Params: ./cmzasha --no-stderr --no-insert-hack --filter 250 20 data/tRNAscan/tRNAscan-TRNA2-euk.cm @/projects/bio6/zasha/seqs/genomes/human/div1_4.list 1 specfile data/TRNA2-euk.filterspec Build: release Host: gattaca.cs.washington.edu pid: 2715 ----specfile: 2struct-str data/tRNAscan/tRNAscan-TRNA2-euk-type1-Ecoli.bin 1/remember-nuc,15,r-A-C-G-U-_,34,r-AG-C_-U,32,r-AU_-CG,51,l-ACGU-_,50,r-ACGU-_,67,l-ACU_-G,65,r-AG-U_-C 2struct-str data/tRNAscan/tRNAscan-TRNA2-euk-type1-Ecoli.bin 1/remember-nuc,16,l-AG_-CU,15,r-A-C-G-U-_,14,r-CU_-A-G,34,r-A_-C-G-U,32,r-A_-C-G-U,31,l-AG_-CU,54,l-ACGU-_,51,l-ACGU-_,50,r-ACGU-_,49,l-ACGU-_,48,r-ACGU-_,67,l-ACU_-G,66,r-AGU_-C,65,l-ACU-G_,64,r-ACU-G_,63,r-AG_-CU 2struct-str data/tRNAscan/tRNAscan-TRNA2-euk-type1-Ecoli.bin 1/sub,63,48/sub,48,32/sub,13,63 2struct-str data/tRNAscan/tRNAscan-TRNA2-euk-type1-Ecoli.bin 1/sub,63,48/sub,30,500/sub,13,63 Exploded HMM has 1149 states ----hmm-from-cmFileName: data/tRNAscan/tRNAscan-TRNA2-euk.cm ----hmm-build-info: ;(default construction of HMM) Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Saureus_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ;Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Ecoli_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ----2struct-info: 1/remember-nuc,15,r-A-C-G-U-_/remember-nuc,34,r-AG-C_-U/remember-nuc,32,r-AU_-CG/remember-nuc,51,l-ACGU-_/remember-nuc,50,r-ACGU-_/remember-nuc,67,l-ACU_-G/remember-nuc,65,r-AG-U_-C Exploded HMM has 5542 states ----hmm-from-cmFileName: data/tRNAscan/tRNAscan-TRNA2-euk.cm ----hmm-build-info: ;(default construction of HMM) Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Saureus_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ;Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Ecoli_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ----2struct-info: 1/remember-nuc,16,l-AG_-CU/remember-nuc,15,r-A-C-G-U-_/remember-nuc,14,r-CU_-A-G/remember-nuc,34,r-A_-C-G-U/remember-nuc,32,r-A_-C-G-U/remember-nuc,31,l-AG_-CU/remember-nuc,54,l-ACGU-_/remember-nuc,51,l-ACGU-_/remember-nuc,50,r-ACGU-_/remember-nuc,49,l-ACGU-_/remember-nuc,48,r-ACGU-_/remember-nuc,67,l-ACU_-G/remember-nuc,66,r-AGU_-C/remember-nuc,65,l-ACU-G_/remember-nuc,64,r-ACU-G_/remember-nuc,63,r-AG_-CU ----hmm-from-cmFileName: data/tRNAscan/tRNAscan-TRNA2-euk.cm ----hmm-build-info: ;(default construction of HMM) Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Saureus_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ;Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Ecoli_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ----2struct-info: 1/sub,63,48/sub,48,32/sub,13,63 ----hmm-from-cmFileName: data/tRNAscan/tRNAscan-TRNA2-euk.cm ----hmm-build-info: ;(default construction of HMM) Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Saureus_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ;Params: ./cmzasha --no-insert-hack --set-input-mm-file data/Ecoli_0mm.mm --cm2hmm-set-node-combiner-forward-inf data/tRNAscan/tRNAscan-TRNA2-euk.cm 1 1 100000 1 cfsqp 0 1 Build: release Host: gattaca.cs.washington.edu ----2struct-info: 1/sub,63,48/sub,30,500/sub,13,63 ----cmFile: data/tRNAscan/tRNAscan-TRNA2-euk.cm (global) ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: AUUAAUAUAUAUUUAAUUUAAAUAUAUAUUAAAAUAUAUAUAUUUAAUUUAAAUAUAUAUAUUUAAUUUAAAUAUAUAUUUAAAUUAAAUAUAUAUAUUUAAUUUAAAUAUAUAUUUAAUUUAAAUACAUAUUAAAAUAUAUAUAUUUAAUUUAAAUACAUAUUAAAAUAUAUAUUUAAUUUAAAUAUAUAUUUUAAAAAUAUAUAAAUUAUAUAUUCAAAAUAUAUAUUUAAUU hit 0 : 8892893 8893127 (fwd) 24.31 bits (((((((,,.<<<<________>>>>,<<<<<______...................... 1 GcCcccgUG.GCccAGUUGGUAggGCGcugGaCUcuaA...................... 37 ::::: U+ ::::A UU :::: :U::A U AA++++++++++++++++++++++ 8892893 AUUAAUAUAuAUUUAAUU----UAAAUAUAUAUUAAAAuauauauauuuaauuuaaauau 8892948 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 8892949 auauauuuaauuuaaauauauauuuaaauuaaauauauauauuuaauuuaaauauauauu 8893008 ............................................................ - ............................................................ - +++++++++++ ++++++++++++++++++++++++++++++ +++++++++++++++++ 8893009 uaauuuaaauacauauuaaaauauauauauuuaauuuaaauacauauuaaaauauauauu 8893068 ......................._>>>>>,,<<<<<<<____>>>>>>>,.,<<<<<___ 38 .......................AuCcagAGggccugcUUUggggggccG.CcCgGGUUC 73 +++++++++++++++++++++++AU::A:A + :::::UUC 8893069 uaauuuaaauauauauuuuaaaaAUAUAUAA------------------AuUAUAUAUUC 8893110 ____>>>>>))))))): 74 GAaUCCcGgcgggGgCa 90 AA ::::: ::::: 8893111 AAAAUAUAUAUUUAAUU 8893127 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGAUGUAAUGGCGAGCGCUUUGGACUCUGAGUACGGUGAUCAGCGUUCAAGUCUCAGUGGGACCU hit 1 : 16261038 16261109 (fwd) 21.55 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UG::::A U GG A:::: G ACUCU A U C +G 16261038 GGUUCCAUGAUGUAAU-GGCgAGCGCUUUGGACUCUGAGUACGGUG-------------- 16261082 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C G GUUC A UC C G:GG:::C 16261083 ----AUCAGCGUUCAAGUCUCAGUGGGACCU 16261109 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUUUCUGUAGUAUAGUGGUUAUCAUGUUUGCCUCACAUGUGAAAGACCCUUGGCUCGAGACUGGAGGGAAACA hit 2 : 16433142 16433214 (fwd) 30.80 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C: U+:: :AGU GGU+A: ::G:U :CUC +A : A:AG 16433142 GUUUCUGUAGUAUAGU-GGUuAUCAUGUUUGCCUCACAUGUGAAAG-------------- 16433186 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 C :::G UCGA C::: :G:::CA 16433187 ----AcCCUUGGCUCGAGACUGGAGGGAAACA 16433214 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCUUGGUGGUGCAGUGGUAGAAUUCUCGCCUCCCACGUGGGAGACCCGGGUUCAAUUCCCGGCCAAUGCA hit 3 : 16434861 16434931 (fwd) 63.04 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC :::GUG:: CAGU GGUAG :: C : :CUC +A : : GAG 16434861 GCCUUGGUGGUGCAGU-GGUAGAAUUCUCGCCUCCCACGUGGGAG--------------- 16434904 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUC A+UCCCGGC::: GCA 16434905 ---ACCCGGGUUCAAUUCCCGGCCAAUGCA 16434931 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUUUCUGUGGUGUAGUGGUUAUUAUGUUCGCUUCACAUAUGAAAGGUCUCUGGUUCGAGACUGCGUGGGAACA hit 4 : 16567774 16567846 (fwd) 41.93 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C::UG:: :AGU GGU+A: ::G:U: UC +A :A:AG 16567774 GUUUCUGUGGUGUAGU-GGUuAUUAUGUUCGCUUCACAUAUGAAAG-------------- 16567818 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C: ::GUUCGA C:: :::G:::CA 16567819 ----GuCUCUGGUUCGAGACUGCGUGGGAACA 16567846 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUUGGUGGUUCAGUGGUAGAAUUCUCGCCUCCCACGCGGGAGACCCGGGUUCAAUUCCCGGCCAAUGCA hit 5 : 16569497 16569567 (fwd) 78.29 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CUC +A :C: GAG 16569497 GCAUUGGUGGUUCAGU-GGUAGAAUUCUCGCCUCCCACGCGGGAG--------------- 16569540 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUC A+UCCCGGC::::GCA 16569541 ---ACCCGGGUUCAAUUCCCGGCCAAUGCA 16569567 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCCUGGUGGUCUAGUGGCUAGGAUUCGGCGCUUUCACCGCCGCGGCCCGGGUUCGAUUCCCGGCCAGGGAA hit 6 : 16580159 16580230 (fwd) 75.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC::GUG::C:AGU GG +A:G:: C:G::CU U+A ::C:G G 16580159 UCCCUGGUGGUCUAGU-GGCuAGGAUUCGGCGCUUUCACCGCCGCG-------------- 16580203 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::GGG:A 16580204 ----GCCCGGGUUCGAUUCCCGGCCAGGGAA 16580230 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGUGCAAUCGGUUAGCGCGUUCGGCUGUUAACCAUAAGGUUGGUGGUUAGAGACCACCCAGGGACG hit 7 : 16583039 16583112 (fwd) 56.33 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGG::CA U+GGU+AG::CG: G:CU U+AA:C :AG 16583039 GUCUCUGUGGUGCAAUCGGUuAGCGCGUUCGGCUGUUAACCAUAAG-------------- 16583084 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUU GA CC:::C:G:G:C+ 16583085 ----GuUGGUGGUUAGAGACCACCCAGGGACG 16583112 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUCGGCUGUUAACCGAAAGAUUGGUGGUUCGAGCCCACCCAGGGACG hit 8 : 16597253 16597326 (fwd) 80.33 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GCG:U:G:CU U+AA:C:A:AG 16597253 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUCGGCUGUUAACCGAAAG-------------- 16597298 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :::GGUUCGA CC:::C:G:G:C+ 16597299 ----AuUGGUGGUUCGAGCCCACCCAGGGACG 16597326 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: ACCAGCAUGUCUCAGUCGGUAUAGUGUGAGACUCUUAAUCUCAGGGUCGUGGGUUCAAGCCCCACAUUGGGCG hit 9 : 39383489 39383561 (fwd) 46.87 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 CC + UG C: AGU+GGUA :G G:::GACUCU+AAUC::: G 39383489 ACCAGCAUGUCUCAGUCGGUAUAGUGUGAGACUCUUAAUCUCAGG--------------- 39383533 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C::GGGUUC A CCC:: + GG + 39383534 ---GuCGUGGGUUCAAGCCCCACAUUGGGCG 39383561 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GAGAAAGUCAUCGUAGUUACGAAGUUGGCUUAAACCCAGUUUUGGGAGGUUCAAUUCCUUCCUUUCUCU hit 10 : 55209029 55209097 (fwd) 20.82 bits (((((((,.,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgU.GGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::::GU +:C: AGUU :G: : :G:CU AA :C: :+ 55209029 GAGAAAGUcAUCGUAGUU----ACGAAGUUGGCUUAAACCCAGUU--------------- 55209069 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + : :GGUUC A+UCC: :C:::::C 55209070 ----UuGGGAGGUUCAAUUCCUUCCUUUCUCU 55209097 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGCUCCGUGGCGCAAUGGAUAGCGCAUUGGACUUCUAGAGGCUGAAGGCAUUCAAAGGUUCCGGGUUCGAGUCCCGGCGGAGUCG hit 11 : 93784930 93785014 (fwd) 71.15 bits (((((((,,<<<<_______._>>>>,<<<<<______............_>>>>>,,<< 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaA............AuCcagAGgg 47 G+C:CCGUGGC:CA U GG +AG:GC :UG ACU +A + + ++ AU CA:AG 93784930 GGCUCCGUGGCGCAAU-GGAuAGCGCAUUGGACUUCUAgaggcugaaggcAUUCAAAG-- 93784986 <<<<<____>>>>>>>,.,<<<<<_______>>>>>))))))): 48 ccugcUUUggggggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ CCGGGUUCGA UCCCGGCGG:G+C+ 93784987 ----------------GuUCCGGGUUCGAGUCCCGGCGGAGUCG 93785014 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUAAAAUGGCUGAGUAAGCUUUAGACUAUAAAUCUAAAGAGAGAUUGAGCUCUCUUUUUACCA hit 12 : 93871311 93871374 (fwd) 27.56 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G::::::UGGC::AGU ::GC :U:GACU UAAAUC:A:AG 93871311 GGUAAAAUGGCUGAGU-----AAGCUUUAGACUAUAAAUCUAAAG--------------- 93871350 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 :::G:UU GA :C:::::::::CA 93871351 -----AGAGAUU-GAGCUCUCUUUUUACCA 93871374 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUUGACUGUUAACUGAAAGGUUGGUGGUGCAAGCCCAUCCAGGGAUG hit 13 : 142034640 142034713 (fwd) 49.