cdd: 8 xref: smart00014 gene: acidPPc desc: Acid phosphatase homologues; num: 25 15674037 15895703 16079023 19746769 18310008 57865472 15894576 55820314 24380076 16080706 42783952 52082168 24379343 15894029 15675663 50365282 42560802 52081538 67078258 42781737 78044882 52080660 42519287 15895661 56419968 cdd: 79 xref: smart00089 gene: PKD desc: Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases. num: 4 18309155 42782589 42779695 67078023 cdd: 81 xref: smart00091 gene: PAS desc: PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. num: 9 56420162 52081143 20807184 15894190 78043169 15893728 20807566 56419479 18309189 cdd: 242 xref: smart00267 gene: DUF1 desc: Domain of Unknown Function with GGDEF motif; Domain apparently occurring exclusively in eubacteria. Likely to participate in prokaryotic signalling processes. Unknown function. num: 12 28210553 15895847 52079889 16080017 42784400 15895837 15895959 46906776 52082514 16077495 50812223 42783095 cdd: 262 xref: smart00287 gene: SH3b desc: Bacterial SH3 domain homologues; num: 32 42519288 16079812 23100540 20807361 18309434 57867127 16080650 78043744 56964861 20808951 16077923 42518242 70726290 56421790 81428472 15927518 42518419 28377553 46907749 18310213 42781106 42518243 18310336 56421689 28378624 24379086 23099854 70727332 18309588 52081237 44004541 56963840 cdd: 293 xref: smart00319 gene: TarH desc: Homologues of the ligand binding domain of Tar; Homologues of the ligand binding domain of the wild-type bacterial aspartate receptor, Tar. num: 6 16080175 42781154 16080178 42779698 52081612 16080176 cdd: 318 xref: smart00345 gene: HTH_GNTR desc: helix_turn_helix gluconate operon transcriptional repressor; num: 25 73662165 15613625 15893482 28212145 52081530 56962042 52082568 56965676 18310347 15613149 13507978 52082380 28211609 31544666 24379501 52078674 12044953 70726022 15613727 46908475 16080098 55821292 28210521 15927508 15613214 cdd: 327 xref: smart00354 gene: HTH_LACI desc: helix_turn _helix lactose operon repressor; num: 4 16081139 42561276 55821708 56962074 cdd: 373 xref: smart00418 gene: HTH_ARSR desc: helix_turn_helix, Arsenical Resistance Operon Repressor; num: 130 57865828 56963582 73662913 15004806 56962622 52079221 15895510 23098300 15614649 70725101 15004735 47459281 58338143 56962050 42779758 18450316 28377081 81427828 18450318 15613240 52082014 23098855 57865616 42781456 42783898 24380441 29376917 56421759 70725890 52080496 56965473 23098417 57867654 42519749 56965152 56899921 18310013 58336374 78042720 23097780 10956384 23099880 52080570 78043827 15615558 52081280 19747003 21392957 20808857 56962946 23097732 28379652 25012103 21392880 42518470 56962609 42518315 42782571 21392842 29374761 56420669 24380025 18311286 15613257 42783555 57866129 16077606 73662045 44004484 16078972 57865831 16077366 78043737 15673676 81427771 44004558 67078026 20808823 15613508 42783568 42783565 15613445 16077456 10956356 56419115 42782816 28378436 22537408 46906341 73663693 56419941 46908665 42779740 70725115 42784034 15615562 15673588 56421295 67078293 28377044 52078675 42783385 42782082 18450342 70725111 15675903 58338027 42782492 28379359 76787805 56962617 81428040 44004499 56963153 70725104 15927347 15927719 42781145 52078918 56419284 56418886 57865626 18309819 28378915 56419122 16080432 56419119 15616599 15612954 67077992 cdd: 375 xref: smart00420 gene: HTH_DEOR desc: helix_turn_helix, Deoxyribose operon repressor; num: 15 42783423 56964561 23099402 42783893 56421367 16080054 73662501 78044058 56963451 57867005 20807459 78043601 15927144 29375605 52081500 cdd: 424 xref: smart00470 gene: ParB desc: ParB-like nuclease domain; Plasmid RK2 ParB preferentially cleaves single-stranded DNA. ParB also nicks supercoiled plasmid DNA preferably at sites with potential single-stranded character, like AT-rich regions and sequences that can form cruciform structures. ParB also exhibits 5-->3 exonuclease activity. num: 9 29376789 28211565 15902479 76786905 29374764 20808479 20808468 15081481 20808442 cdd: 425 xref: smart00471 gene: HDc desc: Metal dependent phosphohydrolases with conserved 'HD' motif. Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit). num: 13 42783458 23099439 28211674 23097991 46907042 15828806 29376381 73663211 15901578 15613890 15903633 78042934 52081113 cdd: 803 xref: pfam00237 gene: Ribosomal_L22 desc: Ribosomal protein L22p/L17e. This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. num: 44 15900150 12045009 73661977 42779196 15902238 28212172 78044381 20808655 16077189 58336635 15674076 81429372 42518434 54020075 31544260 18311382 24380364 52078614 46908799 39938691 23097579 22536248 19745246 50364943 42561265 71894648 76787677 29374856 15927825 57867712 26554460 15896378 47459075 56961937 15612702 56418646 13507909 13357796 25010138 15674292 28377837 70725808 15829054 55821900 cdd: 817 xref: pfam00252 gene: Ribosomal_L16 desc: Ribosomal protein L16. num: 35 15927823 15612704 42518436 23097581 78043657 50364945 55821898 19745248 20808653 57867710 39938693 76787110 15896376 15902240 15674294 42561263 24380362 28212169 22536250 16077191 56961939 56418648 42779198 28377839 15674074 29374858 18311380 81429370 52078616 15900152 73661979 46908797 70725810 25010140 58336637 cdd: 834 xref: pfam00269 gene: SASP desc: Small, acid-soluble spore proteins, alpha/beta type. num: 46 56419164 23100091 52079462 16079053 52081450 20808192 52079894 15615764 56961855 20808898 56965166 16078411 78044462 42780024 23099652 20807932 78043395 15614313 42782199 56965165 15613701 16080009 23097509 15894898 56419469 42783829 56421329 20807277 52078540 16078040 42779123 42780498 18311046 42781133 56964513 67078144 78043541 28563919 56418573 18310885 15612623 16077113 18310405 15895632 18311143 20807933 cdd: 938 xref: pfam00375 gene: SDF desc: Sodium:dicarboxylate symporter family. num: 11 73661817 52079507 18309743 42780629 56421069 16078086 28379296 81428062 15895059 16077303 52081534 cdd: 1005 xref: pfam00444 gene: Ribosomal_L36 desc: Ribosomal protein L36. num: 19 42779215 57867678 13507927 12045027 73661995 20808636 56961956 13357814 50364962 70725826 15612722 15927807 52078634 15896359 16077208 46908781 23097597 56418665 18311362 cdd: 1014 xref: pfam00453 gene: Ribosomal_L20 desc: Ribosomal protein L20. num: 44 22537529 55821143 56421251 23099605 25011494 15902907 81429006 56964452 42519516 28378231 42783750 52081387 15673824 19745887 70726248 16079937 18310874 15895626 31544563 15674848 39939228 29375500 71894618 73662395 28211882 57867161 15615700 54020114 24379170 26554367 15900838 15828732 46908013 76788134 42560773 20808117 47459462 15927257 58337801 13507856 13357789 78044004 50365006 12045050 cdd: 1022 xref: pfam00461 gene: Peptidase_S26 desc: Signal peptidase I. num: 87 56419215 55821738 28379329 18311277 22537862 16079388 15895904 15900321 18309496 15675668 56964051 78044888 15675234 23098993 31544461 52079110 29376232 15674240 76787897 52080041 42782931 57866485 21392959 42782178 25011807 76787808 42782167 56963240 18309297 46907497 28379330 54019987 71894064 18310535 70727661 16077469 46907498 15926553 19746774 15926554 15614693 29375442 67078082 10956449 20806565 42780463 73663120 29375687 42779608 22537103 23098635 18309579 24379616 42519383 19745302 19746204 70726987 42780317 42519216 23098255 23098845 15829101 70726986 29377531 15895037 24380230 18309412 28379971 73663119 15902408 81427709 57865986 23098756 16078505 52079529 28210939 58338153 57866486 76788276 55821151 15613593 16078113 46907496 52080999 56419738 81428606 25010986 cdd: 1040 xref: pfam00479 gene: G6PD_N desc: Glucose-6-phosphate dehydrogenase, NAD binding domain. num: 21 57866979 70726412 56420869 56963689 28379186 15903165 52080918 23100393 58336750 15901104 28211501 73662557 15674202 16079442 42518566 15927086 81427995 20807485 42782465 29375586 46908206 cdd: 1143 xref: pfam00584 gene: SecE desc: SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex. num: 9 15926212 16077168 42779176 46906478 56418626 52078594 23097560 78044057 20808674 cdd: 1248 xref: pfam00692 gene: dUTPase desc: dUTPase. dUTPase hydrolyses dUTP to dUMP and pyrophosphate. num: 33 15673010 16078829 15899969 81429296 19745371 46907922 76788466 15672437 15672158 24378823 15673390 58336683 70727367 15674420 16079060 39938650 28210898 31544411 28377482 42518490 18309660 15894704 22536294 15902067 26553553 78043524 15894493 20807831 55821796 56964611 18310453 29374697 25010183 cdd: 1380 xref: pfam00825 gene: Ribonuclease_P desc: Ribonuclease P. num: 7 16081157 26554488 13508420 31544212 12045324 20809129 42561575 cdd: 1427 xref: pfam00872 gene: Transposase_mut desc: Transposase, Mutator family. num: 57 29375204 57867486 29374776 55821914 57867185 56419412 57867489 56965034 56962977 70726009 56962935 29377271 29376391 31544631 70726101 56962597 29376695 70725340 29377944 56418880 70727266 29377663 29376403 70726611 26554410 70727572 70726907 70727574 57866844 29377117 70727034 31544677 31544853 70727576 29377556 29375002 29376681 70726497 29375152 28894871 55820896 29376693 29377854 55820887 57865374 29377857 31544455 31544369 15673186 55820420 22536628 31544678 55820890 55821065 70726006 70726614 70726092 cdd: 1448 xref: pfam00893 gene: Multi_Drug_Res desc: Small Multidrug Resistance protein. This family is the Small Multidrug Resistance (SMR) family. Several members have been shown to export a range of toxins, including ethidium bromide and quaternary ammonium compounds, through coupling with proton influx. num: 7 16078374 33416259 29377812 52080336 16078793 29374999 16080502 cdd: 1464 xref: pfam00909 gene: Ammonium_transp desc: Ammonium Transporter Family. num: 26 55820577 52079583 25011544 78044978 46907744 29375165 76788096 56965686 13357777 15927618 57867383 42780343 28377266 56419987 15673574 16080704 24380036 13357778 23098666 15893970 52082175 22537578 58336804 73663597 15616396 70725990 cdd: 1634 xref: pfam01084 gene: Ribosomal_S18 desc: Ribosomal protein S18. num: 43 55821724 15829080 50364897 54020444 19746762 15674171 25011796 24380218 15675656 20809108 42784668 15896953 57865985 39938497 42560585 56965862 46906277 23100932 18311622 42518093 50812313 15901383 70727625 58336363 13507969 15616610 29374670 52082634 28376983 26553570 15926068 47459060 73663680 81427625 12044944 13358116 76786818 56422015 15903437 31544817 22537851 78043292 71894545 cdd: 1714 xref: pfam01165 gene: Ribosomal_S21 desc: Ribosomal protein S21. num: 31 42783436 78043650 15613917 24379273 70726342 19745863 56963434 55821467 23099417 81428483 28378615 76788105 56421032 52081088 58337487 46907697 15901268 20807445 25011541 42519250 18311005 15927155 15903314 15894570 15672222 22537575 57867025 29376911 16079595 15674824 73662490 cdd: 1724 xref: pfam01175 gene: Urocanase desc: Urocanase. num: 12 15614546 42782729 73661881 19746955 15927911 28211916 20806958 56419902 15675840 55821318 56965092 16080987 cdd: 1745 xref: pfam01197 gene: Ribosomal_L31 desc: Ribosomal protein L31. num: 4 52082241 12045112 16080760 13508099 cdd: 1754 xref: pfam01206 gene: UPF0033 desc: Uncharacterized protein family UPF0033. num: 15 52081146 16079703 56420605 23100106 52081148 57867384 56420601 55821818 28563942 42779942 15927619 42779944 73662144 16079706 70725989 cdd: 1756 xref: pfam01208 gene: URO-D desc: Uroporphyrinogen decarboxylase (URO-D). num: 4 78043006 16078076 52079499 24379376 cdd: 1773 xref: pfam01226 gene: Form_Nir_trans desc: Formate/nitrite transporter. num: 4 16080857 28210634 52082421 78043447 cdd: 1790 xref: pfam01245 gene: Ribosomal_L19 desc: Ribosomal protein L19. num: 44 47459263 25010656 81428334 16078667 71894037 70726674 42782932 58337562 78043257 18310690 13358131 19745821 15828938 15674780 15615041 26553556 23098992 15903214 50365356 15926824 15901153 56964052 42560963 15672856 73662835 28210938 29376426 55821188 28378338 12045303 20807904 57866700 24379704 56419737 46908019 52080206 22536722 15895036 31544828 76788495 39938956 54020037 42519384 13508397 cdd: 1846 xref: pfam01301 gene: Glyco_hydro_35 desc: Glycosyl hydrolases family 35. num: 4 29376349 67078211 29376389 29375402 cdd: 1933 xref: pfam01391 gene: Collagen desc: Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxyproline. Collagens are post translationally modified by proline hydroxylase to form the hydroxyproline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. num: 8 76787944 15675046 42781416 57865793 28378969 29376599 76788693 15903446 cdd: 1960 xref: pfam01418 gene: HTH_6 desc: Helix-turn-helix domain, rpiR family. This domain contains a helix-turn-helix motif. The best characterised member of this family is RpiR, a regulator of the expression of rpiB gene. num: 4 50365250 73661430 50364825 50364847 cdd: 2010 xref: pfam01470 gene: Peptidase_C15 desc: Pyroglutamyl peptidase. num: 4 42519847 16077334 58336528 15928276 cdd: 2058 xref: pfam01519 gene: DUF16 desc: Protein of unknown function DUF16. The function of this protein is unknown. It appears to only occur in Mycoplasma pneumoniae. num: 25 13508394 13508243 13507878 13507876 13508149 13507877 13507869 13507749 13507890 13507777 13508022 13507884 13508083 13507839 13508240 13508223 13507752 13508263 13508107 13507833 13508414 13508026 13507866 13507843 13507943 cdd: 2090 xref: pfam01551 gene: Peptidase_M37 desc: Peptidase family M23/M37. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M37 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. num: 24 46908676 42783585 58337489 56965603 56421874 42781027 15828949 16080708 44004362 52082179 15616308 70725484 57867504 15673033 16079194 58337476 70726757 20806695 15925978 73662968 23100416 15896114 42519295 42784452 cdd: 2150 xref: pfam01613 gene: Flavin_Reduct desc: Flavin reductase like domain. This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. VlmR is a flavin reductase that functions in a two-component enzyme system to provide isobutylamine N-hydroxylase with reduced flavin and may be involved in the synthesis of valanimycin. SnaC is a flavin reductase that provides reduced flavin for the oxidation of pristinamycin IIB to pristinamycin IIA as catalysed by SnaA, SnaB heterodimer. This flavin reductase region characterised by enzymes of the family is present in the C-terminus of potential FMN proteins from Synechocystis sp. suggesting it is a flavin reductase domain. num: 4 56421556 56962518 23100325 52080401 cdd: 2172 xref: pfam01638 gene: DUF24 desc: Transcriptional regulator. Members of this family are predicted to be transcriptional regulators that are related to the pfam01047 family. num: 29 16077416 56965393 23100260 15674153 16079012 73662937 52079292 16080421 52081191 16077594 23100498 42784254 28379497 16077596 56962558 52080644 19746970 16079955 16078440 15894136 16081106 81428142 52081158 29377247 81429043 15613071 73662929 81428988 15615865 cdd: 2188 xref: pfam01654 gene: Bac_Ubq_Cox desc: Bacterial Cytochrome Ubiquinol Oxidase. This family are the alternative oxidases found in many bacteria which oxidise ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II num: 10 46908897 25011826 22537881 42783995 52082420 16080927 16080123 52081560 42781090 76787464 cdd: 2222 xref: pfam01689 gene: Hyratase_decarb desc: Hydratase/decarboxylase. This family consist of various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyses the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase. num: 5 42781221 78044351 78042951 52082278 42781224 cdd: 2228 xref: pfam01695 gene: IstB desc: IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function. num: 9 15927792 26554083 56419319 78043347 26553871 26554001 18450287 26553670 26554169 cdd: 2242 xref: pfam01710 gene: Transposase_14 desc: Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes insertion sequences from Synechocystis PCC 6803 three of which are characterised as homologous to bacterial IS5- and IS4- and to several members of the IS630-Tc1-mariner superfamily. num: 11 15903870 15901838 15902357 15902942 15902766 15903393 15901014 15900233 15902058 15899964 15903082 cdd: 2301 xref: pfam01773 gene: Nucleoside_tra2 desc: Na+ dependent nucleoside transporter. This family consists of nucleoside transport proteins. One member is a purine-specific Na+-nucleoside cotransporter localised to the bile canalicular membrane. One member is a a Na+-dependent nucleoside transporter selective for pyrimidine nucleosides and adenosine it also transports the anti-viral nucleoside analogues AZT and ddC. num: 37 15926015 16080953 73663544 42779752 70727487 57866092 56962067 19746795 42782083 18310266 28211068 70727248 28379587 52081708 25012063 15926198 81427902 52082509 42784244 42781045 18311478 22538206 52082476 81427874 73663384 42784399 42779443 15926322 57866213 42784245 16080271 81428411 23098546 15675687 15614009 16080992 76788462 cdd: 2302 xref: pfam01774 gene: UreD desc: UreD urease accessory protein. UreD is a urease accessory protein. Urease pfam00449 hydrolyses urea into ammonia and carbamic acid. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly. See also UreF pfam01730, UreG pfam01495. num: 8 13357991 15927874 73661568 57867809 55820382 56420461 15612821 42782708 cdd: 2325 xref: pfam01797 gene: Transposase_17 desc: Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli. num: 29 15615405 15614205 15901458 56420786 29375219 18309121 57865653 57867084 28373148 78043375 15615795 15900934 15896768 56965194 23100026 56964941 28373168 56963053 70726897 15616040 15614458 15616028 15612739 15612832 70727596 24379773 56962413 55821779 24378664 cdd: 2337 xref: pfam01809 gene: DUF37 desc: Domain of unknown function DUF37. This domain is found in short (70 amino acid) hypothetical proteins from various bacteria. The domain contains three conserved cysteine residues. A member from Aeromonas hydrophila has been found to have hemolytic activity (unpublished). num: 31 28378933 18311640 15896968 15901701 73662281 29376441 15674519 24380084 55820360 70726135 16080120 42518869 25011681 52081555 57867275 56421399 19745527 56964271 15673654 15927369 15615392 23099142 46907901 42783993 20809128 52081154 76786865 81428729 78043459 15903730 22537732 cdd: 2410 xref: pfam01884 gene: PcrB desc: PcrB family. This family contains proteins that are related to PcrB. The function of these proteins is unknown. num: 10 56418809 73662194 23098213 56962857 52079147 57867386 42779414 16077728 15927480 70726046 cdd: 2414 xref: pfam01888 gene: CbiD desc: CbiD. CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, no functional role has been ascribed to the protein. The CbiD protein has a putative S-AdoMet binding site. It is possible that CbiD might have the same role as CobF in undertaking the C-1 methylation and deacylation reactions required during the ring contraction process. num: 6 78044171 46907413 56420336 15894656 18310208 28210454 cdd: 2420 xref: pfam01894 gene: UPF0047 desc: Uncharacterised protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important. num: 12 16080180 15894194 78045193 20808000 56420369 78045022 18309553 15616060 23100196 20808571 56964567 52081617 cdd: 2489 xref: pfam01964 gene: ThiC desc: ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. num: 10 28210545 56418905 15614496 20807994 78043716 42784386 15896266 18309661 16077944 52079350 cdd: 2502 xref: pfam01977 gene: UbiD desc: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. This family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+. num: 8 78043905 28379391 52078875 56965781 78043702 16077432 81428195 15616492 cdd: 2521 xref: pfam01996 gene: DUF129 desc: Protein of unknown function DUF129. This prokaryotic protein family has no known function. num: 4 20808729 20807261 19745658 15674636 cdd: 2564 xref: pfam02040 gene: ArsB desc: Arsenical pump membrane protein. num: 13 57865832 70725200 70725110 15615561 46907527 15927348 70725103 73663692 57866128 23099879 56962610 16077601 52080495 cdd: 2596 xref: pfam02073 gene: Peptidase_M29 desc: Thermophilic metalloprotease (M29). num: 21 56420675 42779440 70726078 57867328 22537615 18310979 46907942 28211622 76788138 16078509 73662223 25011580 52080046 55820165 23100497 15902298 15927453 15900212 56963895 15614808 81429135 cdd: 2604 xref: pfam02081 gene: TrpBP desc: Tryptophan RNA-binding attenuator protein. num: 7 56420748 78043272 15614210 56963649 16079334 52080786 23099246 cdd: 2710 xref: pfam02195 gene: ParBc desc: ParB-like nuclease domain. num: 4 46907535 29374763 28211560 29376623 cdd: 2898 xref: pfam02388 gene: FemAB desc: FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance. num: 16 70726667 70726533 29376659 57865355 15926954 70725643 15926831 73662680 57866903 73662679 15927989 57866904 55820441 73661796 70726532 15926955 cdd: 2927 xref: pfam02417 gene: Chromate_transp desc: Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP. num: 7 56962363 52082141 56962764 52082142 16080666 56962765 16080665 cdd: 2956 xref: pfam02446 gene: 4a_glucanotrans desc: 4-alpha-glucanotransferase. These enzymes EC:2.4.1.25 transfer a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan. num: 10 15901922 22537585 18311320 76788357 15675245 19746283 55821046 24379950 15903958 25011550 cdd: 3047 xref: pfam02538 gene: Hydantoinase_B desc: Hydantoinase B/oxoprolinase. This family includes N-methylhydaintoinase B which converts hydantoin to N-carbamyl-amino acids, and 5-oxoprolinase EC:3.5.2.9 which catalyses the formation of L-glutamate from 5-oxo-L-proline. These enzymes are part of the oxoprolinase family and are related to pfam01968. num: 4 52080362 52080361 56421428 52078844 cdd: 3077 xref: pfam02570 gene: CbiC desc: Precorrin-8X methylmutase. This is a family Precorrin-8X methylmutases also known as Precorrin isomerase, CbiC/CobH, EC:5.4.1.2. This enzyme catalyses the reaction: Precorrin-8X <=> hydrogenobyrinate. This enzyme is part of the Cobalamin (vitamin B12) biosynthetic pathway and catalyses a methyl rearrangement. num: 6 56420337 28210453 78043271 15894655 46907412 18310209 cdd: 3092 xref: pfam02585 gene: DUF158 desc: Uncharacterised LmbE-like protein, COG2120. num: 6 56963836 56420718 42780737 52080755 16079304 15614245 cdd: 3102 xref: pfam02595 gene: Gly_kinase desc: Glycerate kinase family. This is family of Glycerate kinases. num: 38 25010868 15675716 73661487 81428327 70725632 15672838 20808961 73663283 15896089 70727148 28379635 16081056 46908922 52078505 78045073 56422000 55820712 18309843 23097737 58337040 22536957 15903078 76787169 24379673 57865375 56962519 15928010 15900992 23100241 46909021 29377130 57866361 15926419 19746824 42519176 15613118 42779234 28210424 cdd: 3106 xref: pfam02599 gene: CsrA desc: Global regulator protein family. This is a family of global regulator proteins. This protein is a RNA-binding protein and a global regulator of carbohydrate metabolism genes facilitating mRNA decay. In E. coli CsrA binds the CsrB RNA molecule to form the Csr regulatory system which has a strong negative regulatory effect on glycogen biosynthesis, glyconeogenesis and glycogen catabolism and a positive regulatory effect on glycolysis. In other bacteria such as Erwinia caratovara RmsA has been shown to regulate the production of virulence determinants, such extracellular enzymes. RmsA binds to RmsB regulatory RNA. num: 9 15616179 56964840 16080590 52082072 15895477 23099958 78043288 20807003 56421668 cdd: 3107 xref: pfam02600 gene: DsbB desc: Disulfide bond formation protein DsbB. This family consists of disulfide bond formation protein DsbB from bacteria. The DsbB protein oxidises the periplasmic protein DsbA which in turn oxidises cysteines in other periplasmic proteins in order to make disulfide bonds. DsbB acts as a redox potential transducer across the cytoplasmic membrane and is an integral membrane protein. DsbB posses six cysteines four of which are necessary for it proper function in vivo. num: 10 44004483 56965703 23098618 10956386 52081838 42779900 16079203 56419103 16080400 21392881 cdd: 3109 xref: pfam02602 gene: HEM4 desc: Uroporphyrinogen-III synthase HemD. This family consists of uroporphyrinogen-III synthase HemD EC:4.2.1.75 also known as Hydroxymethylbilane hydrolyase (cyclizing) from eukaryotes, bacteria and archaea. This enzyme catalyses the reaction: Hydroxymethylbilane <=> uroporphyrinogen-III + H(2)O. Some members of this family are multi-functional proteins possessing other enzyme activities related to porphyrin biosynthesis, however the aligned region corresponds with the uroporphyrinogen-III synthase EC:4.2.1.75 activity only. Uroporphyrinogen-III synthase is the fourth enzyme in the heme pathway. Mutant forms of the Uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria in humans a recessive inborn error of metabolism also known as Gunther disease. num: 4 16079866 56965173 16078288 52081193 cdd: 3110 xref: pfam02603 gene: Hpr_kinase desc: HPr Serine kinase. This family consists of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. num: 7 31544920 12044937 13507962 16080553 52082040 23099937 56421617 cdd: 3115 xref: pfam02608 gene: Bmp desc: Basic membrane protein. This is a family of basic membrane lipoproteins form Borrelia and various putative lipoproteins form other bacteria. All of these proteins are outer membrane proteins and are thus antigenic in nature when possessed by the pathogenic members of the family. One protein is a transcriptional activator. num: 7 12044890 18310562 26554042 50812218 16080206 13507791 52079627 cdd: 3121 xref: pfam02614 gene: UxaC desc: Glucuronate isomerase. This is a family of Glucuronate isomerases also known as D-glucuronate isomerase, uronic isomerase, uronate isomerase, or uronic acid isomerase, EC:5.3.1.12. This enzyme catalyses the reactions: D-glucuronate <=> D-fructuronate and D-galacturonate <=> D-tagaturonate. It is not however clear where the experimental evidence for this functional assignment came from and thus this family has no literature reference. num: 6 56962769 20808343 52081820 23097822 16078295 18309134 cdd: 3130 xref: pfam02623 gene: DUF180 desc: Uncharacterized BCR, COG1699. num: 10 16080591 28211374 56964841 78042773 15895478 56421669 23099959 20807002 15616180 52082073 cdd: 3133 xref: pfam02626 gene: AHS2 desc: Allophanate hydrolase subunit 2. This domain forms the second subunit of allophanate hydrolase. In yeast urea amidolyase this domain is found between pfam00289 and pfam00364. num: 17 57866306 50812187 15926395 73662463 70726312 73663311 15927188 52078947 56965532 57867082 70727179 20808035 78042863 15614381 56420036 23100131 42782175 cdd: 3137 xref: pfam02630 gene: SCO1-SenC desc: SCO1/SenC. This family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase. SenC is required for optimal cytochrome c oxidase activity and maximal induction of genes encoding the light-harvesting and reaction centre complexes of R. capsulatus. num: 4 42781342 56420305 16079234 52080683 cdd: 3141 xref: pfam02634 gene: FdhD-NarQ desc: FdhD/NarQ family. Nitrate assimilation protein, NarQ, and FdhD are required for formate dehydrogenase activity. num: 12 15615090 42779732 46908755 42782635 73661936 78043212 52082203 15927860 70725773 56418996 16080724 56962676 cdd: 3145 xref: pfam02638 gene: DUF187 desc: Uncharacterized BCR, COG1649. num: 4 42781556 52080500 56963033 16078889 cdd: 3156 xref: pfam02649 gene: DUF198 desc: Uncharacterized ACR, COG1469. num: 8 16077403 23099143 70727422 15926244 57866138 15613561 73663461 52079194 cdd: 3157 xref: pfam02650 gene: DUF199 desc: Uncharacterized BCR, COG1481. num: 4 52082019 13507980 12044955 16080528 cdd: 3177 xref: pfam02670 gene: DXP_reductoisom desc: 1-deoxy-D-xylulose 5-phosphate reductoisomerase. This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyses the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway. num: 14 52080258 78045003 18310676 46907543 42782912 56419790 26553600 15895071 16078718 31544296 28210954 20807849 56964001 15614984 cdd: 3188 xref: pfam02681 gene: DUF212 desc: Divergent PAP2 family. This family is related to the pfam01569 family (personal obs: C Yeats). num: 9 52081697 16080259 42782623 15615964 23099802 46908559 56964685 15672981 56419884 cdd: 3189 xref: pfam02682 gene: AHS1 desc: Allophanate hydrolase subunit 1. This family is the first subunit of allophanate hydrolase. num: 16 42782176 73663312 78044107 15614380 15927189 50812186 52078946 23100133 20808036 57867083 70727180 56420035 70726311 56965533 15926394 73662462 cdd: 3190 xref: pfam02683 gene: DsbD desc: Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family. num: 6 52078813 16078856 20807504 56419874 52080415 56419435 cdd: 3201 xref: pfam02694 gene: UPF0060 desc: Uncharacterized BCR, YnfA/UPF0060 family. num: 6 52079286 15927919 70725718 15615307 56420627 16077879 cdd: 3203 xref: pfam02696 gene: UPF0061 desc: Uncharacterized ACR, YdiU/UPF0061 family. num: 5 56418971 56962901 42782573 18309017 15616501 cdd: 3205 xref: pfam02698 gene: DUF218 desc: Uncharacterized ACR, COG1434. num: 6 42519211 70725701 78045108 73661853 24378805 52080430 cdd: 3226 xref: pfam02719 gene: Polysacc_synt_2 desc: Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein, mannosyl-transferase, and several putative epimerases (e.g. WbiI). num: 7 16080488 15925856 70725392 52081989 73661372 42784440 23100351 cdd: 3293 xref: pfam02786 gene: CPSase_L_D2 desc: Carbamoyl-phosphate synthase L chain, ATP binding domain. Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesise carbamoyl phosphate. See pfam00988. The small chain has a GATase domain in the carboxyl terminus. See pfam00117. The ATP binding domain (this one) has an ATP-grasp fold. num: 5 25011474 70725904 24378577 76787530 22537509 cdd: 3544 xref: pfam03050 gene: Transposase_25 desc: Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens. num: 5 56418830 56421847 56421198 15902368 15674346 cdd: 3793 xref: cd00133 gene: PTS_IIB_lac desc: PTS system, lactose/cellobiose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation num: 17 24379884 16077648 25011372 16080910 15901050 15675726 42784366 57867720 15903113 15927770 56962259 19746836 15896217 52082376 15902469 15900393 70725848 cdd: 3885 xref: smart00344 gene: HTH_ASNC desc: helix_turn_helix ASNC type; AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli) num: 6 81427866 16077722 52078960 81429464 16077573 16077492 cdd: 3916 xref: smart00475 gene: 53EXOc desc: 5'-3' exonuclease; num: 52 15615715 15894383 24378800 15927021 81429016 56964474 42780781 55821733 50365399 22536572 73662384 18310976 31544437 15902076 20807355 52081410 70726471 70726235 58337813 47459323 42519528 39939162 23099618 78045179 15927268 26553652 15899978 57867172 23099156 42783764 54020611 19745349 16079259 13508118 15674124 76786985 28211720 29375463 25010498 52080710 56421265 42561209 73662613 46908113 28378222 42560650 12045117 16079961 46907796 15674390 57866934 50364870 cdd: 4036 xref: pfam00012 gene: HSP70 desc: Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region. num: 46 15672936 42783441 56963424 76787993 46907701 28211653 42780217 15927160 15675606 20807436 15894564 52081095 54020021 19746714 42561139 13508173 15828694 55820218 58337526 31544743 39939190 25010171 42519351 50365233 73662486 18311015 78045047 47458948 15613909 70726337 57867037 26554398 16079601 28378660 23099423 56421039 29375876 13357899 22536282 18309230 15902499 71894366 15900431 24378606 81428847 12045161 cdd: 4174 xref: pfam00318 gene: Ribosomal_S2 desc: Ribosomal protein S2. num: 44 15895063 20807856 23099041 15614990 78042772 13357582 15902019 42782918 42561137 71894428 46907887 70726659 25011912 16078712 39938651 26554414 57866730 28378686 24380374 13507947 81428876 28210947 18310682 73662821 31544727 56964007 76787145 56419784 54020008 15674135 55820175 15675849 52080252 15829004 15904061 29376895 15926839 22537971 42519372 19746964 12044922 50365378 47459011 58337547 cdd: 4290 xref: pfam00654 gene: Voltage_CLC desc: Voltage gated chloride channel. This family of ion channels contains 10 or 12 transmembrane helices. Each protein forms a single pore. It has been shown that some members of this family form homodimers. These proteins contain two pfam00571 domains. num: 5 15675309 15901022 15903089 58338211 19746349 cdd: 4304 xref: pfam00699 gene: Urease_beta desc: Urease beta subunit. This subunit is known as alpha in Heliobacter. num: 9 13357996 57867796 42782713 15927869 15612816 56420466 16080718 73661573 55820377 cdd: 4371 xref: pfam00896 gene: Mtap_PNP desc: Phosphorylase family 2. num: 13 56965482 56420848 25011302 19745960 15902778 15674917 76788598 15900718 18309380 22537338 16079406 52080866 42783201 cdd: 4377 xref: pfam00908 gene: dTDP_sugar_isom desc: dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyse the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13. num: 7 28377962 56965452 15895598 29376701 18309599 42518976 42780410 cdd: 4383 xref: pfam00926 gene: DHBP_synthase desc: 3,4-dihydroxy-2-butanone 4-phosphate synthase. 3,4-Dihydroxy-2-butanone 4-phosphate is biosynthesised from ribulose 5-phosphate and serves as the biosynthetic precursor for the xylene ring of riboflavin. Sometimes found as a bifunctional enzyme with pfam00925. num: 22 28210397 15672977 23100669 76787663 15614119 15902206 57867216 15927343 56420830 22536912 28378159 25010824 15893881 73662306 16079383 18309550 42783227 78043761 15900113 56963577 52080841 70726156 cdd: 4391 xref: pfam00950 gene: ABC-3 desc: ABC 3 transport family. num: 40 19745273 73663396 15926309 29376584 39938580 15673299 19745582 15674575 56962887 15674095 24380336 24378697 25010227 81427899 29375188 15674317 70725143 67078362 15901980 46906391 22537674 52081847 15903536 76788538 81427791 15904017 56965717 20806876 25011628 76788539 16080127 29374715 55820285 46908080 22536341 28377887 16077356 15613953 57866183 23097888 cdd: 4442 xref: pfam01098 gene: FTSW_RODA_SPOVE desc: Cell cycle protein. This entry includes the following members; FtsW, RodA, SpoVE num: 87 20808372 57867615 15672650 15672866 29375869 23098104 28211291 56964563 78044656 18310841 15615837 42518922 52079086 46908598 42783005 29376994 15672878 22536925 16078585 42518871 42783043 20808073 55820569 28378756 73662108 28378931 15894533 42780209 76787918 81428727 16078549 58337140 52082309 81428687 76786785 56419654 18309332 15927659 46908866 15615922 23098925 52079085 15674690 46908599 52080123 15900696 15615838 56964121 57866650 15902756 56964564 19745717 58337094 22536794 56419613 78043340 73662985 56419368 52082310 25010836 42783277 15615129 56965579 29375868 23098884 28378704 20807386 15926698 18311118 25010665 46907299 46908865 55821236 16080863 70726840 24379698 28212083 42780399 15903017 15893796 15900936 15895395 70725954 52080088 29376951 24379181 28211686 cdd: 4580 xref: pfam01610 gene: Transposase_12 desc: Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165. num: 62 15926745 55821400 70725379 70725877 70725324 22537404 70727281 78043769 70725762 70725946 28378182 70726073 70727619 28379668 70725031 15903053 70727190 70726928 70726966 24379744 70725502 70726511 15903743 70727468 15926515 70726050 70725831 42519231 28378775 70727447 70725722 42518150 70726913 15927297 70725521 15927434 70726960 28377860 15928080 42518272 70726644 28378249 15926085 55820964 42518738 70725346 15927655 70725081 28378045 15902177 55820489 15926307 28378658 70726196 70726253 22538157 42519473 55820117 28379140 28379463 70727074 70726152 cdd: 4637 xref: pfam01807 gene: zf-CHC2 desc: CHC2 zinc finger. This domain is principally involved in DNA binding in DNA primases. num: 4 39938862 39939032 39938822 15081515 cdd: 4670 xref: pfam02030 gene: Lipoprotein_8 desc: Hypothetical lipoprotein (MG045 family). This family includes hypothetical lipoproteins, the amino terminal part of this protein is related to pfam01547, a family of solute binding proteins. This suggests this family also has a solute binding function. num: 9 47458887 13507797 31544670 13357667 26554314 47458886 12044895 26554309 54020580 cdd: 4677 xref: pfam02082 gene: Rrf2 desc: Transcriptional regulator. This family is related to pfam001022 and other transcription regulation families (personal obs: Yeats C). num: 4 16078003 15672540 16080810 16079806 cdd: 4759 xref: pfam02503 gene: PP_kinase desc: Polyphosphate kinase. Polyphosphate kinase (Ppk) catalyses the formation of polyphosphate from ATP, with chain lengths of up to a thousand or more orthophosphate molecules. num: 7 70725588 42783090 57865441 15893910 73661742 15613955 28377686 cdd: 4781 xref: pfam02609 gene: Exonuc_VII_S desc: Exonuclease VII small subunit. This family consist of exonuclease VII, small subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones. num: 28 19746453 52080962 22536676 56420929 15675403 42783298 25010612 15901069 15615345 46907588 57867012 70726394 55821224 58337603 76788562 56964229 42519420 28378302 15903131 15927103 73662541 29375562 23099333 78044869 24379059 20807744 16079485 81428293 cdd: 4785 xref: pfam02664 gene: LuxS desc: LuxS protein. This family consists of the LuxS protein involved in autoinducer AI2 synthesis and its hypothetical relatives. The LuxS protein is involved in quorum sensing and is a autoinducer-production protein. num: 29 70725902 15615915 42519694 15902352 16080119 19746564 15672248 55820485 58337381 52081554 15900270 56421398 15927708 58337372 28377630 46907515 15896195 42783992 22536489 15675515 73662060 57867625 25010368 56964679 76787743 23098562 29375757 24378961 18309160 cdd: 4996 xref: pfam03237 gene: DUF264 desc: Protein of unknown function DUF264. This family represents a group of plasmid encodes proteins specifically found in Borrelia and that currently do not show any similarity to any other proteins outside the Borrelia genus. Proteins within this family are about 450 residues long and are found to be expanded in Borrelia burgdorferi. The function of this protein is unknown. num: 4 28210787 15674745 19746665 42518398 cdd: 5023 xref: pfam03264 gene: Cytochrom_NNT desc: NapC/NirT cytochrome c family, N-terminal region. Within the NapC/NirT family of cytochrome c proteins, some members, such as NapC and NirT, bind four haem groups, while others, such as TorC, bind five haems. This family aligns the common N-terminal region that contains four haem-binding C-X(2)-CH motifs. num: 6 78042881 78043912 78042788 78043940 78045052 78044121 cdd: 5064 xref: pfam03306 gene: AAL_decarboxy desc: Alpha-acetolactate decarboxylase. num: 9 52082136 42780033 16080653 26554076 47459036 46908219 42519051 81428592 28378663 cdd: 5077 xref: pfam03319 gene: EutN_CcmL desc: Ethanolamine utilisation protein EutN/carboxysome structural protein Ccml. num: 5 18309889 46907381 46907404 29376178 78045187 cdd: 5081 xref: pfam03323 gene: GerA desc: Bacillus/Clostridium GerA spore germination protein. num: 63 56420836 56963768 20808904 56420152 23099289 15614751 23098149 42781810 56420979 52080855 52081793 56965465 56962431 16080633 23100223 56420159 15613663 20808743 15893885 16077846 78043444 28211424 18309966 42779782 15614497 15614019 21392833 23098551 42782639 28210047 42783920 56965253 15004724 67078017 52078899 28211714 42779905 15614160 16079396 16078838 56419507 42779856 15614106 52080550 16077438 42782640 10956360 15614552 56963565 23097938 28212033 52081022 16080358 15613986 18309630 23099376 56962112 15893932 56963786 56963492 56965595 15896544 42783181 cdd: 5092 xref: pfam03334 gene: PhaG_MnhG_YufB desc: Na+/H+ antiporter subunit. This family includes PhaG from Rhizobium meliloti, MnhG from Staphylococcus aureus, YufB from Bacillus subtilis. num: 4 16080217 15926535 23099452 57866482 cdd: 5176 xref: pfam03418 gene: Peptidase_U3 desc: Germination protease. num: 12 52081103 56963417 78044279 20807427 56421046 28211661 18311023 42783448 15894557 15613903 16079608 23099430 cdd: 5177 xref: pfam03419 gene: Peptidase_U4 desc: Sporulation factor SpoIIGA. num: 12 42782998 20808065 15615120 28210820 15894971 52080134 56419661 56964117 16078595 78044280 18310745 23098929 cdd: 5263 xref: cd00175 gene: SNc desc: Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes. They contain no disufide bonds. num: 7 71894134 57867463 78043598 47458962 54020340 54020170 31544237 cdd: 5296 xref: cd00207 gene: fer2 desc: 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin. num: 4 18311328 20807375 78044506 15893326 cdd: 5334 xref: cd00156 gene: REC desc: Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers num: 78 78043687 20807538 22538262 15895486 16079478 52080955 15615007 56964021 56962548 16077314 56419767 46906940 70725338 15614825 15614576 42780166 78044938 23099024 42780944 56964222 78044142 20807658 52082247 56965748 20806665 18310795 52080002 28209857 56419875 20807875 16078857 76788662 52079040 78043545 15894516 52080236 42784511 42783289 15615278 46906942 78045144 56962500 23099327 28211235 15615530 28211349 52080416 28211381 16078465 56420516 56963907 56420003 56421922 78043169 16080766 15616008 20807753 16078696 15893874 15616349 78042666 15895341 56420922 20807566 15896531 56419574 20807517 15893418 15895673 56965642 42780850 25012122 52078730 15615336 15893413 16080688 23100461 15614275 cdd: 5341 xref: cd00267 gene: ABC_ATPase desc: ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop andWalker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins. num: 34 55821397 25012024 13507794 28210315 31544450 71894398 81429028 42560735 42784124 19746833 26554311 15903422 24378556 29375831 23097736 42560734 26554329 54020032 22538162 52079798 71894345 55820274 42519173 71894058 42519897 76786893 55820372 55821686 28210472 13358102 70725289 20806906 15675072 42561051 cdd: 5361 xref: cd00118 gene: LysM desc: Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. num: 45 56421176 42783597 20807309 15613374 78043711 28377225 20808909 52079879 15903916 42782845 55820528 16079836 56419843 56421815 52080634 56420953 15613784 29377267 16079001 15672897 20808596 20807784 42519013 24378864 70727228 73663600 16078007 42780686 52081264 29376027 15674586 56421133 29376978 73663367 55821973 70727546 19745593 29376109 23097675 16079561 28373134 15613256 56965297 58337263 29377273 cdd: 5369 xref: cd00130 gene: PAS desc: PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction. num: 21 42779774 56421960 67078237 28211430 42784471 56419479 52080050 16078463 56418902 52079997 78043169 23098814 20806576 23099135 46907930 23098712 56420162 23098043 16080464 78044830 52079902 cdd: 5373 xref: cd00140 gene: POL3Bc desc: DNA polymerase III beta subunit; the processivity factor of the holoenzyme forms a ring shaped dimer that encircles dsDNA (sliding clamp) num: 42 39938488 56418537 28209865 73661311 47458837 26553454 29374663 22536187 57865930 15899951 78043484 71894027 55820105 50364817 20806544 15902046 15925707 19745203 42518086 76787013 70725003 23097457 52078493 25010077 16077070 81427618 18308984 28376976 15893300 56961784 15674252 42560562 54019971 13507740 46906226 31544930 15671984 24378534 58336356 42779083 44004430 42781777 cdd: 5375 xref: cd00210 gene: PTS_IIA_glc desc: PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. num: 152 55821706 42518347 73661433 58337730 15675776 42560822 42518782 73661645 24380385 57866914 28210041 24379420 15674662 26553626 15896668 28379828 58337042 15894686 56419526 29376161 58336738 29376082 29374910 15925893 56963538 50365435 76788255 46907249 19746968 15927003 81427674 42519186 15901555 15613407 15614078 55821385 58337307 42519782 15673442 28379802 15903741 25010264 42519869 28377125 50364848 15675853 15903609 70725522 42519686 70726485 47458900 15894633 56965548 28379073 18309057 29377861 28377717 15901712 15828488 15902712 15896247 58337965 28377191 76788558 71894170 58336934 42519806 15925968 12044921 26554043 16081064 46907267 25011984 15672408 28379834 42518682 26553906 22538095 55821861 54020275 26553588 20806977 19746889 29376932 50365128 58337838 15675645 22536954 29377084 16077304 25010865 13507946 28379541 76787932 28379436 50364823 52082496 28379841 28379609 25011774 26554416 28379408 16078453 28379599 28379617 16079281 15893860 19746751 