.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCAA 798 CCAAAGGCUCUUUUAAGAGCCACCAA 823 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #958,sp|AY131972.1|AY131972 Homo sapiens histone H2A (HIST2H2AB) gene, complete cds. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUUAGAGCCACCCA hit 922 : 905 880 (rev) 37.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 215 CCAAAGGCUCUUUUUAGAGCCACCCA 240 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #959,sp|AY131973.1|AY131973 Homo sapiens histone H2A (HIST2H2AC) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUUAGAGCCACCCA hit 923 : 785 810 (fwd) 37.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 785 CCAAAGGCUCUUUUUAGAGCCACCCA 810 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #959,sp|AY131973.1|AY131973 Homo sapiens histone H2A (HIST2H2AC) gene, complete cds. ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCAA hit 924 : 892 867 (rev) 38.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACCAA 228 CCAAAGGCUCUUUUAAGAGCCACCAA 253 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #960,sp|AY131974.1|AY131974 Homo sapiens histone H2A (HIST3H2A) gene, complete cds. ----isReversed: 0 ----hitSequence: AUAAAGGCUCUUUUCAGAGCCACCUA hit 925 : 821 846 (fwd) 32.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAAGGCUCUUUUCAGAGCCACC A 821 AUAAAGGCUCUUUUCAGAGCCACCUA 846 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #961,sp|AY131975.1|AY131975 Homo sapiens histone H2B (HIST2H2BA) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUC hit 926 : 798 823 (fwd) 34.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC 798 CCAAAGGCUCUUUUCAGAGCCACUUC 823 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #962,sp|AY131976.1|AY131976 Homo sapiens histone H2B (HIST2H2BB) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUC hit 927 : 798 823 (fwd) 34.32 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC 798 CCAAAGGCUCUUUUCAGAGCCACUUC 823 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #963,sp|AY131977.1|AY131977 Homo sapiens histone H2B (HIST2H2BC) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGGGCCAUUUA hit 928 : 831 856 (fwd) 25.45 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC CUUUUCAG GCCA A 831 CCAAAGGCUCUUUUCAGGGCCAUUUA 856 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #964,sp|AY131978.1|AY131978 Homo sapiens histone H2B (HIST2H2BD) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGGGCCACUUA hit 929 : 830 855 (fwd) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC CUUUUCAG GCCAC A 830 CCAAAGGCUCUUUUCAGGGCCACUUA 855 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #965,sp|AY131979.1|AY131979 Homo sapiens histone H2B (HIST2H2BE) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 930 : 813 838 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 813 CCAAAGGCUCUUUUCAGAGCCACCCA 838 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #966,sp|AY131980.1|AY131980 Homo sapiens histone H2B (HIST3H2BA) pseudogene, complete sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUC hit 931 : 786 811 (fwd) 36.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 786 CCAAAGGCUCUUUUCAGAGCCACCUC 811 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #967,sp|AY131981.1|AY131981 Homo sapiens histone H2B (HIST3H2BB) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 932 : 783 808 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 783 CCAAAGGCUCUUUUCAGAGCCACCCA 808 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #968,sp|AY131982.1|AY131982 Homo sapiens histone H2A (HIST1H2AA) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCUA hit 933 : 683 708 (fwd) 37.50 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC A 683 CAAAAGGCUCUUUUCAGAGCCACCUA 708 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #969,sp|AY131983.1|AY131983 Homo sapiens histone H2A (HIST1H2AB) gene, complete cds. ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCUA hit 934 : 824 849 (fwd) 34.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC A 824 GCAAAGGCUCUUUUCAGAGCCACCUA 849 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #970,sp|AY131984.1|AY131984 Homo sapiens histone H2A (HIST1H2AC) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 935 : 824 849 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 824 CCAAAGGCUCUUUUCAGAGCCCCCCU 849 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #971,sp|AY131985.1|AY131985 Homo sapiens histone H2A (HIST1H2AD) gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 936 : 808 833 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 808 ACAAAGGCUCUUUUCAGAGCCACCCA 833 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #972,sp|AY131986.1|AY131986 Homo sapiens histone H2A (HIST1H2AE) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 937 : 830 855 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 830 CCAAAGGCUCUUUUCAGAGCCACCCA 855 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #973,sp|AY131987.1|AY131987 Homo sapiens histone H2A (HIST1H2AG) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGGGCCACCCA hit 938 : 831 856 (fwd) 34.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCACC+A 831 CCAACGGCUCUUUUCAGGGCCACCCA 856 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #974,sp|AY131988.1|AY131988 Homo sapiens histone H2A (HIST1H2AH) gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUUCU hit 939 : 799 824 (fwd) 29.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA + 799 ACAAAGGCUCUUUUCAGAGCCAUUCU 824 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #975,sp|AY131989.1|AY131989 Homo sapiens histone H2A (HIST1H2AI) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 940 : 825 850 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 825 CCAAAGGCUCUUUUCAGAGCCACCUA 850 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #976,sp|AY131990.1|AY131990 Homo sapiens histone H2A (HIST1H2AJ) gene, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUUC hit 941 : 786 811 (fwd) 34.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC 786 ACAAAGGCUCUUUUCAGAGCCACUUC 811 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #977,sp|AY131991.1|AY131991 Homo sapiens histone H2A (HIST1H2AK) gene, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGUUCUUUUCAGAGCCACCUA hit 942 : 808 833 (fwd) 33.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:UCUUUUCAGA:CCACC A 808 AAAAAGGUUCUUUUCAGAGCCACCUA 833 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #978,sp|AY131992.1|AY131992 Homo sapiens histone H2A (HIST1H2AL) gene, complete cds. ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCUA hit 943 : 811 836 (fwd) 37.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACC A 811 ACAACGGCUCUUUUCAGAGCCACCUA 836 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #979,sp|AY131993.1|AY131993 Homo sapiens histone H2A (HIST1H2AM) gene, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 944 : 799 824 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 799 CAAAAGGCUCUUUUCAGAGCCACCCA 824 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #4135,sp|AY270707.1|AY270707 Homo sapiens clone SKA08-D09 putative promoter sequence. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 945 : 260 285 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 260 CCAAAGGCUCUUUUCAGAGCCCCCCU 285 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #4826,sp|AY283369.1|AY283369 Homo sapiens histone H2B-related protein gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGGUCUUUUCAGAGCCACUGA hit 946 : 544 569 (fwd) 27.35 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG UCUUUUCAGA CCAC A 544 CCAAAGGGUCUUUUCAGAGCCACUGA 569 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9124,sp|BC001131.1|BC001131 Homo sapiens, H2B histone family, member A, clone MGC:2561 IMAGE:2989839, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACUCA hit 947 : 443 468 (fwd) 36.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC +A 443 UCAAAGGCUCUUUUCAGAGCCACUCA 468 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9182,sp|BC001193.1|BC001193 Homo sapiens, H2A histone family, member L, clone MGC:3165 IMAGE:3355200, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AUAAAGGCUCUUUUCAGAGCCACCUA hit 948 : 471 496 (fwd) 32.58 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAAGGCUCUUUUCAGAGCCACC A 471 AUAAAGGCUCUUUUCAGAGCCACCUA 496 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum11.dat.fasta.gz ----sequence: #9548,sp|BC001629.1|BC001629 Homo sapiens, H2A histone family, member O, clone MGC:2238 IMAGE:3536984, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 949 : 494 519 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 494 CAAAAGGCUCUUUUCAGAGCCACCCA 519 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #148,sp|BC002649.1|BC002649 Homo sapiens, H1 histone family, member 2, clone MGC:3992 IMAGE:3608862, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 950 : 709 734 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 709 CAAAAGGCUCUUUUCAGAGCCACCAC 734 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #1371,sp|BC004915.1|BC004915 Homo sapiens, H2A histone family, member X, clone MGC:4759 IMAGE:3537648, mRNA, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 951 : 529 554 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 529 ACAAAGGCCCUUUUAAGGGCCACCAC 554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #1816,sp|BC005827.1|BC005827 Homo sapiens, H2B histone family, member Q, clone MGC:1729 IMAGE:2989788, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 952 : 454 479 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 454 CCAAAGGCUCUUUUCAGAGCCACCCA 479 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #2802,sp|BC007518.1|BC007518 Homo sapiens, H3 histone family, member A, clone MGC:4577 IMAGE:3030790, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 953 : 585 610 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 585 CCAAAGGCUCUUUUCAGAGCCACCCA 610 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #5075,sp|BC010926.1|BC010926 Homo sapiens, Similar to H4 histone family, member A, clone MGC:13512 IMAGE:4273904, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 954 : 388 413 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 388 CCAAAGGCCCUUUUCAGGGCCGCCCA 413 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #5391,sp|BC011694.1|BC011694 Homo sapiens, Similar to H2A histone family, member X, clone MGC:19656 IMAGE:3139343, mRNA, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 955 : 539 564 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 539 ACAAAGGCCCUUUUAAGGGCCACCAC 564 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #5773,sp|BC012185.1|BC012185 Homo sapiens, Similar to H3 histone family, member A, clone MGC:20474 IMAGE:4563941, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCGCCUA hit 956 : 873 898 (fwd) 30.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCC CC A 873 AAAAAGGCUCUUUUAAGAGCCGCCUA 898 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #5980,sp|BC012587.1|BC012587 Homo sapiens, Similar to H4 histone family, member A, clone MGC:13511 IMAGE:4272520, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCGCCCA hit 957 : 391 416 (fwd) 31.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCC CC+A 391 UCAAAGGCCCUUUUCAGGGCCGCCCA 416 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #6407,sp|BC013416.1|BC013416 Homo sapiens, H2A histone family, member X, clone MGC:4703 IMAGE:3534359, mRNA, complete cds. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 958 : 524 549 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 524 ACAAAGGCCCUUUUAAGGGCCACCAC 549 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #7563,sp|BC015544.1|BC015544 Homo sapiens, histone gene complex 1, clone MGC:9629 IMAGE:3913365, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 959 : 482 507 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 482 CAAAAGGCUCUUUUCAGAGCCACCCA 507 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #7997,sp|BC016336.1|BC016336 Homo sapiens, H4 histone family, member A, clone MGC:24014 IMAGE:4101102, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCCCUUUUUAGGGCCCCUAA hit 960 : 372 397 (fwd) 33.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGC:CUUUU AG:GCC C AA 372 AAAAAGGCCCUUUUUAGGGCCCCUAA 397 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #8114,sp|BC016677.1|BC016677 Homo sapiens, H2A histone family, member C, clone MGC:17204 IMAGE:4342191, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGGGCCACCCA hit 961 : 458 483 (fwd) 34.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCACC+A 458 CCAACGGCUCUUUUCAGGGCCACCCA 483 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #8572,sp|BC017361.1|BC017361 Homo sapiens, H4 histone family, member A, clone MGC:29783 IMAGE:4647914, mRNA, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCCU hit 962 : 358 383 (fwd) 34.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC+ 358 UAAAAGGCCCUUUUCAGGGCCACCCU 383 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #8585,sp|BC017379.1|BC017379 Homo sapiens, H2A histone family, member L, clone MGC:1730 IMAGE:2988620, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 963 : 484 509 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 484 CCAAAGGCUCUUUUCAGAGCCCCCCU 509 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #9443,sp|BC019308.1|BC019308 Homo sapiens, H2A histone family, member O, clone MGC:4205 IMAGE:2823572, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 964 : 494 519 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 494 CAAAAGGCUCUUUUCAGAGCCACCCA 519 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #9543,sp|BC019846.1|BC019846 Homo sapiens histone 2, H4, mRNA (cDNA clone MGC:29865 IMAGE:5113140), complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 965 : 350 375 (fwd) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 350 CCAAAGGCCCUUUUUAGGGCCGACCA 375 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum12.dat.fasta.gz ----sequence: #9938,sp|BC020884.1|BC020884 Homo sapiens, H4 histone family, member A, clone MGC:24116 IMAGE:4619662, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUCAGGGCCCCCAA hit 966 : 388 413 (fwd) 37.