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGGC:CA U+GGU+AG:GCG:U CU U+AA A:AG 142034640 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUUGACUGUUAACUGAAAG-------------- 142034685 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGU C A CC: :C:G:G: + 142034686 ----GuUGGUGGUGCAAGCCCAUCCAGGGAUG 142034713 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGUGCAAUCGGUUAGCGCGUUCCGCUGUUAACCGAAAGCUUGGUGGUUCGAGCCCACCCAGGGAUG hit 14 : 142192744 142192817 (fwd) 60.55 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGG::CA U+GGU+AG::CG:U: :CU U+AA: :A:AG 142192744 GUCUCUGUGGUGCAAUCGGUuAGCGCGUUCCGCUGUUAACCGAAAG-------------- 142192789 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :::GGUUCGA CC:::C:G:G: + 142192790 ----CuUGGUGGUUCGAGCCCACCCAGGGAUG 142192817 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGUGCAAUCGGUUAGCGCGUUCCGCUGUUAACCGAAAGCUUGGUGGUUUGAGCCCACCCAGGGAUG hit 15 : 142372973 142373046 (fwd) 53.63 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGG::CA U+GGU+AG::CG:U: :CU U+AA: :A:AG 142372973 GUCUCUGUGGUGCAAUCGGUuAGCGCGUUCCGCUGUUAACCGAAAG-------------- 142373018 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :::GGUU GA CC:::C:G:G: + 142373019 ----CuUGGUGGUUUGAGCCCACCCAGGGAUG 142373046 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCCAUCGGUUAGUGCCUUCGGCUGUUUGAACCGAAAGGCUGGUGGUUCAAGCCCACCCAGAGAUG hit 16 : 143134416 143134491 (fwd) 44.19 bits (((((((,,<<<<_______._>>>>,<<<<<_____..__>>>>>,,<<<<<<<____> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcua..AAuCcagAGggccugcUUUgg 57 :C:C:GUGGC C U+GGU+AG GC :U:G:CU U+ AA:C:A:AG 143134416 GUCUCUGUGGCGCCAUCGGUuAGUGCCUUCGGCUGUUugAACCGAAAG------------ 143134463 >>>>>>,.,<<<<<_______>>>>>))))))): 58 ggggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G :::GGUUC A CC:::C:G:G: + 143134464 ------GcUGGUGGUUCAAGCCCACCCAGAGAUG 143134491 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUUGGUAGUUCAGCGGUGGCAUUCUCCCCACCUACGCGGGAGACCUGGGUUCAACUCCCGGCCAAAGCA hit 17 : 143670771 143670841 (fwd) 34.58 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC :::GU+:: CAG GGU G :: C : :C C +A : : GAG 143670771 GCAUUGGUAGUUCAGC-GGUGGCAUUCUCCCCACCUACGCGGGAG--------------- 143670814 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUC A UCCC:GC::: GCA 143670815 ---ACCUGGGUUCAACUCCCGGCCAAAGCA 143670841 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCGUUGGCAGUUCAGUGGUAGAAUUCUCGCCUCCCACCCGGGAGACCUGGAUUCCAUUUCCGGCAAAUGCA hit 18 : 143680188 143680258 (fwd) 40.35 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC :: G +:::CAGU GGUAG::: C :G CUC +A C: GAG 143680188 GCGUUGGCAGUUCAGU-GGUAGAAUUCUCGCCUCCCACCCGGGAG--------------- 143680231 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GG:UUC A+U:CC:GC :: GCA 143680232 ---ACCUGGAUUCCAUUUCCGGCAAAUGCA 143680258 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGGUGUAAUGGUGAGCACUCUGGACUCUGAAUCCAGCGAUCCGAGUUCGAGUCUCGGUGGAACCU hit 19 : 143692496 143692567 (fwd) 70.14 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C CUGGACUCU AAUCCAG G 143692496 GGUUCCAUGGUGUAAU-GGUgAGCACUCUGGACUCUGAAUCCAGCG-------------- 143692540 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCG:GUUCGA UC:CGG:GG:::C 143692541 ----AUCCGAGUUCGAGUCUCGGUGGAACCU 143692567 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCGUGAUCGUAUAGUGGUUAGUACUCUGCGUUGUGGCCGCAGCAACCUCGGUUCGAAUCCGAGUCACGGCA hit 20 : 144051850 144051921 (fwd) 64.60 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC::::U G:::AGU GGU+A:::C CUG:: U U + ::CAG 144051850 GCCGUGAUCGUAUAGU-GGUuAGUACUCUGCGUUGUGGCCGCAGCA-------------- 144051894 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC::GGUUCGAAUCC::G::::GGCA 144051895 ----ACCUCGGUUCGAAUCCGAGUCACGGCA 144051921 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCCUGGUGGUCUGGUGGCUAGAAUUUAGCGCUUUCACCGCCGCAGCUCGGGUUGGAUUACCAGUCAGGGAA hit 21 : 144057255 144057326 (fwd) 23.34 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG:: : GU GG +A: :: G::CU U+A ::C 144057255 UCCCUGGUGGUCUGGU-GGCuAGAAUUUAGCGCUUUCACCGCCGCA-------------- 144057299 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GC: GG UU GA+U CC ::::GGG:A 144057300 ----GCUCGGGUUGGAUUACCAGUCAGGGAA 144057326 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUCAGAGCGUUCGGCUAUUAACCGAACGGUGAGUAGUUCAAGACCACCCAGGGACG hit 22 : 145416876 145416949 (fwd) 52.05 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC CA U+GGU AG GCG:U:G:CU U+AA:C:A: G 145416876 GUCUCUGUGGCGCAAUCGGUcAGAGCGUUCGGCUAUUAACCGAACG-------------- 145416921 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::::GUUC A C::::C:G:G:C+ 145416922 ----GuGAGUAGUUCAAGACCACCCAGGGACG 145416949 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCGUGAUCGUAUAGUGGUUAGUACUCUGCGUUGUGGCCGCAGCAACCUCGGUUCGAAUCCGAGUCACGGCA hit 23 : 145451318 145451389 (fwd) 64.60 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC::::U G:::AGU GGU+A:::C CUG:: U U + ::CAG 145451318 GCCGUGAUCGUAUAGU-GGUuAGUACUCUGCGUUGUGGCCGCAGCA-------------- 145451362 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC::GGUUCGAAUCC::G::::GGCA 145451363 ----ACCUCGGUUCGAAUCCGAGUCACGGCA 145451389 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCGGUGAUCGUAUUGUGGUUAGUACUCUGCGCUGUGGCCCCAGCAGCCUUGUCUCCAAUCCGAGUCAUGGCC hit 24 : 145488695 145488766 (fwd) 21.42 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC :::U G::: GU GGU+A:::C CUG :CU U + : CAG 145488695 GCGGUGAUCGUAUUGU-GGUuAGUACUCUGCGCUGUGGCCCCAGCA-------------- 145488739 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCC::G: UC AAU:C::G::: GC 145488740 ----GCCUUGUCUCCAAUCCGAGUCAUGGCC 145488766 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGGUGUAAUGGUAAGCACUCUGGACUCUGAAUCCAGCCAUCUGAGUUCGAGUCUCUGUGGAACCU hit 25 : 145498784 145498855 (fwd) 56.27 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C CUGGACUCU AAUCCAG 145498784 GGUUCCAUGGUGUAAU-GGUaAGCACUCUGGACUCUGAAUCCAGCC-------------- 145498828 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C G:GUUCGA UC:C G:GG:::C 145498829 ----AUCUGAGUUCGAGUCUCUGUGGAACCU 145498855 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGGGUUAAUGGUGAGCACCCUGGACUCUGAAUCAAGCGAUCCGAGUUCAAAUCUCGGUGGUACCU hit 26 : 145523536 145523607 (fwd) 43.65 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:: CC:UGG :A U GGU A: C CU GACUCU AAUC AG G 145523536 GGUUCCAUGGGUUAAU-GGUgAGCACCCUGGACUCUGAAUCAAGCG-------------- 145523580 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCG:GUUC AAUC:CGG:GG ::C 145523581 ----AUCCGAGUUCAAAUCUCGGUGGUACCU 145523607 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUUGACUGUUAACUGAAAGGUUGGUGGUGCAAGCCCAUCCAGGGAUG hit 27 : 145575384 145575457 (fwd) 49.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGGC:CA U+GGU+AG:GCG:U CU U+AA A:AG 145575384 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUUGACUGUUAACUGAAAG-------------- 145575429 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGU C A CC: :C:G:G: + 145575430 ----GuUGGUGGUGCAAGCCCAUCCAGGGAUG 145575457 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGUAGUCGGUUAGCGCGUUCGGCUGUUAACCGAAAAGUUGGUGGUUCGAGCCCACCCAGGAACG hit 28 : 145698652 145698725 (fwd) 72.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G: :C:GUGGC::AGU+GGU+A::GCG:U:G:CU U+AA:C:A:A 145698652 GUCUCUGUGGCGUAGUCGGUuAGCGCGUUCGGCUGUUAACCGAAAA-------------- 145698697 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G: :C+ 145698698 ----GuUGGUGGUUCGAGCCCACCCAGGAACG 145698725 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGGUGUAAUGGUGAGGGCUUUGGACUCUGACUACAGUGAUCAGAGUUCAAGUCUCAGUGGGACCU hit 29 : 146441891 146441962 (fwd) 39.28 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG: :A U GGU A: :C UG ACUCU A U CA +G 146441891 GGUUCCAUGGUGUAAU-GGUgAGGGCUUUGGACUCUGACUACAGUG-------------- 146441935 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C G:GUUC A UC:C G:GG:::C 146441936 ----AUCAGAGUUCAAGUCUCAGUGGGACCU 146441962 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCGUGAUCUUAUUGUGGUUAGUACUUUACGCGGUGGCCGCAGCAGCCUGGGCUCGAAUCCCAGUCGUGGCA hit 30 : 146532825 146532896 (fwd) 28.12 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC :::U ::: GU GGU+A::: U ::C U + :: A 146532825 GCCGUGAUCUUAUUGU-GGUuAGUACUUUACGCGGUGGCCGCAGCA-------------- 146532869 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCC:GGG UCGAAUCCC:G::: GGCA 146532870 ----GCCUGGGCUCGAAUCCCAGUCGUGGCA 146532896 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUUGGCGGUACAGUGGCAGAAUUCUCGCCUCCCACACGGGAGACCUGGAUUCCAUUUCCGGCAAAUGCA hit 31 : 146536438 146536508 (fwd) 31.40 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::: G G:: CAGU GG AG :: C :G CUC +A C: GAG 146536438 GCAUUGGCGGUACAGU-GGCAGAAUUCUCGCCUCCCACACGGGAG--------------- 146536481 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GG:UUC A+U:CC:GC :::GCA 146536482 ---ACCUGGAUUCCAUUUCCGGCAAAUGCA 146536508 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUUCCAUGGUGUAAUGGUAAGCACUCUGGACUCUGAAUCCAGCGAUCCGAGUUCGAGUCUCGGUGGAACCU hit 32 : 146548652 146548723 (fwd) 68.81 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C CUGGACUCU AAUCCAG G 146548652 GGUUCCAUGGUGUAAU-GGUaAGCACUCUGGACUCUGAAUCCAGCG-------------- 146548696 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCG:GUUCGA UC:CGG:GG:::C 146548697 ----AUCCGAGUUCGAGUCUCGGUGGAACCU 146548723 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUUGACUGUUAACUGAAAGGUUGGUGGUGCAAGCCCAUCCAGGGAUG hit 33 : 146825191 146825264 (fwd) 49.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGGC:CA U+GGU+AG:GCG:U CU U+AA A:AG 146825191 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUUGACUGUUAACUGAAAG-------------- 146825236 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGU C A CC: :C:G:G: + 146825237 ----GuUGGUGGUGCAAGCCCAUCCAGGGAUG 146825264 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCCUGGUAGUCUAGUGGCUAAAGUUUGGCGCUUUCACCGCCGGGACUGGUUGAUUCCAGAUCAGGGGA hit 34 : 146936384 146936452 (fwd) 21.