56421981 55820595 57865545 46908961 58337744 81428810 15902549 52080731 24380379 50365003 23100213 28377190 52082481 15612859 15928117 16080978 22536376 46906253 15900487 28377737 42519715 31544338 76788605 81429404 15900652 22537830 29375541 24380203 15613158 23099337 73662626 19745690 15893714 15673114 42784490 42783164 50365134 56961976 73661432 28379785 28379378 58337963 55820290 52079180 cdd: 5390 xref: cd00189 gene: TPR desc: Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here num: 130 28211870 15895668 18309228 52081507 15893343 46907563 18310961 15613984 15896690 52081228 42782134 58337268 56965016 15614253 24379851 52079241 15893695 16081082 42784309 15675015 23099378 15896056 56421604 18310275 55821152 15614612 44004487 73662516 67078346 67078198 56963669 81428625 15614232 46907738 76787183 28211930 15894350 16080691 57867074 70727127 15926440 16077445 46906939 15616258 56420634 56963491 42780405 16080534 42780219 42782848 15613825 15896250 15894349 15896551 16077681 46908651 52080847 15901351 56420359 70726300 15903399 56963352 52082024 15616134 28378778 78045132 46907198 78042803 23100041 20807006 56965566 15893707 16079876 15927129 16080798 15613042 46908155 15894353 52079347 18310853 56962453 28211467 42784629 15895755 15896926 15893703 16079543 42781305 18310970 56965085 56421097 42782023 56420730 56963829 15927200 19746000 42780218 23100882 15616268 23099468 16078308 81428417 56964787 56962252 52081023 56964803 57867111 78044364 42783524 25011315 16079316 18310902 15673165 56420676 42780720 15896077 73662450 16079636 15894213 42518914 22537351 16077568 18309644 15894212 78044885 23099925 16079802 15893706 42779609 28211359 cdd: 5396 xref: cd00233 gene: VIP2 desc: VIP2; A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of biological pathways distinct from classical A-B toxins. A novel family of insecticidal ADP-ribosyltransferses were isolated from Bacillus cereus during vegetative growth, where VIP1 likely targets insect cells and VIP2 ribosylates actin. VIP2 shares significant sequence similarity with enzymatic components of other binary toxins, Clostridium botulinum C2 toxin, C. perfringens iota toxin, C. piroforme toxin, C. piroforme toxin and C. difficile toxin. num: 6 29374974 21392848 19745566 29376024 10956354 15674555 cdd: 5488 xref: pfam02581 gene: TMP-TENI desc: Thiamine monophosphate synthase/TENI. Thiamine monophosphate synthase (TMP) (EC:2.5.1.3) catalyses the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate. This Pfam family also includes the regulatory protein TENI. num: 10 23097927 76787184 42779567 25010915 22537006 56420046 16080880 81427671 78044820 52082338 cdd: 5491 xref: pfam02674 gene: Colicin_V desc: Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon. num: 26 16079912 42783726 70726820 22537859 42518574 15926726 73662962 56964442 15673628 81428006 19746771 15675665 56421230 15902411 24380227 29375970 25011804 23099581 52081361 15615670 57866645 55821735 28379664 46907449 15900324 76787002 cdd: 5518 xref: pfam03475 gene: 3-alpha desc: 3-alpha domain. This small triple helical domain has been predicted to assume a topology similar to helix-turn-helix domains. These domains are found at the C-terminus of proteins related to E. coli yiiM. num: 11 42783570 16077832 52079223 42781533 15927917 56962370 70725720 15613179 56420167 52081813 57867821 cdd: 5540 xref: pfam03497 gene: Anthrax_toxA desc: Anthrax toxin LF subunit. num: 4 10956369 21392848 21392820 10956354 cdd: 5638 xref: pfam03596 gene: Cad desc: Cadmium resistance transporter. num: 14 76787934 15675902 15901461 70725100 57865615 58336373 15673935 15903509 70727322 57867301 19747002 22537414 28379429 25012102 cdd: 5642 xref: pfam03600 gene: CitMHS desc: Citrate transporter. num: 17 42779701 19746118 15928204 70725422 81428843 52078686 24379453 15675152 29377768 16079739 15613308 56962439 16080957 73663186 56962236 16077828 56961882 cdd: 5654 xref: pfam03612 gene: EIIBC-GUT desc: Sorbitol phosphotransferase enzyme II. num: 9 56962930 56964999 15613335 46906788 29377747 52082152 24378814 28379953 28379923 cdd: 5655 xref: pfam03613 gene: EIID-AGA desc: PTS system mannose/fructose/sorbose family IID component. num: 66 25011974 29376372 29376346 29377661 25010420 22538085 29377500 28379160 46906250 29375170 22538036 29375406 23100828 20806720 19746032 15894739 15902339 29375087 15673690 56965831 25011925 42519820 15675589 19745730 29377488 42518207 15900008 15900257 18309305 28377458 22536542 46906337 18309805 46908227 67078208 15904008 76787239 55820424 15902106 24380235 15675052 15004772 81428065 24380303 19746697 18311612 15900216 18309806 24378623 42519530 42518663 42519696 15902303 52081179 16079758 15901971 29376773 46907013 58336789 29376477 29377440 29374681 15674702 76788575 18310445 29377592 cdd: 5668 xref: pfam03626 gene: COX4_pro desc: Prokaryotic Cytochrome C oxidase subunit IV. Cytochrome c oxidase (COX) is a multi-subunit enzyme complex that catalyses the final step of electron transfer through the respiratory chain on the mitochondrial inner membrane. This family is composed of cytochrome c oxidase subunit 4 from prokaryotes. num: 5 56964155 52080095 42783036 56419620 23098895 cdd: 5714 xref: pfam03672 gene: UPF0154 desc: Uncharacterised protein family (UPF0154). This family contains a set of short bacterial proteins of unknown function. num: 4 12045193 13357825 58337554 56963927 cdd: 5740 xref: pfam03698 gene: UPF0180 desc: Uncharacterised protein family (UPF0180). The members of this family are small uncharacterised proteins. num: 8 42780587 16078484 56964195 56419586 15894765 52080020 78044281 15615230 cdd: 6256 xref: pfam00815 gene: Histidinol_dh desc: Histidinol dehydrogenase. num: 18 78044940 15928264 20808528 15894224 56962940 56964812 42780600 15616144 16080544 15673191 57865756 56421610 23098006 24379691 52082031 73661738 28379094 46906812 cdd: 6281 xref: pfam00886 gene: Ribosomal_S16 desc: Ribosomal protein S16. num: 43 25011470 15615046 42519387 23098987 42782936 56964058 19745916 55821524 70726677 78044705 12045305 47459265 73662838 15674875 57866689 22537505 50365359 13358133 46908029 15895032 26553554 18310694 16078662 54020035 28378334 81428330 24379319 15673551 76788217 15828940 58337565 39938958 29376248 52080201 71894035 42560960 31544830 15926821 13508399 56419732 15902726 15900669 20807908 cdd: 6339 xref: pfam01025 gene: GrpE desc: GrpE. num: 37 15675607 55820217 39939191 23099424 26554349 58337527 15894563 24378605 28211654 15613908 42519352 12045053 50365234 46907702 15902498 56963423 16079602 78044836 42783442 15927161 76788374 56421040 20807435 31544539 52081096 25010170 70726336 13507859 73662485 57867038 42561140 15672935 54019980 22536281 29375875 18311016 19746715 cdd: 6423 xref: pfam01289 gene: Thiol_cytolysin desc: Thiol-activated cytolysin. num: 8 19745333 28211522 15901747 42782367 18309145 15903781 46906434 15674372 cdd: 6439 xref: pfam01396 gene: zf-C4_Topoisom desc: Topoisomerase DNA binding C4 zinc finger. num: 13 28211475 10956465 15895061 71894542 10956388 56899941 21392886 44004479 54020038 18310684 15828942 47458917 42561447 cdd: 6485 xref: pfam01526 gene: Transposase_7 desc: Transposase. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases. num: 6 67077952 21392830 33416265 15004797 67077923 10956363 cdd: 6681 xref: pfam02317 gene: Octopine_DH desc: NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain. This group of enzymes act on the CH-NH substrate bond using NAD(+) or NADP(+) as an acceptor. The Pfam family consists mainly of octopine and nopaline dehydrogenases from Ti plasmids. num: 5 73661920 70725758 57867816 20807404 15927882 cdd: 6745 xref: pfam02464 gene: CinA desc: Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. num: 6 52080298 16078756 15901765 56963966 56419829 15903800 cdd: 6840 xref: pfam02871 gene: Octopine_DH_N desc: NAD/NADP octopine/nopaline dehydrogenase, NAD binding domain. This group of enzymes act on the CH-NH substrate bond using NAD(+) or NADP(+) as an acceptor. The Pfam family consists mainly of octopine and nopaline dehydrogenases from Ti plasmids. This domain is an NAD(P) binding Rossman fold. num: 5 73661920 70725758 57867816 20807404 15927882 cdd: 7029 xref: pfam03235 gene: DUF262 desc: Protein of unknown function DUF262. num: 10 56421818 18311137 70725232 29377951 28210413 50365121 47459447 42561303 13358091 56421829 cdd: 7110 xref: pfam03609 gene: EII-Sor desc: PTS system sorbose-specific iic component. num: 65 24380234 18309804 29375405 42519821 25011975 18310446 29375169 15902304 15674703 22538086 20806720 15902105 81428064 42518662 46906249 24378622 42519531 28379161 67078207 19745731 15902338 29375086 15900217 23100829 15894738 46907014 29377441 29377489 42518206 22536543 19746031 25011926 15904009 25010421 22538037 76788287 46908228 15004771 52081180 15675588 29376774 19746696 46906336 76787659 29376478 29377660 18311613 55820425 29374680 42519697 24380304 15675051 18309304 29376373 29376347 15673689 29377501 16079759 56965830 29377593 15900007 58336788 15900256 28377457 15901972 cdd: 7204 xref: pfam03786 gene: UxuA desc: D-mannonate dehydratase (UxuA). UxuA (this family) and UxuB are required for hexuronate degradation. num: 13 29377589 16078299 22536866 15613269 52079754 15613626 76788175 70727646 52080488 18309133 15673613 25010730 56962405 cdd: 7224 xref: pfam03806 gene: ABG_transport desc: AbgT putative transporter family. num: 10 15928052 56962745 15614315 23100245 16077371 15613429 23098167 73661744 28211006 70725590 cdd: 7230 xref: pfam03812 gene: KdgT desc: 2-keto-3-deoxygluconate permease. num: 5 52082115 16079267 23098466 56962088 78043980 cdd: 7232 xref: pfam03814 gene: KdpA desc: Potassium-transporting ATPase A subunit. num: 11 42779886 29165619 29375180 57865936 70725034 15927652 56421783 15896914 20808415 46908861 18450334 cdd: 7243 xref: pfam03825 gene: Nuc_H_symport desc: Nucleoside H+ symporter. num: 4 16080885 15614839 20808854 56421365 cdd: 7263 xref: pfam03845 gene: Spore_permease desc: Spore germination protein. num: 56 15613668 67078014 78044384 52078901 42782641 16078839 28210048 15896545 52081794 23098550 52080546 15004721 42779780 56963769 42779857 15614499 15614750 16080359 42781811 56420161 67078013 56962429 56965464 15893886 28211712 15614555 52080549 10956361 56963787 16077843 15004726 15893931 28212034 16080634 21392832 20808744 15614161 56965254 23098150 42779903 15894805 15614734 15613666 16077440 52080548 42783921 15614018 18309629 23097937 56419509 15613667 20808903 28211426 56965594 78043180 56420153 cdd: 7480 xref: pfam00145 gene: DNA_methylase desc: C-5 cytosine-specific DNA methylase. num: 10 25011412 50365124 15901190 46906547 42779446 70725582 15616070 56899928 42779474 23100791 cdd: 7494 xref: pfam00166 gene: Cpn10 desc: Chaperonin 10 Kd subunit. num: 16 78044510 70726002 42518556 56418783 20809018 58336742 15927605 56962655 20807075 18311272 15613124 15672375 46908304 15895961 73662156 57867364 cdd: 7500 xref: pfam00176 gene: SNF2_N desc: SNF2 family N-terminal domain. This domain is found in proteins involved in a variety of processes including transcription regulation (e.g., SNF2, STH1, brahma, MOT1) , DNA repair (e.g., ERCC6, RAD16, RAD5), DNA recombination (e.g., RAD54), and chromatin unwinding (e.g., ISWI) as well as a variety of other proteins with little functional information (e.g., lodestar, ETL1). num: 5 21392701 46907537 10956255 70726780 42560912 cdd: 7555 xref: pfam00302 gene: CAT desc: Chloramphenicol acetyltransferase. num: 4 56963743 52081186 28378460 42781506 cdd: 7560 xref: pfam00308 gene: Bac_DnaA desc: Bacterial dnaA protein. num: 13 16077069 52078492 81427617 15925706 12045329 56961783 57865939 28209866 50364816 70725002 73661310 56418536 42560561 cdd: 7582 xref: pfam00378 gene: ECH desc: Enoyl-CoA hydratase/isomerase family. This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. num: 8 78043925 56420527 16078778 23099153 56421314 42780055 16078777 23100123 cdd: 7590 xref: pfam00395 gene: SLH desc: S-layer homology domain. num: 32 42780270 42780959 42780060 42784018 21392936 20808950 21392808 20808960 42780148 42782760 42780301 20806693 42781890 28210486 10956337 42780300 20806645 67077960 10956301 42783998 42780958 20808774 20806692 42780302 42780151 21392765 10956432 44004399 42780038 42780518 42782348 20808485 cdd: 7613 xref: pfam00440 gene: TetR_N desc: Bacterial regulatory proteins, tetR family. num: 78 81427884 56962716 28377106 19746607 56963375 28377199 42782191 15675556 15674231 73661592 15613550 28209852 15672219 16080015 46908196 18309727 42780252 70725084 81428664 16081036 28379259 42783835 24379070 16077453 30023983 22537788 15896516 15672235 25011733 56965192 42781606 56965395 15614450 67077957 42780231 24380169 42779293 16080873 56964518 29375378 56421103 56964701 15894011 76786734 46909003 56419199 15896741 67077933 46907160 15896919 23100225 42784612 15893317 15896718 42779459 16077599 15673496 46908636 56965168 52079713 56421737 15672592 24378746 16080356 42782662 23097783 15614666 15894010 29375893 28379556 28377727 28377824 28379510 56964951 58337896 28378381 25010682 28379749 cdd: 7625 xref: pfam00475 gene: IGPD desc: Imidazoleglycerol-phosphate dehydratase. num: 17 20808526 73661736 28379093 52082030 15894225 15928262 46906811 15673192 56964811 24379689 15616143 78042790 56421609 42780601 16080543 23098005 57865755 cdd: 7651 xref: pfam00534 gene: Glycos_transf_1 desc: Glycosyl transferases group 1. Mutations in this domain may lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. num: 60 20807151 42518953 18309481 15900074 15926242 15895457 18309482 28379315 57865698 78043838 70725398 70725399 81429121 18309467 70725042 57866083 42779386 28377980 55820501 15895580 18309470 70725693 56963856 15926243 18309468 57865401 70725333 24379280 15896160 28210035 25011559 16080487 28378061 57865597 18309253 28377195 56421843 28379314 57865455 18309461 15902360 16080140 22537593 18309462 23100341 15896322 18309480 73661847 78043351 15896300 15928234 16080626 56419373 52082106 56963260 57866126 16080612 15672904 76788567 16080143 cdd: 7657 xref: pfam00547 gene: Urease_gamma desc: Urease, gamma subunit. Urease is a nickel-binding enzyme that catalyses the hydrolysis of urea to carbon dioxide and ammonia. num: 9 57867795 42782714 55820376 16080719 15927868 56420467 15612815 13357997 73661574 cdd: 7668 xref: pfam00565 gene: SNase desc: Staphylococcal nuclease homologue. Present in all three domains of cellular life. Four copies in the transcriptional coactivator p100: these, however, appear to lack the active site residues of Staphylococcal nuclease. Positions 14 (Asp-21), 34 (Arg-35), 39 (Asp-40), 42 (Glu-43) and 110 (Arg-87) [SNase numbering in parentheses] are thought to be involved in substrate-binding and catalysis. num: 21 15926905 15926468 44004480 29377937 78043424 21392884 70726689 16077984 52079394 23097954 10956387 73662753 29375139 70726584 16079220 78043636 57866800 56421453 16078825 58616115 78043809 cdd: 7739 xref: pfam00725 gene: 3HCDH desc: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain. This family also includes lambda crystallin. Some proteins include two copies of this domain. num: 4 56421543 15616050 23099850 78044975 cdd: 7810 xref: pfam00882 gene: Zn_dep_PLPC desc: Zinc dependent phospholipase C. num: 6 15004851 28210696 42779822 46906437 18309018 15894306 cdd: 7812 xref: pfam00885 gene: DMRL_synthase desc: 6,7-dimethyl-8-ribityllumazine synthase. This family includes the beta chain of 6,7-dimethyl-8- ribityllumazine synthase EC:2.5.1.9, an enzyme involved in riboflavin biosynthesis. The family also includes a subfamily of distant archaebacterial proteins that may also have the same function. num: 22 22536913 52080840 73662307 76788582 15927342 78044703 70726157 56420829 57867215 16079382 15902205 56963578 15900112 42783228 15893882 18309551 15614120 15672978 28210398 28378160 23100668 25010825 cdd: 7851 xref: pfam00975 gene: Thioesterase desc: Thioesterase domain. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. num: 5 52080915 46907739 28377462 29374914 28210843 cdd: 7866 xref: pfam01016 gene: Ribosomal_L27 desc: Ribosomal L27 protein. num: 44 76787296 42519427 13357769 39938574 24379304 15674862 57867156 78044339 15828800 50365257 46907768 73662423 55820505 42561093 15894541 16079846 31544573 29375553 23099499 12045089 42783580 25011480 20807396 15615571 15927225 81428287 58337610 22537515 19745902 56421143 15900974 71894561 13508066 54020415 15903058 26553896 28378295 70726276 47459140 56964365 52081274 15673063 28211678 18311110 cdd: 7889 xref: pfam01061 gene: ABC2_membrane desc: ABC-2 type transporter. num: 10 57867311 29376691 20807602 55821453 22536835 76787017 20807633 24379282 25010706 18309251 cdd: 7893 xref: pfam01070 gene: FMN_dh desc: FMN-dependent dehydrogenase. num: 12 15674548 15902671 78044740 81429009 42519875 81428280 78042702 19745559 15900612 15673234 18310860 28379893 cdd: 7908 xref: pfam01117 gene: Aerolysin desc: Aerolysin/Hemolysin/Leukocidin toxin. This family represents the pore forming lobe of aerolysin, and the related toxins hemolysin and the leukocidin S subunit. num: 9 42780284 15927394 15927581 15927999 15927998 15927393 15927997 15926746 15927580 cdd: 7948 xref: pfam01252 gene: Peptidase_A8 desc: Signal peptidase (SPase) II. num: 15 16078609 12045062 23098940 57866711 70726719 15926779 42782986 56964105 42519112 13508032 15615106 73662885 46908076 52080147 31544414 cdd: 7997 xref: pfam01443 gene: Viral_helicase1 desc: Viral (Superfamily 1) RNA helicase. Helicase activity for this family has been demonstrated and NTPase activity. This helicase has multiple roles at different stages of viral RNA replication, as dissected by mutational analysis. num: 4 57865915 21392874 81427888 10956380 cdd: 8024 xref: pfam01487 gene: DHquinase_I desc: Type I 3-dehydroquinase. Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) Catalyses the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate giving dehydroshikimate. Dehydroquinase functions in the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Type II 3-dehydroquinase catalyses the trans-dehydration of 3-dehydroshikimate see pfam01220. num: 8 16079365 28379809 42519799 52079349 29376281 56420592 46906737 70727056 cdd: 8034 xref: pfam01515 gene: PTA_PTB desc: Phosphate acetyl/butaryl transferase. This family contains both phosphate acetyltransferase and phosphate butaryltransferase. These enzymes catalyse the transfer of an acetyl or butaryl group to orthophosphate. num: 25 78044760 12045155 73662545 52080947 28210926 42784561 18311330 52082282 16080818 13508167 18310707 58337025 42783284 31544825 20808584 15895019 50364858 26553955 16079465 20808577 15896327 42560817 23100477 28212125 20807926 cdd: 8037 xref: pfam01520 gene: Amidase_3 desc: N-acetylmuramoyl-L-alanine amidase. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls. num: 5 28211148 18310484 10956432 20808730 21392936 cdd: 8074 xref: pfam01594 gene: UPF0118 desc: Domain of unknown function DUF20. This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution. num: 18 24380070 15615171 16079795 16080231 16079968 18310895 15902821 52078982 28209877 16080168 52081609 56421067 16077515 56963750 21392750 18309570 52081677 15900756 cdd: 8104 xref: pfam01717 gene: Methionine_synt desc: Methionine synthase, vitamin-B12 independent. This is a family of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, EC:2.1.1.14 from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length. num: 19 42783100 16078383 73663725 15613001 70727637 22538184 25012043 76788547 30024031 15926057 28378113 52079820 56963214 15902558 55820837 15900494 24379327 57865964 46907912 cdd: 8105 xref: pfam01719 gene: Rep_2 desc: Plasmid replication protein. This family consists of various bacterial plasmid replication (Rep) proteins. These proteins are essential for replication of plasmids, the Rep proteins are topoisomerases that nick the positive stand at the plus origin of replication and also at the single-strand conversion sequence. num: 8 76787821 25012109 58336665 25011360 39939153 76787536 58336379 58336814 cdd: 8141 xref: pfam01813 gene: ATP-synt_D desc: ATP synthase subunit D. This is a family of subunit D form various ATP synthases including V-type H+ transporting and Na+ dependent. Subunit D is suggested to be an integral part of the catalytic sector of the V-ATPase. num: 7 15674364 29376067 18310618 15901169 19745325 28210707 28211921 cdd: 8163 xref: pfam01867 gene: DUF48 desc: Protein of unknown function DUF48. This family of proteins are found in prokaryotes, they are functionally uncharacterized. num: 4 20809002 78043644 28211139 28210841 cdd: 8165 xref: pfam01874 gene: CitG desc: ATP:dephospho-CoA triphosphoribosyl transferase. The citG gene is found in a gene cluster with citrate lyase subunits. The function of the CitG protein was elucidated as ATP:dephospho-CoA triphosphoribosyl transferase. num: 6 81428831 58337519 29377756 28377885 28212134 18310127 cdd: 8171 xref: pfam01887 gene: DUF62 desc: Protein of unknown function DUF62. Protein found in Archaebacteria and Bacteria. These proteins have no known function. num: 9 15928272 42519579 55820400 52082607 46908758 24380285 23098522 15900396 15902472 cdd: 8173 xref: pfam01895 gene: PhoU desc: PhoU family. This family contains phosphate regulatory proteins including PhoU. The exact nature of this regulation is is not well understood. num: 6 28377610 15901904 15903940 81428120 58336704 42518719 cdd: 8204 xref: pfam02113 gene: Peptidase_S13 desc: D-Ala-D-Ala carboxypeptidase 3 (S13) family. num: 5 16078896 52080504 23100600 56964459 23098817 cdd: 8227 xref: pfam02245 gene: Pur_DNA_glyco desc: Methylpurine-DNA glycosylase (MPG). Methylpurine-DNA glycosylase is a base excision-repair protein. It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA. num: 20 56963701 16080913 24380452 42518174 28378632 70725715 52082379 15896222 29376500 28210735 23097752 46907162 58336460 78044825 18311558 57867833 81428155 15927924 73661870 42780035 cdd: 8251 xref: pfam02322 gene: Cyto_ox_2 desc: Cytochrome oxidase subunit II. This Family consists of cytochrome bd type terminal oxidases that catalyses Quinol dependent, Na+ independent oxygen uptake. Members of this family are integral membrane proteins and contain a protoheame IX centre B558. One member of the family is implicated in having an important role in microaerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. num: 12 78043602 42781091 46908896 16080926 42519860 28377911 42783996 76787435 22537880 29376569 52082419 25011825 cdd: 8260 xref: pfam02348 gene: CTP_transf_3 desc: Cytidylyltransferase. This family consists of two main Cytidylyltransferase activities: 1) 3-deoxy-manno-octulosonate cytidylyltransferase, EC:2.7.7.38 catalysing the reaction:- CTP + 3-deoxy-D-manno-octulosonate <=> diphosphate + CMP-3-deoxy-D-manno-octulosonate, 2) acylneuraminate cytidylyltransferase EC:2.7.7.43, catalysing the reaction:- CTP + N-acylneuraminate <=> diphosphate + CMP-N-acylneuraminate. NeuAc cytydilyltransferase of Mannheimia haemolytica has been characterised describing kinetics and regulation by substrate charge, energetic charge and amino-sugar demand. num: 4 76787612 22537316 78042945 25011282 cdd: 8281 xref: pfam02391 gene: MoaE desc: MoaE protein. This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins. num: 13 52080029 42783908 56419309 70725782 42782630 56962671 15615581 28378194 15927851 73661951 46907276 16078494 57867759 cdd: 8284 xref: pfam02401 gene: LYTB desc: LytB protein. The mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway for isoprenoid biosynthesis is essential in many eubacteria, plants, and the malaria parasite. The LytB gene is involved in the trunk line of the MEP pathway. num: 13 28210997 46907679 56963459 20807799 16079571 56421012 18310067 15613945 78043962 26553587 15895122 42783414 52081053 cdd: 8294 xref: pfam02416 gene: MttA_Hcf106 desc: mttA/Hcf106 family. Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif. num: 15 78045017 56418778 15926048 16078834 56962648 16077332 15613115 42781336 52078736 56420050 52079055 23098813 16077665 28563932 15616467 cdd: 8297 xref: pfam02424 gene: ApbE desc: ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. More specifically is may be involved in the conversion of aminoimidazole ribotide (AIR) to 4-amino-5-hydroxymethyl-2-methyl pyrimidine (HMP). num: 27 15903367 22537239 18311209 15901320 28379808 19746085 20808837 15896021 42519773 18311088 76787011 15673094 46908808 55820811 15672350 57865763 28210732 28377866 24379525 28379385 29377698 28211471 15896017 58338079 25011163 15675115 29375798 cdd: 8307 xref: pfam02445 gene: NadA desc: Quinolinate synthetase A protein. Quinolinate synthetase catalyses the second step of the de novo biosynthetic pathway of pyridine nucleotide formation. In particular, quinolinate synthetase is involved in the condensation of dihydroxyacetone phosphate and iminoaspartate to form quinolinic acid. This synthesis requires two enzymes, a FAD-containing "B protein" and an "A protein". num: 10 42783559 56963314 18309376 46908254 52081265 15613783 56421134 78044719 16079837 15894312 cdd: 8309 xref: pfam02457 gene: DUF147 desc: Domain of unknown function DUF147. This domain is about 120 amino acids long. The function of this domain is unknown, however the distribution of conserved histidines and aspartates suggests that this may be a metal dependent phosphoesterase. This may be a nuclear domain as some members also contain a Helix-hairpin-helix pfam00633 motif that is characteristic of DNA binding proteins. num: 43 42784105 57867669 73662031 29376665 70725878 55821260 15828878 78043546 16077243 47459290 76787949 42779236 54020541 56962023 23097685 81428970 56418687 18311333 13507983 12044957 28377668 58337033 15612828 19746018 71894510 15675033 24379831 28212128 25010956 39939070 15903462 15927744 22537048 20808587 46908356 15896330 52078667 15672405 26553665 50812249 15901404 42518817 31544661 cdd: 8310 xref: pfam02463 gene: SMC_N desc: RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. num: 11 12045154 29377169 20808433 20807912 18309198 26553935 13508165 15674730 57867000 20806787 81427758 cdd: 8317 xref: pfam02483 gene: SMC_C desc: SMC family, C-terminal domain. This Pfam family represents a conserved domain towards the C-terminus of the SMC family proteins. A second conserved domain is found at the N-terminus (pfam02463). The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. Some members of the family are know to play a role in mitotic chromosome condensation and segregation. It has been suggested that two classes of SMC complexes are involved in different aspects of mitotic chromosome organisation in human cells. num: 5 12045154 13508165 13357697 15672786 42783642 cdd: 8329 xref: pfam02517 gene: Abi desc: CAAX amino terminal protease family. Members of this family are probably proteases; the family contains CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. num: 135 15902187 15896280 70725288 52079058 23098400 28377332 55821475 22537638 10956436 55821825 25010245 57865544 42561292 58336435 81428763 15900081 76788070 10956332 56418781 15903162 15902516 28377223 22538176 57867365 15674233 28378102 52078814 15613038 73662155 15004759 15893774 56963612 58336929 15675310 24379135 76786836 15672116 15901186 28377329 70726001 16081135 15900118 73661556 15900460 19746351 78044990 42781517 15900458 22536356 42782341 25011091 28377317 22537162 76788224 46908306 29376205 16077668 15902870 42519855 46907230 42783740 28377330 25012036 20806926 21392943 42784129 28211105 15901931 15900082 57867765 42518621 42780294 23100772 15927606 15900805 16077263 50365381 76788635 23098109 56962654 56899940 25011599 76788191 70725249 44004356 81428188 73661749 58338179 21392800 81427971 21392971 29377121 42779368 42784184 22537608 20808926 18309115 28377224 15672064 58336880 15672067 18309226 28377589 42783739 15902518 21392986 24379264 15902211 55821827 15895743 15901101 57865426 28377748 56899951 15613123 28377323 28377331 73661878 15903967 16079358 23099268 28379363 52080812 15893711 15672117 70725287 15893373 15902186 25011574 15672071 56965434 42780551 15927893 15614171 56420777 cdd: 8331 xref: pfam02525 gene: Flavodoxin_2 desc: Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258. num: 18 52079299 15615311 42784141 13357941 42780007 24379823 42518327 15893316 42782370 52081993 81428931 42782490 26554131 52078836 56965444 16080652 15616447 23100637 cdd: 8342 xref: pfam02562 gene: PhoH desc: PhoH-like protein. PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation. num: 13 29376909 20807450 56963441 42519248 58337485 23099410 56421028 42783431 52081081 81428485 28378613 16079588 78044880 cdd: 8373 xref: pfam02781 gene: G6PD_C desc: Glucose-6-phosphate dehydrogenase, C-terminal domain. num: 21 57866979 70726412 56420869 56963689 28379186 15903165 52080918 23100393 58336750 15901104 28211501 73662557 15674202 16079442 15927086 42518566 81427995 20807485 42782465 29375586 46908206 cdd: 8387 xref: pfam02824 gene: TGS desc: TGS domain. The TGS domain is named after ThrRS, GTPase, and SpoT. Interestingly, TGS domain was detected also at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete Borrelia burgdorferi). TGS is a small domain that consists of ~50 amino acid residues and is predicted to possess a predominantly beta-sheet structure. There is no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role. num: 11 56965736 70725135 42560810 52078698 20808138 46907789 15674621 52079348 56964462 19745635 24379968 cdd: 8395 xref: pfam02842 gene: GARS_B desc: Phosphoribosylglycinamide synthetase, B domain. Phosphoribosylglycinamide synthetase catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by Phosphoribosylglycinamide synthetase is the ATP- dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide. This family is related to biotin carboxylase/carbamoyl phosphate synthetase (see pfam02786). num: 4 25011901 76788315 52078691 22537960 cdd: 8420 xref: pfam02899 gene: Phage_integr_N desc: Phage integrase, N-terminal SAM-like domain. num: 13 42780062 15927238 15926488 15928181 57865838 42518992 57867121 57867260 57867419 44004580 42782202 15925759 15927727 cdd: 8423 xref: pfam02906 gene: Fe_hyd_lg_C desc: Iron only hydrogenase large subunit, C-terminal domain. num: 11 28212003 20807184 20807368 15893326 18311557 15896476 18309258 20807375 18311328 28209953 78043414 cdd: 8489 xref: pfam03060 gene: NPD desc: 2-nitropropane dioxygenase. Members of this family catalyse the denitrification of a number of nitroalkanes using either FAD or FMN as a cofactor. num: 9 56964980 56420407 16079733 70725044 52081616 70727033 73663163 42780557 23098281 cdd: 8627 xref: pfam03480 gene: SBP_bac_7 desc: Bacterial extracellular solute-binding protein, family 7. This family of proteins are involved in binding extracellular solutes for transport across the bacterial cytoplasmic membrane. This family includes a C4-dicarboxylate-binding protein. num: 5 23100317 56419095 23100712 15615313 78044654 cdd: 8628 xref: pfam03481 gene: SUA5 desc: SUA5 domain. The function of this domain is unknown, it is found in yeast SUA5 and its relatives. It is found to the C-terminus of pfam01300 num: 22 56421910 28210066 18311182 15896136 73662077 20806674 57867582 78044541 16080748 29377040 23100449 15616333 42518857 15927690 46908713 81428744 58337082 70725920 52082226 42784497 56965628 28378948 cdd: 8650 xref: pfam03592 gene: Terminase_2 desc: Terminase small subunit. Packaging of double-stranded viral DNA concatemers requires interaction of the prohead with virus DNA. This process is mediated by a phage-encoded DNA recognition and terminase protein. The terminase enzymes described so far, which are hetero-oligomers composed of a small and a large subunit, do not have a significant level of sequence homology. The small terminase subunit is thought to form a nucleoprotein structure that helps to position the terminase large subunit at the packaging initiation site. num: 8 42519312 42518397 29376021 28377532 28378988 56964604 70727568 78044527 cdd: 8652 xref: pfam03601 gene: Cons_hypoth698 desc: Conserved hypothetical protein 698. num: 26 55820910 28379312 29375506 28211482 73662050 57866099 18309111 15902078 24380396 19746028 78045044 15675048 23100861 78043356 25011242 46908380 15899980 76786797 22537283 58337409 15926042 56419425 15672357 42519043 42784325 81428923 cdd: 8655 xref: pfam03608 gene: EII-GUT desc: PTS system enzyme II sorbitol-specific factor. num: 9 46906789 56962929 24378813 28379954 29377748 15613334 28379924 52082153 56965000 cdd: 8660 xref: pfam03631 gene: Ribonuclease_BN desc: Ribonuclease BN-like family. This family contains integral membrane proteins with 5 to 6 predicted transmembrane spans. The family include ribonuclease BN that is involved in tRNA maturation. This family of proteins does not seem to contain any completely conserved polar residues that would be expected in a nuclease enzyme, suggesting that many members of this family may not have this catalytic activity. num: 25 70726074 55821532 76787357 28212101 56964680 42779603 56418955 18309267 81429127 23097645 52079254 16077857 23098330 28377948 24379941 47459210 15615917 25010920 58336949 73662219 15893462 50364915 22537011 15893776 29376707 cdd: 8698 xref: pfam03737 gene: Methyltransf_6 desc: Demethylmenaquinone methyltransferase. Members of this family are demethylmenaquinone methyltransferases that convert dimethylmenaquinone (DMK) to menaquinone (MK) in the final step of menaquinone biosynthesis. This region is also found at the C-terminus of the DlpA protein. num: 4 56420348 15614501 42782380 56965519 cdd: 8702 xref: pfam03745 gene: DUF309 desc: Domain of unknown function (DUF309). This domain is found in eubacterial and archaebacterial proteins of unknown function. The proteins contain a motif HXXXEXX(W/Y) where X can be any amino acid. This motif is likely to be functionally important and may be involved in metal binding. num: 10 16079380 56420827 42783174 15614122 73662565 56963579 52080838 57866963 70726421 15927077 cdd: 8704 xref: pfam03747 gene: ADP_ribosyl_GH desc: ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues. num: 5 78045018 15893631 15902990 15900915 57865613 cdd: 8713 xref: pfam03758 gene: SMP-30 desc: Senescence marker protein-30 (SMP-30). SMP-30, also known as regucalcin, seems to play a critical role in the highly differentiated functions of the liver and kidney and to exert a major impact on Ca2+ homeostasis. num: 4 42781671 56964566 16080373 23098389 cdd: 8724 xref: pfam03773 gene: DUF318 desc: Predicted permease. This family of integral membrane proteins are predicted to be permeases of unknown specificity. num: 5 28210609 15614081 15902849 16077394 15900786 cdd: 8731 xref: pfam03780 gene: DUF322 desc: Protein of unknown function (DUF322). This is a family of small proteins. It includes a protein identified as an alkaline shock protein, so may be involved in stress response. num: 90 81428289 46908047 16079489 15895355 15903667 15902443 57867015 19746191 28210917 29375209 15675703 25011251 15673221 15675649 55821848 52080186 15900359 15902435 18310807 24380207 56419717 57866771 15672173 15895011 23098970 42519404 81427779 25011778 76788491 73662013 15615062 70725857 22537295 58337586 16078646 52080966 57867704 55821953 18310715 29374732 22537293 81428312 56964232 28377758 20807065 28377757 78044020 28378298 25010203 42783302 25011253 81427780 29374733 46907584 20807937 73662856 56964075 70726391 73662538 15927106 15672675 20807740 15675219 70726691 15675221 42782949 22537834 42519424 15927762 19746755 19746811 22536315 76788511 24378739 29375558 15926808 19746189 15901633 29377571 28211247 76787208 76788521 15900352 28378324 56420933 15615349 15673872 55821711 58337607 23099339 cdd: 8741 xref: pfam03795 gene: YCII desc: YCII-related domain. The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. num: 5 24380453 15004742 23100062 16078310 70725449 cdd: 8742 xref: pfam03796 gene: DnaB_C desc: DnaB-like helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerisation of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. num: 4 39938820 39939031 39938827 39938861 cdd: 8752 xref: pfam03809 gene: Hxl6Piso_put desc: Putative hexulose-6-phosphate isomerase. num: 6 54020508 13508231 26554173 15829069 20808352 28379914 cdd: 8765 xref: pfam03829 gene: PTSIIA_gutA desc: PTS system glucitol/sorbitol-specific IIA component. num: 14 24378815 52082151 28379922 28378816 56964998 15613336 29377088 58336978 29377746 46906787 42518754 28379952 56962931 81428085 cdd: 8772 xref: pfam03838 gene: RecU desc: Recombination protein U. num: 37 50365019 42780753 81428529 15828557 71894499 42519121 76788277 54020007 29376002 55820329 15927030 52080739 22536483 16079288 42560951 13357857 15614266 25010363 56963819 73662604 29375725 57866949 24378956 56420702 70726464 78044298 58337443 15616101 23099210 19746569 15902374 15900293 26553698 15675520 47459315 28378432 15672526 cdd: 8774 xref: pfam03840 gene: SecG desc: Preprotein translocase SecG subunit. num: 7 22537626 15674607 19745620 25011591 55820703 76788385 42518801 cdd: 8779 xref: pfam03848 gene: TehB desc: Tellurite resistance protein TehB. num: 12 15900854 42781670 52080381 42781576 15902924 23097769 15614621 76786919 55821525 24380023 25011652 22537700 cdd: 8789 xref: pfam03862 gene: SpoVA desc: SpoVA protein. Members of this family are all transcribed from the spoVA operon. These proteins are poorly characterised, but are thought to be involved in dipicolinic acid transport into the developing forespore during sporulation. num: 32 78043198 56419390 15614133 56420840 28211844 42784295 56963592 56419388 42784297 20807768 15614102 78045004 23098836 15895572 16079399 18311029 15614131 18311027 42783183 56963590 20807770 56420838 56963561 28211846 23098834 52080859 56963563 16079397 15614104 67078265 52080857 15895570 cdd: 8812 xref: pfam03885 gene: DUF327 desc: Protein of unknown function (DUF327). The proteins in this family are around 140-170 residues in length. The proteins contain many conserved residues. with the most conserved motifs found in the central and C-terminal region. The function of these proteins is unknown. num: 4 42780829 15614041 16077098 52078525 cdd: 8821 xref: pfam03894 gene: XFP desc: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase. Bacterial enzyme splits fructose-6-P and/or xylulose-5-P with the aid of inorganic phosphate into either acetyl-P and erythrose-4-P and/or acetyl-P and glyeraldehyde-3-P EC:4.1.2.9, EC:4.1.2.22. This family is distantly related to transketolases e.g. pfam02779. num: 10 28379168 25011879 15673484 42518728 76788198 81427904 15894622 22537938 58336925 28379861 cdd: 8853 xref: pfam03926 gene: DUF335 desc: Putative metallopeptidase (SprT family). This family of uncharacterised proteins may be zinc metallopeptidases. num: 24 76788463 56418770 70725970 22536897 52079014 28377452 19745696 56962594 24379214 15613095 42519599 29375881 15672268 81429178 15902853 57867585 55820742 16077546 25010810 23098089 15900790 73662125 15674669 42779358 cdd: 8888 xref: pfam03961 gene: DUF342 desc: Protein of unknown function (DUF342). This family of bacterial proteins has no known function. The proteins are in the region of 500-600 amino acid residues in length. num: 4 23099038 20807859 15614993 20807553 cdd: 8892 xref: pfam03965 gene: Pencillinase_R desc: Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerisation of the protein. num: 7 52078733 33416279 70726763 57865866 57867413 15925747 56962048 cdd: 8899 xref: pfam03972 gene: MmgE_PrpD desc: MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyses the third step of the 2-methylcitric acid cycle. num: 7 23099723 52082382 16079469 15616485 42781440 16080997 56963571 cdd: 8903 xref: pfam03976 gene: DUF344 desc: Domain of unknown function (DUF344). This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs that are probably functionally important. num: 4 70725486 57865603 42780978 28379117 cdd: 8904 xref: pfam03977 gene: OAD_beta desc: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit. Members of this family are integral membrane proteins. The decarboxylation reactions they catalyse are coupled to the vectorial transport of Na+ across the cytoplasmic membrane, thereby creating a sodium ion motive force that is used for ATP synthesis. num: 10 15675149 19746115 15675155 20808215 24379456 20806773 19746121 20807670 29377765 81428840 cdd: 8905 xref: cd00008 gene: 53EXOc desc: 5'-3' exonuclease; T5 type 5'-3' exonuclease domains may co-occur with DNA polymerase I (Pol I) domains, or be part of Pol I containing complexes. They digest dsDNA and ssDNA, releasing mono-,di- and tri-nucleotides, as well as oligonucleotides, and have also been reported to possess RNase H activity. Also called 5' nuclease family, involved in structure-specific cleavage of flaps formed by Pol I activity (similar to mammalian flap endonuclease I, FEN-1). A single nucleic acid strand may be threaded through the 5' nuclease enzyme before cleavage occurs. The domain binds two divalent metal ions which are necessary for activity. num: 5 15829191 15614743 56963870 71894539 13357976 cdd: 8906 xref: cd00009 gene: AAA desc: AAA-superfamily of ATPases associated with a wide variety of cellular activities, including membrane fusion, proteolysis, and DNA replication. num: 12 76788023 15614942 42518752 26553877 42779257 19746263 56963960 81427647 47459449 42519146 73663491 42518633 cdd: 9028 xref: smart00725 gene: NEAT desc: NEAr Transporter domain; num: 6 28210883 18309202 21392803 10956335 28210882 18309203 cdd: 9184 xref: pfam00580 gene: UvrD-helicase desc: UvrD/REP helicase. The Rep family helicases are composed of four structural domains. The Rep family function as dimers. REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA. Some members have large insertions near to the carboxy-terminus relative to other members of the family. num: 9 56419920 39938801 39938537 39938991 18309405 39939045 39938841 39939013 13508079 cdd: 9238 xref: pfam00874 gene: PRD desc: PRD domain. The PRD domain (for PTS Regulation Domain), is the phosphorylatable regulatory domain found in bacterial transcriptional antiterminator of the BglG family as well as in activators such as MtlR and LevR. The PRD domain is phosphorylated on a conserved histidine residue. PRD-containing proteins are involved in the regulation of catabolic operons in Gram+ and Gram- bacteria and are often characterised by a short N-terminal effector domain that binds to either RNA (CAT-RBD for antiterminators (pfam03123, see also comments for this family)) or DNA (for activators), and a duplicated PRD module which is phosphorylated on conserved histidines by the sugar phosphotransferase system (PTS) in response to the availability of carbon source. The phosphorylations are thought to modify the stability of the dimeric proteins and thereby the RNA- or DNA-binding activity of the effector domain. num: 10 46907015 18309055 56962446 18309056 42519702 52079152 73661690 55820695 15613150 55820694 cdd: 9264 xref: pfam01032 gene: FecCD desc: FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system. num: 126 76788178 42784557 28210665 46908191 28210670 15902979 70725865 15672310 29374839 16077912 18309776 56419995 73662019 81428016 15926325 15894075 20806885 15675632 29374838 76787207 56421435 15925818 15674530 15614149 46908192 28211050 52079519 18309206 15613646 16080385 16077229 42782819 73663380 28379518 15900905 42782820 56965183 16080370 15672311 15616352 52081809 52079520 42783715 57867688 19745540 16077818 15900904 15613645 56965248 52082192 15616351 19746740 15926326 70725866 18309775 56962854 56421434 42784556 25011506 15674529 56965511 28210501 42779762 16080384 15927756 28379519 42782537 23097907 18309794 56965188 28210885 56965247 28378192 46908601 42779763 56418727 16077230 29376195 15927755 19745539 15902980 70727244 23097908 57867689 23098163 46908417 42779531 78043778 16077817 18310024 52082191 73662020 52081824 52081825 78044739 15895707 73663381 70727287 56962855 22537541 42782538 25011507 56418726 56419994 56963602 18310199 15894076 15926288 16077913 15926718 15925817 52081779 70727245 81428015 22537542 15615858 23097715 20808280 52081778 15895260 23098164 15613601 42779530 18309793 15615853 42783495 cdd: 9266 xref: pfam01053 gene: Cys_Met_Meta_PP desc: Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. num: 18 42783500 58337380 56419402 15672763 56419401 55820894 29374929 52079697 78044026 16078253 23098564 28212109 52079696 16078252 56421075 52081206 16079779 28377181 cdd: 9277 xref: pfam01132 gene: EFP desc: Elongation factor P (EF-P). num: 47 31544715 42519705 15828984 26553611 20807730 57867031 39938762 13357858 76786924 15615362 13507768 73662535 54020199 42519425 81427864 70726388 28378297 28211255 29374926 12044876 25011779 22537835 81428288 55821712 50365225 15675650 56964247 15902436 19746756 15672674 18310817 46907581 58337926 24380208 16079501 42560986 52080978 15895364 58337608 47459386 15927109 42783316 15900353 23099350 56420945 71894446 78043474 cdd: 9301 xref: pfam01336 gene: tRNA_anti desc: OB-fold nucleic acid binding domain. This family contains OB-fold domains that bind to nucleic acids. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See pfam00152). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule EC:6.1.1.-. This family also includes part of RecG helicase involved in DNA repair. Replication factor A is a heterotrimeric complex, that contains a subunit in this family. This domain is also found at the C-terminus of bacterial DNA polymerase III alpha chain. num: 11 15927035 73662599 52080744 39938614 56963824 46908129 57866954 16079293 70726459 23099214 15614259 cdd: 9384 xref: pfam02096 gene: 60KD_IMP desc: 60Kd inner membrane protein. num: 13 56420357 15896967 18311639 42784682 56965671 52080933 78043134 56422031 23100949 28209867 16079445 15616626 56965876 cdd: 9386 xref: pfam02120 gene: Flg_hook desc: Flagellar hook-length control protein. num: 5 28211326 23099016 20807883 56419760 56964028 cdd: 9413 xref: pfam02379 gene: PTS_IIB_fruc desc: PTS system, Fructose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). IIB is is phosphorylated by phospho-IIA, before the phosphoryl group is transferred to the sugar substrate. num: 58 13507817 30024014 56420373 56962227 28379832 15900760 81428660 15613391 15901455 12044914 31544872 76786718 29375291 18309566 52080479 15926377 52081852 47459441 22537493 19745929 20808934 58338030 29375313 46906878 26554231 15828600 24379326 46908919 24378634 15928227 42518232 15893526 52080040 73663326 54020218 57866311 76787556 23098293 15674888 42561353 16078504 56964961 46906661 42561366 57865666 26554223 16078266 70727193 42782794 46908505 25011458 56963043 28378719 55820492 42519753 50364997 15902824 56962633 cdd: 9425 xref: pfam02527 gene: GidB desc: Glucose inhibited division protein. This is a family of bacterial Glucose inhibited division proteins these are probably involved in the regulation of cell devision. num: 15 15928176 57865852 70727673 15927722 15928295 42784678 57865944 15926493 57867108 13508297 12045241 15927233 57867247 20807574 42561430 cdd: 9451 xref: pfam02829 gene: 3H desc: 3H domain. This domain is predicted to be a small molecule binding domain, based on its occurrence with other domains. The domain is named after its three conserved histidine residues. num: 22 15675342 15893307 52081269 20807021 25011692 76788340 16079841 28209859 56421138 56963310 28379257 29374893 81429143 19746383 15613779 55820931 46908250 42783563 15901096 22537743 15903157 24378829 cdd: 9505 xref: pfam03551 gene: PadR desc: Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism. num: 62 55821956 56420270 15672291 42780208 15004856 10957150 18311492 18311073 56962780 46906970 56962483 24378678 15894236 28379596 52079803 15893861 76786993 81428254 42783874 18309686 42780149 52078759 29376922 25012028 23100732 56963860 56962378 28379964 81427761 15928278 15674041 42783325 28210335 15613138 56961995 42781638 15612969 15081499 23097849 22538167 42782107 23098403 42782502 42782780 56965773 15616543 15613280 52082385 24380078 28379495 28377096 42781717 29375865 42780501 73661802 18310059 42782240 23098022 42782520 42783130 28377264 42784160 cdd: 9511 xref: pfam03692 gene: UPF0153 desc: Uncharacterised protein family (UPF0153). This family of proteins contain 8 conserved cysteines that may form a metal binding site. The function of these proteins is unknown but might be an Fe-S cluster as part of an oxidoreductase complex. num: 9 78044649 22537576 15674151 28211627 24379160 25011542 23099714 76786732 42779910 cdd: 9561 xref: pfam04002 gene: RadC desc: RadC, DNA repair protein. RadC plays a role in repair of DNA damage after UV and X-ray irradiation in prokaryotes. The E. coli radC gene encodes a RecG-like DNA recombination/repair function. RadC may function specifically in recombinational repair that is associated with the replication fork. num: 4 15081501 42518886 28378902 58337108 cdd: 9570 xref: pfam04011 gene: LemA desc: LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain. num: 26 76787851 15674491 22537768 54020153 42518163 81429231 24380280 20808212 71894139 15829229 31544614 15903206 47459409 56963270 55820780 78044180 29375099 28377403 25011715 28210114 46907194 13357885 26554259 15901144 58336444 19745445 cdd: 9584 xref: pfam04025 gene: DUF370 desc: Domain of unknown function (DUF370). Bacterial domain of unknown function. num: 10 18677778 15894994 52080170 15615076 23098956 42782963 56419701 56964088 78044490 18310731 cdd: 9598 xref: pfam04039 gene: MnhB desc: Domain related to MnhB subunit of Na+/H+ antiporter. Possible subunit of Na+/H+ antiporter. Predicted integral membrane protein, usually four transmembrane regions in this domain. Often found in bacterial NADH dehydrogenase subunit. num: 13 23100563 16080213 73663404 57866494 15926300 23099447 56962562 15613881 70727001 57866279 70727273 56963399 52081656 cdd: 9629 xref: pfam04070 gene: DUF378 desc: Domain of unknown function (DUF378). Predicted transmembrane domain of unknown function. The majority of the family have two predicted transmembrane regions. num: 5 15615907 42784084 56964673 56421461 16080190 cdd: 9633 xref: pfam04074 gene: DUF386 desc: Domain of unknown function (DUF386). This family consists of conserved hypothetical proteins, typically about 150 amino acids in length, with no known function. num: 16 15901526 15894123 76787046 18309169 19745387 15903567 42561090 22536222 15903578 15901515 15829131 31544335 25010111 15901181 54020358 71894218 cdd: 9652 xref: pfam04093 gene: MreD desc: rod shape-determining protein MreD. MreD (murein formation D) is involved in the rod shape determination in E. coli, and more generally in cell shape determination of bacteria whether or not they are rod-shaped. num: 11 28378899 15674212 56964377 15904063 15902021 20807381 15894527 42518889 73662420 18311123 29377519 cdd: 9681 xref: pfam04122 gene: CW_binding_2 desc: Putative cell wall binding repeat 2. This repeat is found in multiple tandem copies in proteins including amidase enhancers and adhesins. num: 15 28211710 28210213 28210492 28211043 28211711 28211507 28210468 28210263 28210260 52082099 28210262 28210414 28210890 28210419 28211605 cdd: 9697 xref: pfam04138 gene: GtrA desc: GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyses the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose. num: 20 58336946 15902960 46908721 28379238 28378110 58337561 15928009 42519471 16080872 81429130 57865364 52079315 73661789 29377112 81429131 52079690 42518253 70725634 56962680 15900883 cdd: 9732 xref: pfam04173 gene: DoxD desc: DoxD-like family. DoxD is a subunit of the terminal quinol oxidase present in the plasma membrane of Acidianus ambivalens, with calculated molecular mass of 20.4 kDa. num: 7 16077617 20808841 15615256 42783477 56964767 15614816 42784491 cdd: 9763 xref: pfam04204 gene: HTS desc: Homoserine O-succinyltransferase. num: 12 55821229 42784579 15901418 52080700 15895101 15614843 15673900 16079250 28210845 56963914 15903477 24379863 cdd: 9774 xref: pfam04215 gene: SgaT_UlaA desc: Putative sugar-specific permease, SgaT/UlaA. This family consists of bacterial transmembrane proteins with a putative sugar-specific permease function, analogous to the IIC component of the PTS system (pfam02378). It has been suggested that this permease may form part of an L-ascorbate utilisation pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate). num: 43 50365458 29375703 23100869 26553902 56965266 54020589 15901943 15926031 15901859 15674379 19746861 13508235 25011895 42560935 56962877 76787525 15612786 29377428 28379544 25010268 76787609 18309505 71894693 24378776 46908820 56962721 71894051 28379851 15903891 20806824 15829065 15675750 42782037 52078939 26554178 22536382 19745339 54020485 56420551 15903979 22537954 56962660 15828669 cdd: 9780 xref: pfam04221 gene: RelB desc: RelB antitoxin. RelE and RelB form a toxin-antitoxin system. RelE represses translation, probably through binding ribosomes (,). RelB stably binds RelE, presumably deactivating it. num: 4 19745671 24380143 15674648 76787326 cdd: 9787 xref: pfam04228 gene: Zn_peptidase desc: Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases. num: 4 19745859 15674820 76787994 22537035 cdd: 9788 xref: pfam04229 gene: UPF0157 desc: Uncharacterised protein family (UPF0157). Also known as GrpB. num: 18 42783213 42781732 15926416 16079424 57866358 73663286 70727151 29375504 42782578 42781864 76786937 73663616 52080887 67078121 15614451 24379783 56965735 28377735 cdd: 9791 xref: pfam04232 gene: SpoVS desc: Stage V sporulation protein S (SpoVS). In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly. num: 15 56963957 56419834 52080302 23099082 42781287 20807817 15895093 20807914 42782861 15614938 15895027 20807117 16078761 78042997 18310653 cdd: 9792 xref: pfam04233 gene: Phage_Mu_F desc: Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956). num: 11 57866774 29376530 28378984 28377535 42518401 16079670 29374974 70727355 52079858 70726600 28211222 cdd: 9798 xref: pfam04239 gene: DUF421 desc: Protein of unknown function (DUF421). YDFR family num: 57 23098832 42780995 20806982 52081627 15614536 28377620 18310330 67078266 15614135 67078007 15613795 42519678 23098683 15613227 52081246 42780807 15614128 58337908 16077621 42784299 28210168 52078724 15896614 15614860 56963588 56963326 16078371 16077781 15893959 15894799 15901670 42783545 15613853 52079801 24380020 56420154 16077620 15614533 15903700 15004850 52079882 23100545 52080523 29375300 15614764 56965731 15004779 42781667 78043994 56962211 81427641 56419392 56965164 16079821 42783276 15674091 28210101 cdd: 9819 xref: pfam04260 gene: DUF436 desc: Protein of unknown function (DUF436). Family of bacterial proteins with undetermined function. num: 24 25010177 15927688 57867674 55821866 15900564 15672471 16080744 23100441 73662079 15675711 52082222 29376489 15902624 76788470 81428965 56965622 42784487 22536288 56421905 19746819 70725922 20807341 15616328 24378611 cdd: 9823 xref: pfam04264 gene: YceI desc: YceI like family. E. coli YceI is a base-induced periplasmic protein. Its function has not yet been characterised. num: 7 70725647 73661800 46907027 15928273 57865771 23098822 56420517 cdd: 9830 xref: pfam04271 gene: DnaD desc: DnaD-like domain. DnaD is a component of the PriA primosome. The PriA primosome functions to recruit the replication fork helicase onto the DNA. num: 9 42782347 29375848 29376639 20809036 42780103 28379002 16079680 52079840 28377516 cdd: 9843 xref: pfam04284 gene: DUF441 desc: Protein of unknown function (DUF441). Predicted to be an integral membrane protein. num: 12 52081416 81428642 42783772 58337222 28378547 56964481 56421272 15615723 15893388 16079967 46907799 29375818 cdd: 9844 xref: pfam04285 gene: DUF444 desc: Protein of unknown function (DUF444). Bacterial protein of unknown function. One family member is predicted to contain a von Willebrand factor (vWF) type A domain (Smart:VWA). num: 11 15893869 15613594 56419022 23100102 78043949 42779686 52079374 56963242 18310315 28210743 16077963 cdd: 9851 xref: pfam04292 gene: GD_AH_N desc: D-galactarate dehydratase / Altronate hydrolase, N terminus. Family members include the N termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyse the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyses D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core. num: 12 56420494 16077320 56962925 15893984 78042792 52078743 78044634 15613053 56962222 16078304 52081816 56962899 cdd: 9853 xref: pfam04294 gene: VanW desc: VanW like protein. Family members include vancomycin resistance protein W (VanW). Genes encoding members of this family have been found in vancomycin resistance gene clusters vanB and vanG. The function of VanW is unknown. num: 14 18310295 42782598 16078932 78042966 52079066 42779750 15893979 56965218 23098821 29376799 28210116 28211421 15614159 20808187 cdd: 9854 xref: pfam04295 gene: GD_AH_C desc: D-galactarate dehydratase / Altronate hydrolase, C terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyse the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyses D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core. num: 12 16077320 56420493 56962925 15893984 52078743 15613053 56962900 78044495 56962222 78044218 16078304 52081816 cdd: 9857 xref: pfam04298 gene: Zn_peptidase_2 desc: Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in all family members by a pattern match. num: 20 28210909 57866968 70726453 16080183 23099226 15927041 15614240 20807947 15613560 73662593 42780730 56963677 15895001 46908152 56419098 42518182 18310724 29376717 52081623 28379631 cdd: 9865 xref: pfam04306 gene: DUF456 desc: Protein of unknown function (DUF456). Putative membrane protein. num: 6 15616369 52081039 57866254 16079558 73663357 23098019 cdd: 9867 xref: pfam04308 gene: DUF458 desc: Protein of unknown function (DUF458). Family of uncharacterised eubacterial proteins. num: 6 52080011 42783081 78043492 20807238 16078475 15893460 cdd: 9868 xref: pfam04309 gene: G3P_antiterm desc: Glycerol-3-phosphate responsive antiterminator. Intracellular glycerol is usually converted to glycerol-3-phosphate in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK) glycerol-3-phosphate activates the antiterminator GlpP. num: 4 70726616 73662772 15926880 57866818 cdd: 9877 xref: COG0001 gene: HemL desc: Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] num: 31 23099520 42779666 70726098 56421177 50812201 18310414 28210451 46907916 52079331 56963090 78044254 15615503 15615605 15893395 15613506 15927246 15613482 56419006 42783598 70726261 46907783 73662406 16079864 23098356 73662238 57867296 52081295 42783246 56964392 15927438 57867136 cdd: 9878 xref: COG0002 gene: ArgC desc: Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] num: 23 23098530 73661530 52079615 20808853 28377414 28377381 16078738 56964323 24379136 15615463 15900885 15672779 46907822 56419325 15895656 78042627 46907665 42783249 15902962 16078184 15925888 57867030 55820547 cdd: 9879 xref: COG0003 gene: ArsA desc: Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] num: 4 57865830 15614358 70725112 42779427 cdd: 9881 xref: COG0005 gene: Pnp desc: Purine nucleoside phosphorylase [Nucleotide transport and metabolism] num: 21 56965482 25011302 24379653 19745960 15895334 20808016 78043229 15902778 15674917 55821129 15614094 76788598 28211201 15614095 29374834 15900718 46908187 78043801 18311477 23099300 22537338 cdd: 9882 xref: COG0006 gene: PepP desc: Xaa-Pro aminopeptidase [Amino acid transport and metabolism] num: 54 55820708 29375257 15674617 70726218 15673631 16078450 15675652 58336767 52079982 42782969 57867213 15615741 15927285 73662368 78044198 58337609 55821714 25011790 24379974 76787569 42518586 15613054 56961802 19746758 29376292 24380211 13508209 23100405 22536870 23099351 25010734 46907809 56964497 81428028 15900124 19745630 42783794 15895365 56964248 15896043 15615363 56421286 78042657 15901433 15672673 15902216 28211256 23099642 23100284 15903488 18311479 15614302 52080979 28378852 cdd: 9883 xref: COG0007 gene: CysG desc: Uroporphyrinogen-III methylase [Coenzyme metabolism] num: 23 56420327 78045040 18310416 57865554 23099110 28210449 56962389 56963385 15893394 52080164 15927976 73663715 70725654 70725417 52078932 15614058 56418948 46907420 16077397 42780623 57865462 78044513 16078625 cdd: 9884 xref: COG0008 gene: GlnS desc: Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] num: 23 15612672 29374701 25010187 15672774 15926205 16077160 15903922 24378828 22536298 15896243 56418618 50365466 15901888 73663537 76787836 57866105 23097551 19745375 15674424 55821786 52078587 70727480 15674035 cdd: 9885 xref: COG0009 gene: SUA5 desc: Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis] num: 47 56421910 54020289 28210066 18311182 15829084 15896136 73662077 50365446 15675120 24379520 15900893 19746090 57867582 25011158 78044541 16080748 13358171 26553519 29377040 23100449 22537233 13508101 47459206 31544343 46908713 58337082 42560705 76787929 15902970 39938501 20806674 24379784 12045114 15616333 55821208 42518857 15927690 55820818 15926567 81428744 15672582 70725920 52082226 42784497 56965628 28378948 71894113 cdd: 9886 xref: COG0010 gene: SpeB desc: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] num: 30 73661435 56963191 42782727 56419900 52082260 56421939 18309533 58337317 58337835 28211455 20807782 16080801 70725724 73663484 23100006 55820960 42781521 57867807 15675847 78044151 78043682 15927914 15613217 19746962 42784543 56965655 52079025 56962950 15614548 56962151 cdd: 9888 xref: COG0012 gene: COG0012 desc: Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] num: 44 22536191 26554480 56422018 46908969 78044617 15926064 12044874 16081144 15902048 23100935 73663684 15674254 31544866 13358160 24378536 76788043 19745204 28379581 47459437 70727630 57865980 18310848 50365475 20808085 71894673 42519766 54020443 15899953 42561432 29377737 42784671 13507765 52082637 28211303 15895403 81427635 58338072 56965865 39938669 15671988 15616613 25010081 15828636 55820107 cdd: 9889 xref: COG0013 gene: AlaS desc: Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 45 28378871 19746355 70726302 58336754 56421091 15927198 57867101 12045148 42783517 15894955 50365429 42560730 71894391 15901237 28210757 25010884 24379123 15903283 78044932 29375946 76788418 52081131 15673706 22536974 47459274 46907732 15613830 15829028 81428001 31544326 73662452 42518570 39938791 13357929 18310762 54020387 20807697 55820540 56963357 15675313 23099464 26554308 16079794 13508158 52081222 cdd: 9890 xref: COG0014 gene: ProA desc: Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] num: 26 42782084 52079811 16078378 15900812 55821682 46907485 15675534 28210745 56963531 29374695 23098508 15896499 20807727 76787205 19746585 22536468 15902877 15614067 24378939 28376989 78042736 52080520 25010348 18311560 15673590 56420584 cdd: 9891 xref: COG0015 gene: PurB desc: Adenylosuccinate lyase [Nucleotide transport and metabolism] num: 36 25010122 56962800 81428269 81429168 42779400 56963851 15927482 29376859 16077712 55820148 24378586 15900001 70726044 19745231 58338135 73662191 23098196 26554034 28379638 76788126 57867388 15673623 42561369 78043887 56418794 42518538 50364890 20807814 15902100 18310650 15674278 15613188 46908003 22536232 15895097 52079128 cdd: 9892 xref: COG0016 gene: PheS desc: Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] num: 43 58337784 71894324 46907440 42561126 50365217 12045046 42783733 56421242 15828819 15926722 19745852 15674814 28211877 55821298 15900489 81428987 25010941 28378265 31544565 78044118 23099586 56964445 29375691 18310868 57866641 47459152 52081371 15615673 24379902 15673911 22537032 54020339 70726824 76788589 15902551 13358021 16079916 73662966 20808115 42519501 13507844 15895624 39939082 cdd: 9893 xref: COG0017 gene: AsnS desc: Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] num: 49 15927035 31544464 28209914 55820868 81428525 13507991 19745677 15896232 57866954 54020192 23099214 15896505 70726459 39939240 42783731 22536704 76787521 15614259 15674654 73662599 15673810 13357925 15901386 12044965 29376869 46908129 16079293 31544443 58337447 15903440 28378421 56420706 26553856 52080744 25010641 56963824 15674719 42560639 15896799 15829242 71894437 50365297 28377778 42519125 19745748 18311482 47459342 24379727 54020547 cdd: 9894 xref: COG0018 gene: ArgS desc: Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 49 42781301 46908732 26554064 58337861 20808887 31544216 15616370 42779117 24380431 52082258 15674020 24380018 47458959 15926285 15901895 78043915 13357838 18310643 15613397 29376964 54019981 15894328 25012094 71894371 70727292 13508295 56965653 73663421 15675893 15828714 81429031 76787802 23100470 28210674 39938941 22538237 57866242 15903931 19746992 56964053 42784538 50365371 55820150 42561129 42518608 28378123 12045239 16080786 56421936 cdd: 9895 xref: COG0019 gene: LysA desc: Diaminopimelate decarboxylase [Amino acid transport and metabolism] num: 31 15673266 56420835 24380094 55820349 16079395 29376071 15925827 70726512 73662659 15893897 15900104 28212040 52080853 46908186 57866856 15614107 15616520 23099288 15902865 58337158 15926980 42780616 15901801 78044590 15903834 20808385 15900800 28378400 18309577 56963566 20806736 cdd: 9896 xref: COG0020 gene: UppS desc: Undecaprenyl pyrophosphate synthase [Lipid metabolism] num: 37 58337543 28210951 23099045 28211040 15895067 15614986 26554404 15902284 22538054 78043658 28378682 15900195 73662817 42782914 16078716 15675763 15674112 52080256 24380152 76787788 15894711 57866734 56419788 18310678 78042817 20807851 70726655 25011942 19746875 46907541 29376987 18310540 56964003 15926843 42519368 55820295 81428871 cdd: 9897 xref: COG0021 gene: TktA desc: Transketolase [Carbohydrate transport and metabolism] num: 50 23099127 56963929 25010342 28211015 15828982 55820407 76787695 50365165 15614915 28379543 13507821 70726566 42782464 15673607 76787960 15675539 54020200 71894203 13358151 16078852 26553903 56962878 15894627 42560914 19746590 46908839 22536462 31544234 15926923 12044918 15901851 26553529 46906582 20806716 46907532 56964227 52080411 28377876 15903883 31544775 56419867 73662725 28379849 56962722 57866841 42782768 46907591 47459388 15894231 24378794 cdd: 9898 xref: COG0022 gene: AcoB desc: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] num: 65 56420912 70725226 73662548 20807176 46907285 15926679 39939087 24378646 70726400 26553961 15903094 57865797 23098868 55821075 56421751 16078523 15927097 16079460 57866607 42783067 23099320 15901028 15672043 73663004 50364855 56964215 23100331 57866997 54020422 56419594 24379825 19746011 70726859 56964184 31544688 71894295 52080060 52079282 56419246 29375921 42560814 56420559 15613340 46907599 29376213 15612777 22537042 52080942 42783279 15615325 12045129 25010950 15829234 16077874 15615217 15614386 42781860 15675026 28378766 13508131 81428694 47459418 76787416 56964549 20806713 cdd: 9900 xref: COG0024 gene: Map desc: Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] num: 10 19746327 24379942 22537010 76788269 15903036 15675287 25010919 15672594 55821533 15900953 cdd: 9901 xref: COG0025 gene: NhaP desc: NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] num: 33 55821619 46907033 15672365 73661706 46908523 81428947 28379181 76787089 22538025 29376137 15926306 73663398 56962784 28379133 58337274 70725623 57866181 70725559 25011915 15902617 57865501 70727262 73661784 28379531 28377665 28211772 15900556 16080395 23100495 42518196 15928018 81427847 15900557 cdd: 9902 xref: COG0026 gene: PurK desc: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] num: 29 15673493 15926651 25010119 22536230 58337823 42779399 24378579 15613187 29376860 56962799 16077711 23098195 28377921 56418793 29376333 70726893 76787880 52079127 81428268 28379222 57866550 73663034 19745228 15899999 15674276 15902098 55820145 46908004 81429169 cdd: 9904 xref: COG0028 gene: IlvB desc: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] num: 68 52082137 28377692 57865631 56421196 42781003 58336733 76788310 15928118 52078967 56963774 28377817 15896417 15900362 23100864 73661642 15673166 22537350 55820962 28379147 23099736 15927787 55821845 29375786 73661391 81428800 58338213 42519901 56964410 15674026 16077501 28377694 24379850 15616435 16080654 70725980 78044561 25011314 78043014 70725462 70725520 57865546 42780591 46906973 16079883 28379894 57867558 23100692 42780032 81429441 15902686 15615623 28379896 42781488 15902445 42519050 15927629 81428593 56418908 46908211 73662133 20806563 23100078 24378741 15673206 46908234 15896885 15900627 52081314 cdd: 9905 xref: COG0029 gene: NadB desc: Aspartate oxidase [Coenzyme metabolism] num: 11 52081267 18309377 78043885 15894311 56421136 42783561 42518137 16079839 56963312 15613781 46908252 cdd: 9906 xref: COG0030 gene: KsgA desc: Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] num: 44 73663572 47459399 20806642 15896238 58336557 78043122 19745394 23097505 15674442 15612620 39939217 54020652 55821771 15901808 15926170 56961852 13508418 18311499 42518291 24378846 42560564 16077110 42779120 57866030 13358166 15828486 28377358 25011861 15903841 52078537 28210013 26554486 12045322 50364820 31544214 70727517 71894379 15672672 56418570 76787342 46906420 81429267 29375520 22537918 cdd: 9907 xref: COG0031 gene: CysK desc: Cysteine synthase [Amino acid transport and metabolism] num: 59 42783501 28211026 56964556 24378980 73663552 19746544 55820893 55820459 15675496 28377182 15926137 56421076 15925820 56961891 24378744 29376146 25010396 70727496 15904056 16077141 57866069 56420060 42780988 20807594 52078568 42779147 23097539 22536517 18310304 57866075 58337517 20808833 16080049 15902017 15895503 70725973 73661561 15894218 56418600 57867574 15612651 46906455 52081207 81428187 23099158 15926190 16079780 56963709 42782316 23098563 15672522 29374928 76787456 58337377 18309159 15615833 15672764 70727548 78043721 cdd: 9909 xref: COG0034 gene: PurF desc: Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] num: 31 20807294 76788351 15674270 73663029 23098201 46907998 15894671 29376328 25010100 57866555 18309665 55820135 16077717 56962805 28211591 15899991 70726888 15902091 56418799 28379217 52079133 19745221 42779405 22536211 81428274 15613193 15926656 58337818 78043394 24378560 15673510 cdd: 9910 xref: COG0035 gene: Upp desc: Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] num: 42 42784485 55820448 15900640 15674535 54020570 46908710 71894325 42518858 18311179 13357673 28210069 57867664 13507772 16080742 70725924 15896133 15616326 28378946 15902699 52082220 15828786 56421903 23100439 22537726 15927686 24380051 42561411 73662081 81428742 56965620 58337083 15673896 19745545 12044880 29377038 26554477 76788496 50364922 25011675 47459373 31544500 20806676 cdd: 9911 xref: COG0036 gene: Rpe desc: Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] num: 52 50365039 26553759 81428309 19745396 42560853 42560936 73662859 15673906 42519407 71894143 76788542 15895007 46906750 52080182 28378321 54020106 22537915 28210915 78043975 23098966 15926805 20807941 29377574 15903839 50365455 46908838 13358019 76788708 26553898 15829154 24378849 46906744 56419713 56964078 16078642 20806711 47459396 42782952 54020595 46908050 15901453 15901806 57866768 58337590 55821769 70726694 18310718 15615065 25011858 46908840 15674444 31544839 cdd: 9912 xref: COG0037 gene: MesJ desc: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Cell division and chromosome partitioning] num: 10 42518314 28210080 26553959 58336584 18309972 20808825 18310476 20806605 20807962 81428404 cdd: 9913 xref: COG0038 gene: EriC desc: Chloride channel protein EriC [Inorganic ion transport and metabolism] num: 42 15893733 18309572 15673080 22537337 55821189 76787723 15673646 15903089 28211625 15901022 15675095 58338211 76786977 81429238 22536719 81429024 24379706 22537265 18310899 25011301 29377468 19745820 58337661 42518114 24379705 15674779 42519899 19746349 46908560 15613226 25011225 29376957 42518535 15675309 18310390 19746063 76787827 81427966 25010655 28377647 29375316 55821191 cdd: 9915 xref: COG0040 gene: HisG desc: ATP phosphoribosyltransferase [Amino acid transport and metabolism] num: 17 52082032 15928265 15894223 56964813 42780599 28379095 24379692 16080545 15673190 23098007 57865757 20808529 15616145 73661739 46906813 78044817 56421611 cdd: 9916 xref: COG0041 gene: PurE desc: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism] num: 31 76786739 16077710 23098194 56418792 58337824 56962798 22536229 15674275 15894669 15613186 15673494 28379223 20807081 46908005 57866541 81428267 15899998 73663035 25010118 18309663 24378578 52079126 15926650 42779398 28211592 70726894 78043950 29376334 55820144 15902097 19745227 cdd: 9917 xref: COG0042 gene: COG0042 desc: tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] num: 38 19745298 57865821 42518373 76788535 46906460 29374908 25011905 24378701 22537964 15896694 18310257 15925793 15673943 23098238 18311449 15904035 56961898 56418608 55820279 50364844 42779507 28379386 28377433 15901996 81429207 20806861 15896446 15674339 28377345 78044326 15612660 58336619 73661474 29377655 16077870 28209975 42560628 70726229 cdd: 9919 xref: COG0044 gene: PyrC desc: Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] num: 21 18310163 25011131 70726714 24379638 15674928 15926784 26553838 15903097 16078614 52080152 19745971 15901032 22537204 42782981 42519203 55821079 58337652 28211974 15615101 76788409 46908069 cdd: 9920 xref: COG0045 gene: SucC desc: Succinyl-CoA synthetase, beta subunit [Energy production and conversion] num: 12 16078672 15926828 52080211 56964046 57866713 70726669 56419743 73662830 23098998 42782928 78043370 15615033 cdd: 9921 xref: COG0046 gene: PurL desc: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] num: 31 76787165 56418798 18309662 58337819 15674269 15673512 20807293 42779404 19745220 56962804 81428273 15902090 52079132 15899990 28379218 22536210 25010099 46907999 73663030 16077716 55820134 15926655 15613192 78044209 28210734 24378558 15894932 57866554 23098200 70726889 29376329 cdd: 9922 xref: COG0047 gene: PurL desc: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] num: 31 76787165 56418797 18309662 70726890 23098199 28379219 15613191 15674269 42779403 20807292 19745220 29376330 15902090 78043830 56962803 15899990 58337820 46908000 16077715 22536210 25010099 55820134 15926654 28210734 15673513 81428272 73663031 24378558 15894932 52079131 57866553 cdd: 9924 xref: COG0049 gene: RpsG desc: Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] num: 44 24378855 76787220 15828900 52078605 50365439 15896388 42560710 31544737 19745404 54020329 58336627 78043518 56961928 15612693 18311391 26553482 15900206 15902293 15926224 23097570 28212178 46908833 71894072 57866146 28377829 22537909 15674243 56418637 42518426 42779187 70727460 25011852 13358088 29374845 39938749 55821762 15674451 16077179 47459203 12044940 13507965 73663518 81429381 20808664 cdd: 9925 xref: COG0050 gene: TufB desc: GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] num: 52 28212176 25010837 56961930 55820570 42779189 29374847 15673843 12045310 18311403 23097572 78045181 52078607 70726940 70727458 15674691 78045164 24379182 54020567 16077181 46908831 15612695 47459059 15672331 76787822 28378740 13508404 22536926 15901337 13358086 26553484 15903386 15896386 39938751 81428673 20808676 15828876 56418639 15900357 71894677 20808662 28212186 57866148 31544430 15902440 42560712 19745719 18311389 42518935 73663516 58337152 15926226 50365437 cdd: 9926 xref: COG0051 gene: RpsJ desc: Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] num: 42 42518428 15674286 15674082 76788080 52078608 58336629 13357790 12045003 56961931 42561271 54020069 78044733 31544254 26554466 15612696 71894654 15902231 16077183 19745240 57867724 15896384 47459069 56418640 18311388 25010132 23097573 70725802 15900144 55821906 39938685 81429378 13507903 42779190 29374850 46908805 50364937 15829061 28377831 73661971 15927831 22536242 20808661 cdd: 9928 xref: COG0053 gene: MMT1 desc: Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] num: 42 46907928 29375447 24379606 15903454 42781406 18309587 56421116 16077699 70725635 28212042 78044334 55821081 15675227 28210718 56963695 28379646 15894379 25011262 16077614 73661790 16077521 56420118 42783540 76788549 20806634 22537304 52079117 15893383 57865363 15893895 28378251 23098578 19746197 15613801 15901395 15673428 15925872 15927995 15613275 46908465 46908594 15672290 cdd: 9930 xref: COG0055 gene: AtpD desc: F0F1-type ATP synthase, beta subunit [Energy production and conversion] num: 54 54020006 54020532 46906331 71894476 42518865 70725933 23100430 47459131 76786779 42784475 73662090 28378938 15927677 81428735 19745847 25010936 13357610 15896119 18311169 15901355 22537026 52082213 55820567 15828921 15828707 16080734 15674808 50364930 46908701 42561147 56965609 15673746 47459043 15903403 15828737 31544861 71894420 24379917 12045261 13508337 15616316 47459002 26553514 56421893 13357686 58337090 42561403 57867649 78043094 31544510 20807130 29377093 71894183 15829170 cdd: 9931 xref: COG0056 gene: AtpA desc: F0F1-type ATP synthase, alpha subunit [Energy production and conversion] num: 54 56965611 50364928 25010934 15896121 42561148 15616318 42518863 56421895 15828706 16080736 22537024 23100432 15829171 46908703 71894422 18311171 31544508 42784477 54020004 57867651 71894182 29377095 15828920 71894477 76787122 26553512 15903405 54020533 47459001 47459132 81428737 31544860 13357689 47459046 55820565 20807128 70725931 13508339 24379919 46906329 15828739 15927679 73662088 78044529 52082215 13357609 15901357 58337088 19745845 15673748 28378940 42561405 12045263 15674806 cdd: 9932 xref: COG0057 gene: GapA desc: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] num: 58 52081405 12045157 56421593 15674228 71894222 47459022 46908632 71894292 42518797 15672541 15903867 28377642 31544515 26554272 22537907 57867169 15616122 20808181 78043763 50365395 29376091 16080447 73663225 18310286 31544766 15893997 16079954 58337019 23099893 29376486 73662387 15927265 56964470 23099615 57866427 28210134 15674453 54019991 15901835 15828517 39938661 76787761 56964785 42783760 25011850 55821760 19745406 42561205 13508169 24378857 56421261 15926449 81428219 42784288 70726239 52081962 15615711 70727114 cdd: 9933 xref: COG0058 gene: GlgP desc: Glucan phosphorylase [Carbohydrate transport and metabolism] num: 11 20808222 15894144 55821045 19746282 15903957 15675244 22537584 25011549 76788379 15901921 24379949 cdd: 9934 xref: COG0059 gene: IlvC desc: Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] num: 21 55821843 57867569 15615621 52081312 56964408 15927631 42781005 15893387 73662131 78042750 20806557 15673208 24378743 16079881 70725978 56421194 23100076 15902447 42780593 15900364 46908213 cdd: 9935 xref: COG0060 gene: IleS desc: Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 46 55820807 56964107 47459242 26554335 28378792 29375585 81428370 16078607 18311523 42518905 15673845 58337125 56419671 22536664 42561115 54020318 42782988 19746464 13508259 70726723 13357972 78043727 15901494 15615108 23098939 28210025 12045204 15829138 15926776 39938670 50365207 52080145 71894569 76788204 25010601 23097817 42781306 31544523 46908248 20808023 15903545 73662887 15675414 24379039 15896289 57866707 cdd: 9936 xref: COG0061 gene: COG0061 desc: Predicted sugar kinase [Carbohydrate transport and metabolism] num: 46 13357735 52079664 15900966 15615761 78043064 23098676 76786881 42560850 20807749 46907200 15672345 56421327 15615411 15903049 81429052 70726952 26553912 73663087 31544749 13508006 29377152 16078226 55821441 28211239 57866556 46907817 19746075 50365009 28378820 42783824 18310799 52081445 42780395 56419365 24379483 22537252 23099651 15926595 12044980 42518749 56964284 15675106 15895345 16080006 58336972 25011212 cdd: 9937 xref: COG0062 gene: COG0062 desc: Uncharacterized conserved protein [Function unknown] num: 8 78043971 56962072 56420032 23098075 20808554 15893781 28212095 18309274 cdd: 9938 xref: COG0063 gene: COG0063 desc: Predicted sugar kinase [Carbohydrate transport and metabolism] num: 9 70725008 15925712 28212095 15672241 46907852 15902774 73661316 15893781 57865925 cdd: 9939 xref: COG0064 gene: GatB desc: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal structure and biogenesis] num: 43 28377927 81429159 12044952 20807103 15675614 42519591 42779432 58336860 28211982 19746722 71894115 42561286 52079164 56962870 15900354 15895927 22537807 13358108 70726054 25011751 30023976 56418818 26553664 47459211 78043368 31544810 50364978 57867371 54019989 55821601 73662201 29375322 15828672 13507977 15613230 15902437 15896229 15927473 23098221 24380183 46907984 50812194 76788437 cdd: 9941 xref: COG0066 gene: LeuD desc: 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] num: 21 24379787 15901116 78043571 16079877 15615617 57867573 55821209 42780597 23100072 78043773 15673203 52081308 15927635 20806560 70725974 73662127 56421190 15896420 46908217 56964404 15903176 cdd: 9943 xref: COG0068 gene: HypF desc: Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] num: 4 20806660 15894097 78043515 15004849 cdd: 9944 xref: COG0069 gene: GltB desc: Glutamate synthase domain 2 [Amino acid transport and metabolism] num: 25 23098152 70725595 23100554 16078906 56963800 15894950 57865427 15926149 73663593 15928038 42782724 78044110 78044813 20807301 23100863 56419966 24378862 73661748 15673268 70727539 42779665 52080533 16077727 46907964 15614291 cdd: 9946 xref: COG0071 gene: IbpA desc: Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] num: 34 16079282 78044842 39938514 15613043 28212053 81427665 73661813 42782690 16077622 42781354 56418791 15896945 16078986 70725663 52080732 78044356 56420694 73661812 42781343 42518267 15614835 28379177 20808928 15927965 28379699 56420681 28377077 56963909 58336546 16078860 23100149 52080846 52080419 78043114 cdd: 9947 xref: COG0072 gene: PheT desc: Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] num: 44 19745853 15674815 55821296 13507845 28211876 76786957 39939084 54020338 15900491 42783732 70726823 12045047 73662965 24379900 15615672 71894322 29375692 78045124 16079915 46907441 15926723 56964444 23099585 18310867 42561125 26554375 56421241 47459351 28378266 25010943 52081370 22537034 15673910 15828818 58337783 15895623 31544566 50365216 57866642 20808114 81428986 15902553 13358020 42519500 cdd: 9948 xref: COG0073 gene: ARC1 desc: EMAP domain [General function prediction only] num: 92 19745853 15674815 13357750 71894631 42783880 28211876 50365406 54020338 55821820 15900491 28378179 42561214 24380018 70726181 70726823 12045308 73662965 15902740 81428250 71894322 29375692 78045124 16079915 46907441 81429270 15927319 76787347 15674551 58336554 28377354 67078135 56421241 15901735 47459351 19745562 28378266 25010943 22536362 56421352 42519541 52081482 15828818 73662330 15903768 58337783 15614348 31544566 50365216 47459366 15902553 42519500 15900681 25010251 55821296 15672774 15672372 13507845 76786957 23100629 15828957 42783732 24380314 39939083 12045047 56964534 23099688 24379900 15615672 58337843 13508402 16080034 19745295 15926723 56964444 23099585 26554390 18310867 42561125 31544432 26554375 29377487 52081370 22537034 15673910 46907838 57867176 15895623 57866642 20808114 81428986 15615813 13358020 cdd: 9949 xref: COG0074 gene: SucD desc: Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] num: 12 42782927 52080212 57866714 70726668 15926829 56419744 73662829 78042669 23098999 56964045 16078673 15615032 cdd: 9950 xref: COG0075 gene: COG0075 desc: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] num: 24 15672472 15893513 26554387 23100080 15893312 15613325 16080305 28377577 15927300 57867244 20808959 29377456 78044898 18309035 42781563 56965499 56965054 28211354 42780514 70726202 18309836 28210418 52081739 73662349 cdd: 9951 xref: COG0076 gene: GadB desc: Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] num: 16 18311040 28211470 15673272 28211154 42781749 15615186 52078864 28379751 20809014 56420250 52079426 29375235 15613129 46908534 52079592 46908605 cdd: 9952 xref: COG0077 gene: PheA desc: Prephenate dehydratase [Amino acid transport and metabolism] num: 22 15673724 78043952 73662185 42783571 70726038 52082520 52081270 15613778 55820726 29376131 23099496 15927489 15893510 56421139 15901223 46907764 57867402 16079842 24379244 56963309 20807492 15903270 cdd: 9953 xref: COG0078 gene: ArgF desc: Ornithine carbamoyltransferase [Amino acid transport and metabolism] num: 46 81427681 15672783 78044926 76788253 28377418 20807033 42561229 15615457 25012120 15926752 23097915 73661541 70725259 57865702 26554061 52079621 15903998 25012159 15675442 52082445 46907818 19746492 15893608 29374756 22538299 24378770 18309151 46906267 56419331 15674018 57865669 16078190 55820682 42779553 22538260 42783245 29375327 81427985 13508045 29377064 15673682 56964317 15901962 24379043 15928220 76787258 cdd: 9954 xref: COG0079 gene: HisC desc: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] num: 33 15673188 73661737 56420797 57866322 15894648 15614228 46908158 46907387 18310022 52080770 28379087 42780719 23098000 16079319 15928263 42782052 23099237 78043446 28210443 56963666 20808527 78044277 56420733 24379694 73663304 18310355 15614152 15926401 70727168 20806892 15896282 42519260 78045156 cdd: 9958 xref: COG0083 gene: ThrB desc: Homoserine kinase [Amino acid transport and metabolism] num: 28 46908717 15903261 15894518 16080277 52081718 78043253 15615982 29376914 58337493 24379408 56964704 20808963 57866813 42781121 25011237 15926911 73662745 28211950 70726578 22537277 23097919 15673142 56421497 58337452 55820553 28377454 15901214 76788454 cdd: 9959 xref: COG0084 gene: TatD desc: Mg-dependent DNase [DNA replication, recombination, and repair] num: 35 76787488 47459398 19745392 52078534 50364862 15901814 81429269 56961849 22537921 24378839 16077107 15926168 13357573 46906417 15894676 29375518 57866028 15674440 71894378 73663574 15903847 23097502 28210010 15828485 70727519 15672669 55821773 15829007 12044859 15612617 28377356 13507748 54020653 25011864 15896241 cdd: 9960 xref: COG0085 gene: RpoB desc: DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] num: 44 15901784 31544417 57866134 81429387 25010231 15673782 42518422 18311395 47459116 46906495 76788022 42779183 70727464 12045200 19745277 26553531 42561522 54020629 29377682 20808668 15896392 13508255 13357745 55821840 78043606 39938746 73663522 28212181 15829017 16077175 58336623 15674321 52078601 15612689 56961924 24380333 15926220 22536344 28377825 23097567 71894497 50365415 56418633 15903819 cdd: 9961 xref: COG0086 gene: RpoC desc: DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] num: 44 29377681 50365414 47459117 15901783 18311394 16077176 13508254 54020628 31544418 58336624 71894496 23097568 46906496 15612690 78044548 26553532 42518423 28377826 39938747 52078602 12045199 56961925 15674322 25010232 56418634 15829016 15896391 42561523 73663521 42779184 19745278 81429386 15903818 76787132 28212180 22536345 55821839 24380332 57866135 13357746 15673781 20808667 15926221 70727463 cdd: 9964 xref: COG0089 gene: RplW desc: Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] num: 39 55821903 20808658 13507906 70725805 28377834 15612699 58336632 12045006 23097576 47459072 29374853 15674289 76787401 22536245 13357793 19745243 71894651 31544257 18311385 15829057 57867715 16077186 42518431 78042721 15896381 56961934 46908802 50364940 15900147 73661974 25010135 15927828 54020072 15674079 39938688 81429375 42779193 15902234 26554463 cdd: 9965 xref: COG0090 gene: RplB desc: Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] num: 