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUUCAG:GCC CCAA 388 CAAAAGGCCCUUUUCAGGGCCCCCAA 413 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum13.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum13.dat.fasta.gz ----sequence: #3130,sp|BC031333.1|BC031333 Homo sapiens, H3 histone family, member A, clone MGC:45668 IMAGE:3608479, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 967 : 815 840 (fwd) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 815 CCAAAGGCUCUUUUCAGAGCCAACCA 840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum13.dat.fasta.gz ----sequence: #3688,sp|BC032756.1|BC032756 Homo sapiens, H2A histone family, member C, clone MGC:44857 IMAGE:5581631, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 968 : 477 502 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 477 CAAAAGGCUCUUUUCAGAGCCACCCA 502 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum13.dat.fasta.gz ----sequence: #3858,sp|BC033095.1|BC033095 Homo sapiens, H3 histone family, member A, clone MGC:45669 IMAGE:5440523, mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 969 : 452 477 (fwd) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 452 CCAAAGGCUCUUUUCAGAGCCAACCA 477 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum13.dat.fasta.gz ----sequence: #4499,sp|BC034487.1|BC034487 Homo sapiens, H2A histone family, member C, clone MGC:26490 IMAGE:4825623, mRNA, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGUUCUUUUCAGAGCCACCUA hit 970 : 476 501 (fwd) 33.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:UCUUUUCAGA:CCACC A 476 AAAAAGGUUCUUUUCAGAGCCACCUA 501 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #797,sp|BC050602.1|BC050602 Homo sapiens histone 1, H2ac, mRNA (cDNA clone IMAGE:6526471), partial cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 971 : 476 501 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 476 CCAAAGGCUCUUUUCAGAGCCCCCCU 501 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #1400,sp|BC052981.1|BC052981 Homo sapiens histone 1, H3c, mRNA (cDNA clone MGC:60079 IMAGE:6526461), complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCAACCA hit 972 : 726 751 (fwd) 33.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCCA C+A 726 CCAAAGGCUCUUCUCAGAGCCAACCA 751 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #3683,sp|AL390335.3|CNS06C7O Human chromosome 14 DNA sequence BAC R-757K12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACAU hit 973 : 81941 81966 (fwd) 34.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 81941 CCAAAGGCUCUUUUCAGAGCCAACAU 81966 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #3687,sp|AL390801.4|CNS06C7S Human chromosome 14 DNA sequence BAC R-728G21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human) ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACAU hit 974 : 23568 23543 (rev) 34.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 143280 CCAAAGGCUCUUUUCAGAGCCAACAU 143305 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #3703,sp|AL391516.4|CNS06C88 Human chromosome 14 DNA sequence BAC R-629F19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human) ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACAU hit 975 : 127649 127674 (fwd) 34.97 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 127649 CCAAAGGCUCUUUUCAGAGCCAACAU 127674 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #5823,sp|AL021307.1|HS106B9 Human DNA sequence from clone RP1-106B9 on chromosome Xq21 ----isReversed: 1 ----hitSequence: CCAAAGGCUAUUUUCAGAGCCAUCAU hit 976 : 38926 38901 (rev) 25.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCU:UUUUCA:AGCCA CA 70230 CCAAAGGCUAUUUUCAGAGCCAUCAU 70255 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #6031,sp|AL035551.6|HS1100E15 Human DNA sequence from clone RP5-1100E15 on chromosome Xq22.1-22.3 ----isReversed: 1 ----hitSequence: UCAAAGUCACUUUUAAGAGCCACCCA hit 977 : 96905 96880 (rev) 25.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAG:C CUUUU AG G:CACC+A 6440 UCAAAGUCACUUUUAAGAGCCACCCA 6465 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum14.dat.fasta.gz ----sequence: #9798,sp|Z54810.1|HS166G8F H.sapiens CpG island DNA genomic Mse1 fragment, clone 166g8, forward read cpg166g8.ft1a . ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUUAGAGCCACCCA hit 978 : 95 70 (rev) 37.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 130 CCAAAGGCUCUUUUUAGAGCCACCCA 155 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #1983,sp|Z60156.1|HS191A4R H.sapiens CpG island DNA genomic Mse1 fragment, clone 191a4, reverse read cpg191a4.rt1b . ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 979 : 125 100 (rev) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 157 CCAAAGGCCCUUUUUAGGGCCGACCA 182 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 980 : 2826 2851 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 2826 CCAAAGGCUCUUUUCAGAGCCACUCA 2851 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCUA hit 981 : 29514 29539 (fwd) 37.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACC A 29514 ACAACGGCUCUUUUCAGAGCCACCUA 29539 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 982 : 57606 57631 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 57606 CCAAAGGCUCUUUUCAGAGCCACUCA 57631 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 983 : 56465 56440 (rev) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 43910 CAAAAGGCUCUUUUCAGAGCCACCCA 43935 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 984 : 54081 54056 (rev) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 46294 CCAAAGGCUCUUUUCAGAGCCACUUA 46319 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: UCAAAGGCCCUUCUCAGGGCCACCCA hit 985 : 36914 36889 (rev) 33.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUU UCAG:GCCACC+A 63461 UCAAAGGCCCUUCUCAGGGCCACCCA 63486 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCUCA hit 986 : 35611 35586 (rev) 35.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC C +A 64764 CAAAAGGCUCUUUUCAGAGCCCCUCA 64789 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 987 : 30558 30533 (rev) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 69817 CCAAAGGCUCUUUUCAGAGCCACCCA 69842 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #2113,sp|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3 Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ, H2 ----isReversed: 1 ----hitSequence: AAAAAGGUUCUUUUCAGAGCCACCUA hit 988 : 1646 1621 (rev) 33.