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 CCC:::U+:: AGU GG +A :: :G::CU U+A ::C: G 146936384 UCCCUGGUAGUCUAGU-GGCuAAAGUUUGGCGCUUUCACCGCCGGG-------------- 146936428 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C:GGUU GA+UCC:G :::GGG A 146936429 ----A--CUGGUU-GAUUCCAGAUCAGGGGA 146936452 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: AGCAGAGUGGCGCAGCGGAAGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCCUCUGCUA hit 35 : 150860518 150860589 (fwd) 68.96 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 ::C:::GUG:C:CAG GG AG:G:GCUGG:C C +AA:CCAGAG 150860518 AGCAGAGUGGCGCAGC-GGAAGCGUGCUGGGCCCAUAACCCAGAG--------------- 150860561 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C:::GG UCGAA CC:::C:::G::A 150860562 ---GuCGAUGGAUCGAAACCAUCCUCUGCUA 150860589 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCCUGGUGGUCUAGUGGCUAGGAUUCUAGUGCUUUAACUGCCAGCGCCCAGGUUCAAUUCCCGGUUAGGAAA hit 36 : 158607453 158607525 (fwd) 36.00 bits (((((((,,<<<<_______._>>>>,<<<<<._______.>>>>>,,<<<<<<<____> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGa.CUcuaAA.uCcagAGggccugcUUUgg 57 : CC:+:UG::C:AGU GG +A:G:: CU G CU UAA C AG 158607453 UCCCUGGUGGUCUAGU-GGCuAGGAUUCUAGUgCUUUAACuGCCAGC------------- 158607498 >>>>>>,,<<<<<_______>>>>>))))))): 58 ggggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCC GGUUC A+UCC GG:+:GG :A 158607499 ------GCCCAGGUUCAAUUCCCGGUUAGGAAA 158607525 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 37 : 158628115 158628197 (fwd) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 158628115 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 158628166 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 158628167 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 158628197 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUGGGUGGUUCAGUGGUAGAAUUCUCGCCUGCCACGCGGGAGGCCCGGGUUCGAUUCCCGGCCCAUGCA hit 38 : 158629886 158629956 (fwd) 82.13 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 158629886 GCAUGGGUGGUUCAGU-GGUAGAAUUCUCGCCUGCCACGCGGGAG--------------- 158629929 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::::GCA 158629930 ---GCCCGGGUUCGAUUCCCGGCCCAUGCA 158629956 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 39 : 158687515 158687597 (fwd) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 158687515 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 158687566 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 158687567 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 158687597 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUGGGUGGUUCAGUGGUAGAAUUCUCGCCUGCCACGCGGGAGGCCCGGGUUCGAUUCCCGGCCCAUGCA hit 40 : 158689241 158689311 (fwd) 82.13 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 158689241 GCAUGGGUGGUUCAGU-GGUAGAAUUCUCGCCUGCCACGCGGGAG--------------- 158689284 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::::GCA 158689285 ---GCCCGGGUUCGAUUCCCGGCCCAUGCA 158689311 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 41 : 158694896 158694978 (fwd) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 158694896 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 158694947 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 158694948 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 158694978 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUGGGUGGUUCAGUGGUAGAAUUCUCGCCUGCCACGCGGGAGGCCCGGGUUCGAUUCCCGGCCCAUGCA hit 42 : 158696672 158696742 (fwd) 82.13 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 158696672 GCAUGGGUGGUUCAGU-GGUAGAAUUCUCGCCUGCCACGCGGGAG--------------- 158696715 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::::GCA 158696716 ---GCCCGGGUUCGAUUCCCGGCCCAUGCA 158696742 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 43 : 158702306 158702388 (fwd) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 158702306 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 158702357 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 158702358 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 158702388 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUGGGUGGUUCAGUGGUAGAAUUCUCGCCUGCCACGCGGGAGGCCCGGGUUCGAUUCCCGGCCCAUGCA hit 44 : 158704032 158704102 (fwd) 82.13 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 158704032 GCAUGGGUGGUUCAGU-GGUAGAAUUCUCGCCUGCCACGCGGGAG--------------- 158704075 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::::GCA 158704076 ---GCCCGGGUUCGAUUCCCGGCCCAUGCA 158704102 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 45 : 158709687 158709769 (fwd) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 158709687 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 158709738 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 158709739 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 158709769 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCAUAGGUGGUUCAGUGGUAGAAUUCUUGCCUGCCACGCAGGAGGCCCAGGUUUGAUUCCUGGCCCAUGCA hit 46 : 158719130 158719200 (fwd) 69.00 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC:: :GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 158719130 GCAUAGGUGGUUCAGU-GGUAGAAUUCUUGCCUGCCACGCAGGAG--------------- 158719173 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCC:GGUU GA+UCC:GGC: ::GCA 158719174 ---GCCCAGGUUUGAUUCCUGGCCCAUGCA 158719200 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCUUGUUACUAUAGUGGUGAGUAUCUCUGCCUGUCAUGCGUGAGAGAGGGGGUCGAUUCCCCGACGGGGAG hit 47 : 158761709 158761780 (fwd) 27.93 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC::::U+ :::AGU GGU A::: G:CU U+A :C AG 158761709 UCCUUGUUACUAUAGU-GGUgAGUAUCUCUGCCUGUCAUGCGUGAG-------------- 158761753 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 ::GGG UCGA+UCCC::::::GG:+ 158761754 ----AGAGGGGGUCGAUUCCCCGACGGGGAG 158761780 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 48 : 158769677 158769748 (fwd) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 158769677 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 158769721 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 158769722 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 158769748 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UACUCGUUAGUAUAGUGGUGCGUAUCCCCGUCUGUCACGCGGGAGAGCGGGGUUCGCUCUCCCGACGGGGAG hit 49 : 158770689 158770760 (fwd) 34.05 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C:C::U+::::AGU GGU :::: C::G CU U+A C::GAG 158770689 UACUCGUUAGUAUAGU-GGUgCGUAUCCCCGUCUGUCACGCGGGAG-------------- 158770733 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C:GG UUCG + CC:G::G:G :+ 158770734 ----AGCGGGGUUCGCUCUCCCGACGGGGAG 158770760 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUCGGCUGUUAACCGAAAGGUUGGUGGUUCGAUCCCACCCAGGGACG hit 50 : 158778805 158778878 (fwd) 83.64 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GCG:U:G:CU U+AA:C:A:AG 158778805 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUCGGCUGUUAACCGAAAG-------------- 158778850 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA+ CC:::C:G:G:C+ 158778851 ----GuUGGUGGUUCGAUCCCACCCAGGGACG 158778878 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCUAGCUAGAUCAGUUGGUAGAGCAUAAGACUCUUAAUCUCAGGGUCAUGGGUUUGAGCCCUACGUUGGGCG hit 51 : 162753527 162753599 (fwd) 42.39 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G C::+:U+G :CAGUUGGUAG: C : :GACUCU+AAUC: : G 162753527 GUCUAGCUAGAUCAGUUGGUAGAGCAUAAGACUCUUAAUCUCAGG--------------- 162753571 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C:: GGUU GA CC :::+::G C+ 162753572 ---GuCAUGGGUUUGAGCCCUACGUUGGGCG 162753599 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGCUCGUUGGUCUAGGGGUAUGAUUCUCGCUUCGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCC hit 52 : 164871339 164871410 (fwd) 76.50 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G:C:C::UG::C:AG GGUA:G:: CU:G: UC + :C:AGAG 164871339 GGCUCGUUGGUCUAGG-GGUAUGAUUCUCGCUUCGGGUGCGAGAG--------------- 164871382 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCCGGGUUC AAUCCCGG::G:G:C 164871383 ---GuCCCGGGUUCAAAUCCCGGACGAGCCC 164871410 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGCAGUAAAGUAGGGUGGUUAAGACAAGGGGCUCUGGAGCAAGACUGCCCAAGAUCAAAUCCUGGUGCUGCCA hit 53 : 175917414 175917486 (fwd) 21.41 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:::: +G: : GU GGU+A: :C G CUCU +A C AG +U 175917414 GGCAGUAAAGUAGGGU-GGUuAAGACAAGGGGCUCUGGAGCA--AG-------ACU---- 175917459 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCC::G UC AAUC::GG::::G:CA 175917460 ----GCCCAAGAUCAAAUCCUGGUGCUGCCA 175917486 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAAGUCCCUGUUCGGGCG hit 54 : 201653088 201653160 (fwd) 83.78 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GCCC:+:U+GC:CAGU+GGUAG:GC :::GACU U+AAUC::: G 201653088 GCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGG--------------- 201653132 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC:GGGUUC A UCCC:G:+:GGGC+ 201653133 ---GuCCAGGGUUCAAGUCCCUGUUCGGGCG 201653160 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GCCCGGAGAGCUCAGUGGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAAGUCCUCGUUCGGGCA hit 55 : 202620704 202620776 (fwd) 62.86 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCCC:+: +GC:CAGU GG +AG:GC :::GACU U+AAUC::: G 202620704 GCCCGGAGAGCUCAGU-GGGuAGAGCAUCAGACUUUUAAUCUGAGG-------------- 202620748 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC GGUUC A UCC G:+:GGGCA 202620749 ----GuCCAGGGUUCAAGUCCUCGUUCGGGCA 202620776 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGCUCCAUAGCUCAGUGGUUAGAGCACUGGUCUUGUAAACCAGGGGUCGCGAGUUCGAUCCUCGCUGGGGCCU hit 56 : 219694638 219694710 (fwd) 83.00 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:CC:U+GC:CAGU GGU+AG:GC CUGG:CU +AA:CCAG G 219694638 GGCUCCAUAGCUCAGU-GGUuAGAGCACUGGUCUUGUAAACCAGGG-------------- 219694682 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C:CG:GUUCGA+ C:CG::GG:G:C 219694683 ----GuCGCGAGUUCGAUCCUCGCUGGGGCCU 219694710 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GGUAAAAUGACUGAGUAAGCAUUAGACUAUAAAUCUAAAGACAGAGGUCAAGACCUCUUUUUACCA hit 57 : 235145523 235145588 (fwd) 35.35 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G::::::UG:C::AGU ::G: :U:GACU UAAAUC:A:AG 235145523 GGUAAAAUGACUGAGU-----AAGCAUUAGACUAUAAAUCUAAAG--------------- 235145562 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C:::GG UC A CC:::::::::CA 235145563 ---ACAGAGG-UCAAGACCUCUUUUUACCA 235145588 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UAGGACUUGGUGUAAUAGGUAGCACGAAGAGAUUUGGAUUCUCAGGGGUAGGUUCAAUUCCUAUAGUUCUGG hit 58 : 235147011 235147082 (fwd) 33.24 bits (((((((,,<<<<________>>>>,<.