43 12045007 58336633 57867714 15612700 47459073 52078612 13507907 15902235 71894650 42561267 20808657 54020073 46908801 28377835 15674290 42779194 26554462 31544258 23097577 28212173 22536246 56961935 25010136 73661975 18311384 78042708 50364941 56418644 15674078 16077187 15900148 55821902 76788180 70725806 39938689 81429374 15896380 15829056 19745244 15927827 13357794 42518432 29374854 cdd: 9967 xref: COG0092 gene: RpsC desc: Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] num: 44 31544261 15927824 42561264 15902239 15612703 15674075 19745247 42779197 25010139 71894647 28212171 18311381 15829052 24380363 13357797 81429371 73661978 56961938 57867711 52078615 47459076 46908798 39938692 12045010 26554457 42518435 50364944 23097580 78044912 13507910 16077190 55821899 15896377 15674293 76787747 20808654 70725809 54020076 29374857 22536249 58336636 28377838 56418647 15900151 cdd: 9969 xref: COG0094 gene: RplE desc: Ribosomal protein L5 [Translation, ribosomal structure and biogenesis] num: 44 42779203 18311375 28377844 42518441 15674299 26554453 47459082 78043652 56961944 46908792 71894641 76787491 13357803 52078621 16077196 15927818 24380357 15674069 56418653 25010145 42561257 20808648 15612709 54020082 58336642 15902245 12045016 22536255 28212166 31544267 57867697 15896371 81429365 15900157 19745253 13507916 73661984 23097586 29374863 70725815 55821893 15829046 39938698 50364950 cdd: 9970 xref: COG0095 gene: LplA desc: Lipoate-protein ligase A [Coenzyme metabolism] num: 82 54020454 78042941 73663432 70726932 28377372 42560812 70725264 28379157 20806818 50364853 29375720 23098629 15613246 15926029 76787725 29377217 52079509 31544685 19746015 15926615 15828914 22537214 71894084 52080986 15675184 15675178 56965667 56963378 19746153 12045126 22537045 19746147 57866186 73662531 25010953 46908737 46907165 26554319 16078089 15615375 57866603 15903091 54020046 25011147 16080816 70727402 46907003 39938795 28379226 42783330 81429245 15901025 42780264 28211666 47458893 15616384 29375250 52082273 15927113 15675030 42784560 15926267 55821042 22537220 56421949 76786820 23098738 13508128 56964256 76788326 81428545 16079509 15672045 73663066 23100476 57867043 42561060 15828503 70726384 24378649 56420955 25011141 cdd: 9972 xref: COG0097 gene: RplF desc: Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] num: 44 16077199 15927815 15902248 20808645 22536258 42779206 15896368 55821890 15612712 52078624 23097589 15900161 12045019 28377847 56961947 24380354 70725818 18311372 46908789 19745256 15829043 57867694 26554450 13507919 42561255 42518444 28212164 78042739 31544270 29374866 71894638 81429363 25010148 15674065 50364953 76788281 73661987 56418656 39938701 54020085 58336644 47459085 15674302 13357806 cdd: 9973 xref: COG0098 gene: RpsE desc: Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] num: 43 39938703 78044312 19745258 15902250 15612714 26554448 18311370 12045021 55821888 15900163 22536260 56961949 46908787 31544272 71894636 13507921 70725820 50364955 15829041 15896366 52078626 20808643 13357808 42779208 15927813 23097591 81429361 25010150 28377849 58336646 15674304 56418658 24380352 57867692 42518446 15674063 29374868 73661989 54020087 16077201 47459087 42561253 76786980 cdd: 9974 xref: COG0099 gene: RpsM desc: Ribosomal protein S13 [Translation, ribosomal structure and biogenesis] num: 44 18311361 56961957 22536267 42561248 23097598 15896358 26554442 13507928 57867677 28212157 15829034 15902257 56418666 73661996 78043008 71894586 12045028 55821881 58336653 46908780 28377856 20808635 15612723 81429354 52078635 31544834 15674052 15927806 13357815 76788115 70725827 29374875 19745265 24380345 47459094 15900170 15674311 39938711 42779216 42518453 50364963 54020093 25010157 16077209 cdd: 9975 xref: COG0100 gene: RpsK desc: Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] num: 44 47459095 15900171 52078636 71894585 42518454 56961958 39938712 76788241 28377857 46908779 20808634 31544833 13357816 28212156 15902258 15674312 19745266 55821880 12045029 25010158 73661997 15896357 81429353 16077210 26554441 56418667 23097599 15612724 29374876 42779217 50364964 15927805 78045178 58336654 54020094 70725828 24380344 13507929 18311360 57867676 22536268 42561247 15829033 15674051 cdd: 9976 xref: COG0101 gene: TruA desc: Pseudouridylate synthase [Translation, ribosomal structure and biogenesis] num: 42 16077216 24378608 39938715 42518460 70725835 25010174 18309973 19746822 28211488 15903494 22536285 23097605 50364970 15927799 13358100 12045035 55820220 28212149 56418673 76787537 46908770 42561241 31544780 28377870 58336660 26554422 18311353 13507935 78045100 42779223 81429336 15612730 15896350 15901439 15675714 56961964 52078642 42779623 15672468 20808627 73662003 57867747 cdd: 9981 xref: COG0106 gene: HisA desc: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism] num: 17 52082028 15616141 78043937 15928260 73661734 23098003 24379686 56964809 56421607 28379091 42780603 15894227 15673195 16080541 57865753 46906809 20808524 cdd: 9982 xref: COG0107 gene: HisF desc: Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism] num: 17 56421606 24379685 15616140 16080540 15928259 73661733 57865752 78044843 28379090 15894228 15673196 23098002 46906808 42780604 52082027 20808523 56964808 cdd: 9984 xref: COG0109 gene: CyoE desc: Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones] num: 14 15926701 16078552 56964666 23098705 57866667 52080091 46908292 73662982 15615179 16078273 56419616 23098891 70726837 42783040 cdd: 9985 xref: COG0110 gene: WbbJ desc: Acetyltransferase (isoleucine patch superfamily) [General function prediction only] num: 71 58336792 46908652 56420456 42784310 15895378 15926439 42782428 52079237 81429477 81427837 73663264 20807157 15615563 42781715 70727128 56421699 52082036 73661404 52079703 29377421 55821111 81427669 56421613 42519094 76787199 25010978 28379086 15928134 57866406 15900019 58337498 15673963 28379249 22537076 28379863 16080549 81428850 28379328 42782609 16081137 15925860 28378580 23098519 15673269 28210627 29374892 56964815 15673486 26553623 76788441 15616148 23099933 73661615 15903009 18311569 25011100 29375644 15673662 28377302 70725500 23100342 46906914 78042659 15894064 28379343 46906665 15675057 42781097 15895610 15895950 22537171 cdd: 9986 xref: COG0111 gene: SerA desc: Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] num: 45 15927436 57867294 56963092 23098299 23100299 20808958 73662695 81428533 15672586 46909013 15613512 73662240 70726100 46907915 73662348 15927301 15673970 18309036 20807040 29377365 56963608 70726201 15893385 52081995 16078917 28377138 56418922 57867245 76786837 28379274 15893313 24380031 23100274 56420782 55821503 23100081 16079364 15893656 25011659 15614165 22537708 28210417 78044181 42782337 52080816 cdd: 9987 xref: COG0112 gene: GlyA desc: Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] num: 42 20808520 52082221 55820819 16080743 42784486 15675122 19746092 15895532 15902972 26553727 15828810 70725923 15616327 28378947 76787605 23100440 15927687 25011157 71894321 15900895 54020057 58336600 78045069 18310911 39938667 81428743 42561412 31544494 13508315 12045256 73662080 57867665 22537232 56965621 24379519 50364921 15672583 56421904 46908711 29377039 42518350 47459306 cdd: 9989 xref: COG0114 gene: FumC desc: Fumarase [Energy production and conversion] num: 15 46908459 42519275 57867269 42780911 56963511 52081791 15614008 56418785 15927425 58337210 28377900 70726112 16080357 23098587 73662253 cdd: 9990 xref: COG0115 gene: IlvE desc: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] num: 16 76788312 73663314 70727182 55820835 15895494 15900566 19746894 15926392 23098157 22537671 15612655 46908936 15673296 25011625 15675780 15902626 cdd: 9991 xref: COG0116 gene: COG0116 desc: Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] num: 31 56420078 23099204 73662608 70726468 15900296 22536487 57866937 52080724 16079275 56963776 15673633 81428532 46908119 15927025 15675517 25010366 15902377 42519118 15893515 18310830 55820332 58337440 15614334 19746566 78044996 28210173 28378435 42780764 76788104 24378959 29375728 cdd: 9992 xref: COG0117 gene: RibD desc: Pyrimidine deaminase [Coenzyme metabolism] num: 22 23097878 70726154 56420832 28210395 78043574 15893879 52080843 15614117 67078030 73662304 56965745 15672975 76788660 16079385 22536910 18309548 25010822 15927345 42783225 15902208 15900115 57867218 cdd: 9993 xref: COG0118 gene: HisH desc: Glutamine amidotransferase [Amino acid transport and metabolism] num: 17 73661735 15894226 57865754 24379687 46906810 15616142 20808525 16080542 15928261 15673194 52082029 78043511 23098004 56964810 42780602 28379092 56421608 cdd: 9994 xref: COG0119 gene: LeuA desc: Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] num: 37 16079880 15893565 15903180 42780594 56420136 23100685 55821212 56962323 20806558 24379790 52080513 70725977 78042646 56421193 42781223 52081311 15927632 15896422 23100075 15894257 15901118 78044450 78044757 23098798 15613697 20806978 15893552 73662130 57867570 15615620 16078884 42781612 15926566 78044251 15893553 46908214 56964407 cdd: 9995 xref: COG0120 gene: RpiA desc: Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] num: 25 55821133 70725721 24379658 42518723 58336914 28377270 22537341 73661877 15927916 29374843 56965115 25011305 15674914 15900715 23100154 42781879 28377480 23100064 15894710 46907208 15902775 76787126 15674215 19745957 81429297 cdd: 9997 xref: COG0122 gene: AlkA desc: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] num: 14 15895964 28212004 56418963 16077248 42779621 20807070 42782824 15614312 56964916 18311275 16077868 15828566 73661598 52079265 cdd: 9999 xref: COG0124 gene: HisS desc: Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 47 15901936 78044066 73662437 81428473 15903972 15927211 13357845 47459108 71894452 15903011 42519262 15613814 56421108 24380435 31544388 28211584 22538242 15828804 18310916 56963341 19746998 76788408 46907748 15895997 28378623 42783532 29376493 26553740 52081235 12044885 39938613 54020360 25012099 20807682 13507784 50365183 56965072 15673949 16079810 58337235 57867126 42560881 23099475 55821938 15675899 70726291 42782401 cdd: 10000 xref: COG0125 gene: Tmk desc: Thymidylate kinase [Nucleotide transport and metabolism] num: 56 76787087 56418559 39938876 78044441 31544925 25011992 29375651 39938558 12044856 24380041 25011666 47458911 28209987 26554269 39939038 56961832 55820572 39939133 16077096 23097491 16079087 54020350 42779109 20806623 28377570 15828523 39938916 15674539 39939007 81427954 15612605 22537716 39938716 50365491 39938860 29377238 39939030 58336718 15926159 15902879 22538103 52078523 39939174 15900815 13507745 73663583 57866011 19745549 15672380 39938830 46908871 70727528 71894076 42560606 13357576 42518522 cdd: 10002 xref: COG0127 gene: COG0127 desc: Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism] num: 23 22537739 15926735 15895923 55820353 56421200 76787573 15673263 46907458 25011688 15901708 56964416 73662953 15613723 29375698 16079888 78043192 23099560 19745520 15674512 52081337 24380091 15903737 15615629 cdd: 10003 xref: COG0128 gene: AroA desc: 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] num: 21 70726449 22536803 18309678 23099235 15614230 15894182 16079317 24379242 73662589 56182546 57866972 25010674 15927045 15615276 29376129 76788268 15673726 42782050 19746325 15675285 46908156 cdd: 10005 xref: COG0130 gene: TruB desc: Pseudouridine synthase [Translation, ribosomal structure and biogenesis] num: 40 15895081 13357914 31544323 18310665 15926854 15829021 22537158 25011087 81428853 42782898 71894576 56419801 24379575 15673108 70726643 23099056 55821028 76788553 15903135 47459301 20807837 28378665 28210964 56963990 16078729 58337532 57866761 19746180 15675211 52080273 73662803 50365098 15614973 15901075 42519357 46907554 39938723 42560883 78045042 54020337 cdd: 10007 xref: COG0132 gene: BioD desc: Dethiobiotin synthetase [Coenzyme metabolism] num: 10 15928005 28211497 15894640 56421552 57865791 18310525 52079202 15613346 16080073 42783234 cdd: 10008 xref: COG0133 gene: TrpB desc: Tryptophan synthase beta chain [Amino acid transport and metabolism] num: 22 73662683 50812257 15673445 42780435 56420735 46907858 20808007 23097977 57866893 56420637 15901641 52080772 24379019 55821564 56963664 70726538 28378349 15614226 15926952 78044818 15896406 15903674 cdd: 10009 xref: COG0134 gene: TrpC desc: Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism] num: 17 55821566 56420737 42780433 70726540 57866891 73662685 15614224 15896408 15901643 20808009 56963662 15926950 15903676 46907860 24379017 15901184 78044030 cdd: 10010 xref: COG0135 gene: TrpF desc: Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] num: 22 42780434 57866892 70726539 50812258 73662684 20808008 78042757 15673448 81427868 15903675 23097978 15901642 55821565 24379018 56420736 15896407 52080773 56963663 46907859 28378348 15926951 15614225 cdd: 10011 xref: COG0136 gene: Asd desc: Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] num: 31 42781527 56963981 70726518 42782888 18310886 52080282 15926974 15673604 58337164 15614964 16078738 22537209 57866850 73662665 24379429 76787650 15893858 15900885 15893320 29375758 23099065 28211890 46907665 28379104 55821302 25011137 15902962 28378089 78044721 56419810 20807315 cdd: 10012 xref: COG0137 gene: ArgG desc: Argininosuccinate synthase [Amino acid transport and metabolism] num: 25 23100584 24378832 28377631 22536310 15902146 18309673 55821785 57866474 76788242 52081436 15615749 73663123 16079997 70726990 46908325 42783811 20808849 56421292 56964502 78044946 15926550 28210299 15894260 30023975 25010198 cdd: 10015 xref: COG0140 gene: HisI desc: Phosphoribosyl-ATP pyrophosphohydrolase [Amino acid transport and metabolism] num: 19 23098001 56964807 46906806 15928258 16080539 20808522 78044810 28210185 70726789 24379682 56421605 15673197 42780606 52082026 73661732 57865743 15616139 28379088 15894230 cdd: 10017 xref: COG0142 gene: IspA desc: Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] num: 29 81428294 15903130 15672839 22536677 20807745 23099332 56964228 24379060 57867011 28211243 15901068 19746452 16079484 52081669 15927102 15675402 25010613 58337602 46907589 29375563 42519419 18310802 15895350 76787307 28378303 55821223 16080222 78044434 73662542 cdd: 10018 xref: COG0143 gene: MetG desc: Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 46 25011651 12044871 15900681 15672774 78044237 42518288 42779117 76788328 24380018 15896243 47459150 15902740 15612616 54020190 52078533 57866027 42784223 23097501 55820534 22537699 81429270 13507762 16077106 29375514 13357755 26554387 15674551 58336554 28377354 31544361 15926167 19745562 18311505 50364851 28210009 56418566 56961843 42560572 20806639 18311506 71894319 46906409 73663575 70727520 15828961 39938719 cdd: 10019 xref: COG0144 gene: Sun desc: tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] num: 49 25011082 55821033 56964082 76787905 16078637 22537153 20807946 42519411 22536500 55821413 76787603 24378967 19746552 15903621 42560767 20808537 58337594 70726699 28378317 15895002 18310723 23098962 46908054 52080177 28210910 56420302 15926800 15901566 29377578 58337462 78042686 50365012 15615070 56419708 28378408 25010379 81428305 78045097 15673871 57866755 42519213 15901256 42782957 15675503 15903302 73662864 19746175 15675206 24379570 cdd: 10020 xref: COG0145 gene: HyuA desc: N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] num: 12 52078843 56421429 78043863 56965075 52080360 78043707 29377718 15614444 15614447 20808940 20807581 46906708 cdd: 10022 xref: COG0147 gene: TrpE desc: Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism] num: 43 52078569 78043043 28378344 46907863 15926391 15673452 15675780 15896411 73663315 15612653 57866888 15614222 23097982 15903679 18309999 16077142 56420739 56961892 15901646 20808012 76788312 73662688 55820835 52080776 42779148 23098157 70727183 56418601 15902626 16079325 42780430 24379014 15900566 55821569 19746894 78045113 22537671 15926947 46908936 56963660 15673296 25011625 70726543 cdd: 10023 xref: COG0148 gene: Eno desc: Enolase [Carbohydrate transport and metabolism] num: 48 15926453 12045269 42784284 71894034 28210138 23099889 31544709 46908628 81428222 29376483 28377645 22536801 57866440 73663221 42519286 42560801 78042740 20808178 70727110 24379669 15894001 26553826 15672258 16080443 15900994 15616118 56421589 18310281 15674785 56964781 25010672 58337194 54020356 50365285 76788358 28378568 52081958 42519171 15672626 13508345 15828989 15903080 19745827 13357742 47459015 42518800 55820714 39938770 cdd: 10024 xref: COG0149 gene: TpiA desc: Triosephosphate isomerase [Carbohydrate transport and metabolism] num: 14 26553473 13508368 46906586 47459254 19745720 15674692 13357739 55820571 54020428 24379183 29376484 39938656 12045291 15828929 cdd: 10025 xref: COG0150 gene: PurM desc: Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism] num: 31 76787420 15673506 15894672 56962806 20807085 58337817 29376327 28379216 46907997 81428275 23098202 56418800 70726887 15613194 28211590 16077718 78044305 55820136 42779406 15902092 15674271 73663028 57866563 24378562 15926657 15899992 19745222 18309666 52079134 22536212 25010101 cdd: 10026 xref: COG0151 gene: PurD desc: Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] num: 32 23098205 73663025 24378576 22536228 25010117 70726884 15613197 16077721 15926660 81428278 15902096 56962809 29376324 15899996 15674655 56418803 15894675 42779409 18309669 20807088 57866566 78044438 55820143 28379213 58337814 46907994 28211587 19745226 15673495 52079137 15674274 76788387 cdd: 10028 xref: COG0153 gene: GalK desc: Galactokinase [Carbohydrate transport and metabolism] num: 22 20808963 28379798 18310327 24379339 20808332 15896212 42518784 52082564 16080871 58337726 56420685 29375647 67078216 15901681 81428378 55821389 15673965 56964983 73661938 28210581 15613670 15903710 cdd: 10030 xref: COG0155 gene: CysI desc: Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] num: 12 18309529 16080396 70725416 42780621 23099109 56962393 57865555 73663716 15893390 56419945 52079707 15613173 cdd: 10031 xref: COG0156 gene: BioF desc: 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] num: 17 52079201 57865789 15928002 47459413 16078763 15616469 56420663 15926228 73663514 16080074 20808769 23100509 70727456 42783233 52080306 81428122 42779766 cdd: 10034 xref: COG0159 gene: TrpA desc: Tryptophan synthase alpha chain [Amino acid transport and metabolism] num: 13 15614227 15926953 46907857 78044192 24379020 15896405 23097976 20808006 73662682 56963665 70726537 57866894 42780436 cdd: 10035 xref: COG0160 gene: GabT desc: 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] num: 19 15613482 42779435 23098716 15613554 15615187 28378405 15893659 73661496 70725460 16077458 23097973 52079591 15928190 73661662 15894706 57865635 56962115 52078920 56964761 cdd: 10036 xref: COG0161 gene: BioA desc: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] num: 18 42780801 52080670 23097945 56421551 42781391 15894641 15613598 15613345 57865790 16080075 56419962 15928004 52079200 16077991 16079032 56965544 15614823 42783235 cdd: 10037 xref: COG0162 gene: TyrS desc: Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 50 15615790 42561212 29376289 29375234 78043825 15672367 24380335 56964522 15903951 15927306 15674319 39938955 12045314 57867255 13508408 22536342 13357674 15901915 50365404 16080019 15894067 58336534 46907828 19745275 52079102 42518261 15893925 56421338 25010229 54020016 47459382 28379288 42784257 20809023 71894632 28212031 70726193 26554251 42783842 18309634 55821068 23099673 73662343 76786955 16080897 31544493 15828956 52081467 81428383 55821842 cdd: 10038 xref: COG0163 gene: UbiX desc: 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism] num: 7 56962407 78042631 52078874 16077431 81428196 28377196 15614214 cdd: 10039 xref: COG0164 gene: RnhB desc: Ribonuclease HII [DNA replication, recombination, and repair] num: 36 23098995 70726670 42519032 15615038 46907500 29376207 24379434 56964049 15675138 58337276 15903088 15926827 16078669 15901021 25011101 22537172 55820934 42782929 73662831 18310688 28210941 20807898 28378510 78044826 56419740 15673275 47459459 76787278 15895039 42560965 57866704 19746108 50365354 26554469 81428604 52080208 cdd: 10040 xref: COG0165 gene: ArgH desc: Argininosuccinate lyase [Amino acid transport and metabolism] num: 27 15672107 42783810 28210300 70726991 56964501 15902147 23100583 15615748 15926549 25010199 20808848 73663124 57866473 24378833 16079996 52081435 15894261 56421291 46908326 42782614 18309672 22536311 55821784 28377632 76787571 78043504 56963252 cdd: 10041 xref: COG0166 gene: Pgi desc: Glucose-6-phosphate isomerase [Carbohydrate transport and metabolism] num: 41 81428789 15615905 58337066 12044963 15926551 46908538 26553920 15674409 15674150 19745362 42561040 55820292 31544840 24378809 15903923 70726989 13507989 29375983 25010510 71894495 18311249 28379049 16080187 28211992 15901889 50365070 52081630 54020574 22536585 47459389 39938769 15828602 20808223 56964670 78043246 23099791 57866475 42518849 76787153 15895938 73663122 cdd: 10042 xref: COG0167 gene: PyrD desc: Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] num: 35 15902910 15615097 57865607 28210641 28210533 22536686 20807966 76787324 15675344 23098948 55821214 42519206 56964096 28379199 58337655 81428060 70725472 73661587 28211971 55820990 24379073 26554241 56965540 15902716 15928168 56419957 15895908 18310160 24379647 78042999 25010622 15900658 29374924 15900841 19746385 cdd: 10043 xref: COG0168 gene: TrkG desc: Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] num: 55 15900394 28378784 15828615 20806722 31544692 46907225 76788679 28211880 42561284 52081585 47459261 56964430 58337295 13508199 23098843 57866340 22537770 16078414 28210002 55820409 15926611 19745443 55820361 52082285 15613161 29377045 15615656 16080162 15674489 18310873 52079897 22537731 15927583 15902114 42780506 25011717 15900023 73663071 56418747 78044109 25011680 42780583 15902470 42780497 54020248 76788046 24380083 12045179 57866599 71894530 70726936 73663662 70727566 50364981 29374934 cdd: 10044 xref: COG0169 gene: AroE desc: Shikimate 5-dehydrogenase [Amino acid transport and metabolism] num: 37 56421059 15674634 24379237 28379814 55820718 28210815 28379815 76787854 70726320 78043133 25011764 46907718 20807710 15613887 19746518 81428502 42783461 28377877 23099442 16079620 18309682 29376124 15903277 15901230 56963403 46908470 57867066 22537820 15894184 19745656 73662471 15673739 15675472 46906736 28379810 52081116 15927176 cdd: 10046 xref: COG0171 gene: NadE desc: NAD synthase [Coenzyme metabolism] num: 41 15903319 15675523 55820325 15894337 57867391 28210403 29377110 16077382 12045244 20807133 15901273 73662188 15829094 22536480 81429182 78042774 23097842 28377448 58336849 13358023 15673084 76787651 19746572 42781141 56963916 25010360 26553647 15895058 56421131 47459027 46907318 42560975 54020213 42519608 18310040 24378953 52078821 70726041 15927486 50365338 15614848 cdd: 10047 xref: COG0172 gene: SerS desc: Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 48 15675591 20806566 52078504 42560626 15893315 46908933 39938569 16077081 81429415 15673694 28377821 12044855 23097467 29374751 58337885 28209854 26553858 42779094 56963193 15925714 15893319 73661318 55820422 47458927 78043693 25010417 24380240 70725009 15612587 15828505 15900330 28377392 15902416 71894601 13357663 54020355 31544926 56961795 76787984 57865923 19746699 29377733 42519649 22536539 50364832 18308996 13507744 56418548 cdd: 10048 xref: COG0173 gene: AspS desc: Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 46 42560880 47459109 26553741 81428474 54020359 15903965 20807683 15673947 78043789 76788619 28378622 52081234 15675898 15927210 15828803 57867125 22538241 31544389 46907747 28211802 15613815 16079809 13357846 19746997 18310915 42519261 12044886 20808736 70726292 55821936 29376492 24380434 56963342 13507785 58337236 39938614 42783531 15895537 15901929 56421107 23099474 24380186 71894451 50365182 73662438 25012098 cdd: 10050 xref: COG0175 gene: CysH desc: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] num: 16 42780618 23099107 29376833 52080525 15893405 44004443 15614049 50812215 70725414 57865564 73663718 16078621 15894483 52080160 56962385 56418951 cdd: 10052 xref: COG0177 gene: Nth desc: Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] num: 33 23099212 25010584 15903200 15673053 46908127 15674949 76786990 15614261 29375731 73662601 15901139 15927033 42519123 28379327 24380028 58337445 20808188 56963822 56420704 15893977 28210111 57866952 19745991 81428527 16079291 55821227 42780750 15927442 70726461 78043065 22536647 18310300 52080742 cdd: 10053 xref: COG0178 gene: UvrA desc: Excinuclease ATPase subunit [DNA replication, recombination, and repair] num: 59 76788140 18309330 57866395 25011793 15893794 13357659 71894047 29375356 20808374 15894743 73662980 15673800 24380212 29375611 23099942 15900123 19746759 46908285 12045281 31544291 15675653 81428661 57866569 26554363 15613277 56962620 70725307 58337298 70727131 54020127 78044591 55821720 81428137 42519076 15902215 28378106 23097736 42784317 15829181 42561459 47459016 15616156 73663267 28212085 46908660 22537848 16080569 56964822 73662933 28379367 42518789 58337010 28377629 56421620 50364874 13508358 52082050 15926436 39938936 cdd: 10054 xref: COG0179 gene: MhpD desc: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] num: 25 16078139 70726983 73663115 42780328 15614563 15613634 15926557 28377759 52079578 56419231 23100320 23099899 56963938 15614568 56421566 42779342 78044524 20806781 46908499 56963258 56420070 57866489 56962894 23100321 56421565 cdd: 10055 xref: COG0180 gene: TrpS desc: Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 45 42780371 15926585 54020621 58336550 15904075 15615433 47459336 15902033 76787411 12044978 71894191 18309615 46908432 52079640 50365008 42518284 42782429 70726963 15675940 24380486 78043829 15829216 15893914 13357733 39938952 56964300 15672048 28212037 57866531 16078207 22538302 19747039 28377337 23098663 29376735 55821985 20807900 56962056 15614763 73663098 13508004 81427941 29377160 56419344 25012162 cdd: 10057 xref: COG0182 gene: COG0182 desc: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] num: 7 28210656 56419484 42783145 52079905 20808019 78043183 16078419 cdd: 10060 xref: COG0185 gene: RpsS desc: Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] num: 43 15674077 12045008 57867713 13357795 42779195 15612701 47459074 16077188 52078613 54020074 58336634 50364942 18311383 56418645 19745245 24380365 20808656 13507908 71894649 81429373 55821901 42561266 70725807 15927826 15900149 15902236 28377836 78044005 56961936 76787652 31544259 15896379 23097578 73661976 22536247 29374855 39938690 15674291 25010137 26554461 46908800 15829055 42518433 cdd: 10061 xref: COG0186 gene: RpsQ desc: Ribosomal protein S17 [Translation, ribosomal structure and biogenesis] num: 43 16077193 50364947 71894644 12045013 28377841 42518438 22536252 24380360 42561261 73661981 15612706 31544264 20808651 54020079 29374860 13357800 26554456 23097583 56961941 25010142 15927821 15900154 78045119 13507913 56418650 46908795 15674072 39938695 55821896 42779200 15902242 52078618 76788390 70725812 57867708 15829049 19745250 81429368 15674296 15896374 58336639 18311378 47459079 cdd: 10062 xref: COG0187 gene: GyrB desc: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] num: 85 31544624 81428587 47459221 42519096 15925710 55821497 58336359 26554100 57866861 13507861 24379696 42518089 50812242 55820667 28378501 23099148 46906230 70725006 15902759 54020117 25011278 25010667 42560566 71894694 12044853 15672887 16077074 57865927 42779086 47458936 56963754 15902800 52080434 54020320 15829210 15893304 50365125 76786737 31544928 56420286 15672961 13358029 20806552 56961788 42561045 29376174 39938984 19745824 22537312 73661314 28376979 13507742 24379635 19745973 18311051 28211416 29374666 15900699 28209863 18308988 23097461 56418540 78043837 15612569 15926934 15894905 42782667 52078497 81427621 15900737 15674782 15828843 50364821 73662713 22536796 26553455 58337412 46907513 15674930 15614703 70726555 76787166 12045055 13357637 71894602 cdd: 10063 xref: COG0188 gene: GyrA desc: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] num: 85 15894906 15674931 12045056 29374667 71894081 54020319 42518090 42561046 28211415 52080435 24379546 15901081 25011277 56961789 78045002 19746099 28376980 71894333 81427622 18308989 18311050 55821284 15926935 13357638 56963753 50364822 15673093 26553456 54020243 70726554 58337413 15828844 23097462 56418541 76787978 13358030 19745974 55820668 15612570 13507862 42519097 15925711 57866862 42779087 46907514 13507743 31544623 15614702 25011002 23099149 46906231 20806553 42560567 15828618 12044854 73662712 70725007 52078498 24379629 56420285 57865926 15675129 28209862 15672966 15893305 28378500 47459329 16078871 73661315 15900740 58336360 47459295 81428586 42782666 22537121 29376173 16077075 26554099 31544927 15903142 22537311 50365126 39938985 76787368 15902801 cdd: 10064 xref: COG0189 gene: RimK desc: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] num: 21 56419173 23100532 15616218 13507755 42781610 28377378 23099515 56964147 23100375 15613398 15613710 12044861 15615161 23099514 13507754 12044862 28211360 23100369 44004509 52079468 56420134 cdd: 10065 xref: COG0190 gene: FolD desc: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] num: 43 55820690 15675405 42783300 81428291 19746455 70726895 78044829 24379052 15672835 26554142 28378300 16079487 22536673 18310805 73663036 15828729 20807742 15900713 13357897 47458995 31544918 15895353 50364982 42519140 29375560 12044863 76788200 15926649 42561283 46907586 28211245 58337605 56965150 42519422 15615347 15902773 52080964 13507756 71894313 56420931 23099335 57866540 25010609 cdd: 10066 xref: COG0191 gene: Fba desc: Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism] num: 39 52082246 13507764 15896205 15902574 56965641 24378620 15900513 56962632 25010200 56421921 19746813 54019983 31544865 15673891 42784510 15616348 13358161 16080765 56420421 15894114 12044873 52082523 76788266 15927699 22536312 71894369 15828581 46908727 56962208 16081018 73662068 23100460 29375743 15614877 46908369 15675705 55821871 70725911 57867608 cdd: 10067 xref: COG0192 gene: MetK desc: S-adenosylmethionine synthetase [Coenzyme metabolism] num: 45 28210081 42518599 15902715 13507799 71894620 56964642 26553547 76786895 55821181 15615862 42783960 25010904 15673884 56421384 42779472 31544668 73662285 46907895 20806993 22536995 18311159 12044897 15896110 15675292 19746332 42561027 52081541 58337882 23099769 78043882 13357974 47459144 76787752 81428082 57867271 54020517 28378057 24379957 15900656 15829173 70726140 29375375 50365056 16080107 15927364 cdd: 10069 xref: COG0194 gene: Gmk desc: Guanylate kinase [Nucleotide transport and metabolism] num: 52 76787204 81427720 70726706 20807954 26554016 18310730 15903625 24378963 73662871 50365011 15901570 58338002 15894500 13357772 42782962 57866741 28210904 56964087 52080171 25010375 46908059 12044959 18311434 31544844 15894995 15615075 47459392 39939223 29377582 29377082 78044025 28378312 23098957 15893590 42519415 56419702 50812226 55821417 28377706 42519729 15829158 15675507 22536496 81428300 15673881 13507985 54020104 15926792 42560768 58337598 19746556 71894147 cdd: 10070 xref: COG0195 gene: NusA desc: Transcription elongation factor [Transcription] num: 44 15902522 23099050 47458985 15926849 15675574 57866748 56963996 42519362 55820434 12044993 24378911 15614979 76788260 22536561 73662811 26553563 15895075 20807843 19746626 28210959 13507893 39938634 42560896 78042921 50365108 54020616 81428862 42782904 31544317 15900465 46907548 28378676 25010487 52080267 58337537 56419795 29375840 15672746 18310671 70726649 13357878 71894695 15828674 16078723 cdd: 10071 xref: COG0196 gene: RibF desc: FAD synthase [Coenzyme metabolism] num: 48 15895082 52080274 46906978 16078730 70726642 47459303 18310664 13357915 42519356 23100326 42560884 15675210 15829019 13507897 81428852 42560665 29375863 20807836 56419802 57866762 25011086 42781216 31544324 15903061 71894574 26554380 78044293 50365099 12044997 28210965 24379574 19746179 58337531 28378664 23099057 56963989 15614972 15900977 55821029 73662802 22537157 42782897 76787231 54020335 50365150 15673109 46907555 15926855 cdd: 10072 xref: COG0197 gene: RplP desc: Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] num: 9 15829051 54020077 13357798 47459077 26554459 13507911 31544262 71894646 12045011 cdd: 10073 xref: COG0198 gene: RplX desc: Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] num: 44 15927819 15900156 76788646 71894642 26554454 73661983 56418652 78043712 18311376 19745252 56961943 29374862 24380358 54020081 28212167 42561259 46908793 28377843 15612708 22536254 39938697 50364949 15896372 31544266 15674070 25010144 57867698 58336641 55821894 20808649 15674298 81429366 47459081 70725814 52078620 13357802 13507915 42518440 15902244 15829047 16077195 42779202 12045015 23097585 cdd: 10074 xref: COG0199 gene: RpsN desc: Ribosomal protein S14 [Translation, ribosomal structure and biogenesis] num: 49 81427881 15612710 26554452 29377650 23097587 52080609 73661985 18311374 25010146 29375197 13357804 15675690 28377845 12045017 15674068 56418654 52079364 15896370 50364951 70725816 56961945 47459083 71894640 13507917 31544268 16077197 42518252 22537893 15672870 76787920 42779204 15674300 24380356 15829045 55821892 42518442 52078622 54020083 29374864 22536256 46908791 78043583 19746798 20808647 19745254 76787570 57867696 25011837 15927817 cdd: 10075 xref: COG0200 gene: RplO desc: Ribosomal protein L15 [Translation, ribosomal structure and biogenesis] num: 38 70725822 42561252 57867690 15902252 13507922 73661991 15829040 55821886 23097593 15612716 58336648 50364956 13357809 56961951 42779210 31544273 19745260 25010152 54020088 15674306 26554447 29374870 24380350 15900165 15674061 22536262 81429359 47459088 15927811 71894635 42518448 12045022 20808642 56418660 52078628 18311368 39938705 76787679 cdd: 10076 xref: COG0201 gene: SecY desc: Preprotein translocase subunit SecY [Intracellular trafficking and secretion] num: 52 57865709 29374871 24380349 56961952 70725823 22537598 22536263 16077204 78044314 39938706 42518478 76787809 15928239 13507923 15674060 42779211 28377852 54020089 50364957 19745261 81429358 28212160 25011564 15900166 42781823 15896363 26554446 15612717 12045023 25010153 13357810 46908784 20808641 57867681 71894591 18311367 15829039 15902253 15927810 70725328 15674307 76788006 55821885 56418661 42518449 47459089 73661992 58336649 15901594 23097594 31544274 52078629 cdd: 10077 xref: COG0202 gene: RpoA desc: DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] num: 44 50364965 15829032 15674313 26554440 42518455 39938713 42779218 18311358 57867752 56961959 58336655 13507930 46908778 29374877 19745267 15900172 15896355 73661998 76787566 55821879 22536269 52078637 25010159 54020095 81429352 28377858 13357817 16077211 70725829 56418668 47459096 42561246 31544832 15902259 23097600 24380343 15612725 15674050 71894584 12045030 15927804 28212154 78044042 20808632 cdd: 10078 xref: COG0203 gene: RplQ desc: Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] num: 43 15927803 58336656 15900173 28377859 22536270 15674049 55821878 42561245 24380342 54020096 47459097 15902260 56961960 25010160 70725830 57867751 13357818 76788670 19745268 15896354 71894583 42518456 39938714 42779219 16077212 29374878 26554439 20808631 50364966 15829031 15675947 13507931 15612726 31544831 52078638 46908777 81429351 18311357 78044459 28212153 73661999 56418669 23097601 cdd: 10079 xref: COG0204 gene: PlsC desc: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] num: 51 15927304 12045066 42519374 78043079 56963638 46907876 15894252 15828585 13357904 42518149 22536944 39938781 31544608 58336421 28210110 18310400 15903508 52079434 70726198 71894121 20808574 15614198 28210290 58337549 76786840 42779311 18310301 47459313 24379097 15901460 50365200 15893976 81428879 57867253 28378691 23099256 55821539 15672094 15675330 26553489 42781334 73662345 20807798 16078019 42561107 19746372 23098324 13508038 29377171 25010855 56420761 cdd: 10080 xref: COG0205 gene: PfkA desc: 6-phosphofructokinase [Carbohydrate transport and metabolism] num: 8 13357743 15829072 13508041 78043322 12045069 56965264 18310167 18310449 cdd: 10081 xref: COG0206 gene: FtsZ desc: Cell division GTPase [Cell division and chromosome partitioning] num: 42 46908268 55820801 31544602 19746470 76786789 18310747 54020187 50365210 23098928 15615121 73662894 58337121 12045079 16078593 26554291 15675420 15901501 42782999 28378797 78043427 52080131 29375579 70726730 28894894 15903553 42518900 25010595 15894970 56964118 15926769 57866693 56419660 81428365 13508056 20808066 42561118 71894355 28210819 22536658 24379033 15673851 15828962 cdd: 10083 xref: COG0208 gene: NrdF desc: Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism] num: 46 13508061 15896521 28377561 16078802 25010526 46908387 50365347 19745563 22536601 19746348 56964873 15903110 52080345 23100542 12045084 15672956 22536982 15901045 29375101 18311342 73663294 50812253 42561374 31544249 15829010 57867410 56419447 71894414 55821276 15675308 70727160 26553540 42780545 24379140 76788476 54020059 39938541 57866341 81428551 58338007 25010891 15613065 56421306 15926409 15674552 76788606 cdd: 10084 xref: COG0209 gene: NrdA desc: Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism] num: 52 15894334 24379141 20808702 50365345 18311343 76787476 25010528 70727161 42561372 56420954 16078801 78044854 55821275 57867420 56419446 13508063 15615373 71894416 58336392 50812254 12045086 26553538 29375102 56964872 22536983 39938540 25010892 42780544 28377562 15901044 19745565 47458851 73663295 15672957 22536603 52080344 15675307 54020061 19746347 81428552 15674554 76788702 15829012 28210310 15613064 15903109 31544247 15926408 57866331 46908388 15896522 23100544 cdd: 10085 xref: COG0210 gene: UvrD desc: Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] num: 60 26554344 16077729 70726047 42519596 25011383 42561294 42779415 15895932 76787976 57867385 31544584 15615397 56418810 28210415 39939107 18311242 16078247 47459326 15900955 15675225 12045098 15673102 73662195 42780420 15894290 22537300 23098214 58336855 42518981 15894426 20807099 15829239 15829169 39938899 56962858 18309405 55821019 52079686 47459324 13358064 81429165 28377922 15613211 52079148 50365383 54020194 13508080 28210690 28211985 71894555 15927479 18310188 25011258 78045143 24379604 19746195 29375317 46907989 15903039 56964274 cdd: 10088 xref: COG0213 gene: DeoA desc: Thymidine phosphorylase [Nucleotide transport and metabolism] num: 35 12044901 56963549 29374823 15927710 50812307 15829117 70725899 15614096 31544788 78043823 50364934 46908220 20806972 81428414 24379556 28211618 15894824 71894459 15902788 47459371 57867628 15900729 56420847 42783200 13507803 18310789 23099299 26553559 42781046 42561352 73662057 15673424 54020133 52082508 13357928 cdd: 10089 xref: COG0214 gene: SNZ1 desc: Pyridoxine biosynthesis enzyme [Coenzyme metabolism] num: 17 42779092 56962231 70727489 23100142 56418546 52078502 57866089 15903365 46908336 15926196 78044425 20807305 16077079 73663546 15893883 15612585 15901318 cdd: 10090 xref: COG0215 gene: CysS desc: Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 44 15675744 42779170 52078589 76787565 28212192 70727478 25010277 19746854 54020642 39938627 47458983 24378673 57866107 13508095 81429293 18311409 15828648 15902563 13357680 15900500 71894372 29374703 55820186 42518493 15673833 15896425 28377486 46906472 73663535 31544883 22536391 12045107 26553474 20808681 50364902 56961911 42561475 78044929 15612674 16077162 58336686 56418620 15926207 23097554 cdd: 10091 xref: COG0216 gene: PrfA desc: Protein chain release factor A [Translation, ribosomal structure and biogenesis] num: 44 13357561 22537235 15902968 57867593 20806672 76788237 42560702 28210063 55820816 15927692 56965632 15675118 15828576 31544341 19746088 56421913 18311184 16080754 39938500 25011160 70725918 81428746 52082235 54020410 15672577 50365449 13508100 47459025 23100453 28378950 24379522 15616337 58337080 26553517 78044074 46908715 42784501 15896138 15900891 42518855 12045113 29377042 71894205 73662075 cdd: 10093 xref: COG0218 gene: COG0218 desc: Predicted GTPase [General function prediction only] num: 43 18310371 56421184 46907788 28378737 39938503 71894660 24379393 15895894 70726255 15673134 26553493 55820661 13508220 13357826 15927252 15615611 23099530 20807122 81428670 15674911 47459175 50365173 15903469 12045192 22537458 52081302 56964398 42560838 42783606 16079871 42518938 58337155 15901411 25011424 28211962 19745954 31544773 57867148 15828710 76787685 29376444 54020515 73662400 cdd: 10094 xref: COG0219 gene: CspR desc: Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis] num: 43 15674520 18310293 12045205 31544522 56963235 42779682 78044914 24380081 22537728 70726108 15927429 15828774 19745529 28378810 15673131 15893988 20806774 71894579 28210123 15613586 50365192 13357828 13508260 73662249 16077958 56419019 81428093 76786761 29377148 58336980 46907168 23098542 42518756 47458956 54020406 42561144 15900400 15902476 57867280 26553462 55820364 25011677 52079368 cdd: 10095 xref: COG0220 gene: COG0220 desc: Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] num: 41 15672731 56964542 25010485 15675576 42783887 18309406 29375288 73662324 81428247 28378177 19746628 15900463 22536559 15673708 71894137 50365034 31544521 15615823 13357829 23099749 56421358 24378909 70726175 55821582 54020523 46907846 16080042 57867181 15902520 15828637 15927325 15895885 42779380 52081490 58337845 42560718 47459331 76788052 26553742 42519544 28210511 cdd: 10096 xref: COG0221 gene: Ppa desc: Inorganic pyrophosphatase [Energy production and conversion] num: 15 50365361 56420781 13508267 39938631 12045211 71894171 13357875 15004799 31544479 54020268 26553892 15614167 42560943 15828941 47459356 cdd: 10097 xref: COG0222 gene: RplL desc: Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] num: 42 15673250 26554025 15903254 18311396 15675065 22537448 76787462 15612685 78044942 28377498 81429278 16077173 23097565 71894436 42561521 57866132 24379403 55820617 42518511 42779181 58336708 15926218 12045222 13357567 20808669 73663524 50365418 31544351 52078599 15828760 13508278 15896393 70727466 39938745 29377194 46906484 15901208 56961922 56418631 47459369 25011416 54020630 cdd: 10098 xref: COG0223 gene: Fmt desc: Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] num: 43 58337595 56964083 28378316 73662865 56419707 20807949 23098961 70726700 19746553 15828516 76788249 42782958 15901567 18310725 42519412 24378966 71894535 55821414 15903622 13358026 28210908 56421660 78043011 16078636 15615071 29377579 15675504 52080176 13508282 22536499 15673875 12045226 57866754 46908055 15895000 25010378 42560985 26553502 81428304 50365227 15926799 31544333 47459240 cdd: 10099 xref: COG0224 gene: AtpG desc: F0F1-type ATP synthase, gamma subunit [Energy production and conversion] num: 29 26553513 19745846 15674807 15896120 71894421 13508338 71894480 58337089 12045262 18311170 57867650 15927678 15828738 20807129 15673747 55820566 15901356 24379918 47459135 25010935 46906330 22537025 13357687 76788294 47459044 15903404 15828917 42518864 70725932 cdd: 10101 xref: COG0226 gene: PstS desc: ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] num: 52 46908671 25011991 56420998 29376308 50365049 12045274 42783398 22537152 57866941 13508350 26554386 15894982 15926969 31544243 16079554 15673702 47458843 42561020 42779861 15673703 55821034 78043105 15903300 29376257 22538102 70726523 42518714 52081035 28377594 15901900 23100591 24379569 