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:UCUUUUCAGA:CCACC A 98729 AAAAAGGUUCUUUUCAGAGCCACCUA 98754 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #3341,sp|Z49861.1|HS2132H3 H.sapiens gene for histone H3 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 989 : 646 671 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 646 CCAAAGGCUCUUUUAAGAGCCACCCA 671 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #3576,sp|Z65161.1|HS21G2F H.sapiens CpG island DNA genomic Mse1 fragment, clone 21g2, forward read cpg21g2.ft1b . ----isReversed: 1 ----hitSequence: CCAACGGCUCUUUUCAGGGCCACCCA hit 990 : 47 22 (rev) 34.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCACC+A 228 CCAACGGCUCUUUUCAGGGCCACCCA 253 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #6059,sp|Z82198.2|HS302D9 Human DNA sequence from clone RP1-302D9 on chromosome 22 ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 991 : 24614 24589 (rev) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 121267 CCAAAGGCUCUUUUCAGAGCCAUCAU 121292 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 992 : 5345 5370 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 5345 CCAAAGGCUCUUUUAAGAGCCACCCA 5370 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCGCCCA hit 993 : 10378 10403 (fwd) 31.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCC CC+A 10378 UCAAAGGCCCUUUUCAGGGCCGCCCA 10403 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 994 : 22794 22819 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 22794 CCAAAGGCUCUUUUCAGAGCCACCCA 22819 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCAACCA hit 995 : 30973 30998 (fwd) 33.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCCA C+A 30973 CCAAAGGCUCUUCUCAGAGCCAACCA 30998 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCUC hit 996 : 46155 46180 (fwd) 33.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC 46155 UAAAAGGCCCUUUUCAGGGCCACCUC 46180 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 997 : 57432 57457 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 57432 CCAAAGGCUCUUUUCAGAGCCACUUA 57457 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUAAGAGCCACCCA hit 998 : 78769 78794 (fwd) 34.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU U AGAGCCACC+A 78769 CCAAAGGCUCUUCUAAGAGCCACCCA 78794 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCGCCUA hit 999 : 76325 76300 (rev) 30.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCC CC A 12977 AAAAAGGCUCUUUUAAGAGCCGCCUA 13002 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAA hit 1000: 55547 55522 (rev) 40.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCAA 33755 CCAAAGGCUCUUUUCAGAGCCACCAA 33780 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: UAAACGGCUCUUUUCAGAGCCACCCA hit 1001: 39619 39594 (rev) 37.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+GGCUCUUUUCAGAGCCACC+A 49683 UAAACGGCUCUUUUCAGAGCCACCCA 49708 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACUCA hit 1002: 21620 21595 (rev) 36.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC +A 67682 UCAAAGGCUCUUUUCAGAGCCACUCA 67707 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 1003: 4191 4166 (rev) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 85111 ACAAAGGCUCUUUUCAGAGCCACCCA 85136 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #7340,sp|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2. Contains seventeen histone (pseudo)genes and gene RPS10P1 ( ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 1004: 2191 2166 (rev) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 87111 CCAAAGGCUCUUUUCAGAGCCAACCA 87136 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #8020,sp|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAUCAU hit 1005: 14581 14606 (fwd) 32.06 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA CA 14581 CCAAAGGCUCUUUUCAGAGCCAUCAU 14606 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #9223,sp|Z98258.1|HS444G9 Human DNA sequence from clone LA16c-444G9 on chromosome 16 ----isReversed: 0 ----hitSequence: CCAAAGACUCAUUUCAGAGCCAACAA hit 1006: 14711 14736 (fwd) 25.21 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAG:CUC UUUC GAG:CA CAA 14711 CCAAAGACUCAUUUCAGAGCCAACAA 14736 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #9406,sp|Z58592.1|HS45C9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 45c9, forward read cpg45c9.ft1a . ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGANCCACUCA hit 1007: 111 86 (rev) 33.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG UCUUUUCAGA CCAC +A 187 CCAAAGGCUCUUUUCAGANCCACUCA 212 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #9407,sp|Z58593.1|HS45C9R H.sapiens CpG island DNA genomic Mse1 fragment, clone 45c9, reverse read cpg45c9.rt1b . ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 1008: 56 31 (rev) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 212 CCAAAGGCUCUUUUCAGAGCCACCUA 237 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #9423,sp|Z61129.1|HS45E8R H.sapiens CpG island DNA genomic Mse1 fragment, clone 45e8, reverse read cpg45e8.rt1d . ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCAC hit 1009: 200 225 (fwd) 35.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 200 GCAAAGGCUCUUUUCAGAGCCACCAC 225 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum15.dat.fasta.gz ----sequence: #9447,sp|AL021917.4|HS45P21 Human DNA sequence from clone RP1-45P21 on chromosome 6p21.3-22.2 Contains the H4FA gene for H4 histone family member A, a hist ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 1010: 1332 1307 (rev) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 168670 CCAAAGGCCCUUUUCAGGGCCGCCCA 168695 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #1587,sp|Z61847.1|HS59H5F H.sapiens CpG island DNA genomic Mse1 fragment, clone 59h5, forward read cpg59h5.ft1a . ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 1011: 213 238 (fwd) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 213 CCAAAGGCCCUUUUUAGGGCCGACCA 238 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #1588,sp|Z61848.1|HS59H5R H.sapiens CpG island DNA genomic Mse1 fragment, clone 59h5, reverse read cpg59h5.rt1a . ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUUAGGGCCGACCA hit 1012: 125 100 (rev) 27.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUU AG:GCC C+A 154 CCAAAGGCCCUUUUUAGGGCCGACCA 179 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4520,sp|AL034485.16|HS839M11 Human DNA sequence from clone RP5-839M11 on chromosome Xq21.1-23 ----isReversed: 1 ----hitSequence: CCAAAGGGUCUUUUCAGAGCCACUGA hit 1013: 37502 37477 (rev) 27.35 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG UCUUUUCAGA CCAC A 10353 CCAAAGGGUCUUUUCAGAGCCACUGA 10378 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4779,sp|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1. Contains a pseudogene similar to rodent vomeronasal pheromo ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGGGCCACCCA hit 1014: 56815 56840 (fwd) 34.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCACC+A 56815 CCAACGGCUCUUUUCAGGGCCACCCA 56840 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4779,sp|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1. Contains a pseudogene similar to rodent vomeronasal pheromo ----isReversed: 0 ----hitSequence: AAAAAGGCCCUUUUUAGGGCCCCUAA hit 1015: 62954 62979 (fwd) 33.