<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGUAggGCGc.ugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :: :C:UGG:::A U GGUA:::CG ::GA U A UC:: AG 235147011 UAGGACUUGGUGUAAUAGGUAGCACGAaGAGAUUUGGAUUCUC-AG-------------- 235147055 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G ::GGUUC A+UCC:: :G: :: + 235147056 ----GGGUAGGUUCAAUUCCUAUAGUUCUGG 235147082 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: GUCAGGAUGGCCGAGUGGUCUAAGGCGCCAGACUCAAGGUAAGCACCUUGCCUGCGGGCUUUCUGGUCUCCGGAUGGAGGCGUGGGUUCGAAUCCCACUUCUGACA hit 59 : 245982899 245983004 (fwd) 65.67 bits (((((((,,<<<<_______.._>>>>,<<<<<______..................... 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaA..................... 37 G:C::+:UGGCC:AGU GGU +A:GGCGC::GACUC A+ +++ + ++ + 245982899 GUCAGGAUGGCCGAGU-GGUcuAAGGCGCCAGACUCAAGguaagcaccuugccugcgggc 245982957 ._>>>>>,,<<<<<<<____>>>>>>>,,<<<<<_______>>>>>))))))): 38 .AuCcagAGggccugcUUUggggggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 + UC::G+ ::CC GG::GC::GGGUUCGAAUCCC:::+::G:CA 245982958 uUUCUGGU-CUCCGG------AUGGAGGCGUGGGUUCGAAUCCCACUUCUGACA 245983004 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 0 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGAAA hit 60 : 245983292 245983363 (fwd) 71.48 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : CC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 245983292 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 245983336 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GG :A 245983337 ----GCCCGGGUUCGAUUCCCGGUCAGGAAA 245983363 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUAAGAUGGCAGAGCCCAGCAAUUGCAUAAAACUUAAAACUUUACAAUCAGAGGUUCAACUCCUCUUCUUAACA hit 61 : 235148179 235148105 (rev) 29.84 bits (((((((,,<<<<____..____>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUU..GGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G::::::UGGC: AG + G A :GC :::: CU AAA :::: 10979763 GUUAAGAUGGCAGAGCCcaGCAAUUGCAUAAAACUUAAAACUUUACA------------- 10979809 >>>>>,.,<<<<<_______>>>>>))))))): 59 gggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 +C:::GGUUC A UCC:::::::::CA 10979810 -----AuCAGAGGUUCAACUCCUCUUCUUAACA 10979837 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UAUUAUAUAAUAUAAUAUAUAUUAUUAUAUAUUUAUAUAUUAUAUAAUAUUAUAUAAUAUUAUAUAAUAUUAUUAUAUAUUAUAUAAUUAUAUAUUAUUAUAUAAUAUUAUUAUAUAUUAUAUAAUGUAAUAUAUAAUUAUAUAAUAUUAUUAUAUAUUAUAUAAUGUAAUAUAUAAUUAUAUAAUAUUAUUAUAUAUUAUAUAAUAUAAUAUAUAAUAUAUAAUAUAAUAUUAUUAUAUAAUAU hit 62 : 229482799 229482555 (rev) 20.72 bits (((((((,,<<<<_______._>>>>,<<<<<______...................... 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaA...................... 37 :::::::U+::::A U +A:::: :U::A U +A++++++++++++++++++++++ 16645143 UAUUAUAUAAUAUAAU-AUAuAUUAUUAUAUAUUUAUAuauuauauaauauuauauaaua 16645201 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 16645202 uuauauaauauuauuauauauuauauaauuauauauuauuauauaauauuauuauauauu 16645261 ............................................................ - ............................................................ - +++++++ +++++++++++++++++++++++++++++++++++++++ ++++++++++++ 16645262 auauaauguaauauauaauuauauaauauuauuauauauuauauaauguaauauauaauu 16645321 ....................................._>>>>>,,<<<<<<<____>>>> 38 .....................................AuCcagAGggccugcUUUggggg 60 +++++++++++++++++++++++++++++++++++++AU::A:A 16645322 auauaauauuauuauauauuauauaauauaauauauaAUAUAUA---------------- 16645365 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :::: A+U ::::::::::: 16645366 ---AuAUAAU-----AUU-AUUAUAUAAUAU 16645387 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCAGGAGAGCUCAGUGGUGAUGGGAUGAGAUCUGGACUCACACCUCUAGGCCUGGGUUCAAAUCCCAGGUCUAGCG hit 63 : 204261929 204261853 (rev) 23.57 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC ::+ + C AGU GGU A G :: GA A UC :: :: 41866013 GCCAGGAGAGCUCAGU-GGUgAUGGGAUGAGAUCUGGACUCACAC-CUC----------- 41866059 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 ::GCC:GGGUUC AAUCCC:G +:: GC+ 41866060 -UAGGCCUGGGUUCAAAUCCCAGGUCUAGCG 41866089 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAAGUCCCUGUUCGGGCG hit 64 : 201653663 201653591 (rev) 83.78 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GCCC:+:U+GC:CAGU+GGUAG:GC :::GACU U+AAUC::: G 44474279 GCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGG--------------- 44474323 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC:GGGUUC A UCCC:G:+:GGGC+ 44474324 ---GuCCAGGGUUCAAGUCCCUGUUCGGGCG 44474351 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCCAUAGUGUACUGGUUAUCACAUUCACCUAACACGCGAAAGGUCCUUGGUUUGAAACCAGGCAGAAACA hit 65 : 177423729 177423657 (rev) 48.25 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C U+G:::A U GGU+A:::C :U:::CU +A :::A:AG 68704213 GUUUCCAUAGUGUACU-GGUuAUCACAUUCACCUAACACGCGAAAG-------------- 68704257 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC::GGUU GAA CC::G G:::CA 68704258 ----GuCCUUGGUUUGAAACCAGGCAGAAACA 68704285 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: CCCUGUGGUCUAGUGGUUAGGAGUUGGUGCUUUCGUCAUGACAGCCCAGGUUCAAUUCCUGGUUAGAGA hit 66 : 169396983 169396915 (rev) 26.17 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C:+ UG :C:AGU GGU+A:G: : ::CU U++ :: : 76730959 CCCUG--UGGUCUAGU-GGUuAGGAGUUGGUGCUUUCGUCAUGACA-------------- 76731001 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCC:GGUUC A+UCC:GG +:G :A 76731002 ----GCCCAGGUUCAAUUCCUGGU-UAGAGA 76731027 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGCUCGUUGGUCUAGGGGUAUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCC hit 67 : 164872173 164872102 (rev) 75.90 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G:C:C::UG::C:AG GGUA:G:: CU:G: U + :C:AGAG 81255769 GGCUCGUUGGUCUAGG-GGUAUGAUUCUCGCUUAGGGUGCGAGAG--------------- 81255812 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCCGGGUUC AAUCCCGG::G:G:C 81255813 ---GuCCCGGGUUCAAAUCCCGGACGAGCCC 81255840 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCUGUGGUGUAGUAGUUACCACGCUGGCCUAACACACGGAAGGUCCUCUGUUUGAAACUUGACGGAAACA hit 68 : 162850999 162850927 (rev) 21.46 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C:GUGG:: AGU GU+A ::CG G CU +A C AG 83276943 GUUUCUGUGGUGUAGU-AGUuACCACGCUGGCCUAACACACGGAAG-------------- 83276987 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C : GUU GAA C : C:G:::CA 83276988 ----GuCCUCUGUUUGAAACUUGACGGAAACA 83277015 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCAGGAUGGCCGAGCGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCCCCUGGAGGCGUGGGUUCGAAUCCCACUCCUGACA hit 69 : 158768988 158768906 (rev) 77.20 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G:C::::UGGCC:AG GGU +A:GGCGCUG:: UC + ::CAG+ ::CC +U 87358954 GUCAGGAUGGCCGAGC-GGUcuAAGGCGCUGCGUUCAGGUCGCAGU-CUCC---CCU--- 87359005 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GG::GC::GGGUUCGAAUCCC::::::G:CA 87359006 -GGAGGCGUGGGUUCGAAUCCCACUCCUGACA 87359036 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCAUUGGUGGUUCAGUGGUAGAAUUCUCGCCUGCCACGCGGGAGGCCCGGGUUCGAUUCCCGGCCAAUGCA hit 70 : 158762481 158762411 (rev) 81.60 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CU +A :C: GAG 87365461 GCAUUGGUGGUUCAGU-GGUAGAAUUCUCGCCUGCCACGCGGGAG--------------- 87365504 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGGC::::GCA 87365505 ---GCCCGGGUUCGAUUCCCGGCCAAUGCA 87365531 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUCGUUAGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCGAUUCCCCGACGGGGAG hit 71 : 158709050 158708979 (rev) 72.91 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:C::U+::::AGU GGU A:::: C::G:CU U+A :C::GAG 87418892 UCCUCGUUAGUAUAGU-GGUgAGUAUCCCCGCCUGUCACGCGGGAG-------------- 87418936 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUCGA+UCCC:G::G:GG:+ 87418937 ----ACCGGGGUUCGAUUCCCCGACGGGGAG 87418963 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 72 : 158708392 158708321 (rev) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 87419550 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 87419594 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 87419595 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 87419621 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 73 : 158708034 158707963 (rev) 76.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 87419908 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 87419952 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 87419953 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 87419979 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUCGUUAGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCGAUUCCCCGACGGGGAG hit 74 : 158701669 158701598 (rev) 72.91 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:C::U+::::AGU GGU A:::: C::G:CU U+A :C::GAG 87426273 UCCUCGUUAGUAUAGU-GGUgAGUAUCCCCGCCUGUCACGCGGGAG-------------- 87426317 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUCGA+UCCC:G::G:GG:+ 87426318 ----ACCGGGGUUCGAUUCCCCGACGGGGAG 87426344 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 75 : 158701011 158700940 (rev) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 87426931 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 87426975 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 87426976 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 87427002 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 76 : 158700654 158700583 (rev) 76.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 87427288 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 87427332 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 87427333 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 87427359 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUCGUUAGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCGAUUCCCCGACGGGGAG hit 77 : 158694259 158694188 (rev) 72.91 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:C::U+::::AGU GGU A:::: C::G:CU U+A :C::GAG 87433683 UCCUCGUUAGUAUAGU-GGUgAGUAUCCCCGCCUGUCACGCGGGAG-------------- 87433727 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUCGA+UCCC:G::G:GG:+ 87433728 ----ACCGGGGUUCGAUUCCCCGACGGGGAG 87433754 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 78 : 158693601 158693530 (rev) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 87434341 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 87434385 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 87434386 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 87434412 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 79 : 158693243 158693172 (rev) 76.