18309618 73662670 25011081 81429389 18309619 76788423 56421971 15903936 58336699 15675205 56964356 76787686 15901254 28210826 13357756 19746174 20808058 28377605 15615556 81428115 cdd: 10102 xref: COG0227 gene: RpmB desc: Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] num: 43 57866770 15902442 24378640 13357768 15829167 19746812 15900358 39938592 23098969 54020115 16078645 46908048 42561018 15615063 47459250 26553855 42782950 29377572 18310716 15672174 52080185 55821925 13508363 31544734 76788045 71894090 70726692 58337587 78044163 15926807 56419716 15895010 22536314 50365043 25010202 42519405 15675704 81428311 73662857 28378323 20807938 56964076 12045286 cdd: 10105 xref: COG0230 gene: RpmH desc: Ribosomal protein L34 [Translation, ribosomal structure and biogenesis] num: 9 31544211 39938733 50365498 15828625 13358169 13508421 42561576 26554489 12045325 cdd: 10107 xref: COG0232 gene: Dgt desc: dGTP triphosphohydrolase [Nucleotide transport and metabolism] num: 6 18310991 28211635 78045165 20808176 46908835 29376481 cdd: 10109 xref: COG0234 gene: GroS desc: Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones] num: 21 19746947 15901733 52079059 23098110 28377590 15903765 12045255 15675833 26553551 29377119 24380301 81427972 25012068 39938606 50812190 76788010 22538210 42779369 55820301 13508313 31544682 cdd: 10110 xref: COG0235 gene: AraD desc: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] num: 38 23100709 15903886 56962186 15674384 18309301 26554172 78043941 42783152 52079910 56419490 22537949 81429468 78044535 56965834 16078425 28379910 54020507 25011890 52081380 13508237 23100253 15904013 71894056 16079930 15829070 15901976 19745344 42780519 28379865 28210655 46908329 42779525 15901854 76788060 56420441 15894620 20808021 24378781 cdd: 10111 xref: COG0236 gene: AcpP desc: Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] num: 68 12045143 70726683 42519400 29377567 15614409 22537927 46908038 28378362 22536832 15895024 56964065 18677776 15614404 15896811 25010097 56420009 20807918 47459055 15926523 56419726 57866463 76788159 19746291 16080903 15674267 15904021 81428427 73662846 28378652 15896556 76787600 28378328 22536208 29377222 23098980 81428316 18310701 24380065 15615053 15895466 15673241 29377350 76786855 70727020 81428011 16078655 58337582 52080195 15926815 73663150 28378136 15828829 67078297 52082369 25011870 15675259 42782942 25010703 15901984 39939225 24378555 78042800 55820827 55820132 15895287 57866683 42780559 19745218 cdd: 10112 xref: COG0237 gene: CoaE desc: Dephospho-CoA kinase [Coenzyme metabolism] num: 29 54020476 18310344 22537631 56421262 13508121 18310975 58337811 25011595 24379993 15902917 50365097 23099616 55820700 31544439 76787787 15927266 19745617 28378224 15615712 15894384 15829192 15900848 81429014 47459412 12045120 57867409 26553654 15672647 15674604 cdd: 10114 xref: COG0239 gene: CrcB desc: Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning] num: 37 46908317 58337288 81427745 15927358 58337289 78043309 28377146 73662288 46908318 42784263 15615549 42518822 70726143 42518821 15894865 56962638 70726144 15903215 52079445 28563944 57867236 56421237 23100173 57867235 15894864 15901155 52079444 15615548 15901154 15903216 18310011 73662289 15927357 56962639 42784262 56421238 78045202 cdd: 10115 xref: COG0240 gene: GpsA desc: Glycerol-3-phosphate dehydrogenase [Energy production and conversion] num: 41 71894664 16079340 15927055 15673320 52080792 15903943 28210832 24378822 42780706 19745366 81428131 46908169 28377615 78043111 56420755 42560948 25010515 50365016 15614203 13357943 15828595 39938727 23099251 20808044 22536590 15674414 18310736 58337000 29376296 15901906 26553683 47459317 57866987 76787440 73662581 70726438 42518776 56963643 15894989 55821804 31544487 cdd: 10116 xref: COG0241 gene: HisB desc: Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] num: 4 23098730 56963718 15896304 42781320 cdd: 10118 xref: COG0243 gene: BisC desc: Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion] num: 15 78044346 56422019 16081145 78045207 18310530 78044357 52082205 16078918 78043983 15615416 78044729 78042637 78044113 52080544 15615093 cdd: 10119 xref: COG0244 gene: RplJ desc: Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] num: 44 52078598 15675064 26554026 23097564 15673251 25011417 18311397 20808670 56418630 70727467 15926217 58336707 46906483 15612684 54020631 56961921 15896394 31544350 47459368 55820616 71894435 78042885 13508277 13357566 73663525 42779180 81429279 12045221 42518510 76788028 15828761 28377497 28212182 15901209 16077172 24379400 19746042 42561520 39938744 50365419 29377195 15903255 57866131 22537449 cdd: 10122 xref: COG0247 gene: GlpC desc: Fe-S oxidoreductase [Energy production and conversion] num: 38 15614698 78044369 56420066 16079921 23100287 56420548 78044931 78042869 78044753 23097825 29375684 56421933 52081971 56965794 16080458 42780483 52078782 52082255 16080771 15614395 78044475 42784521 15615292 78044496 56965011 23100469 56965650 78043677 78043102 56962749 18309562 56963941 56418930 78044464 78042735 42780490 15616364 15673715 cdd: 10123 xref: COG0248 gene: GppA desc: Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] num: 12 28377348 28377687 42783091 73661743 15893909 15613956 18310644 20808800 70725589 57865440 78043933 28377685 cdd: 10124 xref: COG0249 gene: MutS desc: Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] num: 40 55820153 16078767 52080310 42782853 73662140 15895112 25012092 56419841 81427976 70726618 19746989 15675890 42518561 15674192 28210987 15896798 18309290 73662774 28209998 23099086 20808311 28378884 46907631 57866808 18310137 76786970 78043130 15614932 15926878 56963952 57867552 24380425 15896285 15903929 22538235 20807804 15927623 29377617 58336745 70725198 cdd: 10125 xref: COG0250 gene: NusG desc: Transcription antiterminator [Transcription] num: 44 15903862 57866121 70727472 78043442 20807217 25012055 19745330 22538197 20808673 71894376 13358146 54020638 23097561 16077169 28377493 15926213 12044904 46906479 15674369 13507806 50364906 15896397 15674086 73663528 42561478 47458980 18311400 15612681 56961918 15901830 76786867 55820313 24380295 20808504 15828653 81429286 42779177 42518504 29377206 58336696 39938741 52078595 28212185 56418627 cdd: 10126 xref: COG0251 gene: TdcF desc: Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis] num: 19 42561318 15615647 52081135 52081133 15674355 15894362 42781219 42781783 19746941 57866041 15675828 56963156 56962629 81428057 55820873 42561330 78045174 15926174 19745315 cdd: 10128 xref: COG0253 gene: DapF desc: Diaminopimelate epimerase [Amino acid transport and metabolism] num: 19 28211908 15895882 28378791 29375095 56421492 18310828 46908247 58337156 20807956 57865749 15928049 52081707 23099809 15614634 16080270 15615974 78044318 56964698 42784120 cdd: 10129 xref: COG0254 gene: RpmE desc: Ribosomal protein L31 [Translation, ribosomal structure and biogenesis] num: 41 47458963 31544340 20806668 29375747 42560698 50365453 73662073 56965636 16080122 71894489 15903220 23100455 15674775 22536714 81429239 42784503 70725916 58336604 55820810 78044735 42518355 54020206 24379714 26553516 28377400 13357560 46908720 15828611 15896142 18311187 76786901 19745816 15673578 15901159 15927694 56421916 52081559 15616342 57867595 39938591 25010650 cdd: 10131 xref: COG0256 gene: RplR desc: Ribosomal protein L18 [Translation, ribosomal structure and biogenesis] num: 43 55821889 57867693 58336645 29374867 46908788 22536259 47459086 15900162 52078625 76787371 24380353 73661988 25010149 19745257 15612713 71894637 20808644 15829042 18311371 42779207 15896367 70725819 23097590 78044632 13357807 15674064 54020086 15674303 56418657 42518445 56961948 28212163 15927814 50364954 12045020 15902249 26554449 81429362 28377848 13507920 16077200 39938702 42561254 cdd: 10132 xref: COG0257 gene: RpmJ desc: Ribosomal protein L36 [Translation, ribosomal structure and biogenesis] num: 16 47459093 22536266 25010156 24380346 81429355 19745264 39938710 29374874 15674310 15902256 28377855 55821882 42518452 15900169 15674053 58336652 cdd: 10137 xref: COG0262 gene: FolA desc: Dihydrofolate reductase [Coenzyme metabolism] num: 16 81429276 28379302 23097829 46908744 73662644 15673942 23097830 12045067 70725161 16081128 29374933 16080775 73661428 15894774 23098182 42779795 cdd: 10138 xref: COG0263 gene: ProB desc: Glutamate 5-kinase [Amino acid transport and metabolism] num: 27 15902876 15614068 15673591 28376988 46907486 16078377 24378938 15896498 52079810 28210746 19746586 52080521 25010347 22536467 18311561 76788341 15900811 42782085 23098507 20807726 78043896 29374696 56963532 15675535 55821683 56420583 16078908 cdd: 10140 xref: COG0265 gene: DegQ desc: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] num: 58 20809027 28377009 81427695 39938513 28210567 15674118 28209960 52081786 15893754 52079788 57866598 15895698 20808917 15927305 56965851 16081088 19747045 56963867 76788422 46906533 25012168 55821991 42518156 42782669 15926610 15893791 78044578 15614752 23098038 56418867 52082608 78042662 15616584 16078355 15902042 58336431 16080575 15904086 18311468 15896465 70726937 22538308 78044916 24380491 56422004 50812291 23098555 54020251 15616160 73662344 23100902 73663072 15675945 57867254 29377486 70726197 18311212 42784655 cdd: 10141 xref: COG0266 gene: Nei desc: Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair] num: 41 78044278 15672335 46907795 52081409 56421263 13508119 54020255 28378223 42783763 81429015 15900847 15674603 15902916 24379994 23099617 19745616 15927267 47459207 31544438 55820699 73662385 25011596 15828781 71894461 29375464 22537632 57867171 56964473 58337812 26553653 50365398 76788529 70726236 12045118 16079960 13357975 15615714 56962663 39939160 42561208 42519527 cdd: 10142 xref: COG0267 gene: RpmG desc: Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] num: 73 56420985 70726573 15896399 29377651 13508210 73663530 42779175 71894148 29375200 28377491 58337773 78044352 15900850 22538200 15612679 15901949 16077167 70726366 18677781 42783470 13507808 55820702 15901832 39938739 55820311 46906477 23099380 24379990 42518502 31544650 19747001 15926916 57867076 81429288 12044906 29377324 46907561 15828651 18656942 29377208 56963486 56961916 20808675 57867842 15903864 76786822 13358097 26553841 23097559 81428944 52081026 42519495 15902920 55821942 22538244 15903985 15672075 42783392 12045183 15927131 57866825 39938730 47459384 52080916 25012101 15675901 18311402 15828960 73662514 73662731 50364904 15674088 56418625 cdd: 10143 xref: COG0268 gene: RpsT desc: Ribosomal protein S20 [Translation, ribosomal structure and biogenesis] num: 43 47459355 31544331 26553500 55820850 46907708 23099431 28378746 25010992 24379559 52081104 42783449 73662481 12045224 54020357 15613902 76786928 13508280 78044397 81428677 18311024 56963416 70726332 39938567 15927166 50365186 58337148 42560645 56421047 15829127 19746165 13357870 15894556 15900725 15675196 29376937 42518931 20807424 71894095 57867048 15902784 16079609 15673721 22537111 cdd: 10144 xref: COG0269 gene: SgbH desc: 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism] num: 26 73662928 19745342 15674382 26554174 24378779 70727419 57866142 54020509 23100261 52081157 73662935 71894054 15926248 29375705 76788309 13508232 56965113 15893687 15829068 15903888 23100152 25011892 22537951 73663457 15901856 16077415 cdd: 10145 xref: COG0270 gene: Dcm desc: Site-specific DNA methylase [DNA replication, recombination, and repair] num: 5 16077673 15828657 15894505 42783651 23097628 cdd: 10147 xref: COG0272 gene: Lig desc: NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] num: 46 16077730 15828860 56418811 76787534 70726048 20807100 58336856 28211984 23098215 31544904 55821530 15894478 15895931 29375318 25010923 46907988 56962859 13508096 19745839 39938924 57867376 15672401 73662196 15903068 15828872 15900984 22537014 28377923 13357678 47459030 71894578 15613212 54020343 52079149 26553637 12045108 42519595 42561289 24379931 15674800 81429164 42779416 15927478 18311241 78043193 50364975 cdd: 10148 xref: COG0274 gene: DeoC desc: Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] num: 36 71894458 73662056 81428408 13507802 25012062 52081090 15613915 52082510 15894823 28211619 22538205 13358150 78044909 24379555 57867629 20807455 15927711 46908222 15925842 70725898 23099418 18311034 15673422 15900730 55820857 15828785 16080993 12044900 15902789 56963431 76787304 56421034 29374824 15675686 19746794 42781044 cdd: 10151 xref: COG0277 gene: GlcD desc: FAD/FMN-containing dehydrogenases [Energy production and conversion] num: 36 56420065 18309388 56965012 28210683 18309295 42780484 15895804 15614699 42779559 52078783 78042869 78042639 20806747 23098812 23100286 50812216 56420549 23099166 78043260 56962995 16079920 42782581 78044475 15614697 16080505 56965795 78044838 56420067 56963942 16077945 28377214 23098714 56963940 15615293 42779280 56421750 cdd: 10154 xref: COG0280 gene: Pta desc: Phosphotransacetylase [Energy production and conversion] num: 31 29376217 15926266 70727403 55821439 24379481 15675108 71894663 56420917 56421950 19746077 46907595 42518809 28377658 29375533 57866177 81428954 22537250 15903051 25011210 15900968 46908338 47459003 54020554 15828708 15673641 76787123 26553955 15616385 13357622 73663433 56965668 cdd: 10155 xref: COG0281 gene: SfcA desc: Malic enzyme [Energy production and conversion] num: 46 28212047 58337366 18310133 39939207 42780942 15673168 56419975 28210112 23099631 81428055 16080758 15672882 52082423 78045180 16079412 20808698 29377757 57867207 52081488 76788360 52082239 56964488 29375780 16079974 15894867 23100673 15675092 22538057 42783780 19746060 15927279 15612962 56420069 15615730 46908148 56962692 25011945 28377893 52081423 42779720 15894874 70726224 16080040 73662374 28377905 24378655 cdd: 10156 xref: COG0282 gene: ackA desc: Acetate kinase [Energy production and conversion] num: 54 18309199 46907812 31544691 19745288 39938645 42783819 28377232 13508272 15828709 71894662 24380322 23099646 25010242 18310706 57867223 15895020 15901865 15673995 42518837 58336796 58337758 81429280 28377144 76787553 52081438 81428909 15674332 16079999 73662363 54020553 28210927 15615754 42560818 26554022 81427808 58337055 47459004 13358047 15673994 29376505 22536352 70726215 15927288 46907386 55821829 15903896 78042887 56421320 42518581 28378840 56964505 50364859 58338119 20807925 cdd: 10157 xref: COG0283 gene: Cmk desc: Cytidylate kinase [Nucleotide transport and metabolism] num: 44 20807797 16079346 42560946 76788155 73662578 26553681 57867004 15895123 56963637 55821146 15901443 15903499 12045188 50365014 42519015 13508215 29376110 15614197 15828560 54020023 23099257 24379167 15674845 15927059 19745884 39938725 47459319 58337264 81428629 46908172 28378536 78043493 70726435 28210998 52080800 71894166 42780697 13357902 25011497 15673685 56420762 31544363 22537532 18310066 cdd: 10158 xref: COG0284 gene: PyrF desc: Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism] num: 32 70726711 56419690 24379646 15900600 25011133 55821002 29376265 16078619 28379198 52080157 42782976 23098949 76787728 28211973 26554240 42519207 15615096 56964095 19745965 15673327 57866727 46908064 73662877 15926787 15902657 15895910 22537206 15674922 58337657 81428569 78045030 18310162 cdd: 10159 xref: COG0285 gene: FolC desc: Folylpolyglutamate synthase [Coenzyme metabolism] num: 44 15895664 42518884 19746047 57867132 15675079 22537275 55820497 70726265 58337106 15900133 23097656 56421172 24379409 18310900 23099513 29377392 81428460 50364875 39938493 19745894 28379660 78044302 52081290 42783594 81428709 15615599 15902222 15673139 24379294 76786740 15900224 56964385 15674855 25011235 55821522 16079860 20807265 28378903 15902311 46907781 42561458 28211898 15927241 73662411 cdd: 10160 xref: COG0286 gene: HsdM desc: Type I restriction-modification system methyltransferase subunit [Defense mechanisms] num: 43 57865903 13508081 52079176 15926109 58336670 56418878 31544886 15674741 54020633 15896771 26554276 28211851 78044904 15927382 42779917 22537429 47459119 56419915 15829149 18311571 15900423 15902493 15675719 15675377 28377765 20807981 52082597 19746827 19745472 15902834 55820777 47459121 13357655 76787763 24379344 19746674 15900769 73661362 15672633 15828553 70725065 15828904 19746252 cdd: 10161 xref: COG0287 gene: TyrA desc: Prephenate dehydrogenase [Amino acid transport and metabolism] num: 8 57866879 15903274 73662696 15901227 15614229 15926945 15894180 46908157 cdd: 10163 xref: COG0289 gene: DapB desc: Dihydrodipicolinate reductase [Amino acid transport and metabolism] num: 25 15901398 15614243 20807313 15926976 46908140 56420720 52080757 73662663 15895645 15903457 70726516 16079306 23099223 58337162 78044285 56963681 24379352 18310888 55820511 28211892 57866852 28378529 29376120 15673543 42780735 cdd: 10164 xref: COG0290 gene: InfC desc: Translation initiation factor 3 (IF-3) [Translation, ribosomal structure and biogenesis] num: 44 78042833 25011496 15674846 70726246 23099607 15927259 28378229 81429008 47459464 16079939 42519518 26554368 54020112 13507854 57867163 29375498 71894616 12045048 15895628 22537531 50365004 56421253 13357787 18310876 15828730 42783752 58337803 52081389 15902905 42560771 76788706 56964454 20808119 15673826 73662393 24379168 39939230 31544561 55821145 15615702 46908015 15900836 19745885 28211883 cdd: 10165 xref: COG0291 gene: RpmI desc: Ribosomal protein L35 [Translation, ribosomal structure and biogenesis] num: 39 42519517 13357788 13507855 22537530 15674847 42560772 12045049 31544562 76787843 15615701 23099606 73662394 56964453 71894617 81429007 56421252 19745886 42783751 28378230 70726247 50365005 25011495 15927258 15895627 15902906 47459463 52081388 58337802 15900837 54020113 46908014 57867162 24379169 15673825 55821144 20808118 78044360 16079938 18310875 cdd: 10169 xref: COG0295 gene: Cdd desc: Cytidine deaminase [Nucleotide transport and metabolism] num: 48 56421024 13507804 50364958 25010995 12044902 22537114 18310998 15613929 15673421 24379554 50365283 42781941 76788280 15902790 52080623 15903231 15901887 52081077 15903921 19746162 20806970 42781047 70726349 42783427 71894403 78043042 29374825 28211642 16079584 47459182 73662497 46907691 15895867 15675193 13358095 15828850 15900731 31544787 56962255 26553560 57867010 23099206 56963445 15894822 55821334 55820858 54020100 15927148 cdd: 10170 xref: COG0296 gene: GlgB desc: 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] num: 15 58337002 47459236 25010926 18309045 15903073 16080150 42784074 28376992 52081576 22537017 76787065 15900988 18310570 24379928 23097861 cdd: 10171 xref: COG0297 gene: GlgA desc: Glycogen synthase [Carbohydrate transport and metabolism] num: 17 15672681 15903076 28376995 24379925 15613648 16080147 22537019 76787437 15895507 42784071 52081573 18309046 23097864 47459237 15900991 58337005 25010929 cdd: 10174 xref: COG0300 gene: DltE desc: Short-chain dehydrogenases of various substrate specificities [General function prediction only] num: 44 28212114 46908203 18311563 42518999 19745987 73662560 81428653 58337248 15902636 22537367 15927083 50812310 26554435 25011330 15900576 56420006 18309346 15673291 24379868 16080820 16079435 24380447 29376244 52080910 28378713 55821232 23100276 56965021 76787771 15896244 15674945 15672613 56420864 15614069 15004755 52081343 50364988 42779998 15004706 23099309 28377279 70726415 42783251 57866976 cdd: 10175 xref: COG0301 gene: ThiI desc: Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] num: 41 24379297 12045233 76787749 20808089 71894517 15615765 13508289 15927292 13357980 70726211 31544704 57867227 42560828 50365401 39938629 25011484 73662357 58337101 47458906 81428457 16080010 52081451 42783830 15896224 46907823 26554038 23099653 15829189 42518879 19745897 15900764 18310394 22537519 28378907 56421330 29377398 56964514 55820500 15674858 15902828 15672361 cdd: 10176 xref: COG0302 gene: FolE desc: GTP cyclohydrolase I [Coenzyme metabolism] num: 22 20808735 16079335 46908166 25011234 29377710 18310001 15673136 55821520 19746048 78045076 15675080 28379661 56420749 22537274 42780712 15614209 56963648 81428710 24379410 15896860 52080787 76788132 cdd: 10177 xref: COG0303 gene: MoeA desc: Molybdopterin biosynthesis enzyme [Coenzyme metabolism] num: 21 15615583 46907274 52080027 78044523 56419307 78045151 42782631 18310775 42783910 56962669 16078492 15895291 57867769 15927853 73661949 29375958 70725780 15895290 78043077 28378210 78044011 cdd: 10179 xref: COG0305 gene: DnaB desc: Replicative DNA helicase [DNA replication, recombination, and repair] num: 50 19745465 19747016 70725016 23100915 24380468 78043236 25012133 20809103 13358114 57865906 50364899 16081096 29374673 13507971 15675917 71894440 39938499 76788678 58336366 15616591 28376986 42518097 15828986 42780104 57867494 15672728 15894475 52082618 42784663 56422011 54020645 73661325 12044946 46906285 39938914 47459006 15902010 15925721 26553658 15904049 18311616 81427628 42561472 22538273 55821966 15896946 28209885 22538011 56965858 16079096 cdd: 10180 xref: COG0306 gene: PitA desc: Phosphate/sulphate permeases [Inorganic ion transport and metabolism] num: 21 15926341 46908482 44004507 15896344 52080524 29376936 70727229 46906643 57866233 18309565 73663368 20806846 56962387 42780650 56421480 15614051 52080161 16078349 78043033 52079760 16078622 cdd: 10181 xref: COG0307 gene: RibC desc: Riboflavin synthase alpha chain [Coenzyme metabolism] num: 21 23100670 25010823 15893880 16079384 15902207 56420831 73662305 15900114 76787096 15614118 42783226 18309549 78043525 57867217 15927344 52080842 70726155 15672976 28210396 22536911 56963576 cdd: 10182 xref: COG0308 gene: PepN desc: Aminopeptidase N [Amino acid transport and metabolism] num: 15 20809038 25011075 15902750 81427839 15675199 55821040 22537146 42519458 28377763 58338097 24379563 19746168 15900690 15672287 76788425 cdd: 10183 xref: COG0309 gene: HypE desc: Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] num: 4 20806663 78044855 20807973 15894096 cdd: 10184 xref: COG0310 gene: CbiM desc: ABC-type Co2+ transport system, permease component [Inorganic ion transport and metabolism] num: 11 18309174 28210444 15894058 78043906 15894644 81428396 46907423 28377055 55820383 20806770 20808121 cdd: 10185 xref: COG0311 gene: PDX2 desc: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] num: 18 16077080 56418547 15926197 52078503 57866090 46908337 24379687 78042673 73663545 15901317 56962232 42779093 70727488 15903364 23100141 15893884 15612586 20807304 cdd: 10186 xref: COG0312 gene: TldD desc: Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only] num: 14 78043221 15893522 39938933 18309322 20809065 15614600 15893521 20807611 15614599 15895105 78043700 20809066 18309321 15895104 cdd: 10187 xref: COG0313 gene: COG0313 desc: Predicted methyltransferases [General function prediction only] num: 44 47459360 81427958 13357753 30023988 58336722 12044908 15674543 46906403 42561097 54020348 29377233 42518526 23097499 71894074 22537713 15926166 39938718 31544731 15828525 20806633 56961839 19745554 28209993 15893599 42779115 70727521 56418564 57866026 73663576 28377574 24380037 52078531 55820576 76787523 15902882 78043091 25011663 18309262 15900818 16077104 50364918 26553593 15612612 13507810 cdd: 10190 xref: COG0316 gene: IscA desc: Uncharacterized conserved protein [Function unknown] num: 10 16080269 73663144 15926529 70727012 56964696 56421491 28210548 57866469 23099808 15615972 cdd: 10191 xref: COG0317 gene: SpoT desc: Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] num: 40 50365094 81428351 52081239 13508136 76788162 12045134 26553980 42519264 56963335 22538077 15672088 46907751 58337233 42561010 28211806 18310920 20807650 19746884 42783537 28378628 31544390 15675772 57867129 70726288 39938612 73662434 15903530 29376496 15613805 78044718 24380383 55820243 23099479 56421113 25011966 13357843 16079814 15895542 15927214 15901481 cdd: 10192 xref: COG0318 gene: CaiC desc: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] num: 82 52078753 73663735 56420040 15613694 15927371 16078091 78042829 16080131 16077484 42782699 78043399 78043305 78043276 23098631 70726133 23100121 50812234 56962123 56419228 76788120 15925937 42783699 57866145 56419850 15903010 23099577 15614495 56419853 23098124 78042621 42782489 52081357 56419203 19745648 16078886 16079908 24379757 56421225 78044063 56420671 20808364 56420010 15615665 56419565 16078100 46907903 73662279 78045056 56964438 56962365 56965380 23100125 52079510 56421317 23099777 29375077 78045072 25010583 15673764 52081565 23098513 23099672 56420026 42780268 30024008 22536646 52080516 56421407 42782697 15674626 52079556 56963714 70727417 57867277 15614569 56962124 42780041 73663455 42784058 15615666 56420133 15926253 cdd: 10193 xref: COG0319 gene: COG0319 desc: Predicted metal-dependent hydrolase [General function prediction only] num: 44 81428486 70726347 47459183 56421026 26553790 12045250 15927150 28378612 13358053 46907693 23099408 22537644 76788021 18311000 15902913 31544598 39939110 42783429 54020099 15828849 15613926 28211644 20807452 13508308 24379999 29376907 42519247 15900844 52081079 73662495 15674590 71894404 15894575 56963443 42560996 78043035 19745597 25011603 16079586 15673068 55820696 58337484 57867019 50365081 cdd: 10194 xref: COG0320 gene: LipA desc: Lipoate synthase [Coenzyme metabolism] num: 12 15926513 52081728 56421509 70727029 42784155 56964714 57866448 50812289 23098739 73663159 20808098 15615997 cdd: 10196 xref: COG0322 gene: UvrC desc: Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] num: 46 15902587 73662958 56421210 55821309 15926730 76786803 78044731 42560845 15672822 31544559 18309334 16079901 58337244 15893799 28378731 22537378 70726816 46907077 47459380 42518995 15675060 13357942 15828627 52081351 39938919 50364916 23099571 15615659 25011343 15900526 19746037 26553580 15896707 12045058 24379665 54020325 56964432 57866656 71894293 81428665 20808370 13507864 29375973 46907453 28212079 42783693 cdd: 10197 xref: COG0323 gene: MutL desc: DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] num: 32 15895111 15902204 15674190 57866809 42518562 16078768 28378883 52080311 46907632 25012090 28210986 15900110 42782852 19746988 55820157 56963951 56419842 22538232 76787614 29377616 23099087 15675871 78044214 20807805 70726617 73662773 15926879 81427977 24380423 58336746 18310138 15614931 cdd: 10198 xref: COG0324 gene: MiaA desc: tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] num: 35 78043010 31544372 46907520 23099089 73662766 42782791 29376670 28378283 15926886 56963949 58337768 57866823 55821186 15902632 20807806 24379872 19745983 81428937 26553954 42519489 15900572 28210985 15895110 22537371 15674941 25011334 70726607 15614929 56419847 18310139 52080340 39938761 16078796 76787592 15672608 cdd: 10199 xref: COG0325 gene: COG0325 desc: Predicted enzyme with a TIM-barrel fold [General function prediction only] num: 18 78044191 70726728 19746469 15675419 55820802 76788184 46908267 15615113 15673850 15895390 16078602 15901500 25010596 24379034 15903552 73662892 22536659 15926771 cdd: 10200 xref: COG0326 gene: HtpG desc: Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] num: 9 46907174 16081033 18309398 28211165 52082537 15896558 56962744 15613570 23100613 cdd: 10201 xref: COG0327 gene: COG0327 desc: Uncharacterized conserved protein [Function unknown] num: 25 29375948 70726358 78043187 28378555 15927139 15613943 54020014 42561003 56963458 26554288 73662506 13357911 42783415 46907680 52081054 56421013 15894585 31544591 47459123 15673055 23099395 15828927 16079572 50365088 81428497 cdd: 10202 xref: COG0328 gene: RnhA desc: Ribonuclease HI [DNA replication, recombination, and repair] num: 20 29376279 20807809 58336468 42780788 78043013 28379120 56963779 70726474 46908112 57866933 23099704 81428555 73662614 52080709 23099909 42780791 15927014 15614333 16079258 42518184 cdd: 10204 xref: COG0330 gene: HflC desc: Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] num: 20 28210405 15615716 15904003 15615717 25010205 23098338 55821509 15672610 15901966 18310042 22536317 15901946 76786719 15675701 78043294 15903982 19746809 81429153 42779411 15828539 cdd: 10205 xref: COG0331 gene: FabD desc: (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] num: 38 25010408 15902424 78043865 42782944 56419724 16078653 24380113 22536830 73662848 56964067 15675599 15900339 18310051 81428428 57866673 76787379 23098978 15615055 16078772 25010701 50812232 15895289 28378363 46908040 24379756 52080193 20807920 70726685 28209900 15926813 55820477 29377348 19746707 15672755 76788099 24379748 22536530 15896809 cdd: 10206 xref: COG0332 gene: FabH desc: 3-oxoacyl-[acyl-carrier-protein] num: 12 16078081 16078198 15675602 57866515 15894101 15613327 15614407 52079504 46908436 15895281 15926572 70726974 cdd: 10207 xref: COG0333 gene: RpmF desc: Ribosomal protein L32 [Translation, ribosomal structure and biogenesis] num: 43 46906732 50365214 24380437 52080110 42783017 15828795 25012100 15926712 15903984 57866630 81428650 29375198 71894186 29375627 70726826 15672076 26554372 55821941 12045223 56964136 73662969 76788212 13508279 47459191 22538243 39938684 13357893 28378248 15675900 15615146 29375162 15895022 78042787 58337250 23098911 56419640 31544352 19747000 15901948 16078572 42561123 46908282 42519001 cdd: 10208 xref: COG0334 gene: GdhA desc: Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] num: 48 29375982 16080831 76786874 56965154 56420770 15894024 73663126 16079464 23099324 22537482 20807791 15616504 23100333 46906805 57866471 55820517 20807660 52081317 52080946 56418724 28377945 15901165 20808583 70726993 56420566 78043123 15614664 15615281 18310500 16079353 73663483 20808582 56964218 15615328 56963627 15926547 42783283 15613387 23099265 28210980 25011447 15612781 42780691 15903224 56420916 24379360 15614185 52080807 cdd: 10211 xref: COG0337 gene: AroB desc: 3-dehydroquinate synthetase [Amino acid transport and metabolism] num: 30 57866980 42780718 73662588 15901229 28377879 81428504 19746513 23099239 15903276 15894181 29376126 18309677 15675468 78042786 29377594 56420741 25011490 56963658 24379238 46908160 15927046 15614220 56182547 70726448 20807491 76788368 55820719 28211282 15673738 22537525 cdd: 10212 xref: COG0338 gene: Dam desc: Site-specific DNA methylase [DNA replication, recombination, and repair] num: 15 54020632 39938844 26553577 47459180 28379017 78045191 26553632 39938895 58336808 39938804 28210142 81427753 15896601 15616565 24378988 cdd: 10214 xref: COG0340 gene: BirA desc: Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism] num: 34 56420715 15903757 56963833 15927037 15893505 25010903 15893878 15901727 15614248 29377684 15673762 70726457 15673885 16079301 76787252 42780740 78045046 19746334 24379962 28377257 55821182 81428844 73662597 15675294 46908137 52080752 20808369 28377696 28210569 18309655 22536994 81428437 57866956 23099219 cdd: 10215 xref: COG0341 gene: SecF desc: Preprotein translocase subunit SecF [Intracellular trafficking and secretion] num: 21 46907755 57867140 71894189 52081243 23099482 56421117 15613800 18310923 28211809 78043746 15927217 47459107 73662431 20807645 15895545 15829130 16081162 70726285 54020361 56963331 42783542 cdd: 10216 xref: COG0342 gene: SecD desc: Preprotein translocase subunit SecD [Intracellular trafficking and secretion] num: 20 46907755 15895546 57867140 71894189 52081243 23099482 56421117 20807644 78044509 15927217 56963330 28211810 18310924 73662431 15613799 15829130 16081162 70726285 54020361 42783542 cdd: 10217 xref: COG0343 gene: Tgt desc: Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis] num: 30 15672134 55821778 24378803 78044870 19745353 15901878 73662429 70726283 28211814 81427991 46907758 56963323 52081249 20807639 56421122 28378876 57867142 15927219 76787044 25010505 15613791 22536579 18310927 23099488 42783548 29375480 15903910 16079824 15895550 15674403 cdd: 10218 xref: COG0344 gene: COG0344 desc: Predicted membrane protein [Function unknown] num: 45 19745972 26553854 78043914 47458953 15672960 15614202 71894045 67078275 50365153 28378502 42560671 42518259 46907511 13357966 58337411 78043926 24379636 70726556 23099144 42781562 58336531 31544590 15926933 15902799 81428588 25011279 42519095 52080432 15674929 55820666 56963642 20808045 73662714 29376197 15900736 23098018 42782674 15828766 76788210 56420301 57866860 56965053 22537313 15895765 39938922 cdd: 10219 xref: COG0345 gene: ProC desc: Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] num: 45 78042830 29375544 15927084 52081110 15614066 24380318 46906627 42783253 52080912 56963410 19745290 81429202 20807808 23097468 56420866 15673866 28212016 42779298 46907615 15613894 16079437 42783455 56963530 15902878 76788429 50364860 15674334 56421053 52080522 55821824 56963019 29376918 70726414 18311615 52079789 15900813 57866977 25010246 28377443 42782087 16078356 73662559 15896497 15613450 22536357 cdd: 10220 xref: COG0346 gene: GloA desc: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism] num: 31 46906507 16078352 52079786 67078224 46906998 15672059 15928098 15926039 73661701 42780192 46906997 23099597 42782722 56965780 29376223 16079015 56963791 16077616 15614738 52080400 22537869 42782354 23098490 67078226 29374997 29375454 70725555 76787053 42780191 73661700 29375265 cdd: 10221 xref: COG0347 gene: GlnK desc: Nitrogen regulatory protein PII [Amino acid transport and metabolism] num: 10 52079584 23098667 24380035 46907745 52082176 15673573 55820578 15893547 15893969 78042932 cdd: 10222 xref: COG0348 gene: NapH desc: Polyferredoxin [Energy production and conversion] num: 6 78044939 78045216 28211156 20807564 15896018 28209913 cdd: 10224 xref: COG0350 gene: Ada desc: Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair] num: 37 58336594 78043483 42782823 52081188 18309324 20808873 46906315 56419480 26553638 15903360 42518339 42781173 15896506 70725508 16078418 52079903 16077250 76787507 24380030 15672513 15612956 22537707 73661631 15828566 15613584 15928126 46907228 57865562 56963232 56964918 81429454 15901313 25011658 23098191 28211090 28379318 29374916 cdd: 10225 xref: COG0351 gene: ThiD desc: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] num: 44 42784587 18310320 15903493 29374848 28377063 23097929 28211403 56963392 56965690 25010913 15672469 15673245 23098495 29377248 20808610 56421985 57866160 15900623 46906912 70725942 15902682 81427672 52082298 15927668 81428963 15613998 73662099 73663444 22537004 56420045 42779881 46906555 15675713 56963502 15901438 70727411 15926258 52079674 15896346 19746821 16078236 76787463 57867632 16080853 cdd: 10226 xref: COG0352 gene: ThiE desc: Thiamine monophosphate synthase [Coenzyme metabolism] num: 28 73662101 56963498 42779876 70725566 15613994 18310581 20808608 56419157 28377064 57865486 57867630 15902674 46906556 15893786 70725944 15900622 78044019 15927666 29377249 15896173 28211401 15673244 15900615 28211397 16078231 52079669 18310318 15902681 cdd: 10227 xref: COG0353 gene: RecR desc: Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] num: 41 15672322 25010841 28377568 70727531 52078516 42518520 15901507 18309029 19746381 15675339 42779103 47458910 50365492 57866112 58336716 31544803 16077089 28209847 20806579 15612599 15903559 46908881 55820693 56418554 13357645 26554261 15893423 78042767 22536930 81427952 73663585 15926157 29377240 71894077 42560607 54020351 23097486 56961821 76787474 24379076 15828522 cdd: 10231 xref: COG0357 gene: GidB desc: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] num: 41 39938753 15903207 31544848 56965872 15616622 56422027 42519771 55820410 70727673 25011716 78044839 15928295 42784678 57865944 26554254 23100944 15828599 15896963 13357596 16081152 18311635 15673325 29377741 76787171 19745444 52082646 73663751 22537769 20809123 24380281 15901145 47459402 28379586 15674490 54020291 28209871 58338077 50365477 46908989 71894174 81427630 cdd: 10232 xref: COG0358 gene: DnaG desc: DNA primase (bacterial type) [DNA replication, recombination, and repair] num: 53 70726355 76787887 56963454 50365085 13358057 20808421 15672534 42561000 25011539 39939055 57867493 15894480 73662503 15613938 54020012 15828924 15894581 15903022 15674826 23099400 15927142 29376086 39939035 47459126 26553795 42519242 15900941 39939058 42783420 39939171 58337479 39939113 18310990 81428493 16079576 28211634 78044503 20808175 22537573 39939130 56421018 52081068 13508092 31544594 19745865 12045104 28378606 71894466 39939010 24379276 55821466 57867103 46907683 cdd: 10233 xref: COG0359 gene: RplI desc: Ribosomal protein L9 [Translation, ribosomal structure and biogenesis] num: 43 42784665 50364898 56965859 28209883 15672727 15896948 15925720 31544816 57865907 12044945 54020646 52082627 23100916 29374672 47459007 20809104 78043341 15675918 24380469 56422012 19747017 46906284 39938498 15904050 22538274 15828987 42561471 42518096 58336365 70725015 76787578 81427627 13507970 15616592 25012134 55821967 13358115 18311618 15902011 73661324 71894441 28376985 16081102 cdd: 10234 xref: COG0360 gene: RpsF desc: Ribosomal protein S6 [Translation, ribosomal structure and biogenesis] num: 41 58336361 25011798 55821726 19746764 15926066 15901385 42784670 20809110 18311624 26553568 15896955 15616612 42518091 15829082 76788641 15903439 28376981 54020446 81427623 56422017 16081143 70727627 78042831 22537853 47459062 15674173 29374668 73663682 31544819 57865983 23100934 56965864 50364895 13358118 24380220 52082636 46906275 71894543 39938495 42560587 15675658 cdd: 10235 xref: COG0361 gene: InfA desc: Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis] num: 42 15674054 58336651 15612721 13357813 71894588 76788620 50364961 24380347 42779214 26554443 18311363 47459092 56961955 29374873 70725825 39938709 28377854 52078633 13507926 57867679 56418664 46908782 25010155 15900168 55821883 20808637 16077207 31544836 42518451 15674309 15902255 54020092 12045026 23097596 78043777 22536265 19745263 81429356 73661994 15829036 15927808 15896360 cdd: 10236 xref: COG0362 gene: Gnd desc: 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] num: 24 81428995 15902379 50812264 58338212 29375628 16081060 20808345 20806721 56963691 52080930 70726407 15927092 46907604 56420879 28211502 73662553 28378252 15672604 23097640 42519900 15900298 23100642 52082571 57866991 cdd: 10237 xref: COG0363 gene: NagB desc: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] num: 44 50364846 46908528 57866141 15926247 15927428 15675320 46907110 15901269 70726109 26553773 46907189 29375097 70725279 25010874 52082623 15893480 42519872 22536963 16077305 42783168 71894215 54020607 73662250 15673555 15828833 26554401 76787681 42561343 24379109 18311416 15673883 19746362 28377158 29375082 58338189 16080555 81428031 55820621 15903315 46908907 15612983 57867279 73663458 73661544 cdd: 10239 xref: COG0365 gene: Acs desc: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] num: 38 70726190 58338169 15928195 73662339 56964524 15615796 23097959 52081449 56421341 57865519 78044614 15613700 42783847 16080008 56420526 52080510 56421328 56965019 16080020 52081468 15927310 46906595 29375083 70725437 42781615 56420020 15672644 23097477 78044347 23100098 42783827 78043839 42784058 15615763 73663698 56420010 56421294 46908899 cdd: 10241 xref: COG0367 gene: AsnB desc: Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] num: 26 56419235 42780333 42518221 15895511 42780898 28379500 50812210 81428251 78042874 56963533 52079582 15672334 58336505 15674210 56419441 39939080 15614071 20807299 23100063 56964345 16081043 16080106 28377797 52081540 46907894 42781344 cdd: 10242 xref: COG0368 gene: CobS desc: Cobalamin-5-phosphate synthase [Coenzyme metabolism] num: 8 18310018 15614155 78044598 15894663 56420795 20806894 46907365 28210440 cdd: 10243 xref: COG0369 gene: CysJ desc: Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] num: 15 16079770 52079706 70725415 23099108 56962392 16080397 42782294 52081199 16077792 56419944 73663717 73663727 15928206 57865556 15613172 cdd: 10244 xref: COG0370 gene: FeoB desc: Fe2+ transport system protein B [Inorganic ion transport and metabolism] num: 25 55820687 42784011 28210204 24379050 56420017 28210895 20808269 57865572 20808271 56420383 20806764 15928162 46908340 28210676 18310642 52079197 57865773 52082547 29375106 56421615 28378183 15894318 15672169 15928129 15893739 cdd: 10245 xref: COG0371 gene: GldA desc: Glycerol dehydrogenase and related enzymes [Energy production and conversion] num: 33 56962185 22538181 15902278 76787895 57865691 76787243 18309081 29375925 15675817 52082540 52078712 15614425 46907967 19746930 23097778 24379725 15894904 29377594 29375479 56962653 24378979 15673538 28210331 25012040 25010395 22536516 52079262 23100783 52081379 56962336 15900188 78042821 16079928 cdd: 10246 xref: COG0372 gene: GltA desc: Citrate synthase [Energy production and conversion] num: 22 42783771 23099724 52081415 56963570 55821272 15615722 15616486 15672652 57867184 23099623 42781439 24379144 70726231 52082381 56421271 16079966 73662380 56965801 15927273 46907798 56964480 52079422 cdd: 10247 xref: COG0373 gene: HemA desc: Glutamyl-tRNA reductase [Coenzyme metabolism] num: 16 16079869 46907787 56421182 57867147 70726256 15893391 56964397 28210446 15615610 52081300 42783603 18310419 73662401 15927251 78044730 23099525 cdd: 10252 xref: COG0378 gene: HypB desc: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] num: 10 78044645 15927873 15612820 57867800 42782709 20806659 13357992 56420462 55820381 73661569 cdd: 10255 xref: COG0381 gene: WecB desc: UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] num: 29 78042692 15925859 15896128 28210072 15900289 15925868 15900286 57867663 73662082 58337978 70725395 42784352 28377947 81429133 15927685 20807152 56421697 46908709 18311178 24379839 15896315 20806681 15673248 42519472 58336945 16080619 52082102 29377381 70725925 cdd: 10256 xref: COG0382 gene: UbiA desc: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] num: 7 28210976 15614213 78042717 15895094 15894087 52080091 56963652 cdd: 10257 xref: COG0383 gene: AMS1 desc: Alpha-mannosidase [Carbohydrate transport and metabolism] num: 19 56420437 15675486 18310397 15613354 18311062 15903992 15901956 42561365 18309838 15673480 29376259 46908242 46906639 19746531 28379933 46906663 46908920 15613352 46908244 cdd: 10258 xref: COG0384 gene: COG0384 desc: Predicted epimerase, PhzC/PhzF homolog [General function prediction only] num: 17 56965052 67078273 15612846 29376715 56418941 15896687 15614513 56962630 42782163 52078656 29374770 46907020 16077914 20807216 76788297 15614527 42782484 cdd: 10259 xref: COG0385 gene: COG0385 desc: Predicted Na+-dependent transporter [General function prediction only] num: 15 16077227 24379079 56963381 16078995 56962994 15613421 23098449 52080628 42782580 73661894 52078654 55821333 15613052 56420523 15927901 cdd: 10260 xref: COG0386 gene: BtuE desc: Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones] num: 29 57866833 15894827 30024038 73662764 73662946 52080698 15615393 19745714 57865566 28377153 23098025 26553964 56420320 18309936 46907216 56963038 23097718 70726605 15928207 15900246 15674687 18309893 13357851 16079249 15926888 15894848 15902329 15894849 42781267 cdd: 10261 xref: COG0387 gene: ChaA desc: Ca2+/H+ antiporter [Inorganic ion transport and metabolism] num: 5 52079257 56418958 18310356 16077859 42779615 cdd: 10262 xref: COG0388 gene: COG0388 desc: Predicted amidohydrolase [General function prediction only] num: 32 15902867 55820545 28377336 16078421 15894337 73662152 28210403 73661409 24380286 57867367 15613610 20807133 23100566 15900802 15895058 70725998 52079907 39938609 56419955 56421986 15613652 18310040 52079400 56419486 15927609 16077990 56961796 46907023 56963261 15894942 46906523 42783148 cdd: 10263 xref: COG0389 gene: DinP desc: Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and repair] num: 46 55821632 