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGC:CUUUU AG:GCC C AA 62954 AAAAAGGCCCUUUUUAGGGCCCCUAA 62979 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4779,sp|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1. Contains a pseudogene similar to rodent vomeronasal pheromo ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCAUUCU hit 1016: 70846 70871 (fwd) 29.57 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCA + 70846 ACAAAGGCUCUUUUCAGAGCCAUUCU 70871 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4779,sp|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1. Contains a pseudogene similar to rodent vomeronasal pheromo ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACUUA hit 1017: 69691 69666 (rev) 34.40 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC A 19326 CCAAAGGCUCUUUUAAGAGCCACUUA 19351 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4779,sp|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1. Contains a pseudogene similar to rodent vomeronasal pheromo ----isReversed: 1 ----hitSequence: CUAACGGCUCUUUUAAGAGCCACCCA hit 1018: 55646 55621 (rev) 32.89 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGCUCUUUU AGAGCCACC+A 33371 CUAACGGCUCUUUUAAGAGCCACCCA 33396 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #4849,sp|Z63573.1|HS87B9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 87b9, forward read cpg87b9.ft1a . ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCUCA hit 1019: 190 215 (fwd) 31.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC C +A 190 CCAAAGGCCCUUUUCAGGGCCGCUCA 215 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #5909,sp|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2. Contains a novel pseudogene, a 60S Ribosomal protein L30 (RP ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 1020: 136793 136818 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 136793 CCAAAGGCUCUUUUCAGAGCCACCUA 136818 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #5909,sp|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2. Contains a novel pseudogene, a 60S Ribosomal protein L30 (RP ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1021: 138662 138687 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 138662 CCAAAGGCUCUUUUCAGAGCCACCCA 138687 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum16.dat.fasta.gz ----sequence: #5909,sp|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2. Contains a novel pseudogene, a 60S Ribosomal protein L30 (RP ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 1022: 135655 135630 (rev) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 4250 CCAAAGGCUCUUUUCAGAGCCACUCA 4275 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum17.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum18.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum18.dat.fasta.gz ----sequence: #1116,sp|AJ329611.1|HSA329611 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RI11C. ----isReversed: 0 ----hitSequence: CCCAAGGCUCUNUUCAGAGCCACCUN hit 1023: 531 556 (fwd) 28.65 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +C AAGGCUCU UUCAGAGCCACC 531 CCCAAGGCUCUNUUCAGAGCCACCUN 556 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum19.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum19.dat.fasta.gz ----sequence: #4544,sp|AJ343028.1|HSA343028 Homo sapiens genomic sequence surrounding NotI site, clone NR1-GO20C. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUC hit 1024: 311 336 (fwd) 36.13 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC 311 CCAAAGGCUCUUUUCAGAGCCACCUC 336 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum20.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum20.dat.fasta.gz ----sequence: #3514,sp|AB000905.1|HSAB905 Homo sapiens DNA for H4 histone, complete cds. ----isReversed: 0 ----hitSequence: AAAAAGGCCCUUUUUAGGGCCCCUAA hit 1025: 1061 1086 (fwd) 33.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGC:CUUUU AG:GCC C AA 1061 AAAAAGGCCCUUUUUAGGGCCCCUAA 1086 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7516,sp|X57130.1|HSH11 H.sapiens H1.1 gene for histone H1 ----isReversed: 0 ----hitSequence: CAAACGGCUCUUUUAAGAGCCACCUA hit 1026: 844 869 (fwd) 35.98 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AA+GGCUCUUUU AGAGCCACC A 844 CAAACGGCUCUUUUAAGAGCCACCUA 869 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7517,sp|X57129.1|HSH12 H.sapiens H1.2 gene for histone H1 ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 1027: 1190 1215 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 1190 CAAAAGGCUCUUUUCAGAGCCACCAC 1215 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7526,sp|M60094.1|HSH1T Human testicular H1 histone (H1) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1028: 1186 1211 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 1186 CCAAAGGCUCUUUUAAGAGCCACCCA 1211 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7531,sp|L19778.1|HSH2A1B Homo sapiens histone H2A.1b mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUCAGGGCCACCCA hit 1029: 469 494 (fwd) 34.99 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC CUUUUCAG GCCACC+A 469 CCAACGGCUCUUUUCAGGGCCACCCA 494 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7533,sp|L19779.1|HSH2A2A Homo sapiens histone H2A.2 mRNA, complete cds. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 1030: 509 534 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 509 CAAAAGGCUCUUUUCAGAGCCACCCA 534 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7534,sp|Z80776.1|HSH2AG H.sapiens H2A/g gene. ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACCCA hit 1031: 633 658 (fwd) 39.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCACC+A 633 ACAAAGGCUCUUUUCAGAGCCACCCA 658 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7536,sp|Z80778.1|HSH2AL H.sapiens H2A/l gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 1032: 571 596 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 571 CCAAAGGCUCUUUUCAGAGCCCCCCU 596 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7537,sp|X14850.1|HSH2AX Human H2A.X mRNA encoding histone H2A.X. ----isReversed: 0 ----hitSequence: ACAAAGGCCCUUUUAAGGGCCACCAC hit 1033: 550 575 (fwd) 37.03 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGC:CUUUU AG:GCCACCA 550 ACAAAGGCCCUUUUAAGGGCCACCAC 575 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7541,sp|X57127.1|HSH2B1 H.sapiens H2B.1 gene for H2B histone ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 1034: 763 788 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 763 CCAAAGGCUCUUUUCAGAGCCACCUA 788 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7542,sp|X57138.1|HSH2B2H2 Human H2B.2 and H2A.1 genes for Histone H2A and H2B ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCCA hit 1035: 1517 1542 (fwd) 39.