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 87434699 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 87434743 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 87434744 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 87434770 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUCGUUAGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCGAUUCCCCGACGGGGAG hit 80 : 158686878 158686807 (rev) 72.91 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:C::U+::::AGU GGU A:::: C::G:CU U+A :C::GAG 87441064 UCCUCGUUAGUAUAGU-GGUgAGUAUCCCCGCCUGUCACGCGGGAG-------------- 87441108 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUCGA+UCCC:G::G:GG:+ 87441109 ----ACCGGGGUUCGAUUCCCCGACGGGGAG 87441135 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 81 : 158686220 158686149 (rev) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 87441722 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 87441766 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 87441767 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 87441793 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 82 : 158685863 158685792 (rev) 76.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 87442079 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 87442123 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 87442124 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 87442150 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUCGUUAGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCGAUUCCCCGACGGGGAG hit 83 : 158627478 158627407 (rev) 72.91 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:C::U+::::AGU GGU A:::: C::G:CU U+A :C::GAG 87500464 UCCUCGUUAGUAUAGU-GGUgAGUAUCCCCGCCUGUCACGCGGGAG-------------- 87500508 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUCGA+UCCC:G::G:GG:+ 87500509 ----ACCGGGGUUCGAUUCCCCGACGGGGAG 87500535 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGUUGCCUUCCAAGCAGUUGACCCGGGCUCGAUUCCCGCCCAACGCA hit 84 : 158626824 158626753 (rev) 55.93 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: : :G:CU +AA:C: :+G 87501118 GCGUUGGUGGUAUAGU-GGUgAGCAUAGUUGCCUUCCAAGCAGUUG-------------- 87501162 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C CGGG UCGA+UCCCG C::::GCA 87501163 ----ACCCGGGCUCGAUUCCCGCCCAACGCA 87501189 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUCGGCUGUUAACCGAAAGGUUGGUGGUUCGAGCCCACCCAGGGACG hit 85 : 158614732 158614659 (rev) 82.22 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GCG:U:G:CU U+AA:C:A:AG 87513210 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUCGGCUGUUAACCGAAAG-------------- 87513255 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G:G:C+ 87513256 ----GuUGGUGGUUCGAGCCCACCCAGGGACG 87513283 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGCUAGGAUUCGGCGCUUUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 86 : 158608746 158608675 (rev) 72.31 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GG +A:G:: C:G::CU U+A ::C:G G 87519196 UCCCUGGUGGUCUAGU-GGCuAGGAUUCGGCGCUUUCACCGCCGCG-------------- 87519240 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 87519241 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 87519267 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCCGUAGUGUAGUGGUUAUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCGGAAACA hit 87 : 158586354 158586282 (rev) 87.37 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CCGU+G:::AGU GGU+A:::CG:U:G:CUC +A :C:A:AG 87541588 GUUUCCGUAGUGUAGU-GGUuAUCACGUUCGCCUCACACGCGAAAG-------------- 87541632 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCC:GGUUCGAA CC:GGCGG:::CA 87541633 ----GuCCCCGGUUCGAAACCGGGCGGAAACA 87541660 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUGGACGAGCGCGCUGGACUUCUAAUCCAGAGGUUCCGGGUUCGAGUCCCGGCAGAGAUG hit 88 : 156328266 156328193 (rev) 76.27 bits (((((((,,<<<<_______.._>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU..AggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 :C:C:GUGGC:CA U GG AG:GCGCUGGACU +AAUCCAGAG 89799676 GUCUCUGUGGCGCAAU-GGAcgAGCGCGCUGGACUUCUAAUCCAGAG------------- 89799721 >>>>>,.,<<<<<_______>>>>>))))))): 59 gggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ CCGGGUUCGA UCCCGGC:G:G: + 89799722 -----GuUCCGGGUUCGAGUCCCGGCAGAGAUG 89799749 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGGGGUGUAGAUCAGUGGUAGGGCGCACGCUUAGCAUGCAUGAGGCCCUGGGUCAAUCCCCAGCACCUCCA hit 89 : 147234034 147233964 (rev) 48.19 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G: :::GU+G CAGU GGUAG CGC: G: U +A :C :GAG 98893908 GGGGGUGUAGAUCAGU-GGUAGGGCGCACGCUUAGCAUGCAUGAG--------------- 98893951 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G CC:GGG UC A+ CCC:GC::: :CA 98893952 ---GcCCUGGG-UCAAUCCCCAGCACCUCCA 98893978 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGAUUUGUGGUCCAGUGGUAGAAUUCUCACCGCCUGCAUAGGAGACCCUGGUUUAAUUCCUGGCCAAUGCA hit 90 : 146944923 146944853 (rev) 21.59 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G ::: GUG:: CAGU GGUAG :: C : C C ++ : GAG 99183019 GGAUUUGUGGUCCAGU-GGUAGAAUUCUCACCGCCUGCAUAGGAG--------------- 99183062 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCC GGUU A+UCC GGC ::: CA 99183063 ---ACCCUGGUUUAAUUCCUGGCCAAUGCA 99183089 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGCUAGCGCGUUUGGCUGUUAACUAAAAGGUUGGUGGUUCGAACCCACCCAGAGGCG hit 91 : 146928453 146928380 (rev) 71.41 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G C:C:GUGGC:CA U+GG +AG:GCG:U: :CU U+AA: :A:AG 99199489 GUCUCUGUGGCGCAAUCGGCuAGCGCGUUUGGCUGUUAACUAAAAG-------------- 99199534 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGAA CC:::C:G:G C+ 99199535 ----GuUGGUGGUUCGAACCCACCCAGAGGCG 99199562 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCCGUAGUGUAGUGGUUAUCACGUUCGCCUCACACGCGUAAAGGUCCCCGGUUCGAAACCGGGCGGAAACA hit 92 : 146900743 146900670 (rev) 77.13 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>.>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCc.agAGggccugcUUUggg 58 G:::CCGU+G:::AGU GGU+A:::CG:U:G:CUC +A :C: A:AG 99227199 GUUUCCGUAGUGUAGU-GGUuAUCACGUUCGCCUCACACGCGuAAAG------------- 99227244 >>>>>,.,<<<<<_______>>>>>))))))): 59 gggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCC:GGUUCGAA CC:GGCGG:::CA 99227245 -----GuCCCCGGUUCGAAACCGGGCGGAAACA 99227272 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCACUGGUGGUUCAGUGGUAGAAUUCUCGCCUCCCACGCGGGAGACCCGGGUUUAAUUCCCGGUCAAGAUA hit 93 : 146896862 146896792 (rev) 49.62 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 :::UG:::CAGU GGUAG::: C :G:CUC +A :C: GAG 99231080 GCACUGGUGGUUCAGU-GGUAGAAUUCUCGCCUCCCACGCGGGAG--------------- 99231123 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUU A+UCCCGG::: A 99231124 ---ACCCGGGUUUAAUUCCCGGUCAAGAUA 99231150 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UGCAUGGUUGUCUAGUGGCUAGGAUUCGGUGCUGAAAGCGUCACGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 94 : 146889558 146889487 (rev) 32.28 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C :::U ::C:AGU GG +A:G:: : ::CU AA :: : G 99238384 UGCAUGGUUGUCUAGU-GGCuAGGAUUCGGUGCUGAAAGCGUCACG-------------- 99238428 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG::: G :A 99238429 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 99238455 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: AUCUCCGUGGAGCAAUUGGUUAGCGCGUUCGGCCGUUAACCGGAAAGUUGGUGGUUCGAGCCUACCCAGGGACG hit 95 : 146886712 146886639 (rev) 46.90 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C GUGG :CA UUGGU+AG: CG: :G:C U+AA:C: :A 99241230 AUCUCCGUGGAGCAAUUGGUuAGCGCGUUCGGCCGUUAACCGGAAA-------------- 99241275 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::::GUUCGA C::::C G:G: + 99241276 ----GuUGGUGGUUCGAGCCUACCCAGGGACG 99241303 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGCUAGGAUUCGGCGCUUUCACCGCCUGCAGCUCGAGUUCGAUUCCUGGUCAGGGAA hit 96 : 146881009 146880937 (rev) 40.42 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>.>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCca.gAGggccugcUUUggg 58 :CCC:::UG::C:AGU GG +A:G:: C:G::CU U+A ::C: G 99246933 UCCCUGGUGGUCUAGU-GGCuAGGAUUCGGCGCUUUCACCGCCuGCA------------- 99246978 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GC:C :GUUCGA+UC: G::::GGG:A 99246979 -----GCUCGAGUUCGAUUCCUGGUCAGGGAA 99247005 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGUGCAAUCGGUUAGCGCGUUCCGCUGUUAACCGAAAGCUUGGUGGUUCGAGCCCACCCAGGGAUG hit 97 : 146832272 146832199 (rev) 60.55 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGG::CA U+GGU+AG::CG:U: :CU U+AA: :A:AG 99295670 GUCUCUGUGGUGCAAUCGGUuAGCGCGUUCCGCUGUUAACCGAAAG-------------- 99295715 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :::GGUUCGA CC:::C:G:G: + 99295716 ----CuUGGUGGUUCGAGCCCACCCAGGGAUG 99295743 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCCGUAGUGUAGUGGUUAUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACUGGGCGGAAACA hit 98 : 146661154 146661082 (rev) 82.04 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CCGU+G:::AGU GGU+A:::CG:U:G:CUC +A :C:A:AG 99466788 GUUUCCGUAGUGUAGU-GGUuAUCACGUUCGCCUCACACGCGAAAG-------------- 99466832 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCC::GUUCGAA C::GGCGG:::CA 99466833 ----GuCCCCGGUUCGAAACUGGGCGGAAACA 99466860 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCACUGGUGGUUCAGUGGUAGAAUUCUCGCCUCACACGCGGGACACCCGGGUUCAAUUCCCGGUCAAGGCA hit 99 : 146657263 146657193 (rev) 60.60 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC :::UG:::CAGU GGUAG::: C :G:CUC +A :C: GA 99470679 GCACUGGUGGUUCAGU-GGUAGAAUUCUCGCCUCACACGCGGGAC--------------- 99470722 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUC A+UCCCGG::: GCA 99470723 ---ACCCGGGUUCAAUUCCCGGUCAAGGCA 99470749 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UGCAUGGUUGUCUAGUGGCUAGGAUUCGGUGCUGAAAGAGCCACGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 100 : 146649957 146649886 (rev) 32.32 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C :::U ::C:AGU GG +A:G:: :G: CU AA :C: G 99477985 UGCAUGGUUGUCUAGU-GGCuAGGAUUCGGUGCUGAAAGAGCCACG-------------- 99478029 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG::: G :A 99478030 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 99478056 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: AUCUCCGUGGAGCAAUUGGUUAGCGCGUUCGGCUGUUAACCGGAAAGUUGGUGGUUCGAGCCUACCCAGGGACG hit 101 : 146647103 146647030 (rev) 51.17 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C GUGG :CA UUGGU+AG: CG: :G:CU U+AA:C: :A 99480839 AUCUCCGUGGAGCAAUUGGUuAGCGCGUUCGGCUGUUAACCGGAAA-------------- 99480884 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::::GUUCGA C::::C G:G: + 99480885 ----GuUGGUGGUUCGAGCCUACCCAGGGACG 99480912 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCGUGGUGGUCUAGUGGCUAGGAUUCGGCGCUUUCACCGCCUGCAGCUCGAGUUCGAUUCCUGGUCAGGGAA hit 102 : 146641384 146641312 (rev) 35.29 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>.