76787674 57867359 73662205 13358000 56963934 78043703 42518567 15615304 46908855 22537865 31544777 71894336 15675671 29377230 70726059 28378874 24378896 15674011 42783260 26553602 15902458 46908202 47459110 70726546 20806775 15614035 15927469 54019998 15900374 42561082 52080931 18450349 28210190 57866878 15828659 25011810 15893577 73662697 19746777 15926944 50365144 58336751 18310548 23099313 81427996 cdd: 10264 xref: COG0390 gene: COG0390 desc: ABC-type uncharacterized transport system, permease component [General function prediction only] num: 18 58337765 15928032 57865423 81428589 29377231 28379604 73661751 20806838 70725599 25010719 76788594 55821641 42784125 22536854 16078289 78044391 42518651 23097902 cdd: 10266 xref: COG0392 gene: COG0392 desc: Predicted integral membrane protein [Function unknown] num: 31 42519645 25012125 13508174 73662706 28378039 16077909 18310230 28377559 18310229 47459037 81428076 12045162 55821263 15896268 57866874 52079302 81427946 46907926 13358013 20808408 70726550 29374689 22538265 31544744 15926940 42780664 46908724 15828955 54020287 76786731 58336782 cdd: 10268 xref: COG0394 gene: Wzb desc: Protein-tyrosine-phosphatase [Signal transduction mechanisms] num: 19 28377022 15615560 56421757 73662078 42518317 15616331 15004808 56421908 56419124 42784489 57867675 15673355 23100443 56965625 46908464 42518939 20807481 56962611 18309820 cdd: 10269 xref: COG0395 gene: UgpE desc: ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] num: 131 42561053 23100023 39939236 56420656 46908236 13507875 16080081 23099544 19746524 56962461 15616409 56964887 29375806 56964977 56962214 15901626 18309560 15614489 29376739 15616244 15614475 56964882 46906412 28378073 46907092 52081515 15893719 20807283 31544452 56962908 15828499 15903568 56962333 15614787 52079784 15613809 76788427 56962167 42780970 16077779 23100663 18309355 15901722 15900034 58337901 50364841 56965061 20808340 52081376 56962098 71894127 28378074 22536221 18311063 52081843 15828970 23100927 23100576 25010110 52079550 42519669 15613466 15896902 19745386 52079768 23100007 56962987 56962180 12045042 15613641 20807287 56962436 15674435 15828571 56965260 15902126 56421740 52082461 58337711 15901523 20808776 46909026 15615287 15613629 24379334 56962176 56962120 16080311 56965536 56965202 46908670 56965044 46907962 15903752 56962134 20808713 16077766 15901516 56965345 15614676 15903575 23098231 15893954 58336833 15613044 54020173 29376729 29377369 56962918 16079925 56965036 71894347 20808246 15614429 15673478 56962142 56421807 15616250 54020177 16080069 56965231 42779710 28379944 15613358 15903660 15675479 76787777 31544240 15613682 56962502 23100877 cdd: 10270 xref: COG0396 gene: SufC desc: ABC-type transport system involved in Fe-S cluster assembly, ATPase component [Posttranslational modification, protein turnover, chaperones] num: 50 28210476 42561483 29374881 25010212 24378756 22536326 29377136 13358124 20809017 29376891 55820262 15613381 18310950 15675928 15674460 15673775 15926502 56965751 16080323 70727040 23099835 28378072 15893537 42784166 56964742 28378185 15616033 57865974 15895310 73663170 31544481 46908586 42519064 16080462 15896533 46907954 19747027 56421530 19745414 57866417 81428722 52081756 15902815 56419206 76786975 73662645 26554201 15900750 56965510 42781482 cdd: 10272 xref: COG0398 gene: COG0398 desc: Uncharacterized conserved protein [Function unknown] num: 51 81429486 52080324 58336975 15672877 22537077 18310594 18309561 42779746 73663121 52081399 18309141 15893965 52079528 78043741 15895963 23099603 16079625 24379708 55820674 42519656 25010979 15901553 29377132 42780316 56420226 70726988 16079949 15675241 57866476 81429440 28211417 23098634 29377394 16078112 56419214 24379310 42519651 15615697 24379625 28212002 28379428 15903607 58337887 15614856 46907166 76786920 15926552 18310546 29376431 20807030 19746211 cdd: 10273 xref: COG0399 gene: WecE desc: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] num: 22 28211300 16080840 23100348 15903696 28211301 52081977 15895528 28211361 52079236 52079242 56421662 20807158 20807143 23099871 18309446 70725400 15895447 42784439 50812296 42781096 15901666 15895617 cdd: 10274 xref: COG0400 gene: COG0400 desc: Predicted esterase [General function prediction only] num: 18 15672058 52080646 67078227 29376224 29375266 16079744 29375607 42782721 23097899 70725557 56963790 15928097 46906999 73661702 16079014 15614737 56419283 46906825 cdd: 10277 xref: COG0403 gene: GcvP desc: Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism] num: 13 73662528 20806815 70726381 52080992 56964259 46907575 57867046 42783350 15927116 78044154 56420959 23099358 15615378 cdd: 10278 xref: COG0404 gene: GcvT desc: Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] num: 17 15615379 52080993 56420960 42783351 46907574 15927117 70726380 16079513 78042904 76787076 22536837 56964260 23099359 73662527 20806817 25010708 57867047 cdd: 10280 xref: COG0406 gene: GpmB desc: Fructose-2,6-bisphosphatase [Carbohydrate transport and metabolism] num: 100 42519788 15894664 42780893 28377768 58337357 81429466 24379171 46907467 15902263 28377791 15893461 19746719 52079521 28210438 15675611 25010166 15672931 81427741 56963196 28377732 15902068 42518913 42518469 16078098 25010828 29377147 42782548 15673802 57866381 18310020 15900176 29376927 42782828 46907366 22536916 56420794 15899970 20807793 46907142 15613454 58337936 15674681 28379335 15896273 58336826 15900859 23099187 24379539 15926077 15612848 42783479 46906802 28377140 19745708 28378779 76787906 24378599 58337131 42781179 29374913 52079817 24379537 29377445 46906762 56420001 42781226 76786796 56963016 46906801 70727060 81428416 42518634 42518465 15614156 15673723 42784153 23097792 56963065 24380445 28377733 46906508 15673696 28378458 15902931 42519719 55820764 18309065 24379538 58336677 58336827 58337340 15613299 15926477 58338089 28379269 22536277 42519787 42783029 28212205 55820212 cdd: 10281 xref: COG0407 gene: HemE desc: Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] num: 10 15927408 56963303 23098622 42780242 46908446 57867299 56419196 15613765 73662274 70726129 cdd: 10284 xref: COG0410 gene: LivF desc: ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] num: 24 31544793 15895268 15612810 56420198 12044971 56421511 15893403 15903540 42781081 25011668 56962862 56421557 28379416 76787759 22537718 56420468 78044858 15902707 78043352 15673085 55820456 23098141 24380043 15900648 cdd: 10285 xref: COG0411 gene: LivG desc: ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] num: 20 28379417 23097717 25011669 78044958 56421558 15894647 78042991 24380044 78042618 56421512 13508348 13358103 15902706 76787099 23098140 55820455 22537719 15900647 42781080 56420197 cdd: 10286 xref: COG0412 gene: COG0412 desc: Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] num: 12 23099918 46906999 52079436 55820323 16080077 24379106 15615868 52080379 16077470 67077979 52081517 42780873 cdd: 10287 xref: COG0413 gene: PanB desc: Ketopantoate hydroxymethyltransferase [Coenzyme metabolism] num: 15 57865621 78044137 16079300 46908135 56420714 73661463 29376394 15614250 23100729 52080751 42780742 56963832 15896167 15928185 70725182 cdd: 10289 xref: COG0415 gene: PhrB desc: Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] num: 8 15926368 29376159 42782239 70727202 57866289 15675407 46906833 19746457 cdd: 10290 xref: COG0416 gene: PlsX desc: Fatty acid/phospholipid biosynthesis enzyme [Lipid metabolism] num: 42 56419723 29377568 15828633 20807923 15615056 42782945 23098977 47459247 39939093 78044247 76786784 15902081 58337583 15899983 13357764 55820131 28378327 15674266 81428315 15926812 70726686 42561015 31544698 28210929 19745217 15895023 15672052 24378554 22536207 46908041 71894684 26553817 56964068 42519401 18310702 73662849 16078652 52080192 25010096 57866672 50365046 13508285 cdd: 10293 xref: COG0419 gene: SbcC desc: ATPase involved in DNA repair [DNA replication, recombination, and repair] num: 31 73662720 18309198 15673303 52079567 10956337 57867844 70726562 57866847 15926927 46907874 23099705 56419219 42519552 29377169 55821382 42781454 21392808 42519889 26553606 28378257 15895993 57867504 16078129 16079194 18311141 56963962 78044702 57867198 20806787 15927333 31544755 cdd: 10294 xref: COG0420 gene: SbcD desc: DNA repair exonuclease [DNA replication, recombination, and repair] num: 39 15614945 58337853 73662721 57867319 42783623 23098599 52079566 56419218 29377170 15895994 20806786 52079478 15673304 15927418 42519553 73662264 28210314 42780185 16078055 78045109 70725625 28378258 57866846 81428238 18309197 55821383 70726563 73661785 56963963 28378144 42781453 70726119 46908456 15926926 46907875 23099706 50812209 18311142 29375279 cdd: 10295 xref: COG0421 gene: SpeE desc: Spermidine synthase [Amino acid transport and metabolism] num: 17 78045036 42784545 56421940 18309532 20807781 78042946 56420275 15902863 15900798 15616373 56965656 16080802 20808167 28211850 52082261 15614477 15895861 cdd: 10297 xref: COG0423 gene: GRS1 desc: Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] num: 20 15828922 70726352 57867007 50365084 42784099 15896443 47459127 15927145 56421965 42560999 13358056 73662500 20807458 12045105 18311446 28209979 26553794 39939112 71894465 13508093 cdd: 10299 xref: COG0425 gene: SirA desc: Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones] num: 14 20808292 20806612 57865855 78043432 29377053 15925751 56419290 15925790 57865845 78044446 78044678 20806610 78043227 18311218 cdd: 10300 xref: COG0426 gene: FpaA desc: Uncharacterized flavoproteins [Energy production and conversion] num: 13 28211064 28210710 20807480 28211481 18309763 78044321 15894314 15894777 18309270 28211510 15614756 15895714 18309996 cdd: 10301 xref: COG0427 gene: ACH1 desc: Acetyl-CoA hydrolase [Energy production and conversion] num: 6 71894548 31544325 42781017 78043112 78045205 23100570 cdd: 10302 xref: COG0428 gene: COG0428 desc: Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] num: 15 73663309 78044566 28210065 46906651 20806673 55821254 28211003 57866310 15828763 70727174 42781489 23099882 56419492 18309703 24380404 cdd: 10305 xref: COG0431 gene: COG0431 desc: Predicted flavoprotein [General function prediction only] num: 62 24378694 29376250 28379620 28377171 76786735 58338082 23100534 42519776 24379810 55821797 57866124 15901321 58338081 15614613 46908521 15926238 15903445 73661535 23098493 24379526 81428928 15615883 73663463 70727431 31544471 42781374 28378151 24378693 29375800 15895272 28379807 28378150 15901322 56962373 28377018 15672349 28377075 26553749 55820168 56965161 23097811 76787867 22537240 52079414 15901389 22537241 28379225 29375799 15903368 15926041 25011164 13508256 42519777 24378644 24379527 28379224 19746869 15675757 25011165 15903369 12045201 23100601 cdd: 10307 xref: COG0433 gene: COG0433 desc: Predicted ATPase [General function prediction only] num: 16 29376783 56899879 42780213 56961842 29376407 15612615 29374808 54020238 44004364 24378710 78045019 78043151 29376849 24379156 67078106 16077561 cdd: 10309 xref: COG0435 gene: ECM4 desc: Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] num: 6 25011433 22536964 76788588 22537468 76787958 25010875 cdd: 10310 xref: COG0436 gene: COG0436 desc: Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] num: 132 16079294 29377727 16078422 16078464 56963257 22536703 15893666 15613499 15896087 57867351 46908130 24379271 15672039 73661603 29375476 15615875 56419487 16080196 22537727 56420707 15928139 28379831 57866512 20808798 46906527 56421463 28377711 42783149 15901817 67078184 55821469 15673898 25011760 25010093 50812284 20807661 46907387 28378139 19745747 29376258 15894288 28210993 52079998 18310889 15673812 15674718 78044747 16079319 15926636 52079908 15613623 46908485 56419570 15903442 15901387 23097875 15895095 23099215 20806822 78042890 22536204 70725493 15899981 29375616 42781994 15614258 73663053 55820867 15895646 46907238 42784486 15902079 52081634 18309323 76788282 20807815 42783107 15615912 29375882 57865588 18310652 46908541 76788130 28379188 55821612 28210979 70726019 24378552 15894992 15675619 24379728 22537816 56420314 15903850 29376870 42784086 15674014 28378041 19746727 42519260 42780748 28378420 25010640 15614758 81427987 18309983 16080821 24380189 70726917 15896223 73662162 16078022 23099737 58337163 15672142 55820129 56418907 58337953 81427921 55820546 52080306 15927510 52080745 18309693 78043844 78045045 23098846 56964677 28377259 76787795 76787613 58337237 cdd: 10311 xref: COG0437 gene: HybA desc: Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] num: 8 78042879 78043167 78044396 78042641 78044498 18310778 78042778 78044751 cdd: 10312 xref: COG0438 gene: RfaG desc: Glycosyltransferase [Cell envelope biogenesis, outer membrane] num: 178 52082089 56962288 73661374 52080754 15615938 15896321 24379970 70726455 28211863 29377356 78045223 28379047 23100345 15616274 56962285 15615944 55821104 23099551 78043529 42780738 52081986 15903267 28378055 28211867 15672195 56419376 56418896 52079240 55821455 56963618 58336847 46908726 15925834 22536873 52079239 56421694 78042978 81429186 42518955 55821112 15613978 18309458 28378038 24379971 20807149 15900282 58337310 42518487 15896164 15616225 52081027 78043527 16079303 42784631 15673437 15674619 28378037 15903025 15896303 15615942 15901589 42784594 15901220 55820649 16080607 18309256 81428818 56419406 73662595 42518483 20807430 15896317 28378724 56419371 15896828 23100381 76787019 20807153 15896554 42518954 20807005 15925861 56964934 15673436 28377976 28210031 56421695 15903026 29377355 42519611 15895671 18311201 81428075 58336781 15674830 28379167 19745633 18309254 15927039 78042947 22537569 15672182 15614868 18309457 42519647 56420717 28378062 42784435 42519196 55820648 15674620 28211857 15674120 56963617 15615251 15896302 22537556 20806796 73661376 57866966 76788087 15900945 15614246 76786921 18311205 15616220 73661419 25010738 19745869 28378725 56963835 15616224 15895611 56421692 52081539 19745634 15674119 15895594 78044606 15616219 25011535 15896308 18309484 22536874 15896319 15894340 15894021 52080578 15900280 52081988 42519646 25011522 58336780 52082095 46908725 18310851 76787544 23100382 20807147 15902179 15895593 25010737 15896267 58337987 15925864 15900944 28377957 23099221 78043748 28377952 42784436 70727250 39938494 20806598 16079546 16080485 42783953 15895799 cdd: 10313 xref: COG0439 gene: AccC desc: Biotin carboxylase [Lipid metabolism] num: 33 57867080 76787868 15902429 15900344 73662537 52082521 15903013 46908959 42782300 19745678 15675594 15927107 55820482 25010413 15900768 15927186 15674655 28211360 16079490 19746702 73662465 73661389 15672760 28377385 29377343 16080823 15902833 56421297 24380108 15615350 22536535 70726314 52078691 cdd: 10314 xref: COG0440 gene: IlvH desc: Acetolactate synthase, small (regulatory) subunit [Amino acid transport and metabolism] num: 22 15927630 56421195 42781004 20806556 55821844 78043291 52081313 24378742 15902446 73662132 16079882 46908212 42780592 78044625 15896424 15900363 57867568 23100077 70725979 56964409 15615622 15673207 cdd: 10315 xref: COG0441 gene: ThrS desc: Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 50 56965736 20808138 15893960 15615703 46907789 54020620 78044971 81429010 56964462 23099609 19745635 42519522 28211884 12045236 15901467 71894192 26553728 70726243 47459403 29377326 15829217 58337807 73662391 15895629 15673893 13358098 70725135 42783753 52078698 15674621 16079947 50364993 56421254 16080808 25010739 13508292 42560810 28378228 22536875 42781481 18311304 15903515 31544379 42560881 15927261 55820651 24379968 52081397 57867165 76787804 cdd: 10316 xref: COG0442 gene: ProS desc: Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 30 15828654 42782910 57866745 13508141 15926846 18311410 15614982 28212194 24380149 81428868 22538051 28378679 25011939 15900198 76788438 56419792 78042796 70726652 15902287 29376876 73662814 52080260 46907545 15896426 15674109 15675760 16078720 55820298 56963999 19746872 cdd: 10318 xref: COG0444 gene: DppD desc: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] num: 126 56420899 15614640 22536374 55821425 25010222 52079633 52079325 70725642 54020549 39938511 70725290 15903746 56965821 76787350 15616202 22536336 15612945 15828756 15616208 42779288 57865358 28211537 15612913 15896875 28378030 15893472 70725151 46907212 15674468 52081166 15612591 56962343 78044273 56964181 26554005 20808879 76788583 15928043 25010262 42780377 15926581 70725882 56420156 26554329 23100070 28211081 20806750 58336543 42519399 57865736 15614362 31544722 15828883 15613133 13507956 19746905 18311252 15896278 71894361 15926960 52079793 42561483 29375495 15926577 23099719 15672329 71894209 23099908 13358124 15901715 73661579 42779332 56965010 29377566 42779806 56963372 16078211 46908427 56419677 54020376 20807109 56961812 15896870 15896863 56962553 46908826 81428320 56963010 24378766 15675790 50364911 22537658 20806870 12044931 76787632 58337581 57866520 31544718 73663291 39938678 23100423 47459284 23097969 57866908 46908964 56419349 42560734 19745424 20808317 52079644 16078360 20806590 56965420 29375272 16078201 23100524 52078984 25011615 73663101 78043619 15896430 70726969 56964858 28211055 42780079 15673823 cdd: 10319 xref: COG0445 gene: GidA desc: NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] num: 46 15928296 12045240 15616623 28379976 57865943 81429489 22538276 16081153 47458989 55821969 15675920 42561530 31544847 15673829 46908999 56422028 15902168 23100945 20807573 18311636 25012136 73663752 15828724 42561553 58338214 20809124 28209870 54019972 13508296 13357595 42784679 42519902 29377752 39938754 70727674 15900062 76786721 24380471 52082647 15896964 78043339 26553620 56965873 50365486 19747019 71894526 cdd: 10320 xref: COG0446 gene: HcaD desc: Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] num: 68 15675542 52081141 76786892 31544690 15672373 57865647 54020439 15672768 15675127 73663113 56965633 15901319 70726980 50365468 18450322 25010340 42561532 42561555 28379772 56420625 28378587 81427927 15828494 58337672 42560811 23098314 15926559 29376458 19746593 19746097 39938927 22536460 24379549 81428190 29377452 71894533 28378572 42780446 25011000 47459455 20809045 26553622 56963607 57866501 22537119 56420626 28377618 76787778 18450326 81428415 12045131 18309716 29376148 23100767 50364852 28377624 13508133 29375784 28379083 15616338 56963160 15674108 15925792 55821286 28378165 28379881 28210870 15903366 cdd: 10321 xref: COG0447 gene: MenB desc: Dihydroxynaphthoic acid synthase [Coenzyme metabolism] num: 12 16080132 42784059 70726918 56421408 23099778 73663055 46907904 15926632 52081566 29375076 57866511 15672711 cdd: 10322 xref: COG0448 gene: GlgC desc: ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] num: 33 24379927 18309050 23097863 47459234 15613649 15895506 15672679 16080148 52081574 15903075 24379926 58337004 15672680 76787471 16080149 15895505 47459233 42784072 28376993 25010928 42784073 15903074 25010927 52081575 58337003 22537018 15900989 28376994 15613650 76788307 15900990 23097862 18309051 cdd: 10323 xref: COG0449 gene: GlmS desc: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] num: 36 46906266 29376660 56962027 57867659 76787649 46908226 52078670 29376476 15927735 56965832 42519455 81428966 58336795 78044517 55820915 23097690 70725881 16077246 24379615 73662038 15902289 42779239 28212122 18311309 28377671 19746203 20808572 15675233 56418690 15900200 15612831 15672988 46906977 15893453 25010987 22537105 cdd: 10324 xref: COG0450 gene: AhpC desc: Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] num: 30 46907834 25011913 42779521 15615228 58337339 15672319 19746952 16081061 15675837 52080021 24379369 81427717 52082573 28210605 70727591 24379223 56964193 26553466 42519079 57866005 76787981 29377215 73663642 15926082 18309764 20806791 22537972 56421110 20808569 16078486 cdd: 10325 xref: COG0451 gene: WcaG desc: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] num: 62 58337675 28379701 42780365 15900288 15928021 29376679 57866153 76788544 24378878 46907974 81427770 28379192 47459414 42779641 42782451 23100508 73663372 70725394 73663473 56964204 81428124 15896740 23100836 15673091 22536918 15926030 15616277 28379511 70725208 29375050 28211362 56965485 15925858 15894081 25011528 42784625 23099549 42782282 15895448 81428663 42779767 15926231 73663503 70725619 28379521 81427930 56964315 42782449 52081516 70727449 15925866 28379440 76788343 15615454 56962911 46907705 58337318 15926335 15673502 22537562 25010830 58337327 cdd: 10326 xref: COG0452 gene: Dfp desc: Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] num: 34 56419704 15675186 56964085 15901093 81428302 52080173 71894032 19746155 20807952 42782961 15894997 25011149 55820841 29377140 70726704 24379512 58337238 22537222 76788626 15672554 16078633 28210905 15615073 46908057 42518827 57866743 78043104 28378314 18310728 15903154 73662869 47459427 23098959 15926794 cdd: 10328 xref: COG0455 gene: COG0455 desc: ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] num: 15 28211314 56419775 25010791 78045153 42782628 25010479 20808474 15614999 16078704 25011026 15895252 15895414 20807867 52080244 23099032 cdd: 10329 xref: COG0456 gene: RimI desc: Acetyltransferases [General function prediction only] num: 74 29376151 25011703 15902604 29376249 22537754 42781507 52079991 58336726 55821743 56961993 15901365 52079049 20807038 70725798 42783475 15613652 15900070 15896501 15672275 15672276 15902174 22537897 24378881 42782028 15675692 16077660 56419553 29376967 70725984 28210371 18311148 70727543 73661729 73661781 73662137 29376966 42779362 15896095 57867554 15903414 24379901 78044332 23100641 15612862 76788557 15672581 46908312 26553583 13357871 23097833 15927625 15902552 15900490 46907352 55821297 19746635 28377584 15614667 28377585 15900546 56418773 28212030 25011840 15613029 28379332 81427964 76788625 56963261 19746800 42518530 15613110 23098102 56962644 15675583 cdd: 10331 xref: COG0458 gene: CarB desc: Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] num: 49 24379315 73662537 70726390 56964098 24379735 23098946 56964318 15927107 42782979 73662878 52080154 46908067 42519201 56419687 25011128 70726712 15673345 15895458 22537201 78044442 15926786 19745911 15615458 56421296 15615099 56419330 57867016 15901135 20807298 70725384 58337434 28379200 29376268 50812217 28377412 15674870 55820608 18311554 52079620 15895902 42519109 58337650 57866726 56965273 81428566 23098535 16078616 15903196 76788218 cdd: 10332 xref: COG0459 gene: GroL desc: Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] num: 37 56418784 70726003 42518557 28377591 24380300 29377118 22538209 19746946 18311271 15901732 56962656 58336743 31544681 55820302 46908303 15672376 76786852 15927604 25012067 57867363 28212000 13508312 15895960 16077670 15675832 15613125 73662157 15903764 12045254 52079060 81427973 39938607 42779370 26553552 78044694 20807076 23098111 cdd: 10333 xref: COG0460 gene: ThrA desc: Homoserine dehydrogenase [Amino acid transport and metabolism] num: 36 56964706 42781119 28379076 56961805 52081720 42781685 46908719 22537278 15613816 15673141 15901215 23097921 70726580 56963343 55820552 78044294 56421499 42784578 20808540 15903262 15926909 15614300 58337494 28377453 15615984 16080279 76786897 20808965 28210599 73662747 25011238 15894285 24379407 29376916 28211948 57866811 cdd: 10334 xref: COG0461 gene: PyrE desc: Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] num: 37 28379197 15674923 25011132 46908063 22537911 19745966 28211970 26554239 42779768 18310159 24379645 55821003 70726710 76787287 25011854 73662876 20807965 16078620 15615095 15893325 56964094 52080158 56419692 15900601 15902658 81428570 57866736 42519208 22537205 15926788 42782975 23098950 58337658 15673050 76786961 29376264 78043163 cdd: 10335 xref: COG0462 gene: PrsA desc: Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] num: 61 29377613 46906754 25011215 28378776 19746072 13507812 15896468 15900963 42518295 18310531 15894106 15674264 25010092 71894173 57866044 58336478 50364891 15903046 52078546 22537255 28209957 24379487 56418579 24378551 31544779 47459401 16077119 15675103 42779129 20808920 12044910 13357751 81429258 26554394 76787283 15828598 15673839 78044887 58336565 70727510 56964914 55820126 15899974 73663565 55821444 76788012 54020290 42518189 29376582 56961861 42561468 18311471 15672796 22536203 46906431 23097514 28377367 15612629 15926177 19745215 15902072 cdd: 10336 xref: COG0463 gene: WcaA desc: Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] num: 4 15926381 52082469 28378155 56420587 cdd: 10337 xref: COG0464 gene: SpoVK desc: ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] num: 15 78044056 39939018 15614852 39939163 16078805 56962295 39939181 56963918 42782787 15674188 52080367 52082457 42780219 15613167 15614926 cdd: 10338 xref: COG0465 gene: HflB desc: ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] num: 57 73663554 15829250 18309580 29374906 52078564 78043977 16078307 31544230 28377431 15902056 19745212 42779144 12045316 15926188 39938793 58336617 15894242 15896449 46906452 16077137 15893891 81429209 15612648 55820115 15899962 13508410 47459375 18311452 20808757 28209972 26554472 20806651 20808395 57866073 13357662 42560599 23097534 76787819 39939199 22536201 39938616 71894624 42518369 70727499 15674261 56418597 39938641 54020382 39939144 15672003 25010090 24378545 56961888 50365487 28212045 28210271 39939064 cdd: 10339 xref: COG0466 gene: Lon desc: ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] num: 25 13508071 12045094 50365222 54020568 15615612 56421185 23099531 31544578 28211964 20807121 42560989 13357908 42783607 26554145 71894328 15893747 47459103 15828990 52081303 15895895 39938934 56964399 16079872 18310372 78044069 cdd: 10343 xref: COG0470 gene: HolB desc: ATPase involved in DNA replication [DNA replication, recombination, and repair] num: 55 15926161 15902880 15828524 70727533 58336720 31544924 26554268 42779101 70727526 57866110 15612607 15672381 56418560 73663587 16077087 15900816 46908883 81427950 25011665 73663581 52078526 15828520 15926155 47458908 56961819 28209849 29377236 81427956 13357575 57866013 28377572 24380040 12044857 56961834 18309027 22537715 16077099 54020353 58336748 78043743 50365490 46906398 23097484 39938717 42779110 13507746 15674540 29377253 15674176 55820573 42518524 19745550 76787329 15612597 28378233 cdd: 10345 xref: COG0472 gene: Rfe desc: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane] num: 64 81428360 73662898 15672850 55820261 78043466 25010211 58337116 15926765 28211292 46907191 76788318 15675530 18310842 73663278 15674459 56419652 55821674 15902349 52082088 46908691 57866681 42518766 70727143 15926424 19745413 22536325 20808075 28210071 70726734 78043881 25010352 24378755 52080121 29375574 23100365 28377593 22536472 56964123 76787388 18310616 46908273 24378944 57866374 81428103 78042942 15895396 42784356 58336990 15615131 16080606 23098923 20806680 16078583 56421704 56964928 42518895 29376706 15896129 23100389 19746580 28378802 15673776 42783007 15900268 cdd: 10346 xref: COG0473 gene: LeuB desc: Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] num: 11 78042663 15613633 52082057 50812181 56962615 15894259 73662129 56962402 15927633 70725976 23098116 cdd: 10347 xref: COG0474 gene: MgtA desc: Cation transport ATPase [Inorganic ion transport and metabolism] num: 96 42561400 58337941 58337513 25010629 15673239 28377449 15901394 29375837 81429316 18310184 42519712 56419699 28211664 15672660 56964089 26553666 58337206 42519270 42561425 55821572 19745727 20808863 15895406 15674699 46907072 42780338 20807668 29377475 56965130 22537074 76787798 58336977 16078629 28211306 15901459 42561387 42519081 42779599 20806569 15903453 28377931 29376085 12044923 23098955 39938738 42519606 24379948 15894551 39938516 13507948 46907051 29375457 46908867 55820834 15615078 42560837 29375919 50365313 42518882 42782965 31544442 58336553 39938672 28210388 15674230 50365172 15903507 58337660 54020044 39939071 42518709 18309315 28379733 42519711 55821161 20807232 52080168 22536693 58336850 42518708 28377072 13357824 15672557 18311036 25010976 26553780 29375872 28378567 15673348 81429181 15828626 76787455 24379191 29376464 42783258 71894582 cdd: 10348 xref: COG0475 gene: KefB desc: Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] num: 39 42779986 20808309 28211100 81427744 25011006 70726949 52079667 42518245 15673897 73663084 76788314 18309952 42779846 16078229 16078049 28379874 78044073 42780803 42784233 57866559 18309219 28210875 15615407 58338173 42519842 28211299 15893735 81429315 56419522 18450360 29374935 22537125 28377734 28379303 15926598 58336523 28377308 42783930 81429257 cdd: 10352 xref: COG0479 gene: FrdB desc: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] num: 14 70726813 56964427 56421206 23099567 78044013 78044506 42783689 15926733 73662955 57866659 52081345 16079895 70725749 15615653 cdd: 10353 xref: COG0480 gene: FusA desc: Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] num: 57 28212177 22537908 28377830 15828899 18309061 28212207 19745405 46908832 54020328 24378856 18309957 13358087 42518427 56418638 29374846 39938750 26553483 18311390 47459202 23097571 42779188 15674242 12044941 15902294 81429380 42782133 15894727 76788704 58336401 20808699 22537086 50365438 78043084 25011851 71894071 28377038 55821761 15900207 16077180 15612694 70727459 31544736 78044525 73663517 42518113 15674452 42560711 52078606 15896387 56965486 57866147 58336628 13507966 15894141 15926225 56961929 20808663 cdd: 10354 xref: COG0481 gene: LepA desc: Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] num: 44 22537069 46907707 15894560 20807432 15828718 28379530 28211657 56421043 73662482 47459238 81428901 31544757 15675045 13508018 52081100 16079605 39938931 15901063 24379799 50365290 42560877 76788416 70726333 26553503 15903125 28378650 55820950 42519349 58337524 78044431 15927165 18311020 42783446 23099427 71894501 12044990 25010971 54020027 29376853 15613905 15673090 13357884 57867041 56963420 cdd: 10355 xref: COG0482 gene: TrmU desc: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] num: 30 70726299 15613824 78042619 22538278 18310765 15672819 15895501 15902166 57866227 73662449 55821970 56421098 15927201 78044681 46907740 20808819 28211134 81428407 25012138 76788488 15675922 56963351 20807693 18311192 24380473 28210754 29376579 28210054 15900060 19747021 cdd: 10357 xref: COG0484 gene: DnaJ desc: DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] num: 45 81428846 56421038 54020022 15902500 25010172 52081094 20807437 58337525 13357969 46907700 31544538 39939189 29375878 16079600 42561138 55820219 15894565 15675605 15613911 42783440 23099422 28378659 28211652 70726338 15927159 24378607 42519350 15674206 31544354 76787155 22536283 73662487 15829204 47459320 15900433 12044869 78044215 19746713 57867036 18311014 50365232 13507760 71894603 56963425 26554350 cdd: 10358 xref: COG0486 gene: ThdF desc: Predicted GTPase [General function prediction only] num: 44 28209869 25010947 15928297 24379659 20809125 58338215 15896965 15902964 52082648 16081154 31544923 15900887 54020066 15828484 50364829 55821017 78044593 28379977 42560644 56422029 12044858 73663753 46909000 57865942 70727675 26554267 81429490 29377753 56965874 47459397 23100946 15674224 15616624 76788077 42784680 19746040 13507747 39939233 13357574 15675063 18311637 71894377 22537039 42519903 cdd: 10359 xref: COG0488 gene: Uup desc: ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] num: 145 42781290 29374676 28377587 23100507 15896201 54020065 29377123 57866318 52080552 76787048 46907659 28212014 29375980 15900664 15829161 28210855 16077628 15903204 16077809 57867540 81427797 25010948 81428613 15672054 28378526 15896264 18310488 58336897 16077804 28377148 42779365 81427920 56963040 56962646 42779575 24379834 15673044 22538305 81429488 73662668 52079052 19745937 52079401 73662141 28379069 16077662 76787146 42518549 70727641 52079208 56963876 15675024 55821287 57866839 25011452 70726521 15674895 25012165 16078507 15896259 15902722 22537208 28210316 20807041 23098154 15673537 42519355 19747041 46908309 46908948 52080044 42782044 15895971 15904076 29376586 22537487 73662447 56418775 55821987 56965103 15613113 70727304 15896582 23098106 19746009 22537040 23098311 50364868 28379364 15672881 18310452 15903455 15903065 42779326 29377198 15614588 23097846 15927622 42519048 15672082 52079192 15926397 70725986 55821265 15893818 76787085 29376138 26553810 55820513 42560672 24379354 81427969 15614463 70727173 76787292 42519740 71894104 58336734 15926972 24380487 25011135 73663308 47459458 58338016 42781679 23097904 46907154 28210323 15675171 24379260 46908108 52082538 18309766 15901396 15900981 15675942 58337529 19746138 15901142 18309119 56961846 42784609 42519283 18311526 15902034 cdd: 10360 xref: COG0489 gene: Mrp desc: ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] num: 46 16077222 42784445 56965573 15927746 20806648 15896291 56418678 56961977 15616230 52078648 70725876 15900278 28210018 76788321 15925854 42784443 18309474 57867670 42782628 15928249 15896234 81429124 28377972 15896311 16080489 15896294 73662029 42518949 28378729 18311494 46908762 56421861 55821121 70725390 42779228 52081990 18309444 73661370 25011294 22537330 20807221 16080678 23097651 23100355 58337993 15612803 cdd: 10361 xref: COG0490 gene: COG0490 desc: Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism] num: 16 19746188 18310347 16078050 28210604 15896105 18311287 29377124 15673435 22537292 24379501 25011250 76786903 42783931 16079818 42784234 15675218 cdd: 10362 xref: COG0491 gene: GloB desc: Zn-dependent hydrolases, including glyoxylases [General function prediction only] num: 115 42782883 56419588 15894682 15927324 15615383 56421357 70726176 56962301 42781568 13358135 23100105 15896918 56420865 15894703 15614286 23097765 15896622 56965176 28211574 15901482 52080565 42782517 52081013 78044793 73662520 16079436 15926675 78043772 28211043 56419936 52080911 28210892 78043247 70726372 15895540 42783886 28211804 56420600 56420291 42779943 16078517 56419813 16080041 23099371 15615822 42784187 46907259 28210507 18310918 55821167 42518155 22536700 52079216 42781502 57867063 52080053 16078968 15925727 55820863 19745744 15613039 56420974 15903533 15615225 46907808 15613445 73662325 42783073 15614400 70725373 16078741 52081140 29376926 28211529 23099695 15674716 52081147 29377218 50365471 16079535 15894665 15925791 24379905 23100120 25010637 52081489 67078150 57865846 46907845 56964264 42782195 15896059 56420531 15614756 23097964 16079704 76786744 16078771 78045201 20807652 56420609 15925750 42783252 78045105 42783387 46908400 24379737 15927125 56420623 23097659 46908022 23098510 15672524 78044618 16077829 cdd: 10363 xref: COG0492 gene: TrxB desc: Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] num: 108 18311336 52080464 56964689 47459019 78043252 81428049 29375905 23097641 20808597 15928163 46908650 23099806 15894826 73661839 18311422 42784111 29377363 73662576 70726433 70727126 18309765 28210559 15613992 57866943 15614056 42780695 78042876 57865765 52081702 15903464 16079352 22537500 52079195 31544665 24378951 23097777 15829184 12044954 22536478 15673629 15615970 23099924 54020431 15927952 55821403 42518777 20808290 15896333 16077396 56421489 16080532 42779533 15672922 76787927 56421603 31544534 78044856 56961876 16080264 24379323 56964802 50364879 70725682 42784308 15927061 42561454 58338142 76788424 25011465 52080806 57866408 42518597 28377619 15614186 81428017 56420769 56963069 58337001 15616133 58336776 73663262 28212131 25010358 13357630 13507979 15903355 26553592 26554382 29377214 15901308 15901406 52081162 19746575 15613220 56963628 15894156 15674883 19745924 52082023 46908195 46908564 28379114 23099264 71894606 55821626 23097776 81428133 15926441 cdd: 10364 xref: COG0493 gene: GltD desc: NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] num: 27 24378863 56963799 15673267 23100553 29377047 56965539 16078905 70727538 20807067 18310236 28210532 15894951 28212005 15894051 15614292 73663592 56419967 20807180 29377068 57866097 67078137 18311443 78043225 56419956 52080532 15926150 46907963 cdd: 10366 xref: COG0495 gene: LeuS desc: Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 64 55820807 56964107 15927335 13357931 50365307 15900189 22538192 39939224 29375585 78044545 15672798 81428370 16078607 13508123 55820318 12045122 15673845 56419671 22536664 58337877 70726164 42782988 19746464 28210096 20806841 56964635 57867200 15674378 15902279 73662315 28378066 42561235 78043727 16080084 15615108 56421377 23098939 25012050 42518602 46907891 42783928 19745338 15615843 52080145 31544637 76788204 24380292 76788163 25010601 15828564 54020648 52081521 46908248 23099762 47459374 29375390 73662887 15675414 24379039 18309652 26553840 15893934 81429045 57866707 cdd: 10368 xref: COG0497 gene: RecN desc: ATPase involved in DNA repair [DNA replication, recombination, and repair] num: 36 22536680 31544374 23099329 76787028 15895343 57867000 15615339 19746449 15672842 15927100 52080957 29375566 73662544 15614944 56419219 56964224 15903127 18310797 55821220 70726397 15675399 81428297 28211237 25010616 76788066 42519417 58337600 15901065 16079480 56420924 42783292 78044098 46907594 24379063 20807751 28378306 cdd: 10369 xref: COG0498 gene: ThrC desc: Threonine synthase [Amino acid transport and metabolism] num: 31 15926910 56421498 57866812 15894286 29376915 28379246 76787737 56964947 28211951 56420296 56964705 46908718 52081719 15901885 23097920 20808964 52081134 25010130 58337495 24378595 15674085 28210306 55821850 16080278 70726579 15615983 22536240 42781120 73662746 78043694 15903919 cdd: 10371 xref: COG0500 gene: SmtA desc: SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] num: 5 23098951 42781668 15900857 15902927 16077485 cdd: 10372 xref: COG0501 gene: HtpX desc: Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] num: 29 76786915 15615265 28377404 46906551 81429230 24380279 58336443 16078413 56963269 25011714 15901143 42780920 55820781 52079896 20808211 22537767 23097611 15903205 42518162 46907195 16080929 56964173 15674492 78042762 28210856 56965059 19745446 15893847 42518982 cdd: 10373 xref: COG0502 gene: BioB desc: Biotin synthase and related enzymes [Coenzyme metabolism] num: 21 28209922 16080072 57865692 20807545 78044992 42783230 20808294 15894909 28211010 22536643 56420105 70725270 15928003 76788432 15893503 18311442 25010581 52079203 18310526 15614311 78042952 cdd: 10374 xref: COG0503 gene: Apt desc: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] num: 104 23099480 73663569 54020424 28211807 15903835 58337521 18310921 70727584 16079265 25011168 29374716 28377919 42519346 15612625 22537244 15674947 15927215 16079815 56421114 76788707 15675113 56418575 81429170 52080719 52078542 24379864 71894697 58336559 15901419 28377364 42779125 23098516 24378853 15828793 70727514 25011327 42561009 73663634 15926089 76787454 19745989 13508134 15926173 57866020 52081240 46908117 46907752 57867131 15903704 15673128 15901675 31544393 56963334 81429263 19745401 28209955 15901802 15903478 28211978 15614077 42518312 15894160 12045132 29376241 78043664 25011854 15672615 81428887 18310274 15674241 57866040 18309317 15895543 42780771 73662433 58336581 55821765 23097511 70726287 20808923 56961857 22537911 42518293 22537363 26554470 42783538 19746083 20807649 55821230 56963208 15896471 16077115 47459033 15613804 15674448 13358051 50365092 28378046 18311474 46906424 76786961 28378710 55821341 29376863 cdd: 10375 xref: COG0504 gene: PyrG desc: CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] num: 41 47459243 28377375 18311190 15675707 39939097 22536292 42518309 16080768 42784513 73662067 26553504 15927701 56421924 57867610 55820232 25010181 54020334 76788516 15672473 81429241 20808954 78044367 56965644 50365463 29375723 42560688 24378619 15900408 52082249 31544391 15896145 58336574 70725909 15616354 19746815 23100462 15902482 15829137 46908730 42561420 13357844 cdd: 10376 xref: COG0505 gene: CarA desc: Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] num: 44 19745910 56964099 56964319 42782980 29376269 25011129 15673583 76786878 58337435 76788330 78042709 24379314 22537202 42519110 58337651 15674869 15895903 42519202 20807297 25011475 15615459 52080153 15926785 55820607 81428565 16078615 28377413 15615100 23098945 22537510 23098534 70726713 15901136 18311555 46908068 57866725 15903197 28378457 56419329 73662879 16078188 28379201 56419686 52079619 cdd: 10378 xref: COG0507 gene: RecD desc: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] num: 40 28378777 57867548 15675669 56963353 73662451 29377146 15900320 56421096 15927199 76787041 15896108 22537863 19746775 71894627 15902407 52081227 15673722 42518915 15829253 50365138 16079801 42783523 42561047 24380231 20806994 28210082 55821739 58337133 81428418 25011808 15894427 57867110 70726301 46907737 18311157 47458928 20808503 15613826 78044853 23099467 cdd: 10379 xref: COG0508 gene: AceF desc: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] num: 72 15614410 15615216 25010951 12045128 70725227 16078524 46907286 42560815 81428693 29376212 15926992 56419247 56964548 15903093 50364856 56964214 76787510 23099319 13508130 56420911 46907600 15612778 15615324 73663003 57866886 23098545 56964183 52080629 16077875 52080061 24379824 42783278 52079283 47459416 15614387 39939088 70726494 56419595 16079459 42783066 57865796 22537043 70726401 26553962 70726858 24378647 57866608 73662549 16078996 56963878 23098869 57866996 15672042 15901027 42781859 56419559 15614768 23100330 73662635 20807177 20806714 28378765 19746012 55821074 29375922 42780453 15926680 15613341 56421753 15675027 15927096 52080941 cdd: 10380 xref: COG0509 gene: GcvH desc: Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism] num: 27 57866398 28378930 22537217 15828912 54020456 23099843 19746150 28377227 29376992 15616046 78044435 76788503 56421539 70727052 20806816 81428726 42561062 56964750 70725267 15926026 42784176 25011144 20806618 46908596 15926486 15675181 73663178 cdd: 10381 xref: COG0510 gene: CotS desc: Predicted choline kinase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane] num: 47 15901129 15675577 73662323 15672730 76787812 42561572 15615825 42783889 25010484 15902519 28378176 16080044 15829211 55821583 50365194 26553767 46907847 26554397 15927326 57867190 15828475 18309609 56964389 13357939 52081492 70726174 54019993 15900462 19746629 23099751 12045216 31544382 71894300 13508271 22536558 29375287 47459428 71894354 54020609 28377543 81428246 56421360 15903190 24378908 18310015 56421132 56964544 cdd: 10382 xref: COG0511 gene: AccB desc: Biotin carboxyl carrier protein [Lipid metabolism] num: 69 57867081 26553962 55820480 15895557 22536533 81428431 28377470 24380110 70726313 20807677 57867017 42560815 24379455 81428841 15672758 16078996 56963878 56420135 28377277 15926992 52080514 28209903 15615351 50364856 15927108 29377345 15614768 15902427 28378366 42783304 15612778 23100330 23099341 73662464 18310054 56420935 23098545 78042895 46907582 19746120 73662635 23099152 19746704 20806714 20808747 70726389 15616503 56963273 15896806 56964234 15900342 47459416 42779626 78043991 16079491 42781611 15613696 15675154 19746114 42780453 70726494 15927187 25010411 73662536 29377766 15675148 52080968 15675596 76787890 cdd: 10383 xref: COG0512 gene: PabA desc: Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] num: 37 20808011 15673297 15675781 73663316 16077143 15901645 28378345 56961893 25010579 23097981 52078570 46908935 15612654 15926390 70726542 18309998 78044611 70727184 24379015 22536641 23098156 15926948 46907862 57866295 56418602 55821568 78045118 15903678 15673451 42779149 28377035 57866889 15896410 73662687 42780431 19746895 76786963 cdd: 10384 xref: COG0513 gene: SrmB desc: Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] num: 