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACC+A 1517 CAAAAGGCUCUUUUCAGAGCCACCCA 1542 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7542,sp|X57138.1|HSH2B2H2 Human H2B.2 and H2A.1 genes for Histone H2A and H2B ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCC hit 1036: 376 351 (rev) 36.27 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC + 1286 CCAAAGGCUCUUUUCAGAGCCACUCC 1311 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7543,sp|Z80779.1|HSH2BG H.sapiens H2B/g gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1037: 602 627 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 602 CCAAAGGCUCUUUUAAGAGCCACCCA 627 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7544,sp|Z80780.1|HSH2BH H.sapiens H2B/h gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 1038: 812 837 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 812 CCAAAGGCUCUUUUCAGAGCCACUCA 837 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7545,sp|Z80781.1|HSH2BJ H.sapiens H2B/j gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 1039: 610 635 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 610 CCAAAGGCUCUUUUCAGAGCCACUUA 635 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7546,sp|Z80782.1|HSH2BK H.sapiens H2B/k gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUAAGAGCCACCCA hit 1040: 615 640 (fwd) 34.69 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU U AGAGCCACC+A 615 CCAAAGGCUCUUCUAAGAGCCACCCA 640 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7547,sp|Z80783.1|HSH2BL H.sapiens H2B/l gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1041: 500 525 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 500 CCAAAGGCUCUUUUAAGAGCCACCCA 525 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7548,sp|K01887.1|HSH2BPS1 Human histone H2B pseudogene (lambda-HHG55). ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGGGCCACUUA hit 1042: 47 22 (rev) 31.37 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC CUUUUCAG GCCAC A 3 CCAAAGGCUCUUUUCAGGGCCACUUA 28 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7553,sp|X57128.1|HSH31 H.sapiens H3.1 gene for H3 histone ----isReversed: 0 ----hitSequence: GAAAAGGCUCUUUUCAGAGCCACUCA hit 1043: 614 639 (fwd) 34.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGCUCUUUUCAGAGCCAC +A 614 GAAAAGGCUCUUUUCAGAGCCACUCA 639 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7560,sp|Z80784.1|HSH3B H.sapiens H3/b gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCAACCA hit 1044: 662 687 (fwd) 36.54 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCA C+A 662 CCAAAGGCUCUUUUCAGAGCCAACCA 687 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7561,sp|Z80785.1|HSH3H H.sapiens H3/h gene. ----isReversed: 0 ----hitSequence: AAAAAGGCUCUUUUAAGAGCCGCCUA hit 1045: 648 673 (fwd) 30.41 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGGCUCUUUU AGAGCC CC A 648 AAAAAGGCUCUUUUAAGAGCCGCCUA 673 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7562,sp|Z80786.1|HSH3I H.sapiens H3/i gene. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCAA hit 1046: 580 605 (fwd) 40.34 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACCAA 580 CCAAAGGCUCUUUUCAGAGCCACCAA 605 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7570,sp|X60481.1|HSH4AHIS H.sapiens H4/a gene for H4 histone ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCU hit 1047: 527 552 (fwd) 30.75 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+ 527 CCAAAGGCCCUUUUCAGGGCCGCCCU 552 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7571,sp|X60482.1|HSH4BHIS H.sapiens H4/b gene for H4 histone ----isReversed: 0 ----hitSequence: CCAACGGCCCUUUUCAGGGCCACCUA hit 1048: 598 623 (fwd) 36.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGC:CUUUUCAG:GCCACC A 598 CCAACGGCCCUUUUCAGGGCCACCUA 623 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7572,sp|X60483.1|HSH4DHIS H.sapiens H4/d gene for H4 histone ----isReversed: 0 ----hitSequence: CAAAAGGCCCUUUUUAGGGCCCCCAC hit 1049: 941 966 (fwd) 33.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUU AG:GCC CCA 941 CAAAAGGCCCUUUUUAGGGCCCCCAC 966 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7574,sp|X60484.1|HSH4EHIS H.sapiens H4/e gene for H4 histone ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCCU hit 1050: 640 665 (fwd) 34.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC+ 640 UAAAAGGCCCUUUUCAGGGCCACCCU 665 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7575,sp|X60485.1|HSH4FHIS H.sapiens H4/f Pseudogene DNA ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 1051: 628 603 (rev) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 22 CCAAAGGCUCUUUUCAGAGCCACUCA 47 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7576,sp|X60486.1|HSH4GHIS H.sapiens H4/g gene for H4 histone ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCUCA hit 1052: 590 615 (fwd) 31.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC C +A 590 CCAAAGGCCCUUUUCAGGGCCGCUCA 615 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7577,sp|X60487.1|HSH4HHIS H.sapiens H4/h gene for H4 histone ----isReversed: 0 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 1053: 734 759 (fwd) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 734 CCAAAGGCCCUUUUCAGGGCCGCCCA 759 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7578,sp|X67081.1|HSH4HIST H.sapiens histone H4 gene ----isReversed: 0 ----hitSequence: CCAAUGGCCCUUUUCAGGGCCGCCCA hit 1054: 594 619 (fwd) 27.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA GGC:CUUUUCAG:GCC CC+A 594 CCAAUGGCCCUUUUCAGGGCCGCCCA 619 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #7579,sp|Z80787.1|HSH4J H.sapiens H4/j gene. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUUUCAGGGCCGCCCA hit 1055: 614 639 (fwd) 31.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUUUUCAG:GCC CC+A 614 UCAAAGGCCCUUUUCAGGGCCGCCCA 639 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8278,sp|M26150.1|HSHIS3PR Human histone H3 gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1056: 997 1022 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 997 CCAAAGGCUCUUUUCAGAGCCACCCA 1022 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8281,sp|J00189.1|HSHIS4A2 human histone gene h4a segment 2. ----isReversed: 0 ----hitSequence: UAAGAGGCCCUUUUCAGGGCCCCUAC hit 1057: 127 152 (fwd) 26.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A AGGC:CUUUUCAG:GCC C A 127 UAAGAGGCCCUUUUCAGGGCCCCUAC 152 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8283,sp|M60746.1|HSHISAA Human histone H3.1 (H1F3) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUCUCAGAGCCAACCA hit 1058: 626 651 (fwd) 33.05 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUU UCAGAGCCA C+A 626 CCAAAGGCUCUUCUCAGAGCCAACCA 651 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8284,sp|M60747.1|HSHISAB Human histone H1 (H1F3) gene, complete cds. ----isReversed: 0 ----hitSequence: UAAACGGCUCUUUUCAGAGCCACCCA hit 1059: 1141 1166 (fwd) 37.66 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AA+GGCUCUUUUCAGAGCCACC+A 1141 UAAACGGCUCUUUUCAGAGCCACCCA 1166 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8285,sp|M60748.1|HSHISAC Human histone H1 (H1F4) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1060: 1429 1454 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1429 CCAAAGGCUCUUUUCAGAGCCACCCA 1454 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8286,sp|M60749.1|HSHISAD Human histone H4 (H4) gene, complete cds. ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCUC hit 1061: 846 871 (fwd) 33.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC 846 UAAAAGGCCCUUUUCAGGGCCACCUC 871 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8287,sp|M60750.1|HSHISAE Human histone H2B.1 (H2B) gene, complete cds. ----isReversed: 0 ----hitSequence: UCAAAGGCUCUUUUCAGAGCCACUCA hit 1062: 737 762 (fwd) 36.08 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCAC +A 737 UCAAAGGCUCUUUUCAGAGCCACUCA 762 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8288,sp|M60751.1|HSHISAF Human histone H2B.1 (H2B) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACGCA hit 1063: 945 970 (fwd) 32.82 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCAC +A 945 CCAAAGGCUCUUUUAAGAGCCACGCA 970 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8289,sp|M60752.1|HSHISAG Human histone H2A.1 (H2A) gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1064: 769 794 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 769 CCAAAGGCUCUUUUCAGAGCCACCCA 794 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8292,sp|M97755.1|HSHISH1T Human histone H1T gene, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1065: 813 838 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 813 CCAAAGGCUCUUUUAAGAGCCACCCA 838 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8293,sp|X00089.1|HSHISH2A Human histone H2a gene ----isReversed: 0 ----hitSequence: AGCAAGGCUCUUUUCAGAGCCACCUA hit 1066: 705 730 (fwd) 29.86 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A AAGGCUCUUUUCAGAGCCACC A 705 AGCAAGGCUCUUUUCAGAGCCACCUA 730 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8294,sp|X00088.1|HSHISH2B Human histone H2b gene ----isReversed: 0 ----hitSequence: CUAACGGCUCUUUUAAGAGCCACCCA hit 1067: 776 801 (fwd) 32.89 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 + AA+GGCUCUUUU AGAGCCACC+A 776 CUAACGGCUCUUUUAAGAGCCACCCA 801 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8295,sp|M60756.1|HSHISH2BA Human histone H2B.1 mRNA, 3' end. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCACCCAC hit 1068: 357 382 (fwd) 30.42 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA GCUCUUUUCAGAGC CCA 357 CCAAAGGCUCUUUUCAGAGCACCCAC 382 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8297,sp|X00090.1|HSHISH3 Human histone H3 gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1069: 629 654 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 629 CCAAAGGCUCUUUUCAGAGCCACCCA 654 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8299,sp|Z46261.1|HSHISH3A H.sapiens DNA for histone H3a. ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCAC hit 1070: 745 770 (fwd) 35.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 745 GCAAAGGCUCUUUUCAGAGCCACCAC 770 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8302,sp|X00091.1|HSHISH4 Human histone H4 gene ----isReversed: 0 ----hitSequence: UAAGAGGCCCUUUUCAGGGCCCCUAC hit 1071: 449 474 (fwd) 26.39 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +A AGGC:CUUUUCAG:GCC C A 449 UAAGAGGCCCUUUUCAGGGCCCCUAC 474 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8303,sp|X57985.1|HSHIST H.sapiens genes for histones H2B.1 and H2A ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1072: 933 958 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 933 CCAAAGGCUCUUUUCAGAGCCACCCA 958 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8305,sp|X83509.1|HSHISTN15 H.sapiens gene for histone H1.5. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1073: 1038 1063 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 1038 CCAAAGGCUCUUUUCAGAGCCACCCA 1063 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8306,sp|X83549.1|HSHISTN2A H.sapiens gene for histone H2A. ----isReversed: 0 ----hitSequence: ACAACGGCUCUUUUCAGAGCCACCUA hit 1074: 671 696 (fwd) 37.56 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAA+GGCUCUUUUCAGAGCCACC A 671 ACAACGGCUCUUUUCAGAGCCACCUA 696 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8307,sp|X83550.1|HSHISTN3F H.sapiens gene for histone H3. ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCCCUCA hit 1075: 739 764 (fwd) 35.25 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCC C +A 739 CAAAAGGCUCUUUUCAGAGCCCCUCA 764 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum21.dat.fasta.gz ----sequence: #8308,sp|X83548.1|HSHISTN4 H.sapiens gene for histone H4. ----isReversed: 0 ----hitSequence: UCAAAGGCCCUUCUCAGGGCCACCCA hit 1076: 695 720 (fwd) 33.81 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGC:CUU UCAG:GCCACC+A 695 UCAAAGGCCCUUCUCAGGGCCACCCA 720 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum22.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum22.dat.fasta.gz ----sequence: #3558,sp|AL049822.30|HSJ160A22 Human DNA sequence from clone RP1-160A22 on chromosome 6p21.2-22.2 Contains histone genes H2AFE, H2BFE, H4FE and H4FD, ESTs, ST ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGUCCA hit 1077: 3811 3836 (fwd) 27.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC C+A 3811 CCAAAGGCUCUUUUCAGAGCCGUCCA 3836 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum22.dat.fasta.gz ----sequence: #3558,sp|AL049822.30|HSJ160A22 Human DNA sequence from clone RP1-160A22 on chromosome 6p21.2-22.2 Contains histone genes H2AFE, H2BFE, H4FE and H4FD, ESTs, ST ----isReversed: 0 ----hitSequence: UAAAAGGCCCUUUUCAGGGCCACCCU hit 1078: 12801 12826 (fwd) 34.84 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGC:CUUUUCAG:GCCACC+ 12801 UAAAAGGCCCUUUUCAGGGCCACCCU 12826 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum22.dat.fasta.gz ----sequence: #3558,sp|AL049822.30|HSJ160A22 Human DNA sequence from clone RP1-160A22 on chromosome 6p21.2-22.2 Contains histone genes H2AFE, H2BFE, H4FE and H4FD, ESTs, ST ----isReversed: 1 ----hitSequence: CAAAAGGCCCUUUUUAGGGCCCCCAC hit 1079: 19545 19520 (rev) 33.67 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGC:CUUUU AG:GCC CCA 5162 CAAAAGGCCCUUUUUAGGGCCCCCAC 5187 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum22.dat.fasta.gz ----sequence: #3558,sp|AL049822.30|HSJ160A22 Human DNA sequence from clone RP1-160A22 on chromosome 6p21.2-22.2 Contains histone genes H2AFE, H2BFE, H4FE and H4FD, ESTs, ST ----isReversed: 1 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUUC hit 1080: 2675 2650 (rev) 34.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC 22032 ACAAAGGCUCUUUUCAGAGCCACUUC 22057 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum23.