>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCca.gAGggccugcUUUggg 58 :CC :::UG::C:AGU GG +A:G:: C:G::CU U+A ::C: G 99486558 UCCGUGGUGGUCUAGU-GGCuAGGAUUCGGCGCUUUCACCGCCuGCA------------- 99486603 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GC:C :GUUCGA+UC: G:::: GG:A 99486604 -----GCUCGAGUUCGAUUCCUGGUCAGGGAA 99486630 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUGGGUUAGCGCGUUCGGCUGUUAACCGAAAGGUUGGUGGUUCGAGCCCAUCCAGGGACG hit 103 : 146593170 146593097 (rev) 77.14 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U GGU+AG:GCG:U:G:CU U+AA:C:A:AG 99534772 GUCUCUGUGGCGCAAUGGGUuAGCGCGUUCGGCUGUUAACCGAAAG-------------- 99534817 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGUUCGA CC: :C:G:G:C+ 99534818 ----GuUGGUGGUUCGAGCCCAUCCAGGGACG 99534845 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCACAAUCGGUUAGAGCGUUCGGCUGUUAAUCUAAAGGUUGGUGGCUAGAACCCACUGAGGGACG hit 104 : 146574548 146574475 (rev) 41.70 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C: UGGC CA U+GGU+AG GCG:U G CU U+AA C A:AG 99553394 GUCUCUGUGGCACAAUCGGUuAGAGCGUUCGGCUGUUAAUCUAAAG-------------- 99553439 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::GG U GAA CC:: :G:G:C+ 99553440 ----GuUGGUGGCUAGAACCCACUGAGGGACG 99553467 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UGUCUGGUGGUCAAGUGGCUAGGAUUUGGCGCUUUCACUGCCGCGGCCCGCGUUCGAUUCCCGGUCAGGGAA hit 105 : 146524226 146524155 (rev) 41.66 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C:::UG::C AGU GG +A G:: :G: CU U+A :C: G 99603716 UGUCUGGUGGUCAAGU-GGCuAGGAUUUGGCGCUUUCACUGCCGCG-------------- 99603760 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCG GUUCGA+UC CGG:::G :A 99603761 ----GCCCGCGUUCGAUUCCCGGUCAGGGAA 99603787 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCAUGAUCGUAUAGUGGUUAGUACUCUGCGCUGUGGCCGCAGCAACCUCGGUUCGAAUCCGAGUCACGGCA hit 106 : 146518426 146518355 (rev) 61.06 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC :::U G:::AGU GGU+A:::C CUG::CU U + ::CAG 99609516 GCCAUGAUCGUAUAGU-GGUuAGUACUCUGCGCUGUGGCCGCAGCA-------------- 99609560 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC::GGUUCGAAUCC::G::: GGCA 99609561 ----ACCUCGGUUCGAAUCCGAGUCACGGCA 99609587 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCAUUCGGCUGUUAACCGAAAGGUUGGUGGUUCGAGCCCACCCAGGGACG hit 107 : 146122956 146122883 (rev) 80.50 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GC :U:G:CU U+AA:C:A:AG 100004986 GUCUCUGUGGCGCAAUCGGUuAGCGCAUUCGGCUGUUAACCGAAAG-------------- 100005031 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G:G:C+ 100005032 ----GuUGGUGGUUCGAGCCCACCCAGGGACG 100005059 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCAUUCGGCUGUUAACCGAAAGGUUGGUGGUUCGAGCCCACCCAGGGACG hit 108 : 145960914 145960841 (rev) 80.50 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GC :U:G:CU U+AA:C:A:AG 100167028 GUCUCUGUGGCGCAAUCGGUuAGCGCAUUCGGCUGUUAACCGAAAG-------------- 100167073 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G:G:C+ 100167074 ----GuUGGUGGUUCGAGCCCACCCAGGGACG 100167101 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCACAAUCGGUUAGCUUGUUCGGCUGUUAAUCUAGAGGUUGGUGGUUAGAGCCCACUGAGGGAUG hit 109 : 145548980 145548907 (rev) 34.27 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C: UG: CA U+GGU+AG :G U G CU U+AA C A AG 100578962 GUCUCUGUGGCACAAUCGGUuAGCUUGUUCGGCUGUUAAUCUAGAG-------------- 100579007 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::GGUU GA CC:: :G:G: + 100579008 ----GuUGGUGGUUAGAGCCCACUGAGGGAUG 100579035 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUUGCGCAAUCAGCGCGUUUGGCUGUUAACAGAAAGGCUGGUGGUCCGAGCCCAACCAGGGACU hit 110 : 145487401 145487332 (rev) 27.14 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G:C:C:GU GC:CA U+ AG:GCG:U :CU U+AA: A:AG 100640541 GUCUCUGUUGCGCAAUC---AGCGCGUUUGGCUGUUAACAGAAAG--------------- 100640582 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G : :GGU CGA CC: :C:G:G:C 100640583 ---GcUGGUGGUCCGAGCCCAACCAGGGACU 100640610 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCUUGGUGGUCUAGUGGCUAGGAUUCGGUGCUUUCACCUGUGCGGCCCGGGUUCAAUUCCCGAUGAAGGAA hit 111 : 145478948 145478877 (rev) 43.40 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CC:: :UG::C:AGU GG +A:G:: C ::CU U+A :: G G 100648994 UCCUUGGUGGUCUAGU-GGCuAGGAUUCGGUGCUUUCACCUGUGCG-------------- 100649038 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GC CGGGUUC A+UCCCG : ::GG:A 100649039 ----GCCCGGGUUCAAUUCCCGAUGAAGGAA 100649065 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCGUGAUCGUAUAGUGGUUAGUACUCUGCGUUGUGGCCGCAGCAACCUCGGUUCGAAUCCGAGUCACGGCA hit 112 : 145472763 145472692 (rev) 64.60 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC::::U G:::AGU GGU+A:::C CUG:: U U + ::CAG 100655179 GCCGUGAUCGUAUAGU-GGUuAGUACUCUGCGUUGUGGCCGCAGCA-------------- 100655223 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC::GGUUCGAAUCC::G::::GGCA 100655224 ----ACCUCGGUUCGAAUCCGAGUCACGGCA 100655250 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGUUCCAUGGUGUAAUGGUAAGCACUCUGGACUCUGAAUCCAGCGAUCCGAGUUCGAGUCUCGGUGGAACCU hit 113 : 145435300 145435229 (rev) 68.81 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C CUGGACUCU AAUCCAG G 100692642 GGUUCCAUGGUGUAAU-GGUaAGCACUCUGGACUCUGAAUCCAGCG-------------- 100692686 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCG:GUUCGA UC:CGG:GG:::C 100692687 ----AUCCGAGUUCGAGUCUCGGUGGAACCU 100692713 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUCAGUGGUUUUAGUGGUGGAAUUCCUGCCUCCCAUGCACGAGAUCCGUGUUCAACUCCUGGUUGGUGCA hit 114 : 145414656 145414585 (rev) 31.00 bits (((((((,,<<<<.________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCcc.AGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC :C::UG:::: AGU GGU :::: C :G:CUC +A :C: GAG 100713286 GCGUCAGUGGUUUuAGU-GGUGGAAUUCCUGCCUCCCAUGCACGAG-------------- 100713330 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC :GUUC A UC: GG::G: GCA 100713331 ----AUCCGUGUUCAACUCCUGGUUGGUGCA 100713357 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGUUCCAUGGUGUAAUGGUGACCACUUUGGACUCUGAAUACAGUGAUCAGAGUUCAAGUCUCACUGGAACCU hit 115 : 143983908 143983837 (rev) 39.98 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:: A U GGU A ::C UG ACUCU AAU CA +G 102144034 GGUUCCAUGGUGUAAU-GGUgACCACUUUGGACUCUGAAUACAGUG-------------- 102144078 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G:GUUC A UC:C :GG:::C 102144079 ----AUCAGAGUUCAAGUCUCACUGGAACCU 102144105 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUCGGCUGUUAACUGAAAGGUUAGUGGUUCGAGCCCACCCGGGGACG hit 116 : 143708299 143708226 (rev) 70.42 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GCG:U: :CU U+AA: :A:AG 102419643 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUCGGCUGUUAACUGAAAG-------------- 102419688 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G:G:C+ 102419689 ----GuUAGUGGUUCGAGCCCACCCGGGGACG 102419716 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGUUAGGAUUCGGCGCUCUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 117 : 143147991 143147920 (rev) 76.59 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GGU+A:G:: C:G::CUCU+A ::C:G G 102979951 UCCCUGGUGGUCUAGU-GGUuAGGAUUCGGCGCUCUCACCGCCGCG-------------- 102979995 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 102979996 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 102980022 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUAUAGUGGUGAGCAUAGCUGCCUUCCAAGCAGUUGACCCGGGUUCGAUUCCCGGCCAACGCA hit 118 : 143146622 143146551 (rev) 73.24 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GC::::GUG:: :AGU GGU A: :: :::G:CU +AA:C:::+G 102981320 GCGUUGGUGGUAUAGU-GGUgAGCAUAGCUGCCUUCCAAGCAGUUG-------------- 102981364 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUCGA+UCCCGGC::::GCA 102981365 ----ACCCGGGUUCGAUUCCCGGCCAACGCA 102981391 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCGUGAUCGUAUAGUGGUUAGUACUCUGCGUUGUGGCCGCAGCAACCUCGGUUCGAAUCCGAGUCACGGCA hit 119 : 143145639 143145568 (rev) 64.60 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 GCC::::U G:::AGU GGU+A:::C CUG:: U U + ::CAG 102982303 GCCGUGAUCGUAUAGU-GGUuAGUACUCUGCGUUGUGGCCGCAGCA-------------- 102982347 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC::GGUUCGAAUCC::G::::GGCA 102982348 ----ACCUCGGUUCGAAUCCGAGUCACGGCA 102982374 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCCGGCUAGCUCAGUCGGUAGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCG hit 120 : 143144281 143144209 (rev) 80.45 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GCCC++:U+GC:CAGU+GGUAG:GC :::GACUCU+AAUC::: G 102983661 GCCCGGCUAGCUCAGUCGGUAGAGCAUGAGACUCUUAAUCUCAGG--------------- 102983705 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C::GGGUUCGA CCC:::++GGGC+ 102983706 ---GuCGUGGGUUCGAGCCCCACGUUGGGCG 102983733 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGUUCCAUGGUGUAAUGGUGAGCACUUUGGACUCUGAAUACAGUGAUCAGAGUUCAAGUCUCACUGGGACCU hit 121 : 143128078 143128007 (rev) 44.37 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C UG ACUCU AAU CA +G 102999864 GGUUCCAUGGUGUAAU-GGUgAGCACUUUGGACUCUGAAUACAGUG-------------- 102999908 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G:GUUC A UC:C :GG:::C 102999909 ----AUCAGAGUUCAAGUCUCACUGGGACCU 102999935 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGUUCCAUGGUGUAAUGGUGAGCACUUUGGACUCUGAAUACAGUGAUCAGAGUUCAAGUCUCACUGGGACCU hit 122 : 142592329 142592258 (rev) 44.37 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UGG:::A U GGU A:::C UG ACUCU AAU CA +G 103535613 GGUUCCAUGGUGUAAU-GGUgAGCACUUUGGACUCUGAAUACAGUG-------------- 103535657 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G:GUUC A UC:C :GG:::C 103535658 ----AUCAGAGUUCAAGUCUCACUGGGACCU 103535684 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUUGACUGUUAACUGAAAGGUUGGUGGUGCAAGCCCAUCCAGGGAUG hit 123 : 142380049 142379976 (rev) 49.