108 46907952 39938939 28378872 29375434 16079569 28211793 24378946 55821544 58336942 15927656 58336753 56963965 46907469 15675529 56964675 56963462 28377939 52082502 12045285 19746376 56965701 42781571 18309844 81429227 15903483 16077810 56421010 73662507 15675301 52078994 15675334 13358147 50365089 19746579 15894065 28211047 28211174 42784637 42781255 57867091 42783412 13508182 22536941 73662111 42561004 42518736 19746341 26554258 55821673 15894071 24379088 29375590 18310378 28211624 28211493 16080962 12045164 15615910 57867605 18310498 15614947 15900655 15901333 42518357 31544708 42779348 22536989 46907098 42518569 24379793 55821267 39939200 47459115 23098064 15903379 15901428 15672332 56418761 15896262 28377407 70726359 76786745 15828540 15927138 52079209 25010353 46907678 15902714 76787716 13508362 25010898 78042906 81429147 18311084 81427999 16077525 15896005 29375944 58336606 50365342 15672392 23099394 15613948 22536473 52081051 76786821 70725957 25010852 cdd: 10385 xref: COG0514 gene: RecQ desc: Superfamily II DNA helicase [DNA replication, recombination, and repair] num: 35 46908944 15673790 15895945 18309325 73663307 57866319 70727172 46907469 52080584 81428631 29376953 16079359 56963874 28377783 18310317 58337296 23100496 56963611 23099269 15614170 28211708 70726431 15927063 28211174 42781899 42519100 81429457 73662574 56420778 57866945 46908175 16078982 29376108 28378538 15926398 cdd: 10388 xref: COG0517 gene: COG0517 desc: FOG: CBS domain [General function prediction only] num: 74 76787279 18310994 78044937 52079398 56419583 52080013 46908097 46906798 42518360 73662501 56421343 57867005 15903735 52080098 15614045 81429221 78043747 78043601 29377209 15927144 18311135 15674514 81428751 23099677 42779868 22537812 56963521 55820457 56963451 15894266 56964526 22537737 56418849 16080022 28211638 78044420 52081071 42783423 15673261 58336609 19745522 16078477 15613935 28377420 16079579 24380042 20807459 15895959 15893966 56418731 76788044 15615798 52081470 56421656 23099402 56419104 15901706 28210105 16078559 42783849 70726353 23098268 18311145 25011686 15615168 56419625 15896260 16077988 29375605 42780520 15615273 25011756 52082172 56421020 cdd: 10389 xref: COG0518 gene: GuaA desc: GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] num: 39 55820926 42518314 58336584 46906756 81427749 29374817 26553576 19746136 52079121 28377744 58337344 15673468 73663631 15903343 42779372 70727581 57866023 24379503 50365158 16077703 23098171 15895957 15926092 78044956 42518612 15613170 56418789 15675169 46907321 18311257 28377035 76788259 28211997 15901295 56962710 25011007 24379652 20807079 22537128 cdd: 10390 xref: COG0519 gene: GuaA desc: GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] num: 35 55820926 42779372 42518314 58336584 70727581 57866023 81427749 24379503 50365158 16077703 23098171 29374817 26553576 31544223 15895957 78044956 15926092 19746136 52079121 56418789 15613170 28377744 15675169 46907321 18311257 28211997 76788259 56962710 15901295 25011007 15673468 73663631 20807079 15903343 22537128 cdd: 10391 xref: COG0520 gene: CsdB desc: Selenocysteine lyase [Amino acid transport and metabolism] num: 55 15902817 55820264 29376889 20809014 15616618 15616031 20809118 47458914 42519066 71894338 15673773 15828643 23099833 16077335 26554199 13508226 39938954 78044965 19745416 42561036 56421528 22536328 24379488 18311629 15895621 13358017 15896060 15926504 28378187 57866419 12045195 15896536 31544483 70727038 52081832 28211039 52081754 50365064 73663168 54020394 15828644 42784164 46908584 18310451 16080321 15900752 56420277 81428720 56965868 56964740 29377055 15674462 24378758 25010214 76788148 cdd: 10393 xref: COG0522 gene: RpsD desc: Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] num: 47 71894490 28212155 20808633 39939072 76787020 42783839 12045167 22538271 42518876 50365403 24380465 15829187 16080018 70726207 15900029 15615771 58337098 15675914 18311359 47458904 26554211 81428454 78043798 31544739 13358061 56421337 28378911 52081461 57867241 25012131 15894757 15894872 42560826 15927296 46907827 73662353 15672266 15902122 15896356 13508185 18311341 56964521 23099660 55821964 54020253 29377528 19747014 cdd: 10394 xref: COG0523 gene: COG0523 desc: Putative GTPases (G3E family) [General function prediction only] num: 9 18309020 28210651 29377652 44004503 18309019 52080316 56962891 28210652 23100888 cdd: 10396 xref: COG0525 gene: ValS desc: Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] num: 44 23099516 13508219 54020305 70726264 26553494 76786857 16079861 28211899 56964386 20807263 12045191 15902536 71894314 52081291 58337105 18310901 22536625 13357827 81428459 50365171 42783595 56421173 47458993 19746507 78044410 15828728 57867133 15895665 15674155 31544772 42518883 73662410 15615600 39938504 55820560 42560851 25010562 15900480 15675460 15927242 28378904 29377395 46907782 24380137 cdd: 10397 xref: COG0526 gene: TrxA desc: Thiol-disulfide isomerase and thioredoxins [Posttranslational modification, protein turnover, chaperones / Energy production and conversion] num: 34 16078864 15675765 24380154 15828655 15928115 15902948 52080022 15614278 28211155 67077909 15902620 15900560 70726027 56964299 16078448 70725525 19746877 28212132 55821777 23099277 29376401 16078487 56963542 56963809 56962706 55821651 15829178 78042898 56964192 15615227 73662171 52079980 15900873 24379599 cdd: 10398 xref: COG0527 gene: LysC desc: Aspartokinases [Amino acid transport and metabolism] num: 49 46907454 23099066 55820470 57866840 16079899 24380120 76787071 58337496 52081350 78044009 42780952 42782887 15614963 70726519 56419811 22536522 18310660 15895086 23099326 15615658 52080283 58337157 15900332 29375006 52078908 78044447 28210968 56963528 16077447 56421730 15672722 15614063 20807829 28211949 15926908 28377796 25010401 16078739 57866810 15926973 46907664 46908545 73662748 73662666 70726581 15902418 56963980 28378893 15893570 cdd: 10399 xref: COG0528 gene: PyrH desc: Uridylate kinase [Nucleotide transport and metabolism] num: 45 25011613 19745588 28378684 76786760 50365373 22537656 15828691 15673992 23099043 15895065 15926841 54020578 81428874 18310680 20807854 15674581 42782916 13358077 42561131 56964005 52080254 47458889 50812227 42519370 46907539 56419786 55820524 57866732 29376893 73662819 15614988 28210949 39938653 26554406 12045294 24380005 78044543 58337545 15902889 70726657 15900823 71894687 13508371 42780940 31544293 cdd: 10400 xref: COG0529 gene: CysC desc: Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] num: 16 15614052 42780620 56962388 52080163 15893406 57865550 73663710 15893399 70725421 16078624 78044915 16078155 56418949 15615947 28378116 23099116 cdd: 10401 xref: COG0530 gene: ECM27 desc: Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] num: 9 23097898 78044028 18310547 78044207 28211840 47459101 15613028 15615430 20806783 cdd: 10402 xref: COG0531 gene: PotE desc: Amino acid transporters [Amino acid transport and metabolism] num: 186 46906268 42783142 47459125 16078011 24380436 58337405 12045081 42518135 76787383 28379472 16078351 70725461 56420804 18309319 20808890 70725604 42561426 42518477 18309945 28379371 15896026 18310172 81429025 58336601 16077801 54020161 18309148 57865660 15674013 73663741 18311057 15894139 16077281 15672050 58336940 31544397 58337376 58337695 28377592 28379644 26553969 42518795 81427988 18309919 57865414 81429309 42518734 19746960 15895976 18310282 42779985 58338146 70725622 15004731 55821352 15893564 18311042 52079785 81427682 15674017 18309718 15926262 81428648 15829132 28378406 20806955 58337242 42518990 46908533 56419465 29375448 52080573 15902949 42779344 18309043 15674262 42561228 57865634 15673273 15673681 42781379 16080387 13508057 70727407 42519891 52078921 58337045 29377190 28378479 42781960 15928019 58336407 81428830 15673092 20808327 56418748 42518643 42518354 15675845 50365421 42779775 16077723 58337017 42519722 15672093 15928029 81427799 52080327 19745213 42518642 15928189 20807215 56962152 15928219 13508058 52082446 23100388 73661528 18309371 20808328 81427735 42519823 15927018 81427736 42780013 24378771 52078966 22538300 29375236 50365479 42518101 58337291 81429034 29375328 42519812 52081518 28377721 15613557 73661583 57865381 46908366 56419497 42560847 28377907 42519345 20808968 28379282 30024056 28210643 42518653 15894014 47459041 71894494 29376558 42784203 70725369 42779738 28377701 12045080 29375513 42518639 73663440 56962538 78043734 58337568 46908641 29376874 55821521 26553800 15900874 15896530 54020440 18309152 25012160 81427974 16080500 46906891 57866173 16077499 42779554 31544747 42781035 24378546 23097944 13357782 52081826 cdd: 10403 xref: COG0532 gene: InfB desc: Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] num: 44 26553565 12044994 57866759 47458987 76787439 55820437 56419798 50365111 73662808 58337534 28378673 18310668 15614976 71894696 31544319 23099053 13357880 42782901 24378914 15672749 46907551 15675571 56963993 39938636 19746623 42560893 20807840 81428859 25010490 22536564 52080270 15926852 29375843 54020614 15902525 28210961 42519359 15900468 13507894 16078726 70726646 15828676 15895078 78043976 cdd: 10404 xref: COG0533 gene: QRI7 desc: Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] num: 45 15902175 15613111 52079050 56962645 81427965 19746799 20807039 28377586 13357973 26554315 15894188 39939065 22537896 46908311 15675691 28212017 50365301 23098103 78044266 16077661 42779363 78043782 12044896 54020637 13507798 29376965 24378882 56418774 15900071 18311214 15828589 73662138 76787524 58336727 70725985 57867553 25011839 47458965 15927624 31544669 15672277 42518531 55821742 71894040 42560642 cdd: 10405 xref: COG0534 gene: NorM desc: Na+-driven multidrug efflux pump [Defense mechanisms] num: 106 28211042 28377045 26554353 15674285 76787140 54020302 28210694 81427942 15894889 15895750 15674084 28378120 18309846 52079585 28211443 81428925 73663449 46908078 15896540 55820983 16079004 15829209 18309812 16079230 46906227 15615498 25010131 15613713 15613449 15896597 28563918 28210172 78045098 15903918 16078145 28210337 42780379 24378596 18311517 15613423 20808228 39939220 18310181 13358149 70725678 15672149 18309327 15894170 15926036 23100518 15901031 29375259 39938766 39938768 15894134 31544356 15896685 42780916 28210196 24378641 42780575 12045306 52080635 42780806 15901763 18310441 20806776 56420124 13508400 18310466 55821344 31544359 18310630 56963018 13358148 15673466 15828764 15903096 46906850 18310258 52080896 28211993 18311487 24379896 46908322 22536241 15901884 31544433 16078898 46908911 46907222 58337834 15616607 55821849 56419236 52080678 15903798 18309821 56962238 19745239 76787136 22537380 52081169 15614726 26553543 25011345 cdd: 10406 xref: COG0535 gene: COG0535 desc: Predicted Fe-S oxidoreductases [General function prediction only] num: 36 56962276 55820959 56419300 20808195 78044984 16080789 15896046 50812176 52080450 16081069 70726083 78043029 15896051 24379898 15004839 15674141 52079259 15674140 28210029 15613452 15896050 23097891 20807606 57867326 78044427 42779617 15894613 73662225 42784642 28210563 78044212 56418960 15927451 20807610 56963064 78043007 cdd: 10407 xref: COG0536 gene: Obg desc: Predicted GTPase [General function prediction only] num: 44 12045245 57867155 55821480 29376092 71894190 54019994 15927224 13358024 23099497 42783578 20807398 78042851 15613776 46907765 15900948 42518996 15828824 50365339 31544654 25011579 15673569 76787450 15894542 15903028 28211676 58337245 52081272 70726278 47459257 22537613 56421141 13508302 19746308 81428656 18311109 28378716 42560974 24379258 73662424 16079844 15675273 26553646 39938575 56963307 cdd: 10408 xref: COG0537 gene: Hit desc: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] num: 34 76788284 15927412 15675580 15674318 25010431 56965578 15673948 71894195 73662270 15894886 19746632 58337349 56962601 42519160 15900535 70726125 15615306 42779791 24378845 15902502 42780226 19745274 81428243 28379251 15902597 57867304 15900435 28379675 42781870 25011862 56419192 76787274 22536553 15828479 cdd: 10409 xref: COG0538 gene: Icd desc: Isocitrate dehydrogenases [Energy production and conversion] num: 16 23099622 57867183 16079965 52081414 56421270 15927272 15615721 56964479 20806899 55821271 73662381 42783770 46907797 15672654 70726232 24379145 cdd: 10410 xref: COG0539 gene: RpsA desc: Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] num: 35 42780699 28210997 46908171 22537308 81428628 15672820 15614199 56963639 20807800 20808441 18311132 15900746 15895236 78043962 57867003 15895122 15927057 56420760 76786829 52080799 16079345 15674934 58337265 28378535 28211189 55820671 42519016 24379626 19745977 23099255 15902808 29376111 25011274 70726436 73662579 cdd: 10411 xref: COG0540 gene: PyrB desc: Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] num: 33 57866723 15674868 16078613 15673584 22537203 28379203 42782982 15615102 76788072 20807970 18310165 26554244 25011130 23098943 28211976 15895912 70726715 29376271 52080151 19745909 15926783 55820606 15903198 58337653 24379313 46908070 81428563 15901137 56419684 73662881 42519204 78042712 56964101 cdd: 10412 xref: COG0541 gene: Ffh desc: Signal recognition particle GTPase [Intracellular trafficking and secretion] num: 48 71894046 23098986 15615047 15828813 15926818 24379497 20807909 70726678 56419731 15895031 47459362 18310695 15675165 73662841 13357648 42519388 25011071 15926820 28210935 31544492 39939164 54020010 76787075 46908034 70726680 57866688 81428329 42782937 13507800 26553705 46908032 52080200 50365296 15673598 15901147 29376252 73662843 22537142 78042676 28378333 55820929 42560958 58337566 56964059 15903209 16078661 12044898 19746132 cdd: 10413 xref: COG0542 gene: ClpA desc: ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] num: 98 12045215 15675834 15672624 15614742 57866102 28378553 31544696 29375303 58336622 76787079 56419334 24380371 52079919 29376856 81427817 23098336 42519824 54020123 46906465 70727483 58336963 19746949 42518740 28377823 15673507 42779162 15895100 15612666 15896437 24379042 73663540 15900708 28210275 58338154 56965211 18310410 16078434 19746461 25011418 15926564 22537450 25011908 70726976 15904041 28212201 55820681 56418613 16077154 15900269 15894191 73663109 52078581 24379828 20808693 15902769 76788075 15902001 56961903 47459200 28209835 15926202 76787618 46907229 18311423 22537967 15675411 19745956 25010604 81428651 15894246 55820179 56419503 13508270 42561142 22536667 46908440 15674913 26553830 50365236 81429391 13357952 15902351 23097548 81429074 28378034 28379892 15672539 29377725 25010461 25011044 78043878 25010773 42780361 15928127 42518421 24379399 57866505 55821590 cdd: 10414 xref: COG0543 gene: UbiB desc: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] num: 39 28211060 15900840 15895909 52080155 18310237 28210640 23098947 15615098 26554242 15895135 29377048 16078617 81428567 56420272 78043852 28212067 18310519 56419688 20807066 58337403 15902909 78045020 24379648 15673329 18310161 46908066 28212006 28211972 18310421 20807181 78043750 20807778 29376267 42782978 56964097 15894792 20807967 18310782 55820989 cdd: 10415 xref: COG0544 gene: Tig desc: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones] num: 44 15675709 28211968 55820230 19746817 70726251 71894613 12045093 50365223 29375311 54020400 58337153 15895899 22536290 42560988 15672533 73662398 57867150 15615615 46907493 15902406 15828680 42783610 28378739 16079875 13508070 47458920 18310376 76788439 56421188 81428672 13357907 42518936 25010179 23099533 20807118 26554146 24378614 56964402 52081306 15900319 78044834 31544577 39938935 15927254 cdd: 10417 xref: COG0546 gene: Gph desc: Predicted phosphatases [General function prediction only] num: 67 78043874 18310959 56964816 29376974 15902758 15926250 15612993 42784311 46908653 13357672 16080550 46908916 20808593 22536868 15927302 24379675 22536795 29377380 81427638 28378626 15901883 76787445 15673735 42781953 23099934 24379697 28379855 22536970 15902137 55821498 57867251 76788246 20807250 25010880 81428353 55820979 28377710 15926233 70727436 15893709 57866166 42781314 70727652 73663469 57866144 76787377 52082037 28378579 15895761 15900047 25010666 73662347 67078136 15672886 56421614 42779434 15616149 23099168 15900698 25010732 70726200 42781326 15903917 18309127 15674781 24379119 19745823 cdd: 10418 xref: COG0547 gene: TrpD desc: Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] num: 22 70726541 78044554 15901644 52081744 52080775 42780432 55821567 56420738 15896409 28378346 15903677 56963661 50812260 30024045 15926949 46907861 73662686 20808010 15614223 57866890 23097980 24379016 cdd: 10419 xref: COG0548 gene: ArgB desc: Acetylglutamate kinase [Amino acid transport and metabolism] num: 19 46907820 73661532 28377382 28377416 15672782 52079617 56964321 20808851 15895655 57867028 16078186 56419327 78043383 15615461 55820549 15925886 23098532 24379138 42783247 cdd: 10420 xref: COG0549 gene: ArcC desc: Carbamate kinase [Amino acid transport and metabolism] num: 36 19746489 25012119 15674016 29377062 29374757 15928218 26554062 42561396 57865703 20807034 52079541 15901963 81427685 29375023 25012161 81427986 15675439 22538259 42561383 76787352 52082447 42561226 76788316 22538301 46906270 15673678 15926753 28212103 15903999 15674015 24378773 70725260 29375330 18309153 13508046 42779555 cdd: 10421 xref: COG0550 gene: TopA desc: Topoisomerase IA [DNA replication, recombination, and repair] num: 76 28211475 10957138 15896200 52078961 26553866 16078675 71894542 81428600 29376204 42779565 58337278 55820937 42782925 76788636 12044974 18310684 28378508 22537165 31544838 42561447 15903184 78042828 24379442 46907502 46908943 50365469 29376814 70725799 52080214 25010460 15675140 15926833 15615949 10956466 15615030 70726665 47458917 18310490 25010772 18310965 73661968 15927834 15896801 73662827 42781053 15081527 23100045 25011045 15901123 54020038 28210945 13508000 15673212 29376573 81428375 56419746 19746110 39938765 56420350 56420223 25011094 15895061 56965711 57866716 56899941 57867728 42519034 56964043 23099001 33416249 13358155 56963884 15828942 16077493 28210156 20807896 cdd: 10422 xref: COG0551 gene: TopA desc: Zn-finger domain associated with topoisomerase type I [DNA replication, recombination, and repair] num: 52 15896200 52078961 26553866 16078675 81428600 29376204 42779565 58337278 55820937 42782925 76788636 12044974 28378508 22537165 31544838 15903184 78042828 24379442 46907502 46908943 70725799 52080214 15675140 15926833 15615030 70726665 18310490 73661968 15927834 73662827 23100045 15901123 28210945 13508000 15673212 29376573 81428375 56419746 19746110 39938765 56420223 25011094 56965711 57866716 57867728 42519034 56964043 23099001 13358155 16077493 28210156 20807896 cdd: 10423 xref: COG0552 gene: FtsY desc: Signal recognition particle GTPase [Intracellular trafficking and secretion] num: 45 15672795 15903166 22536891 15829145 15926818 71894168 31544375 50365053 52080198 42561024 16078658 57866686 81428324 25010804 15674659 28210933 54019977 20807911 55821418 47458973 76788040 15901105 46908034 29377551 24379207 70726680 42519391 78043121 13507800 12045153 19745687 58337571 39939165 28378331 73662843 56419729 15895029 18310697 13508164 23098984 13357698 26553936 15615049 42782939 56964061 cdd: 10424 xref: COG0553 gene: HepA desc: Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] num: 44 26554357 42780097 15903418 23099360 15615380 47459148 42780946 22537758 29374969 15674499 56964261 16080681 18450310 56420961 23099744 18310607 46907873 19745454 56421797 16079514 13507759 42779467 15901369 15896682 76787127 29377168 52080994 15615476 23100530 31544906 15896547 25011706 76788487 15674024 15896248 55820334 42784409 24380105 28211487 12044868 42783352 15613532 56964329 52082146 cdd: 10425 xref: COG0554 gene: GlpK desc: Glycerol kinase [Energy production and conversion] num: 43 28377679 19746596 31544219 70726610 28212046 15901993 13507789 15904032 15894601 25010337 16077994 54020480 78044255 15673228 76788048 58337757 56963028 47459129 15613656 46907766 28211408 42519193 12044888 81428264 29376456 42780201 18311534 28377285 42560806 23099930 52079407 22536457 46907266 57866820 15828692 58338124 15675545 15926883 56419895 20808405 56965146 73662769 26554088 cdd: 10426 xref: COG0555 gene: CysU desc: ABC-type sulfate transport system, permease component [Posttranslational modification, protein turnover, chaperones] num: 10 42780272 52079097 42560775 56965260 56965044 15893572 15616243 15615690 56962999 18309560 cdd: 10427 xref: COG0556 gene: UvrB desc: Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] num: 44 58337009 15675262 29375355 42518788 19746295 15901100 13507950 46908661 15672544 13357677 55821473 54020288 42784318 23099943 15616157 12044925 57866394 73663268 56421621 26554342 15893793 15926435 28212086 47459407 15828567 28377628 31544242 24379265 81428136 15903161 76787746 71894082 39938918 78043646 18309285 22537607 50364873 70727132 56964823 52082051 25011573 16080570 20808375 42561460 cdd: 10428 xref: COG0557 gene: VacB desc: Exoribonuclease R [Transcription] num: 44 23099883 19745621 28210140 15828822 52081942 29377102 12044956 15902922 16080414 57866444 26553786 55820704 58336785 15616115 76787265 78044313 13507982 15926457 47459100 15674608 24379988 15894003 71894317 54020321 18310278 15673187 22537625 56964768 15672924 25011590 50365025 13357613 56421579 46908622 42561375 42784278 31544662 42518802 81429021 73663216 28377650 70727106 15900852 20807463 cdd: 10429 xref: COG0558 gene: PgsA desc: Phosphatidylglycerophosphate synthase [Lipid metabolism] num: 48 81428100 15895316 28210973 47459192 13357924 31544444 15614949 46907624 22538286 76787682 39939204 20807242 28209888 56963967 50365478 57866781 24380479 18310656 58336987 42518763 23099077 15926866 15675929 56419828 12044966 52080297 18309563 15904068 42561429 15673952 19747028 73662791 70726631 15828639 29377600 15895090 28378889 71894506 55821977 25012146 42782866 20807823 54020040 26553857 13507992 15902026 15896830 16078755 cdd: 10430 xref: COG0559 gene: LivH desc: Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] num: 17 78044461 42782069 56420471 42781082 76786749 56421560 24380046 55820453 56420195 28379419 15902704 56421514 25011671 22537721 15612813 23098138 15900645 cdd: 10431 xref: COG0560 gene: SerB desc: Phosphoserine phosphatase [Amino acid transport and metabolism] num: 13 25010669 24379690 28210677 55821495 15672587 28211390 15895495 18311038 18310154 15893555 76786917 15903077 22536798 cdd: 10432 xref: COG0561 gene: Cof desc: Predicted hydrolases of the HAD superfamily [General function prediction only] num: 322 76787344 28376998 81428956 15902868 15926560 16078118 18310294 46907261 57865496 81429036 73663464 15893917 23100054 42783166 47458976 71894068 42561346 22536889 55821419 54020215 31544456 42519657 24380192 16080682 15828609 15674658 73663720 76788674 24379601 56964913 28377306 26554467 28210122 24378899 15672793 76787088 56419176 15615469 19746546 57866814 50365298 71894628 23100202 56420594 15613409 13508003 23100582 71894690 42519457 25010858 22536506 29375531 18310551 15903168 15894712 29377525 39938657 20806983 58336891 50365430 28212036 47459302 39939120 29375828 70726979 25010497 76787047 42519210 42560790 15829015 23098649 15615222 58338192 76788165 58336930 15673714 19746608 81429247 15927733 15828715 22536947 15901820 22537818 13508120 46908748 25010803 50364985 28377656 42518820 28379128 29377552 15675621 55821022 56419591 73662041 58337036 15674125 42784570 25012072 54020476 56419282 47458882 52082231 42783071 70725883 28379247 15672053 22537263 55820706 15829020 73663740 42781227 73662744 81427939 15672552 73661585 15615255 42518629 24378992 46906513 26553772 52082124 24379541 50365495 78043283 28379365 28378530 15673639 15672719 22536890 46908877 28377304 81429166 42518807 23100113 24379186 46906261 58336402 12045121 12044977 16080638 15926912 31544752 54020531 58336602 31544824 81428829 47458957 42782835 57866905 29375041 23099991 15926237 15896286 58336920 15928104 26553537 42780359 76787428 42518627 16081006 56963853 28377370 42560632 23100264 18309506 57866123 46906913 55821165 42561143 25011762 26554310 18309802 13508166 19745723 73663112 71894057 15901151 15903213 15673057 55820428 29375718 57866502 42561316 28379614 42781522 25010802 15902307 15613714 25011249 42519486 19746694 15674657 24379205 19745685 52082147 15901106 25010385 76787135 26553971 22536571 76787852 15896194 15927784 70726531 47458881 50812207 28379271 12045119 52082539 25011223 71894515 18309595 52079612 46906517 71894575 56964211 15614309 22536545 16078519 28379848 15613060 15893986 24378973 25010423 70727432 22538214 15895512 70726577 24378920 50365320 73661687 81428509 26553947 42519589 19746729 42561573 57867658 13508122 24379206 58337240 18309390 55821420 71894676 16078178 22536690 18309705 19745686 56963285 31544753 15893812 15675557 58337632 42779334 81427938 46906394 56964325 31544475 28378095 25010626 15675586 54020336 18309591 42560640 15926957 42781720 15900220 28210544 15903349 15672226 15674695 13357732 76787060 46906657 13358134 46908496 55820580 54020380 29375618 15004774 15901301 56965720 55821021 56963793 42784140 58337037 15672874 15903853 42519750 55820315 15903436 16077472 42783180 70725545 39939079 42561328 81429487 15903167 47458880 52080055 42780036 28211836 15900803 15901382 46908529 52078942 55821695 50365330 55821096 26553909 28377673 15895689 76788551 20808185 15828772 54020506 15901107 46908442 58337023 52079471 22537291 28378407 cdd: 10433 xref: COG0562 gene: Glf desc: UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] num: 13 12044989 13508017 47459255 42561486 58337983 42518958 56421851 28377990 42561493 29376979 15895438 42561500 28377950 cdd: 10434 xref: COG0563 gene: Adk desc: Adenylate kinase and related kinases [Nucleotide transport and metabolism] num: 23 23098537 55821912 23098697 76786794 42781884 15902783 24379969 25012039 22538180 15613577 58337428 15675784 15672670 46907640 15671993 19746898 23098695 56962068 70725452 15895746 16079690 46907431 15900724 cdd: 10435 xref: COG0564 gene: RluA desc: Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] num: 114 81429051 16077986 15674865 52079665 12045231 78044542 57866557 23098304 58337436 73663086 18311104 56964283 81428560 15894302 55821440 81428927 15672980 15903050 55820309 50365380 52080148 47459310 24379482 28377784 22537512 76786717 20807974 50365205 25012059 58336973 19746076 12045061 28210692 16078227 15900809 19746943 50812225 15901834 24380298 15895383 15675829 31544413 70726718 39938617 73662884 58337856 42519556 15903866 54020208 56419366 28211672 15927424 25011477 31544701 28378819 56964104 52079396 13357873 71894605 15902874 15828588 54019984 15615105 56419681 15672346 15615410 22538202 78044742 71894118 28378455 28379165 55820603 23098677 18310832 42561113 24379309 20808199 19745906 22537251 70726113 47459161 46908477 26553465 76787983 42561291 42782985 57866712 26553585 56419100 25011211 15894548 13508287 13508031 18310186 15926780 23098941 70726951 76787790 42780479 57867268 15675107 15926596 28211276 81428235 15900967 15674094 42780396 15828769 46907201 42518750 13357670 73662254 42519111 46908075 cdd: 10437 xref: COG0566 gene: SpoU desc: rRNA methylases [Translation, ribosomal structure and biogenesis] num: 87 22537746 78042655 56964446 39938630 28212189 31544702 46906474 81429291 25010279 20808679 15615674 73662967 71894580 28377488 20808975 15926721 15901307 39938738 15612676 73663533 70726825 52078591 15672589 13357887 50364903 50365074 29374705 57866117 42561476 23099587 54020405 56421995 42783734 47458955 76787268 56418622 81428990 76788278 70727476 71894373 15675741 55820344 16079917 42561043 13508094 46907437 42779172 56961913 28211878 29376897 22536393 18310871 20808116 56421244 26553475 24378679 15896402 19746851 24380097 16077164 31544882 25011695 23097556 42518495 58337786 15903354 28378262 12045106 19745515 15828649 47458982 15674507 52081372 13357681 15926209 58336688 15673854 57866640 15903830 54020641 18311406 78044128 15901796 15895625 42519503 15828775 55820190 cdd: 10438 xref: COG0567 gene: SucA desc: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] num: 11 52080630 56419558 73662634 70726493 50812247 42780454 56963879 57866887 15614769 15926993 23098544 cdd: 10439 xref: COG0568 gene: RpoD desc: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] num: 53 71894468 42519241 42783418 19745866 39939114 13357909 47459124 25011538 73662504 15894966 52081067 29376087 28210583 15672535 18310744 56963455 15828925 12045103 50365086 70726356 18310989 42561001 15613939 15894582 23099399 58337478 76788342 20808499 16079575 67078088 15903023 46907682 15674827 56421017 81428494 31544593 13508091 57867102 54020013 78044024 26554290 15895322 55821465 56419781 15900942 28211847 24379277 22537572 28211633 56961915 28378605 15927141 20808174 cdd: 10440 xref: COG0569 gene: TrkA desc: K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] num: 68 16080161 28210003 47459262 15615226 28211879 15900395 46907255 81427744 56962065 22537771 70726949 71894529 52079667 42518245 56419587 28378783 18310872 70726868 52081584 42561285 73663084 76787137 24379947 15828608 29377374 78044977 20806723 15674488 42779846 24380082 12045180 23099117 58337294 16078229 15902115 52080051 15613030 55820362 23099789 42783074 54020584 15613160 57866593 55820408 56964191 15615902 23098862 73663012 19745442 22537730 57866559 15902471 25011679 50364980 24379946 15926674 13508200 56421457 23100733 26553755 25011718 16078515 28377734 58336523 15926598 31544636 15900024 76786776 cdd: 10441 xref: COG0571 gene: Rnc desc: dsRNA-specific ribonuclease [Transcription] num: 44 46908036 15828634 71894685 19745653 42782941 12045228 50365047 15895025 28210930 24379904 47459246 28378329 56964064 73662845 76788414 29377554 57866684 78044311 42519393 18310700 15615052 15901109 23098981 16078656 20807916 22536887 56419727 39939094 58337573 70726682 55821300 81428322 15903170 15926816 52080196 26553818 15674631 25010800 54020492 13357763 13508284 31544697 42561014 15672784 cdd: 10442 xref: COG0572 gene: Udk desc: Uridine kinase [Nucleotide transport and metabolism] num: 46 46907725 81428984 15893960 50365122 28210102 15613838 15927191 56963165 19746340 15903133 42561085 73662459 20808197 13508300 42783508 23099458 42518685 12045243 22536990 56418714 29375413 56963363 57867094 42782101 24379791 15675300 18310329 18310752 13357892 58336904 52081214 25010899 76788122 31544652 56421083 15673642 15902230 16079787 15612883 39938628 42781619 70726309 15901071 28378268 55821266 28210766 cdd: 10443 xref: COG0573 gene: PstC desc: ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] num: 47 22537151 57866924 28210827 26554385 78044059 42561021 81428116 15901253 70726524 46908670 56420997 15675204 25011990 50365050 13508349 22538101 52081034 42779862 28377606 15926968 76788397 23100590 76787299 15673701 16079553 47458844 58336700 31544244 25011080 18309620 19746173 42783397 29376307 15903299 24379568 56964355 73662671 20808057 56421972 12045273 15894983 42518715 15615555 15903937 15901901 13357757 55821035 cdd: 10444 xref: COG0574 gene: PpsA desc: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] num: 24 42782192 15894088 73661489 28378561 18310993 20807461 52080542 57865517 22537810 16080572 15893824 76788644 52079071 70725442 15894084 28211637 46908099 25011754 81428750 78044221 52080611 46906648 16078943 29375604 cdd: 10445 xref: COG0575 gene: CdsA desc: CDP-diglyceride synthetase [Lipid metabolism] num: 27 39938655 12045296 15902285 13358075 28210952 76787485 15675762 20807850 31544295 15674111 15828945 19746874 22538053 29376986 71894030 25011941 46907542 13508376 15900196 15895068 26554403 28378681 55820296 54020576 56964002 18310677 47458891 cdd: 10446 xref: COG0576 gene: GrpE desc: Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones] num: 9 71894367 15900430 15893762 18309229 13357968 28378661 47458947 15828614 81428848 cdd: 10447 xref: COG0577 gene: SalY desc: ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms] num: 17 76787036 22537506 24379318 15674873 46906427 78043327 29377448 16078501 19746917 25011471 15616236 23097618 50812292 15675805 15893612 19745914 15893365 cdd: 10448 xref: COG0578 gene: GlpA desc: Glycerol-3-phosphate dehydrogenase [Energy production and conversion] num: 25 25010338 56963029 22536458 15613658 76788279 28377286 16077995 19746595 56963263 57866821 29376455 15926884 70726609 56420688 73662768 15675544 81428265 15901992 15673227 52079408 15904031 42780202 78043719 46907519 23099926 cdd: 10449 xref: COG0579 gene: COG0579 desc: Predicted dehydrogenase [General function prediction only] num: 19 15828735 15893310 56420541 54020618 28212021 47459130 42560807 31544220 15894602 28211451 18309391 26554089 12044889 13507790 20808404 28209856 18308994 18311533 56965793 cdd: 10451 xref: COG0581 gene: PstA desc: ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] num: 59 16079552 23100589 42518716 19746459 26554385 15675409 70727047 56964354 25011989 81428117 42783396 25011079 57866923 42561021 19746172 15926967 58336701 15894984 24379047 76786906 73663174 50365050 46908669 52081033 28378733 13508349 73662734 29376306 78045006 15673700 15675203 15673701 70726525 47458844 55820684 28377607 42779863 31544244 73662672 18309621 22538100 56420996 20808056 55821036 56421973 24379567 15901252 55820257 15615554 56964796 12045273 28210828 15903298 22537150 28378310 76787264 13357757 15903938 15901902 cdd: 10453 xref: COG0583 gene: LysR desc: Transcriptional regulator [Transcription] num: 221 81427836 57865640 28378374 42519338 28377903 15896604 81428194 56965197 76788522 15894055 56421570 42782546 58337414 78043535 42782752 42784326 42779390 56962171 55820535 29375245 18309715 76787548 16079992 16080452 52079029 73661880 20807467 16080344 18310457 15894760 52082138 70725045 73663619 15926148 19746558 22536856 46908379 15902872 73663475 28379612 52081196 78042746 52078770 29376359 15673858 70725515 46908522 29375870 28210900 58337681 78042769 70727220 23100636 42782562 15896592 15927912 25011298 81428583 16080655 81428054 58336791 56965162 24378653 56962714 25010721 16080939 16078903 15894032 23100862 25011479 16078907 70725355 46907965 15894333 16079716 46907242 42781531 28210153 22537514 42780881 73661639 16080817 46906734 46906738 28379337 28209924 57865633 52081519 57865557 56962401 56965424 42781069 24379375 58337346 19745904 58337512 15928121 15614680 16077386 56965472 56962992 28379389 42779307 42519098 15900807 56965153 15675509 15894866 46908467 56419426 15672313 15674863 73661476 28378514 24380397 55820914 52078873 56419965 28377020 70725440 29376210 42519044 28379818 15896705 46906664 16080882 28378024 42781526 15900577 56965800 16077430 15895660 15893321 28377132 15895948 73661507 15613402 15672356 15615275 57866096 42784380 28378585 28379811 22537334 55820601 28377774 15614350 73663594 15614665 46906536 78044734 28379286 52079705 42782219 76788552 58337319 58337365 16081119 29375871 42519104 78044765 52081814 15616487 28378499 15902637 25011623 16079740 57866252 52080014 29375507 19745963 78044831 15896603 81428924 16078936 15893389 15926565 28210869 15673288 42518136 15673218 56963568 19745310 15672359 70727540 73663494 57866098 42783078 42781084 28379533 28379452 15896650 20806611 16080669 28378149 52078690 42783833 16079720 29377422 22537667 52080534 76788234 15672854 16078478 15674920 16078008 23099725 24379307 28379191 56965027 23100328 29376262 56964953 28379589 58336414 56419943 23098952 73663359 28377904 28379313 24379649 cdd: 10454 xref: COG0584 gene: UgpQ desc: Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] num: 75 46907518 15616262 28379112 81428041 29376432 73662351 73662976 47459040 70726204 15614339 15672046 29165616 28378922 15925931 15893721 56963205 56962131 57865870 18310859 57866472 56962143 13508305 20807473 57866616 70726833 54020140 52082437 29376671 24379785 57867242 15613643 15926705 42779736 70726992 70725090 15673979 24379192 73663125 58336769 42519795 15902941 18309403 52079446 15926548 42781761 42784548 42518881 26554027 81427856 58336448 15927298 15900869 23100288 52079958 13508159 15828734 56420920 16077282 12045247 56963259 15672199 73661479 42782565 29375370 42518590 46906861 23099310 81428198 28210180 28378282 16079474 52082535 15004719 42783287 28378076 cdd: 10456 xref: COG0586 gene: DedA desc: Uncharacterized membrane-associated protein [Function unknown] num: 52 46906273 28378832 58336775 22536852 57865491 25010717 58337243 18309314 15928092 76788102 70725561 42784216 42779978 16078407 42781928 73663337 56962505 15614765 42781183 42779610 28377739 18310475 81428048 24380268 46907728 56421068 16079625 52081650 52079687 56418756 16078880 18310474 73661709 56418725 20808260 52079890 67078050 18309437 56419108 23099862 15673772 15673740 15895913 16077297 15614620 42518596 42518993 20806797 15672695 42784028 46908102 78044309 cdd: 10457 xref: COG0587 gene: DnaE desc: DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] num: 48 12045116 42783781 26553651 42519003 15902839 81428645 13357977 31544436 15675237 13508117 15829190 70726223 15894506 15672478 16079093 73662373 28378550 58337253 39939077 56964489 50365400 56421279 18309342 78044029 57867208 47459322 15893807 16079975 24379620 15927280 22537100 52081424 23099632 19746207 42561210 29375623 28212073 55821207 78044608 15900778 71894540 15615731 20808235 54020612 25010983 57867460 46907805 76788136 cdd: 10458 xref: COG0588 gene: GpmA desc: Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] num: 28 42518474 15927994 81427816 42782815 28379560 58336527 19746384 29374841 15903542 57865362 15901490 24379074 42781582 15672318 73661792 15895998 70725637 20808842 46908439 58336679 42518250 81427713 55821213 15675343 25010839 28377477 22536928 76787711 cdd: 10459 xref: COG0589 gene: UspA desc: Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] num: 19 15927287 28379164 28378390 81428783 70726216 46908852 56964964 15675620 19746728 73662365 25011761 22537817 57867222 81427653 76787297 28378071 46906760 29377494 15674218 cdd: 10460 xref: COG0590 gene: CumB desc: Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis] num: 36 28209851 25010509 58336712 15612596 24378807 42518517 16078382 16077086 81427949 29376713 55821816 52079816 73663465 70727433 15899968 46908898 15672703 18309013 28377565 20806575 19745357 56961816 15926236 50365494 56418551 23097481 39938589 78043781 42779100 15893419 52078513 15902066 22536583 56965577 76788440 57866115 cdd: 10461 xref: COG0591 gene: PutP desc: Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] num: 41 73661708 71894213 56421987 18309168 52082347 23100232 23098119 15927476 73662198 56963250 57867374 42780427 70726051 56965682 78045189 52078826 15926016 23099697 42779855 28379873 56420674 56965293 16079016 15615269 15901182 73661685 16078109 52081592 56962320 81429254 23098806 23098809 15613223 42561091 23100283 16077391 52080648 70725284 52079161 42782723 16077734 cdd: 10463 xref: COG0593 gene: DnaA desc: ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] num: 31 39938487 58336355 46906225 18308983 15612564 15893299 24378533 13357559 19745202 15674251 22536186 26553453 31544207 42518085 29374662 55820104 15671983 13508425 15828472 25010076 54019970 76787564 15902045 28376975 47458836 71894026 78042923 23097456 42779082 15899950 20806543 cdd: 10464 xref: COG0594 gene: RnpA desc: RNase P protein component [Translation, ribosomal structure and biogenesis] num: 35 70727676 58338217 56965877 29377773 47459466 52082651 13358168 23100950 15672110 15674428 55821783 42784683 46909043 73663754 15928298 56422032 57865941 25010516 15616627 76788039 42519905 81429495 71894610 19745379 18311641 15901863 28379982 22536591 39938734 24378834 15828624 78045102 15896969 50365497 15903895 cdd: 10465 xref: COG0595 gene: COG0595 desc: Predicted hydrolase of the metallo-beta-lactamase superfamily [General function prediction only] num: 86 42782883 56419588 70726864 81428675 56963978 54020126 13358135 39939119 29375760 15673600 19746006 57866765 50365387 25011308 58337900 46907662 25011843 29377368 13358072 15926675 12045283 39939123 73662799 42518933 28210760 42519667 15675695 50364907 70726639 15829175 29377388 16078517 56419813 56964190 58337136 26553981 24379843 31544287 47459453 22537344 52080285 46907259 19746803 52080053 78043054 28378771 15900521 15614961 15615225 54019978 42783073 28378742 22537900 57866594 47459456 16078741 55821196 18310757 15675021 15829176 15902582 76787057 15902169 15900063 71894553 24378865 73663010 13508019 71894657 42518917 26554392 76787188 13508360 31544224 42780804 42561197 20807702 12044991 81428702 42560848 15894960 58337150 15926858 23098863 55821746 15672272 cdd: 10466 xref: COG0596 gene: MhpC desc: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] num: 179 42560675 23098094 16077925 42518140 28378449 73663413 16080194 70726919 24379749 70725572 42519149 31544822 56963015 42782360 42518187 78045038 23098500 15614842 31544416 13508212 42780248 42784089 23098380 15613326 23099779 29375607 70727282 42518825 57866510 13357577 52081567 76787705 12045166 46908345 23098719 22536845 12045203 57866258 58337216 16077611 76788632 15895737 15672712 42783535 15928160 28377046 58337916 15672802 52082472 56963158 56962066 20807053 25010636 28377695 24379798 25012126 16080133 31544537 23098445 56963739 71894397 46908626 26553844 57866262 15900671 42782396 42782256 28379370 56965198 12045185 42783975 42783232 70727285 52081636 15895946 26554379 56963913 42784060 20807057 52081680 67077998 67078005 42782829 28377909 42561063 28211792 56962892 16077434 15926631 42783851 56962533 47458901 42561116 56421409 76787021 55821264 15004836 46907905 22536846 73663208 73663416 54020107 15828508 58336439 57865471 16077295 15616470 20807469 42781107 15615282 13508184 42781828 18311213 15616367 15828506 22536847 16077182 15896189 42781311 76788344 15902728 16078154 42781028 56965484 15894103 42561064 46906991 42782213 16079744 23100799 52080605 28377071 16077268 81427743 15926293 16080463 22538266 15900567 73663056 24379467 42781752 42781511 20808897 42783217 42560910 42781620 76787936 47459035 15828504 15828509 42782282 16077695 46908856 71894085 15926290 42781780 28210843 26553998 24379699 13508258 15828507 56419524 73663203 42783476 42781484 16079440 16077395 18309414 58337352 22536699 15004800 26554287 29375080 15896673 16080417 54020047 58338197 56421633 42780196 cdd: 10467 xref: COG0597 gene: LspA desc: Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] num: 27 19745905 15674864 28378454 29376274 15895384 78043389 15902873 55820602 15672979 71894568 13357874 15900808 15829139 54020317 42561114 25011478 58337437 81428559 20807975 76787896 28211277 22537513 50365206 26553586 18311226 56419680 24379308 cdd: 10468 xref: COG0598 gene: CorA desc: Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] num: 55 46906804 56419572 18311439 52079264 15673465 25011795 57865357 55821545 81427652 42781185 76788252 70725712 70725673 76786967 15902214 70725506 18309987 25010565 15895127 15675654 56420119 73661822 28379099 55821721 58337898 78044034 42518094 42782221 42518119 56420102 24380213 15901583 29375568 22536627 57865418 42783199 19746760 46906894 19746504 22537038 15893586 15903638 76787950 25010946 15672645 22537850 16077867 81428091 15927927 15672967 46907292 15927956 73661864 28378808 15900122 cdd: 10469 xref: COG0599 gene: COG0599 desc: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown] num: 23 76787526 16080324 15673958 46906911 15616035 24379153 73661508 22536608 20806820 15673518 56963773 56421531 25010533 81428802 28379322 42781915 52081759 26553639 23100234 56964744 58336797 42781087 42519639 cdd: 10470 xref: COG0600 gene: TauC desc: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] num: 36 70726105 56421392 56965509 52081548 15904045 