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum24.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum24.dat.fasta.gz ----sequence: #7129,sp|Z74409.1|HSU197H3 Human DNA sequence from clone LL0XNC01-197H3 on chromosome X ----isReversed: 0 ----hitSequence: CCAAAGGGUCUUUUCAGAGCCACUGA hit 1081: 10360 10385 (fwd) 27.35 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGG UCUUUUCAGA CCAC A 10360 CCAAAGGGUCUUUUCAGAGCCACUGA 10385 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum24.dat.fasta.gz ----sequence: #7131,sp|Z81145.1|HSU19F10 Human DNA sequence from clone LL0XNC01-19F10 on chromosome X ----isReversed: 1 ----hitSequence: CCAAAAGCUCUUUUCAGAGCCACCGC hit 1082: 28853 28828 (rev) 27.49 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAA:GCUCUUUUCAGAGC:ACC 2622 CCAAAAGCUCUUUUCAGAGCCACCGC 2647 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #93,sp|U90551.1|HSU90551 Human histone 2A-like protein (H2A/l) mRNA, complete cds. ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 1083: 529 554 (fwd) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 529 CCAAAGGCUCUUUUCAGAGCCCCCCU 554 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1084: 17567 17592 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 17567 CCAAAGGCUCUUUUAAGAGCCACCCA 17592 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUAAGAGCCACCCA hit 1085: 33622 33647 (fwd) 38.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUU AGAGCCACC+A 33622 CCAAAGGCUCUUUUAAGAGCCACCCA 33647 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CAAAAGGCUCUUUUCAGAGCCACCAC hit 1086: 85295 85320 (fwd) 38.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ++AAAGGCUCUUUUCAGAGCCACCA 85295 CAAAAGGCUCUUUUCAGAGCCACCAC 85320 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 1087: 97807 97832 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 97807 CCAAAGGCUCUUUUCAGAGCCACCUA 97832 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCUA hit 1088: 107941 107966 (fwd) 34.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC A 107941 GCAAAGGCUCUUUUCAGAGCCACCUA 107966 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1089: 109442 109467 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 109442 CCAAAGGCUCUUUUCAGAGCCACCCA 109467 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAAUGGCCCUUUUCAGGGCCGCCCA hit 1090: 114138 114163 (fwd) 27.95 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA GGC:CUUUUCAG:GCC CC+A 114138 CCAAUGGCCCUUUUCAGGGCCGCCCA 114163 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 0 ----hitSequence: CCAACGGCUCUUUUAAGAGCCACCUA hit 1091: 124002 124027 (fwd) 36.07 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAA+GGCUCUUUU AGAGCCACC A 124002 CCAACGGCUCUUUUAAGAGCCACCUA 124027 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 1 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCAC hit 1092: 120132 120107 (rev) 35.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACCA 126151 GCAAAGGCUCUUUUCAGAGCCACCAC 126176 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCCCA hit 1093: 119034 119009 (rev) 33.11 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC CC+A 127249 CCAAAGGCCCUUUUCAGGGCCGCCCA 127274 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 1 ----hitSequence: GAAAAGGCUCUUUUCAGAGCCACUCA hit 1094: 95215 95190 (rev) 34.22 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +AAAGGCUCUUUUCAGAGCCAC +A 151068 GAAAAGGCUCUUUUCAGAGCCACUCA 151093 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 1 ----hitSequence: CCAAAGGCCCUUUUCAGGGCCGCUCA hit 1095: 36747 36722 (rev) 31.30 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGC:CUUUUCAG:GCC C +A 209536 CCAAAGGCCCUUUUCAGGGCCGCUCA 209561 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #479,sp|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene, hereditary haemochromatosis (HLA-H) gene, RoRet gene, a ----isReversed: 1 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCCCCCU hit 1096: 16395 16370 (rev) 34.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC CC+ 229888 CCAAAGGCUCUUUUCAGAGCCCCCCU 229913 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #4993,sp|Z83336.1|HSZ83336 H.sapiens hH2B/d gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 1097: 654 679 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 654 CCAAAGGCUCUUUUCAGAGCCACUCA 679 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5015,sp|Z83735.1|HSZ83735 H.sapiens hH3/k gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCCA hit 1098: 757 782 (fwd) 39.55 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC+A 757 CCAAAGGCUCUUUUCAGAGCCACCCA 782 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5016,sp|Z83736.1|HSZ83736 H.sapiens hH2A/e gene ----isReversed: 0 ----hitSequence: ACAAAGGCUCUUUUCAGAGCCACUUC hit 1099: 599 624 (fwd) 34.44 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 ACAAAGGCUCUUUUCAGAGCCAC 599 ACAAAGGCUCUUUUCAGAGCCACUUC 624 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5017,sp|Z83737.1|HSZ83737 H.sapiens hH3/j gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUUA hit 1100: 606 631 (fwd) 35.78 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC A 606 CCAAAGGCUCUUUUCAGAGCCACUUA 631 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5018,sp|Z83738.1|HSZ83738 H.sapiens hH2B/e gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCGUCCA hit 1101: 539 564 (fwd) 27.79 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCC C+A 539 CCAAAGGCUCUUUUCAGAGCCGUCCA 564 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5019,sp|Z83739.1|HSZ83739 H.sapiens hH2A/d gene ----isReversed: 0 ----hitSequence: AAAAAGGUUCUUUUCAGAGCCACCUA hit 1102: 578 603 (fwd) 33.46 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 A+AAAGG:UCUUUUCAGA:CCACC A 578 AAAAAGGUUCUUUUCAGAGCCACCUA 603 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5020,sp|Z83740.1|HSZ83740 H.sapiens hH2B/c gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACUCA hit 1103: 618 643 (fwd) 37.73 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCAC +A 618 CCAAAGGCUCUUUUCAGAGCCACUCA 643 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5021,sp|Z83741.1|HSZ83741 H.sapiens hH2A/m gene ----isReversed: 0 ----hitSequence: GCAAAGGCUCUUUUCAGAGCCACCUA hit 1104: 1053 1078 (fwd) 34.17 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 CAAAGGCUCUUUUCAGAGCCACC A 1053 GCAAAGGCUCUUUUCAGAGCCACCUA 1078 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum25.dat.fasta.gz ----sequence: #5022,sp|Z83742.1|HSZ83742 H.sapiens hH2A/c gene ----isReversed: 0 ----hitSequence: CCAAAGGCUCUUUUCAGAGCCACCUA hit 1105: 547 572 (fwd) 37.59 bits :::::<<<<<<____>>>>>>::::: 1 aCAAAGGCuCUUUUCAGaGCCACCAA 26 +CAAAGGCUCUUUUCAGAGCCACC A 547 CCAAAGGCUCUUUUCAGAGCCACCUA 572 ----endhit ----fastaFile: /projects/bio/zasha/seqs/embl/hum26.dat.fasta.gz fracLetsThru=2.00373e-05 (# nucs lets thru=332429/total nucs=1.65905e+10 CPU time: 92867.67u 126.54s 25:49:54.20 Elapsed: 25:53:31