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGGC:CA U+GGU+AG:GCG:U CU U+AA A:AG 103747893 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUUGACUGUUAACUGAAAG-------------- 103747938 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGU C A CC: :C:G:G: + 103747939 ----GuUGGUGGUGCAAGCCCAUCCAGGGAUG 103747966 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUUGACUGUUAACUGAAAGGUUGGUGGUGCAAGCCCAUCCAGGGAUG hit 124 : 142199820 142199747 (rev) 49.94 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C:GUGGC:CA U+GGU+AG:GCG:U CU U+AA A:AG 103928122 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUUGACUGUUAACUGAAAG-------------- 103928167 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ : :GGU C A CC: :C:G:G: + 103928168 ----GuUGGUGGUGCAAGCCCAUCCAGGGAUG 103928195 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCACAAUCGGUUAGCGCGUUCGGCUGUUAAUCUAGAGGUUGGUGGUUAGAGCCCACUGAGGGAUG hit 125 : 142008243 142008170 (rev) 43.03 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :C:C: UGGC CA U+GGU+AG GCG U G CU U+AA C A AG 104119699 GUCUCUGUGGCACAAUCGGUuAGCGCGUUCGGCUGUUAAUCUAGAG-------------- 104119744 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ ::GGUU GA CC:: :G:G: + 104119745 ----GuUGGUGGUUAGAGCCCACUGAGGGAUG 104119772 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGCAGCAUGGUUUAAUGGGAACACUUAAGGUCAGGAGUCAGGAGACCUGGGUUCUAGUCCCAGAUCUGUCU hit 126 : 107851019 107850949 (rev) 20.63 bits (((((((,,<<<<________>>>>,<<<<<_..______.>>>>>,,<<<<<<<____> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaC..UcuaAA.uCcagAGggccugcUUUgg 57 G+C:: UGG:::A U GG :::C C ::A UC +A U:: GAG 138276923 GGCAGCAUGGUUUAAU-GG--GAACACUUAA-ggUCAGGAgUCAGGAG------------ 138276966 >>>>>>,,<<<<<_______>>>>>))))))): 58 ggggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CC:GGGUUC A UCCC:G ::G+C 138276967 ------ACCUGGGUUCUAGUCCCAGAUCUGUCU 138276993 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGGGGUAUAGCUCAGGUGGUAGAGCAUUUGACUGCAGAUCAAGAGGUCCCCGGUUCAAAUCCGGGUGCCCCCU hit 127 : 93453707 93453635 (rev) 74.35 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G::::::U+GC:CAG UGGUAG:GC U:GACU A+AUC:A AG 152674235 GGGGGUAUAGCUCAGGUGGUAGAGCAUUUGACUGCAGAUCAAGAG--------------- 152674279 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCC:GGUUC AAUCC:GG::::::C 152674280 ---GuCCCCGGUUCAAAUCCGGGUGCCCCCU 152674307 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCCCAGCUAGCUCAGUCGGUAGAGCAUGAGACUCUUAAUCUCAGGGUCAUGGGUUUGAGCCCCACGUUUGGUG hit 128 : 54793532 54793460 (rev) 58.72 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 CC :+:U+GC:CAGU+GGUAG:GC :::GACUCU+AAUC::: G 191334410 GCCCAGCUAGCUCAGUCGGUAGAGCAUGAGACUCUUAAUCUCAGG--------------- 191334454 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C::GGGUU GA CCC:::+: GG + 191334455 ---GuCAUGGGUUUGAGCCCCACGUUUGGUG 191334482 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GGUUCCAUGAUGUAAUGGUGAGCGCUUUGGACUCUGAGUACGGUGAUCAGCGUUCAAGUCUCAGUGGGACCU hit 129 : 16562052 16561981 (rev) 25.47 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:UG::::A U GGU A:::: G ACUCU A U C +G 229565890 GGUUCCAUGAUGUAAU-GGUgAGCGCUUUGGACUCUGAGUACGGUG-------------- 229565934 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C G GUUC A UC C G:GG:::C 229565935 ----AUCAGCGUUCAAGUCUCAGUGGGACCU 229565961 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCUGUGGUGUAGUGGUUAUCAUGUUCGCCUCACACGAGAAAAGUCCCUGAUUCGAGACUGGGUGGGAACG hit 130 : 16387654 16387582 (rev) 52.95 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C::UG::::AGU GGU+A::::G:U: :CUC +A : :A:A 229740288 GUUUCUGUGGUGUAGU-GGUuAUCAUGUUCGCCUCACACGAGAAAA-------------- 229740332 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CCC:::UUCGA :::GG::G:::C+ 229740333 ----GuCCCUGAUUCGAGACUGGGUGGGAACG 229740360 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCGUUGGUGGUUUAGUGGUAGAAUUCUCGCCUCCCAUGCGGGAGACCCGGGUUCAAUUCCCGGCCACUGCA hit 131 : 16385917 16385847 (rev) 69.73 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC ::GUG::::AGU GGUA:::: C :G:CUC +A :C: GAG 229742025 GCGUUGGUGGUUUAGU-GGUAGAAUUCUCGCCUCCCAUGCGGGAG--------------- 229742068 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUC A+UCCCGGC:: GCA 229742069 ---ACCCGGGUUCAAUUCCCGGCCACUGCA 229742095 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUUUCUGUGGUGUAGUGGUUAUUAUGUUCGCUUCACAUAUGAAAGGUCUCUGGUUCGAGACUGCGUGGGAACA hit 132 : 16255313 16255241 (rev) 41.93 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::C::UG:: :AGU GGU+A: ::G:U: UC +A :A:AG 229872629 GUUUCUGUGGUGUAGU-GGUuAUUAUGUUCGCUUCACAUAUGAAAG-------------- 229872673 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+C: ::GUUCGA C:: :::G:::CA 229872674 ----GuCUCUGGUUCGAGACUGCGUGGGAACA 229872701 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GCAUUGGUGGUUCAGUGGUAGAAUUCUCGCCUCCCACGCGGGAGACCCGGGUUCAAUUCCCGGCCAAUGCA hit 133 : 16253585 16253515 (rev) 78.29 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 GC::::GUG:::CAGU GGUAG::: C :G:CUC +A :C: GAG 229874357 GCAUUGGUGGUUCAGU-GGUAGAAUUCUCGCCUCCCACGCGGGAG--------------- 229874400 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCCGGGUUC A+UCCCGGC::::GCA 229874401 ---ACCCGGGUUCAAUUCCCGGCCAAUGCA 229874427 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUGGUCUAGUGGCUAGGAUUCGGCGCUUUCACCGCCGCGGCCCGGGUUCGAUUCCCGGUCAGGGAA hit 134 : 16242926 16242855 (rev) 72.31 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 :CCC:::UG::C:AGU GG +A:G:: C:G::CU U+A ::C:G G 229885016 UCCCUGGUGGUCUAGU-GGCuAGGAUUCGGCGCUUUCACCGCCGCG-------------- 229885060 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG:::GGG:A 229885061 ----GCCCGGGUUCGAUUCCCGGUCAGGGAA 229885087 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGUGCAAUCGGUUAGCGCGUUCGGCUGUUAACCAUAAGGUUGGUGGUUACAGACCACCCAGGGACG hit 135 : 16240047 16239974 (rev) 48.79 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGG::CA U+GGU+AG::CG: G:CU U+AA:C :AG 229887895 GUCUCUGUGGUGCAAUCGGUuAGCGCGUUCGGCUGUUAACCAUAAG-------------- 229887940 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUU A CC:::C:G:G:C+ 229887941 ----GuUGGUGGUUACAGACCACCCAGGGACG 229887968 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: GUCUCUGUGGCGCAAUCGGUUAGCGCGUUCGGCUGUUAACUGAAAGGUUGGUGGUUCGAGCCCACCCAGGGACG hit 136 : 16228234 16228161 (rev) 77.64 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C:C:GUGGC:CA U+GGU+AG:GCG:U: :CU U+AA: :A:AG 229899708 GUCUCUGUGGCGCAAUCGGUuAGCGCGUUCGGCUGUUAACUGAAAG-------------- 229899753 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :::GGUUCGA CC:::C:G:G:C+ 229899754 ----GuUGGUGGUUCGAGCCCACCCAGGGACG 229899781 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UCCCUGGUAGUCUAGUGGUUAGGAUUCCGCGCUCGCCAUCACGACCCGGGUUCGAUUCCUGGUCAGGGAA hit 137 : 7699954 7699885 (rev) 35.51 bits (((((((,,<<<<_______._>>>>,<<<<<____.___>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcu.aAAuCcagAGggccugcUUUggg 58 :CCC:::U+::C:AGU GGU+A:G:: C:G :CUC +A : C: A 238427988 UCCCUGGUAGUCUAGU-GGUuAGGAUUCCGCGCUCGcCAUCACG-A-------------- 238428031 >>>>>,,<<<<<_______>>>>>))))))): 59 gggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 CCC GGUUCGA+UCC GG:::GGG:A 238428032 ------CCCGGGUUCGAUUCCUGGUCAGGGAA 238428057 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr1.fa.gz ----sequence: #0,emb|chr1| ----isReversed: 1 ----hitSequence: UAGAUUGAAGCCAGUUGAUUAGGGUGCUUAGCUGUUAACUAAGUGUUUGUGGGUUUAAGUCCCAUUGGUCUAG hit 138 : 606142 606070 (rev) 22.06 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 ::::::: +:CC AGUUG U+AGGG:GCU:::CU U+AA:::AG+G 245521800 UAGAUUGAAGCC-AGUUGAUuAGGGUGCUUAGCUGUUAACUAAGUG-------------- 245521844 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + :GGGUU A UCCC: :::::::+ 245521845 ----UuUGUGGGUUUAAGUCCCAUUGGUCUAG 245521872 ----endhit ----hitSequence: GGUAAAAUGGCUGAGUGAAGCAUUGGACUGUAAAUCUAAAGACAGGGGUUAAGCCUCUUUUUACCA hit 139 : 606304 606239 (rev) 30.96 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G::::::UGGC::AGU G ::GC :U GACU UAAAUC A:AG 245521638 GGUAAAAUGGCUGAGU-G---AAGCAUUGGACUGUAAAUCUAAAG--------------- 245521678 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C:: GGUU AA CC ::::::::CA 245521679 ---ACAGGGGUU--AAGCCUCUUUUUACCA 245521703 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: UACUCAGUGGUCUAGUGGUUAGGAUUCAGCGCUCCCACCGCCGCAGCCCGGGUUCGAUUCCCGGUCAUGGAA hit 140 : 11713566 11713637 (fwd) 43.39 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 : C :UG::C:AGU GGU+A:G:: C G::CUC +A ::C G 11713566 UACUCAGUGGUCUAGU-GGUuAGGAUUCAGCGCUCCCACCGCCGCA-------------- 11713610 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 GCCCGGGUUCGA+UCCCGG: G :A 11713611 ----GCCCGGGUUCGAUUCCCGGUCAUGGAA 11713637 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: AUUUAUAUAUUAUAAUAUAUAUUAUAUUAUAAUAUAUAUUUAUAUUAUAAUAUAUUAUAUUAUAAUAUAUAUUAUAUUAUUAUAUAUUAUAAUAUAAUAUAUAUUAUAAUAUAUAUUAUAUUAUAAUUUAUAUAUUAUAUAUAUUAUAAUAUAUAUUAUAUUAUAUAUAUAUUUAUAUUAUAAUAUAUAUUAUUAUAUAUUAUAUAUUAUAAUUUAUAUUAUAUUACAAUAUAUAUUAUAAAUA hit 141 : 24614866 24615109 (fwd) 20.03 bits (((((((,,<<<<________>>>>,<<<<<______....................... 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaA....................... 37 :::::::U+ :: A U :: :U::A U UAA+++++++++++++++++++++++ 24614866 AUUUAUAUAUUAUAAU-----AUAUAUUAUAUUAUAAuauauauuuauauuauaauauau 24614920 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 24614921 uauauuauaauauauauuauauuauuauauauuauaauauaauauauauuauaauauaua 24614980 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 24614981 uuauauuauaauuuauauauuauauauauuauaauauauauuauauuauauauauauuua 24615040 ..............................._>>>>>,,<<<<<<<____>>>>>>>,., 38 ...............................AuCcagAGggccugcUUUggggggccG.C 65 +++++++++++++++++++++++++++++++ U::A:+ U U + 24615041 uauuauaauauauauuauuauauauuauauaUUAUAAUU-------UAU--------AuU 24615085 <<<<<_______>>>>>))))))): 66 cCgGGUUCGAaUCCcGgcgggGgCa 90 :::: U C A+ :::::::::::A 24615086 AUAU-UACAAUAUAUAUUAUAAAUA 24615109 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: CCUUCGAUAGCUCAGUUGGUAGAGCGGAGGACUGUAGUGGAUAGGGCGUGGCAAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGA hit 142 : 27248185 27248273 (fwd) 75.85 bits (((((((,,<<<<________>>>>,<<<<<______................_>>>>>, 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaA................AuCcagA 44 :C::C::U+GC:CAGUUGGUAG:GCG::GGACU UA++ +++ + +AUCC::A 27248185 CCUUCGAUAGCUCAGUUGGUAGAGCGGAGGACUGUAGuggauagggcguggcaAUCCUUA 27248244 ,<<<<<<<____>>>>>>>,.,<<<<<_______>>>>>))))))): 45 GggccugcUUUggggggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G G+C:C:GGUUCGA+UCC:G:::G::G:A 27248245 G------------------GuCGCUGGUUCGAUUCCGGCUCGAAGGA 27248273 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGGGGAUUAGCUCAAAUGGUAGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCA hit 143 : 27248617 27248689 (fwd) 63.65 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G: ::::U+GC:CA UGGUAG:GCGCU:G: U +A :C:AGAG 27248617 GGGGGAUUAGCUCAAAUGGUAGAGCGCUCGCUUAGCAUGCGAGAG--------------- 27248661 >>>,.,<<<<<_______>>>>>))))))): 61 gccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+ :CGGG UCGA+ CCCG::::: :CA 27248662 ---GuAGCGGGAUCGAUGCCCGCAUCCUCCA 27248689 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGGCCAGUGGCUCAAUGGAUAAUGCGUCUGACUAAGAAUCAGAAGAUUCCAGCCUUGACUCCUGGCUGGCUCA hit 144 : 30252103 30252175 (fwd) 46.09 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G+:CC:GUGGC :A U GG +A: GCG:::GACU AAUC:::AG 30252103 GGGCCAGUGGCUCAAU-GGAuAAUGCGUCUGACUAAGAAUCAGAAG-------------- 30252147 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + CC:G U GA U C:GGC:GG:+CA 30252148 ----AuUCCAGCCUUGACUCCUGGCUGGCUCA 30252175 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GCUCCAGUGGCGCAAUCGGUUAGCGCGCGGUACUUAUACAGCAGUACAUGCAGAGCAAUGCCGAGGUUGUGAGUUCGAGCCUCACCUGGAGCA hit 145 : 43012211 43012303 (fwd) 68.08 bits (((((((,,<<<<_______._>>>>,<<<<<______..................._>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaA...................AuC 40 GC:CC:GUGGC:CA U+GGU+AG:GCGC:G:ACU +A + + ++ ++ + + +AU: 43012211 GCUCCAGUGGCGCAAUCGGUuAGCGCGCGGUACUUAUAcagcaguacaugcagagcaAUG 43012270 >>>,,<<<<<<<____>>>>>>>,.,<<<<<_______>>>>>))))))): 41 cagAGggccugcUUUggggggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 C:GAG G+ ::G:GUUCGA C:C::C:GG:GCA 43012271 CCGAG------------------GuUGUGAGUUCGAGCCUCACCUGGAGCA 43012303 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GCCUGUGGUCUAGUGGUUAGAAUUCAGUGUUUUCAGUGCUCUAGUCCAGGUUCAAUUCCUGGUCAGGGA hit 146 : 75098583 75098651 (fwd) 23.51 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 CC:: UG:: :AGU GGU+A: :: :G: U U+A :C: + 75098583 GCCUG--UGGUCUAGU-GGUuAGAAUUCAGUGUUUUCAGUGCUCUA-------------- 75098625 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G CC:GGUUC A+UCC:GG ::GG A 75098626 ----GUCCAGGUUCAAUUCCUGGU-CAGGGA 75098651 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGCUGGUUGGUCUAGGGCUAUGAUUCUCACUUAGGGUGCAAGAGGUCCUGGUUCAAAUCCCAGAGGAGCCC hit 147 : 77870130 77870200 (fwd) 30.26 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C: :UG::C:AG GG +A:G:: CU :: U + :: AGAG 77870130 GGCUGGUUGGUCUAG--GGCuAUGAUUCUCACUUAGGGUGCAAGAG-------------- 77870173 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC: GGUUC AAUCCC:G: :G:C 77870174 ----GuCCU-GGUUCAAAUCCCAGAGGAGCCC 77870200 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GCCCUUGUAGUAUAAUUCAAUACUCUGGUCUUGUAAACCAGAAAUGGAGGAUCUCCUCCCCAGGACA hit 148 : 83020936 83021002 (fwd) 22.92 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G CC: GU+G:: A U U A ::C CUGG:CU +AA:CCAGA 83020936 GCCCUUGUAGUAUAAU---UcAAUACUCUGGUCUUGUAAACCAGAA-------------- 83020978 >>>>,,<<<<<_______>>>>>))))))): 60 ggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 :::GG UC UCC:::C :GG CA 83020979 ----AUGGAGGAUC---UCCUCCCCAGGACA 83021002 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGUUCCAUAGUGUAACAGUUAUCAUGUCUGCUUUACACACUGAAGGUCCUGGGUUCAAACUCCAGUGGAACCA hit 149 : 85060416 85060488 (fwd) 53.55 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:::CC:U+::::A GU+A::::G:: G U +A C ::AG 85060416 GGUUCCAUAGUGUAAC-AGUuAUCAUGUCUGCUUUACACACUGAAG-------------- 85060460 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC:GG UUC AA CC:G:GG:::CA 85060461 ----GuCCUGGGUUCAAACUCCAGUGGAACCA 85060488 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGCUGGUUGGUCUAGGGCUAUGAUUCUCACUUAGGGUGCAAAAGGUCCUGGGUUCAAAUCCCAGAGGAGCCC hit 150 : 87314113 87314184 (fwd) 37.04 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G:C: :UG::C:AG GG +A:G:: U :: U + :: A AG 87314113 GGCUGGUUGGUCUAG--GGCuAUGAUUCUCACUUAGGGUGCAAAAG-------------- 87314156 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 G+CC:GGGUUC AAUCCC:G: :G:C 87314157 ----GuCCUGGGUUCAAAUCCCAGAGGAGCCC 87314184 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: UAUAUAUUAUAUAUAAUAGUAUUAUAUAUACUAUUAUAUAUUAUAUAUAUUAUAUAUAUAUAAAAUAUAAUAUAAUAUAUAUAAUAUAUAAUAUUAAUAUUAUAUAUAUAAUAUAAUAUAAUAUAUAAUAUAAUAUAAUAUAUAUAUUAAUAAAAUUAUAUUAAUAUAUAAUAUAUAAUAGUAUAUUAUAUACAUAUAUAAUAUAUACAAUAUAUAAUAUCAUAAUAUAUAAUAUGUAUUAUAUAUAUAA hit 151 : 89715196 89715445 (fwd) 21.56 bits (((((((,,.<<<<________>>>>,<<<<<______...................... 1 GcCcccgUG.GCccAGUUGGUAggGCGcugGaCUcuaA...................... 37 :::::::U+ ::::A U GUA:::: ::: ACU U+A++++++++++++++++++++++ 89715196 UAUAUAUUAuAUAUAAU-AGUAUUAUAUAU-ACUAUUAuauauuauauauauuauauaua 89715253 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 89715254 uauaaaauauaauauaauauauauaauauauaauauuaauauuauauauauaauauaaua 89715313 ............................................................ - ............................................................ - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 89715314 uaauauauaauauaauauaauauauauauuaauaaaauuauauuaauauauaauauauaa 89715373 ........................................_>>>>>,,<<<<<<<____> 38 ........................................AuCcagAGggccugcUUUgg 57 ++ +++++++++++ ++++++++++++++ ++++++++++AUC:::A 89715374 uaguauauuauauacauauauaauauauacaauauauaauAUCAUAAU------------ 89715421 >>>>>>,,<<<<<_______>>>>>))))))): 58 ggggccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 ::::: U U::::::::::::A 89715422 ------AUAUAAUAU---GUAUUAUAUAUAUAA 89715445 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GUUAAGAUGGCAGAGCCCAGCAAUUGCAUAAAUCUUAAAACUUUAUAAUCAGAGGUUCGACUCCUCUUCUUAACA hit 152 : 117876562 117876636 (fwd) 34.03 bits (((((((,,<<<<____..____>>>>,<<<<<_______>>>>>,,<<<<<<<____>> 1 GcCcccgUGGCccAGUU..GGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggg 58 G::::::UGGC: AG + G A :GC :::: CU AAA ::::+ 117876562 GUUAAGAUGGCAGAGCCcaGCAAUUGCAUAAAUCUUAAAACUUUAUA------------- 117876608 >>>>>,.,<<<<<_______>>>>>))))))): 59 gggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 +C:::GGUUCGA UCC:::::::::CA 117876609 -----AuCAGAGGUUCGACUCCUCUUCUUAACA 117876636 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GAGAAGGUCAUAGAGGUUAUGGGAUUGGCUUGAAACCAGUCUCUGGGGGGUUCGAUUCCCUCCUUUUUCA hit 153 : 132350911 132350980 (fwd) 27.00 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 G: ::+GU C :AG GGU+A: G G: :G:CU AAA:C: : 132350911 GAGAAGGU--CAUAGA-GGUuAUGG-GAUUGGCUUGAAACCAGUCU-------------- 132350952 >>>>,.,<<<<<_______>>>>>))))))): 60 ggccG.CcCgGGUUCGAaUCCcGgcgggGgCa 90 + : GGGUUCGA+UCCC :C+:: :CA 132350953 ----CuGGGGGGUUCGAUUCCCUCCUUUUUCA 132350980 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: GGUAAAAUGGCUGAGUAAGCAUUAGACUGUAAUCUGAAAACAGAGGUCAAGACCUCUUUUUACCA hit 154 : 132352421 132352485 (fwd) 26.60 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 G::::::UGGC::AGU ::GC : :GACU U AAUC: :A 132352421 GGUAAAAUGGCUGAGU-----AAGCAUUAGACUGU-AAUCUGAAA--------------- 132352459 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 C:::GG UC A CC:::::::::CA 132352460 ---ACAGAGG-UCAAGACCUCUUUUUACCA 132352485 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: UAGGACGUGGUGUGAUAGGUAGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCAAUUCCUGUAGUUCUAG hit 155 : 132353902 132353973 (fwd) 25.58 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 ::: :C UGG::: U GGUA:::CG :G:A U U +AU:C: AG 132353902 UAGGACGUGGUGUGAUAGGUAGCACGGAGAAUUUUGGAUUCUCAG--------------- 132353946 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G :: GGUUC A+UCC :: G: :::+ 132353947 ---GGAUGGGUUCAAUUCCUGUAGUUCUAG 132353973 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: UAGAACGUGGUGUGGUAGGUCACAUGGAGAAUUUUGGAUUCUCAGGGAUAGGCUCAAUUCCUAUAGUUCUAG hit 156 : 141188774 141188845 (fwd) 20.55 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugGaCUcuaAAuCcagAGggccugcUUUggggg 60 :::::C UG::: GU GGU :::G :G:A U U +AU:C: AG 141188774 UAGAACGUGGUGUGGUAGGUCACAUGGAGAAUUUUGGAUUCUCAG--------------- 141188818 >>>,,<<<<<_______>>>>>))))))): 61 gccGCcCgGGUUCGAaUCCcGgcgggGgCa 90 G :::GG UC A+UCC::: G:::::+ 141188819 ---GGAUAGGCUCAAUUCCUAUAGUUCUAG 141188845 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: UUCCCCUUGGUCUAGUGGUUAGGAUUCAACACUCUCACCGCCGCAGCCCGGGUUUGAUUCCCAGGCAGGGAAG hit 157 : 151421822 151421894 (fwd) 29.75 bits (((((((,,<<<<_______._>>>>,<<<<<_______>>>>>,,<<<<<<<____>>> 1 GcCcccgUGGCccAGUUGGU.AggGCGcugGaCUcuaAAuCcagAGggccugcUUUgggg 59 ::CCC UG::C:AGU GGU+A:G:: C : CUCU+A : G 151421822 UUCCCCUUGGUCUAGU-GGUuAGGAUUCAACACUCUCACCGCCGCA-------------- 151421866 >>>>,,<<<<<_______>>>.>>))))))): 60 ggccGCcCgGGUUCGAaUCCc.GgcgggGgCa 90 GCCCGGGUU GA+UCCC GG GGG::+ 151421867 ----GCCCGGGUUUGAUUCCCaGGCAGGGAAG 151421894 ----endhit ----fastaFile: /projects/null/bio6/zasha/seqs/genomes/human/chr2.fa.gz ----sequence: #0,emb|chr2| ----isReversed: 0 ----hitSequence: CGUAAAAUGGCUGAGUAAGGCAUUAGACUGUAAAUCUAAAGACAGAGGCUAAACCUCUUUUUACCA hit 158 : 156322834 156322899 (fwd) 27.57 bits (((((((,,<<<<________>>>>,<<<<<_______>>>>>,,<<<<<<<____>>>> 1 GcCcccgUGGCccAGUUGGUAggGCGcugG