15893404 15828882 42782116 23099773 20807134 15925878 56965478 52079353 24379126 56965009 15615244 29375450 42782015 18310468 42779874 28210159 15893906 15894678 56962376 56965506 73661766 15902005 56964647 15925844 56965155 42779571 28211070 16077950 15613773 16080114 42783983 cdd: 10471 xref: COG0601 gene: DppB desc: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] num: 119 20806588 18311254 42779804 15925910 56962015 78044226 56961813 57865745 42781362 20806868 58336541 13507954 52079636 15903236 23100425 15614360 15674466 52079642 15926962 15895642 28378028 15616200 56965823 16078358 15828754 56964178 78044890 15672327 26554331 39938942 16078204 29377564 15896428 15828881 23100523 25010260 20807107 15926583 15903748 56963013 31544724 76787793 15928045 23100068 22537660 15896877 58337579 15901717 76788112 73663103 46906509 15896865 42561481 23099716 15926575 56962341 12044929 19745422 46908429 20808877 56418712 54020378 55821427 24378764 56963374 15893470 70725149 19746903 29375493 52079328 15616205 73661577 54020551 15612911 56965422 20806748 52079791 16078209 15612592 28211535 25010220 42780375 20808319 57866918 42781486 22536334 42560732 22536372 71894363 15613131 42779286 28211057 26554007 13358126 50364909 42780077 76788088 52080892 42519397 28211079 57866518 46906376 71894206 23099905 56964856 42779330 70725292 25011617 15673821 56962551 39938676 52081164 70726971 56419347 15896872 15614638 47459286 15675788 81428318 cdd: 10472 xref: COG0602 gene: NrdG desc: Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones] num: 43 28379381 46906521 70727187 15896859 15672256 81429067 24379363 76787974 28210022 42782671 55821933 22538217 29377229 25012075 15928202 15674526 52082453 52079923 16078438 15900141 26553949 73661454 42518224 15902229 15893772 15675857 24380406 42780534 15614805 78045054 55820876 58336508 56419512 18309900 23100258 15926387 78043751 57866337 19746973 56963892 52082113 73663319 57865539 cdd: 10473 xref: COG0603 gene: COG0603 desc: Predicted PP-loop superfamily ATPase [General function prediction only] num: 16 16078436 24379365 56963894 52079921 15926389 56419510 57866294 70727185 42780532 56965845 23097767 15896861 73663317 78044764 15614807 55820874 cdd: 10474 xref: COG0604 gene: Qor desc: NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] num: 66 42518337 52079404 81428617 15614029 23098273 28377061 23097636 56419964 29374762 70725684 73662009 81429443 42782521 15612926 81428577 24379195 29376225 81428975 28377043 57865407 24379534 16078904 23098323 42781260 52079020 28894877 28378924 46907006 42781827 15927950 46906858 15613498 81428152 57867716 70725853 81429005 56962524 42781736 81429446 28378352 28378586 28378234 24379114 42779953 28379486 16078096 29377138 15672699 42779279 70725098 42780175 28377129 42782547 10957173 46908745 15927766 28563928 28378566 15613301 73662943 28379184 56419569 28379919 42782572 73661842 81429485 cdd: 10475 xref: COG0605 gene: SodA desc: Superoxide dismutase [Inorganic ion transport and metabolism] num: 38 50812268 15672390 22536952 15900660 42784624 24379102 55820786 25010863 76786766 52081038 73662512 18310218 56420823 23099387 46907667 15614126 56420992 42780667 15902718 15895827 16078993 29375094 56963480 15925837 15613972 20807338 57867086 19746368 15927133 15675326 28209929 42783401 81428506 56963584 39938928 52080625 56964938 70726364 cdd: 10476 xref: COG0606 gene: COG0606 desc: Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] num: 5 56421823 28210943 15895042 20807902 18310686 cdd: 10478 xref: COG0608 gene: RecJ desc: Single-stranded DNA-specific exonuclease [DNA replication, recombination, and repair] num: 42 57867492 23099481 15927216 78043570 56419129 42779920 15672614 25011329 22537366 52081241 70726286 20807647 19745988 15894481 15895500 16079094 76786929 46907753 58337522 42783656 18310922 57867139 15674946 56421115 18311047 55821231 24379867 28211808 81428888 42519347 73662432 15900519 15902581 20808502 16079816 42783539 15613803 28378711 28211395 29376242 56963333 15895544 cdd: 10479 xref: COG0609 gene: FepD desc: ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism] num: 14 13357581 29377541 13357918 13357579 13357578 13357961 13357626 57866247 56420800 73663418 13357917 13358080 13358079 13357960 cdd: 10480 xref: COG0610 gene: COG0610 desc: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] num: 19 15925899 24379349 56419917 70725063 15828903 15675717 31544889 78044246 15829148 13357652 28377764 52082593 57865914 52079178 55820771 19746825 15672632 73661363 47459118 cdd: 10481 xref: COG0611 gene: ThiL desc: Thiamine monophosphate kinase [Coenzyme metabolism] num: 7 23098099 15613107 56962641 52079046 15894096 16077657 78043238 cdd: 10482 xref: COG0612 gene: PqqL desc: Predicted Zn-dependent peptidases [General function prediction only] num: 75 15904071 16078749 42782871 24380481 52080278 15673955 81428096 29377602 16080793 56963985 20808083 56419822 58336984 58336983 55821980 20807832 56419823 23099061 23099072 22538287 29377603 28378891 42782893 15614956 15926862 15902029 46907620 70726636 28378892 24380482 20808082 73662796 15893947 16078748 57866777 15904070 76788335 70726635 57866776 78043889 23099071 15894908 76787361 19747031 15614968 15902028 52080292 56963972 18310906 56963973 22538288 42782872 25012147 15675931 73662795 15926861 15673954 15895677 16080794 19747030 46907621 28211933 28211405 55821979 28210967 18311048 52080291 81428097 15675932 15614955 56419806 25012148 16078734 42518759 42518760 cdd: 10483 xref: COG0613 gene: COG0613 desc: Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] num: 8 23098430 15894377 15615934 78043953 18309997 15614846 20807816 18311129 cdd: 10484 xref: COG0614 gene: FepB desc: ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism] num: 6 42783496 46908602 56965189 15615852 28211051 15613553 cdd: 10485 xref: COG0615 gene: TagD desc: Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] num: 19 42519613 28211352 57866200 15672200 58336845 81429187 28378016 29375751 70727254 16080627 73663387 15926318 28377193 56964865 15672906 18309465 52082108 23100363 46907316 cdd: 10486 xref: COG0616 gene: SppA desc: Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] num: 8 52081444 16080005 56964512 73662359 20807332 15615760 46907816 56421326 cdd: 10487 xref: COG0617 gene: PcnB desc: tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis] num: 39 15893603 56420716 20807771 58337270 78044937 15674894 30024049 39938588 73662596 56964308 16079302 25011453 42780739 28210893 28378528 24379353 20806638 76787734 23099220 42519026 15896797 52080753 19745936 15895332 15903456 15614247 81428615 15927038 78044411 29376121 55820512 15901397 70726456 46908138 15615444 57866965 56963834 22537488 18309004 cdd: 10488 xref: COG0618 gene: COG0618 desc: Exopolyphosphatase-related proteins [General function prediction only] num: 55 31544241 22536715 13507879 78044937 54019974 12045043 42518568 29375940 28378117 50365451 57867209 58336752 15828493 28378873 42560700 50365305 15672717 56964492 15895080 55820812 71894352 78042714 15674776 19745817 15903219 15829163 20807838 25010651 13508288 73662372 18310666 42783784 39939232 15615735 76787330 26554037 47458902 56421282 52081428 12045232 15901158 15927281 24379713 31544703 71894351 16079977 13357979 28210963 46907806 23099636 81427998 39939234 71894299 70726222 54019975 cdd: 10489 xref: COG0619 gene: CbiQ desc: ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism] num: 85 81429449 20806768 46908771 58336440 46908806 76788449 56419156 73661668 22537772 26554423 15904065 28210471 42779222 15612729 19747025 76787742 22538283 15902023 28212150 15903335 39938666 24380476 31544781 25011719 19746735 56418672 15896351 42782377 25010911 52082483 15902475 24380282 12045034 71894671 42519582 54020344 76787209 15927800 15675926 55820384 47459266 56961963 20808628 73662002 18311354 29376661 81429348 22537002 28377091 15828859 42781728 15672261 15900399 28377869 58337223 70725834 13507934 15901289 15894646 15672308 73663024 42561242 42518459 23098258 52078641 15894059 28377150 15926661 57866567 58336659 29374883 78043489 42518158 25012143 70726883 56963700 13358101 15928269 15675627 57867748 23097604 55820406 18310564 25011783 55821974 cdd: 10490 xref: COG0620 gene: MetE desc: Methionine synthase II (cobalamin-independent) [Amino acid transport and metabolism] num: 37 42783100 28379648 16078383 23098509 73663725 55821939 52082467 16080946 58337371 15672700 46907076 15613001 70727637 22538184 25012043 76788547 42519693 30024031 73663361 15926057 28378113 70727222 28379212 52079820 28378513 56963214 15902558 56963345 55820945 55820837 15900494 24379327 50812304 57865964 46907912 24379880 29375031 cdd: 10491 xref: COG0621 gene: MiaB desc: 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] num: 38 52081091 20807443 73662777 18310075 56419838 56963955 26554249 20807824 56963428 16079597 16078764 15894568 28210972 70726341 57866805 23099083 42782856 78044693 26553616 78042734 18310657 70726621 28210988 15926875 56421035 42783437 57867026 18311007 52080307 15895113 23099419 15614935 20807803 15927156 15895089 28211649 15613914 78043523 cdd: 10492 xref: COG0622 gene: COG0622 desc: Predicted phosphoesterase [General function prediction only] num: 56 55820354 15926736 73662043 15901707 20807115 78044895 52081336 42783630 15673262 76788676 46907459 28211458 56963808 26553582 23099559 28211947 57867656 15903522 15900527 15615628 56421199 24380090 20807170 81428021 22537738 15903736 42782155 28211979 15674513 78043039 70725888 28378050 56964415 15896006 25011687 19745521 18311480 73662952 28379433 13507865 15902588 57866662 78044258 29375699 42782513 15901473 28378860 12045059 15614422 47459138 15828773 16079887 70726810 18311234 78045236 15895922 cdd: 10493 xref: COG0623 gene: FabI desc: Enoyl-[acyl-carrier-protein] num: 18 70726948 46908062 42782870 15672548 42780413 28378371 81428436 15615406 52079675 15926599 73663083 56419369 57866572 50812220 29374921 46907202 56964282 23097678 cdd: 10494 xref: COG0624 gene: ArgE desc: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] num: 90 42783892 73661533 22537376 56421787 15672824 50365255 56965498 15927328 15901965 15927582 78043993 81427834 56965245 46906782 15613324 15675440 56962442 23098566 15902192 52081740 76786844 15895980 57865442 73661655 23100741 76787443 20808165 56965090 16079029 56965543 19746039 28211532 15615834 42779628 56964791 46906505 16080306 19746490 28378070 81429301 29377628 28211573 15672546 24379663 56965274 39938776 70725133 42781394 24380289 73662321 52081498 15675062 28378571 15615241 42518589 28210637 56962346 70725587 22537780 70726172 15900531 52080667 23100899 16078599 81428038 56965721 29375733 52079534 15904001 15902591 42561087 25011340 73661677 70727264 29377065 46907850 56421366 57865651 57865731 29377459 57867192 29375269 15616437 55821139 15613622 58337290 18310193 16080050 15900088 25011727 cdd: 10495 xref: COG0625 gene: Gst desc: Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] num: 6 15901393 19745980 24379712 55820813 15674938 15903452 cdd: 10496 xref: COG0626 gene: MetC desc: Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] num: 44 15614299 15614190 15613105 15926138 56963710 70727634 29377727 42783837 42783382 56961803 20808003 42783383 57865967 15613362 18309158 56962640 15893682 23100404 15893681 46907910 56965696 46907911 57866070 19745337 24380053 73663723 15673899 56963632 73661562 70727547 15926060 28379151 15901371 20808014 57865966 15614191 70727635 73663722 15926059 15903420 55820445 15674377 23100501 15894217 cdd: 10497 xref: COG0627 gene: COG0627 desc: Predicted esterase [General function prediction only] num: 21 56965591 24378638 57865658 55821195 57865705 73661764 15902583 70725371 19746007 15673753 22537343 25011307 29375377 28379821 46908604 76787908 28379169 15928215 15675022 15900522 24379842 cdd: 10498 xref: COG0628 gene: PerM desc: Predicted permease [General function prediction only] num: 81 42782011 15903400 28378815 29377087 15926939 56421273 28211423 81428086 56963356 46907181 76787648 70726947 15894954 29375296 15894017 52081223 81429080 57866582 23100493 19746066 46907647 70726551 46907143 20806564 78043486 52081417 29375032 57866873 56964203 15613026 15613829 56963750 73663082 42518755 42781075 15673164 15673797 81427661 20807695 18310763 42783773 15615484 15926600 23099465 28379561 22537352 56962071 15895070 25011316 55821153 28210953 24379852 24379535 58336979 28210756 46906829 42784615 25011220 18309525 78045196 42783519 42782433 73662707 23099624 18310895 15675014 76788071 22537260 15901352 29375932 58336393 55821093 28379647 15675097 42518127 29376343 18309702 23097847 28378015 56421092 19745999 cdd: 10501 xref: COG0631 gene: PTC1 desc: Serine/threonine protein phosphatase [Signal transduction mechanisms] num: 45 70726697 25010380 42560856 56419710 76787637 26554014 20807944 15675502 30024059 58337593 29377577 24378968 13357774 56964081 23098963 42781869 42782955 12044960 15926802 22536501 16078639 28210912 47459393 15893698 73662862 19746551 15903620 55821412 13507986 18310721 15901565 31544843 42519410 15615068 81428306 15829157 71894146 28378318 50365036 46908053 15895004 15893333 57866757 78044484 52080179 cdd: 10502 xref: COG0632 gene: RuvA desc: Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] num: 43 50365239 22538230 20807635 15613787 16079826 81427980 73662426 28211817 12045218 58336747 46907761 57867153 52081253 56421127 25012088 15675869 13358012 15674189 13508274 15902209 15829128 23099492 56963319 42561075 47459105 78044333 70726280 55820159 42518563 42783552 15927222 54020197 15895553 18310930 24380422 31544808 71894187 15900116 26553733 19746986 29374722 76787979 28378879 cdd: 10504 xref: COG0634 gene: Hpt desc: Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] num: 49 15829022 15926187 15899961 81429210 24378544 13357661 42518733 15673501 28211841 29374905 15896450 42561368 42518611 56961887 70727500 76788478 78042635 57866072 42784021 73663555 31544229 22536200 13508411 58336938 26554473 50365280 71894396 19745211 26554033 28209971 18311453 28377430 18310942 16077136 12045317 20808758 23097533 25010089 15902055 15672002 52078563 46906451 42560804 54020347 47459269 55820114 15612647 56418596 42779143 cdd: 10505 xref: COG0635 gene: HemN desc: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] num: 43 56421042 20807433 15613906 31544373 23099426 15901263 78044379 16079604 81428851 15894561 56419177 18311018 15673121 73662483 24379821 15895539 22537053 15613715 56962277 42780040 42783444 15903309 25010961 56963421 55821243 52081099 57867040 28211803 46907704 52079472 19746022 16081159 28212117 29375873 70726334 13357834 28211656 26553953 15675037 28210562 18310917 15927163 76788033 cdd: 10506 xref: COG0636 gene: AtpE desc: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] num: 19 26553509 15901175 19745319 15674802 13508342 15896124 15674359 29376061 54020001 55820561 15674249 15903409 15828742 15901361 18310624 71894425 19745841 18311174 13357693 cdd: 10507 xref: COG0637 gene: COG0637 desc: Predicted phosphatase/phosphohexomutase [General function prediction only] num: 55 31544554 28377028 15894142 16077989 71894130 46909020 42518885 15672411 15895872 76787683 73661895 20808387 52079101 56961873 18309257 81429277 15893448 15829106 25010254 29375539 70725735 42783322 15896477 15616426 15674711 58337107 29377610 29375007 76786750 22536523 29377391 42780513 46908985 24380119 42518300 16080508 19745739 58338115 81428461 28379494 15893920 28377578 81428446 57867788 28376999 28209952 46908486 15927900 20807284 52079399 55820471 15672725 22536365 25010402 47459231 cdd: 10511 xref: COG0641 gene: AslB desc: Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only] num: 19 15895547 20808722 20807642 28211811 50812176 20809099 20807614 55821488 78043460 20809086 18309617 42782276 20807622 20809080 15893946 42782277 55821919 78044483 18310925 cdd: 10512 xref: COG0642 gene: BaeS desc: Signal transduction histidine kinase [Signal transduction mechanisms] num: 290 22538257 70725406 58337789 18309189 24379560 58337061 16078513 42780292 28210566 28209959 25010663 76786986 78042822 15902752 23098040 81428826 28379052 56419442 20807497 76787872 15896895 15673728 73663370 15927942 15672986 28211579 78043110 16078463 18309933 16080091 42781735 56418842 52078906 15893517 25011873 56420876 78045086 42784423 15893582 20807255 15613717 56962948 24378573 42519506 56420367 56420149 42781677 23099969 46907606 24379133 15616474 42780166 29375830 56420691 56963465 15901468 56962271 24380178 42781721 28377206 25011711 56963027 52082552 15896016 52078769 15894190 76786788 18310174 15673575 70725336 57865584 56965404 20808828 15893815 56962978 25011073 55820413 15612852 56962942 15614483 28211918 16078391 29375511 42781026 22537764 28209930 18309823 56419521 42783576 42782325 28209857 15615263 52079040 16080374 25011017 15904038 18311221 22538190 28211157 15895987 24379449 58337918 15674494 56420003 76788245 15896562 56962996 56963514 15614826 15900512 15616039 56961826 28378255 28210165 18309968 28210588 15614372 22537930 15926337 15900692 42518844 25011439 15893663 28211447 15613099 16080197 15614576 52082493 55820523 76788649 20808918 28210333 52079902 16079695 46907736 15674900 42780523 73661849 15896466 55820847 42783973 22536309 42781128 15902573 52079997 42781948 15613736 18309102 76787558 56420058 55820942 18309217 18310968 42781730 28211550 56965314 15894795 52079915 22537474 28210436 16078417 24379475 42780488 52081788 15615987 22536791 42782233 42779714 81428993 46908753 28210359 18310494 70725600 15613382 16081016 56963625 42781356 78043927 20806987 15926382 19745449 22537144 76788019 52080050 56419479 15893615 52082429 42783707 15896753 28211767 16080524 28210437 18311345 29375630 15903516 52078745 15894831 20808756 28211461 15615511 56964992 22537137 15893609 16077444 25012117 15894150 15928210 15893942 25010197 28211539 76787811 57865390 23097813 78042954 15613317 42783972 18309440 16077270 29376396 18311469 16078430 42781807 15613951 42782720 28211097 42783105 15675070 42784055 70727233 42784036 23098287 42781388 28210148 42779508 18310908 52080823 70725697 42780661 46907971 57866222 18311080 42780529 56962169 76786746 28210209 52079393 56962304 28210523 16080355 76787688 15673656 15895699 28373152 18310969 42519460 23098050 42784014 56963289 73662633 56421686 15893728 15896632 42779796 56965748 19745943 15612835 52079559 15673418 81429064 58337701 55821338 15675803 52081821 42519059 15615279 56962037 58338067 25012048 24379576 42519761 23099135 15893742 15901999 19746915 15894785 44004552 24379373 42784220 15614110 29376801 cdd: 10513 xref: COG0643 gene: CheA desc: Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] num: 15 42780822 52080246 78044758 56964347 28211383 16078706 15895488 23099998 56419777 78042810 20807864 46906943 15615532 20807518 15893414 cdd: 10514 xref: COG0644 gene: FixC desc: Dehydrogenases (flavoproteins) [Energy production and conversion] num: 6 15004717 20806803 78044359 20806802 78044787 56965344 cdd: 10516 xref: COG0646 gene: MetH desc: Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism] num: 27 24379328 15614192 73663724 28211449 15926058 15893583 15893867 42783379 56963633 52079600 22538183 70727636 25012042 56419252 28378112 23098146 20808220 15614193 18310399 56963634 56419251 42783378 57865965 46907909 16078165 52079601 76788020 cdd: 10517 xref: COG0647 gene: NagD desc: Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] num: 33 19746024 56962184 73663155 58336773 23100176 76788561 42784142 25010963 28378834 15903307 22537055 70727025 56421503 57866452 16080282 52081724 24379818 15901261 15615990 46908575 56964709 15926518 81428046 29375763 15613637 55821241 16079929 56962139 42518594 23099815 56962628 15673125 15675039 cdd: 10518 xref: COG0648 gene: Nfo desc: Endonuclease IV [DNA replication, recombination, and repair] num: 29 29376286 42560664 47459383 56963463 31544574 23099393 42783410 18310061 56421009 78044027 20807725 73662508 70726360 15927137 52081050 26553573 46907677 16079568 54020015 28211396 15613949 15829092 28378618 50365149 81428478 57867090 71894149 15894910 39938940 cdd: 10521 xref: COG0651 gene: HyfB desc: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism] num: 22 78043942 15926302 23099449 46908554 28211021 70727003 50812286 28211020 70727271 15613879 28211022 57866281 56962564 20808131 57866492 52081658 23100561 20808128 56963397 73663135 73663402 15926538 cdd: 10522 xref: COG0652 gene: PpiB desc: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] num: 26 25011627 55820596 28210402 25010385 15900665 76787691 55820706 15896024 76787428 18311548 42783178 15614108 15903436 56963567 18310549 15902723 23099287 15672347 22537673 56420833 15901382 22536506 24378973 23098815 56962523 42519101 cdd: 10523 xref: COG0653 gene: SecA desc: Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] num: 54 52082064 58336995 15896101 56421642 39938960 15901536 78044472 15672097 57865699 12044924 55821702 26553999 50364872 15926430 15616168 22537827 13507949 73663272 15828575 23099951 20807023 28210087 70727137 42518771 42784340 15901590 13357676 29376311 25011560 46906828 22537594 76787555 15675639 47458921 19746746 18311153 46908682 25011771 56421705 57866380 15928235 15903587 24380200 81428108 28377599 70725332 54020130 56964832 16080583 76786722 31544235 71894152 42518482 42560648 cdd: 10524 xref: COG0654 gene: UbiH desc: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] num: 16 73661914 70725752 56963189 15927886 56963155 67077958 42781788 15614414 42781295 16077790 23098093 16078114 52082274 15614561 52080081 57867832 cdd: 10525 xref: COG0655 gene: WrbA desc: Multimeric flavodoxin WrbA [General function prediction only] num: 38 78043795 18309897 15894043 78042953 16080668 70727328 23100539 15926279 15901775 15613573 15896723 15896742 28377786 78043156 15895784 52080402 23100557 28377383 42519045 23100682 16077967 78042813 15896732 28210712 15896584 73663426 78045227 15895791 56964952 81428768 15903810 52079377 15895272 42784328 58337297 15896577 78044261 56962310 cdd: 10526 xref: COG0656 gene: ARA1 desc: Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] num: 76 58337698 29375231 25010537 19746602 15895230 55821361 24379292 26553923 57866314 73662667 15672250 52081830 58338188 15901328 26554252 15926380 15616411 58337239 42783212 24379151 26553933 15927362 16079957 28379735 58337320 42519674 28377154 76788197 46908879 15672315 23097990 15927780 23097844 42779297 42519632 28379284 42519093 57867262 28379285 56965239 31544640 42784252 46907056 58337321 52081189 42519084 42519871 56963875 56419097 26554399 46908480 25011584 15675551 15903375 70727191 15673225 15673856 73662287 24379152 76788514 70726142 22536612 58337322 28377084 29375714 58337331 58336885 81427646 73663742 46908764 15614721 73663323 23100119 16080393 22537619 81427851 cdd: 10527 xref: COG0657 gene: Aes desc: Esterase/lipase [Lipid metabolism] num: 63 29375018 57865533 28377814 24380056 28379872 28379374 42519440 52081679 58337743 22536949 25010492 58336488 70725527 42519652 18310563 15926332 57866218 25010860 18309724 73663374 58337888 15675257 56963904 46908324 73661861 18309161 76788336 19746621 57865368 28377793 15927930 15614811 56421389 24379201 24379116 58337628 15896648 15675569 29377640 22536566 28379871 28211180 18309289 15673289 70727107 73661651 73662947 42782243 15615369 15926023 29377427 15672412 52081173 15928114 70727237 46906350 15896170 81428501 76787206 70725709 19746289 42518200 42782309 cdd: 10528 xref: COG0658 gene: ComEC desc: Predicted membrane metal-binding protein [General function prediction only] num: 17 46907710 16079611 15613898 25010857 15675328 15900832 22536946 78044560 24379099 76787621 15894553 19746370 55821537 29376941 56963413 15673754 15902901 cdd: 10529 xref: COG0659 gene: SUL1 desc: Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] num: 19 42780044 15672032 46907129 29377465 16077226 18310462 52082010 67078295 73661607 52082632 73661883 46906769 16080519 28211101 42779799 70725725 15612977 23097819 29375505 cdd: 10530 xref: COG0661 gene: AarF desc: Predicted unusual protein kinase [General function prediction only] num: 15 55821087 56421311 56420289 42781264 28379783 15615271 20807646 15893331 20808256 56963586 23098764 78042727 78042754 42783944 18311510 cdd: 10531 xref: COG0662 gene: {ManC} desc: Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] num: 23 58337958 52079433 56421839 15894730 73661492 22537794 42781543 76787820 56962599 16077508 52078980 15612940 16079709 28211533 18310949 15615283 52079880 25011738 23097828 16078965 42783801 15612933 56418709 cdd: 10532 xref: COG0663 gene: PaaY desc: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] num: 23 78044550 20807643 56420557 42783951 52081537 16080477 16080104 15612774 52078725 78043157 23100346 56964641 15894335 28211337 56421383 23099767 18310633 15615851 15903014 52081978 29377382 56421657 20807501 cdd: 10533 xref: COG0664 gene: Crp desc: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] num: 85 78043278 46908367 15894789 46908399 55820250 42519570 58336871 28379769 25012155 46906793 56419303 28377056 18309329 52082448 76788101 18309758 20809102 46908561 28378163 46906992 57865659 20808042 18311504 42782514 28211511 18309382 46906324 78044021 15896579 42782836 15673985 46908930 15612794 15674216 28211595 58338208 24380428 22537874 28211554 25011921 22538032 52080453 19746495 46906352 15928217 46906392 42779557 78043177 81429393 76787375 56419323 22538295 42784583 52080456 24378661 46908398 28212070 46906842 28210607 70725370 46907474 16080782 46906515 81427989 15894171 29374758 81428397 46908368 18310423 18309761 46906985 25011819 16080784 42780646 46906432 29376466 56419292 18309975 29374728 15004786 19746785 15675445 15675678 76787496 46906522 cdd: 10534 xref: COG0665 gene: DadA desc: Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] num: 42 16080316 16078103 57865487 55821252 56964360 19745994 15614604 25011323 56421998 24379859 52079670 42779545 28378450 52079523 52081748 23099184 42782242 42779877 56962308 15674952 70725565 29375049 42780505 23098470 42781799 56419158 15613997 22537359 23100257 46908143 15901448 16078232 56965704 30024057 42781921 76786716 15895855 56963501 15903504 15616433 28210170 56419934 cdd: 10536 xref: COG0667 gene: Tas desc: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] num: 45 56964371 15926278 73663499 52082534 28377141 16079738 56420856 23099307 28379352 56963432 42781146 81427875 15616411 46906323 70727329 52079778 15927081 78042764 56964733 42783211 70726417 56963182 28379805 58337390 16081029 16077346 52080881 23097762 46908233 73663427 16079419 26553965 15673968 24378877 15613574 23097901 16078018 57866975 28377085 46907111 57866193 73662561 56964460 56420510 50365068 cdd: 10537 xref: COG0668 gene: MscS desc: Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] num: 12 22536289 15901584 15903639 55820229 25010178 28210229 15896957 70725123 76788055 15615229 73663686 57865816 cdd: 10538 xref: COG0669 gene: CoaD desc: Phosphopantetheine adenylyltransferase [Coenzyme metabolism] num: 37 71894661 15674144 28210921 15901791 18310711 15828568 28378752 15615152 42783024 55821624 76788431 15895015 52080105 78044695 25010571 56419634 20807930 24379000 19746486 42560820 56964142 46908287 22536634 73662972 42518925 15903825 23098906 70726829 29376945 26554413 58337143 15926709 47459411 57866627 15675436 81428683 16078566 cdd: 10539 xref: COG0670 gene: COG0670 desc: Integral membrane protein, interacts with FtsH [General function prediction only] num: 27 16077787 56420062 15926343 15896086 42519089 81428253 46908441 57866235 58336863 42519583 15674509 24380095 22537744 70727227 15901795 15903829 28378221 23100144 47459278 15673718 15828698 25011693 29376434 76787395 73663366 19745517 55820346 cdd: 10541 xref: COG0672 gene: FTR1 desc: High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism] num: 5 15926046 55821053 78043804 16080879 70725687 cdd: 10542 xref: COG0673 gene: MviM desc: Predicted dehydrogenases and related proteins [General function prediction only] num: 159 22538219 15901332 52079243 56962159 28379915 73662643 23100019 52081610 23100876 16080169 18309075 81429148 42518246 15613811 29376868 24379792 15925922 20808354 29375817 15613271 67078167 56965047 52081510 15613050 56962162 56962381 15894759 81429201 23100924 15614728 52082230 19746975 56964915 22536626 23100695 56965050 56962145 76787333 15903378 56965040 22538029 81429172 15674565 46908987 46908396 42783853 56420433 16080406 15614784 56965200 56965041 16079829 46908392 52082526 46906597 15674637 56965234 56962570 58336524 56418894 29375589 23100020 28210621 25011919 56420413 56962924 20807145 19746505 56964927 20806725 76787610 15903573 15896641 73662642 76788456 46909023 56421701 15004838 46907956 23100857 16078148 28379912 76786889 58336729 22537685 23100853 56420649 23100875 15673536 15613273 23100716 16078117 23100856 25011638 15894514 20808355 50365024 56420432 58337459 16080062 19745659 30023985 18309072 23100926 56962353 28377917 19745572 29377211 67078162 46906518 52081873 56963339 20808538 15901179 23100827 29375415 23099538 56420647 56420434 28377938 28211865 56963775 42782478 15616405 46908090 25010564 28379132 42780971 15673805 56964461 25012077 18310227 28210253 54020368 52079589 16081021 42782665 15925921 16077895 54020362 28377663 15675859 15901521 28379131 20808788 56421755 28379913 15614879 28379917 15673643 15614783 56965201 23100151 56962209 56962603 28210255 56962207 42782455 15615266 cdd: 10543 xref: COG0674 gene: PorA desc: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] num: 27 15895497 15672404 46907060 15895764 78044081 57866794 15926872 20807664 20808578 20807442 28210852 56419836 73662785 28211392 18311043 20807787 70726625 29377046 78044828 42782859 29376666 78043048 20806954 78042939 15895724 28212105 15614937 cdd: 10544 xref: COG0675 gene: COG0675 desc: Transposase and inactivated derivatives [DNA replication, recombination, and repair] num: 23 56420522 56420873 42781659 56420894 58338127 58337691 56421415 42781532 67078292 56418906 28373147 56420785 56420181 20807202 28210354 78043638 56418940 67078009 28373167 42781959 56420351 56420643 42780440 cdd: 10546 xref: COG0677 gene: WecC desc: UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] num: 12 56962290 20807144 28211866 15896553 15903005 42779640 23100386 23100350 15925867 56421700 52079244 23099535 cdd: 10548 xref: COG0679 gene: COG0679 desc: Predicted permeases [General function prediction only] num: 22 56965229 15896202 57867739 15927838 70725795 52079403 15615233 73661964 78043372 42518620 58336895 73661451 20808351 56964199 28379734 28379305 46907062 15673902 23100047 30024026 42560595 24379357 cdd: 10552 xref: COG0683 gene: LivK desc: ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] num: 15 55820452 42781079 56421561 56420199 15902703 22537722 56420472 23098142 56421515 15900644 25011672 15612814 78043507 28379420 24380047 cdd: 10555 xref: COG0686 gene: Ald desc: Alanine dehydrogenase [Amino acid transport and metabolism] num: 25 23100680 15927020 70726217 57867221 23099643 78043495 56421983 52082557 16080244 15673219 56421287 42779737 20806687 52081691 56962541 28210603 15615742 73662366 15614892 42783804 46907810 42560624 15927286 47458935 28210131 cdd: 10556 xref: COG0687 gene: PotD desc: Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism] num: 35 56420546 42560776 28377237 52078845 42518816 15673148 73662996 42780475 50365326 15901240 29377133 24379418 56964968 18310251 76787391 71894523 15903286 25011226 70726851 39939148 29375794 18310953 55821511 15894124 22537266 46907040 19746056 15828893 15926687 23100612 58337032 56419261 57866622 15675088 81428971 cdd: 10557 xref: COG0688 gene: Psd desc: Phosphatidylserine decarboxylase [Lipid metabolism] num: 9 78043017 15894086 28209853 52081651 15893329 39939098 15613874 42783465 18309010 cdd: 10558 xref: COG0689 gene: Rph desc: RNase PH [Translation, ribosomal structure and biogenesis] num: 13 46907457 29375698 18311236 16079889 81428020 20807113 56421201 78042648 42783632 56964417 52081338 23099561 15615630 cdd: 10559 xref: COG0690 gene: SecE desc: Preprotein translocase subunit SecE [Intracellular trafficking and secretion] num: 26 19746939 22538199 15828652 24380296 28377492 15612680 13358145 56961917 57866120 55820312 70727473 15903863 18311401 15674087 15896398 81429287 25012057 15901831 76788053 47458981 29377207 12044905 15675826 31544852 58336695 13507807 cdd: 10560 xref: COG0691 gene: SmpB desc: tmRNA-binding protein [Posttranslational modification, protein turnover, chaperones] num: 44 24379987 52081941 42518803 42561376 15674609 58336786 29377101 71894492 15673704 15616114 18310277 13507813 57866445 26553806 50365026 15894004 70727105 15926458 28377651 55820705 12044911 39938632 15902923 15828823 28210141 47459099 42784277 23099881 20807465 73663215 25011589 56421578 22537624 46908621 15900853 81429020 54020341 13357614 19745622 76788109 16080413 78043075 56964766 31544647 cdd: 10561 xref: COG0692 gene: Ung desc: Uracil DNA glycosylase [DNA replication, recombination, and repair] num: 41 70727410 13358112 23099584 56965688 15901034 24379639 29375532 22537314 42518808 73663443 16080848 46906621 19745970 47458907 15829086 26553660 12044949 76787888 81428955 15672216 18309247 56421956 25011280 58337024 71894323 15903099 52082296 42784572 54020108 55821080 57866169 15616412 31544813 28377657 42561031 46907446 13507974 39938649 15926259 15674927 50365059 cdd: 10562 xref: COG0693 gene: ThiJ desc: Putative intracellular protease/amidase [General function prediction only] num: 54 56421233 16080956 52081859 15896593 15902757 28210309 13507771 52081611 54020354 15894907 42518468 52079280 26553522 28377042 70725096 15900697 28211406 50365220 16077852 42781363 15828946 42780011 23100717 23097961 42560993 42783639 81429327 23097478 50365079 56964374 73662934 56963813 15614543 31544415 55820988 58336674 73662681 47459424 15926229 52082477 15894278 42783637 15615587 50812271 56419973 57866901 18311049 46908489 71894041 29374760 23100806 70725219 52079249 56965268 cdd: 10563 xref: COG0694 gene: COG0694 desc: Thioredoxin-like proteins and domains [Posttranslational modification, protein turnover, chaperones] num: 12 15615981 46908571 26553528 15926525 73663148 57866465 31544589 56964703 23099811 70727016 52081716 56421496 cdd: 10564 xref: COG0695 gene: GrxC desc: Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] num: 30 46908514 42783084 55821274 29375104 23099895 42784290 16079984 15926671 56964788 18311421 76786777 15896032 15672959 73663015 15903108 70726871 56421595 18311419 56420610 24379142 81428553 78043783 19746346 20809019 28377563 15675306 57866590 22536984 25010893 15901043 cdd: 10565 xref: COG0696 gene: GpmI desc: Phosphoglyceromutase [Carbohydrate transport and metabolism] num: 29 46908629 70727111 16080444 31544784 56421590 23099890 50365319 73663222 56964782 18310283 28210137 42784285 71894666 54020261 52081959 26553825 12045290 42561347 15616119 15926452 26553472 15828930 15894000 47459166 78042968 39938771 13357740 57866439 13508367 cdd: 10566 xref: COG0697 gene: RhaT desc: Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] num: 39 42779395 28211456 55821599 28378087 58338132 42781767 78044848 42783834 15615310 56963724 18309610 28210524 42781825 16080975 16077290 16077788 15896037 52078708 18309318 15613288 18309113 15894162 81427702 23098063 15893372 42519813 28212015 42779605 52081586 73663297 42780424 42783872 42780905 28209919 16077583 18310299 28211177 42783554 16077323 cdd: 10567 xref: COG0698 gene: RpiB desc: Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism] num: 63 76786951 15896207 26553520 29376376 25011377 19746613 42784488 24379888 56965373 15675561 19746840 25011956 29376375 15903119 15927775 52082223 13357562 22538069 12045258 70725843 15675560 25011957 15829083 18311180 50364920 73661836 46908853 25011378 70725844 57867733 56965623 54020254 24379889 76788090 19746841 46906743 28210068 46906585 15896206 22538068 47459205 15901058 13508334 15675730 31544344 15675731 15901057 57867734 15894013 16080745 56421906 15616329 18309309 42561413 19746612 18309308 71894407 15927774 15896134 20806675 78043323 46908841 15903118 cdd: 10569 xref: COG0700 gene: SpmB desc: Uncharacterized membrane protein [Function unknown] num: 11 78042849 15614138 20806637 56420819 18311514 56963595 23099279 28210005 15893761 42780670 52080831 cdd: 10570 xref: COG0701 gene: COG0701 desc: Predicted permeases [General function prediction only] num: 25 15894870 19745693 52078829 28894867 56420372 15674665 29375773 78043626 46907155 24379210 28894905 44004512 22536893 55820740 76787414 52080656 42780907 15902849 15900786 28210650 25010806 70725116 18309021 42781186 57865827 cdd: 10571 xref: COG0702 gene: COG0702 desc: Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] num: 34 28379691 70725097 28378086 42781171 46906691 57865596 15928155 24379253 56418890 15926098 52079112 52080333 81427841 46908565 16078090 28379613 73662046 23100308 81428602 15927718 15614083 15612868 70726722 28379504 70726469 23100585 70725891 28379208 16077755 15674152 57867653 70725345 81428148 28379616 cdd: 10572 xref: COG0703 gene: AroK desc: Shikimate kinase [Amino acid transport and metabolism] num: 30 52078822 81428505 73662526 19746324 18309683 29376130 28211258 15675284 15927118 78042786 15903271 46907979 70726379 56420591 22536804 56964246 55820725 76787277 15613063 57867056 15901224 24379243 10957169 42783359 23099910 25010675 20807724 15894861 28378666 15894185 cdd: 10573 xref: COG0704 gene: PhoU desc: Phosphate uptake regulator [Inorganic ion transport and metabolism] num: 43 57866921 18309623 76786792 13508347 28377610 22538098 78043312 81428120 15673697 25011076 46908666 70726527 13357759 31544246 50365052 23099384 20808054 19746169 15926965 22537147 15901659 55821039 15894986 12045271 15901249 15615552 42561023 29376303 58336704 42518719 76788179 15903691 47458846 73662674 15903940 24379564 56964351 25011987 15901904 26554383 15675200 42783394 15903295 cdd: 10574 xref: COG0705 gene: GlpG desc: Uncharacterized membrane protein (homolog of Drosophila rhomboid) [General function prediction only] num: 4 20806909 15674412 78044976 23099378 cdd: 10575 xref: COG0706 gene: YidC desc: Preprotein translocase subunit YidC [Intracellular trafficking and secretion] num: 55 15903894 42561574 25010517 19745380 15828623 42784207 25011697 15901798 70725945 46909042 15672111 73662102 15674429 15903832 54020659 50365496 22537748 46907607 12045323 76787291 15927665 47459465 19745513 16081156 24378835 42519505 57867621 58338216 81428992 52082650 20809127 29377772 71894609 58337788 70725620 13508419 42519904 31544213 57865393 15674505 13358167 15672551 55821782 28378260 15613732 73661782 24380099 55820342 15901862 39938735 28379981 76787971 26554487 22536592 81429494 cdd: 10576 xref: COG0707 gene: MurG desc: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] num: 52 19746473 42783004 56418757 42779645 15926605 73662630 16078400 57866900 42518897 55821117 15895499 46908271 20808072 76787898 28211394 15900590 73663077 29375576 24379030 52081605 76787694 15615128 78045185 15896150 70726489 52080701 28210051 22536655 25010592 57866586 56418754 15926999 15673571 22537328 81428362 70726943 58337118 18311045 16078586 78044085 16079251 15902648 15614520 42783377 56961868 25011292 23098548 55820798 15675423 67078252 28378800 52080124 cdd: 10577 xref: COG0708 gene: XthA desc: Exonuclease III [DNA replication, recombination, and repair] num: 25 24380027 25011656 18310156 58337957 28211273 15903702 28377662 15893514 46908012 58336406 15674547 29377212 42518122 56963720 15901674 19745558 76788417 16081140 81428949 15672773 20808602 23097966 22537705 42519716 55821526 cdd: 10578 xref: COG0709 gene: SelD desc: Selenophosphate synthase [Amino acid transport and metabolism] num: 4 29377054 18311100 78044963 20808285 cdd: 10580 xref: COG0711 gene: AtpF desc: F0F1-type ATP synthase, subunit b [Energy production and conversion] num: 41 73662086 19745843 70725929 13508341 50364926 15901359 56965613 71894424 54020002 20807126 15896123 18311173 56421897 15903407 15673750 58337086 78042703 42518861 81428739 15616320 46908705 26553510 42561407 52082217 57867660 29377097 22537022 16080738 25010932 76788233 28378942 42784479 15927681 23100434 13357692 12045265 15674804 55820563 15828741 24379921 47459048 cdd: 10581 xref: COG0712 gene: AtpH desc: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion] num: 26 50364927 15828740 13508340 15896122 15901358 47459047 18311172 20807127 54020003 19745844 15674805 24379920 13357691 31544507 22537023 15673749 70725930 42561406 15927680 57867652 15903406 76787472 13357690 26553511 25010933 12045264 cdd: 10583 xref: COG0714 gene: COG0714 desc: MoxR-like ATPases [General function prediction only] num: 34 26554032 52080632 46906704 18309638 28210117 42782109 23098298 56418786 15613167 42779771 23098168 28211018 20806880 20808592 16078999 42781270 15613294 15926989 57866880 56420269 42782129 56962707 26553847 16077700 70726501 15895133 73662650 78044536 78044986 28378034 42781381 16078434 28210482 52079118 cdd: 10584 xref: COG0715 gene: TauA desc: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] num: 33 56964645 15613772 28210160 15893402 56965505 56965008 16080111 20807136 24379124 42783981 52079352 15894679 42782016 15893908 56962374 15925877 15615245 56965156 42779572 70725247 56421390 56965508 57865809 56965477 73661767 42779875 52081546 23099771 15902004 16077949 42782118 15904044 18310469 cdd: 10585 xref: COG0716 gene: FldA desc: Flavodoxins [Energy production and conversion] num: 41 23100543 30024002 46907941 24379710 46908386 58336947 81429129 28210183 15674777 42519470 26554365 15895296 56962872 15893876 29376709 19745818 18311076 15903218 18311044 15893496 52080015 52080017 15896658 15895717 15901157 22536717 15896897 58337826 18309626 58337395 28379277 16078479 76787033 16078481 29377049 28378193 42782605 25010653 55821192 42780566 78045091 cdd: 10587 xref: COG0718 gene: COG0718 desc: Uncharacterized protein conserved in bacteria [Function unknown] num: 26 55821574 13357644 78043175 22537886 15612598 15903054 15900969 15893422 76788415 39939101 15672102 20806578 25011830 46908882 54020352 24378889 71894078 47458909 56961820 28209848 12044986 15675681 19746789 28377567 15828521 13508014 cdd: 10589 xref: COG0720 gene: COG0720 desc: 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism] num: 22 52079922 15895852 70727186 15895841 56419511 15895845 57866293 23100259 78044205 15895790 20808732 73663318 16078437 56963893 15926388 55820875 15895836 28377015 15614806 42780533 15896858 24379364 cdd: 10590 xref: COG0721 gene: GatC desc: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis] num: 39 81429161 15672144 47459213 15927475 50364976 73662199 42779430 15902439 23098219 71894117 52079162 22537809 56962868 78045230 46907986 31544812 24380185 42561288 55821603 29375320 15613228 15896231 70726052 16077735 58336858 25011753 28377925 15675616 56418816 20807101 42519593 19746724 12044950 76787528 13507975 57867373 15895929 26553662 15900356 cdd: 10591 xref: COG0722 gene: AroG desc: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] num: 13 15901535 15673235 15672098 15903586 76788616 15903585 22537826 24380198 15901534 55821701 25011770 55821700 24380199 cdd: 10592 xref: COG0723 gene: QcrA desc: Rieske Fe-S protein [Energy production and conversion] num: 15 23099184 56963672 42780723 15895855 56419429 52080764 56421998 23099231 15614235 16079313 42779545 28210170 56965704 52079523 56420727 cdd: 10594 xref: COG0725 gene: ModA desc: ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] num: 14 46907273 70725774 15893573 16080391 15927859 29375964 52079562 73661941 18311067 56421239 15615891 56965134 57867783 42779303 cdd: 10597 xref: COG0728 gene: MviN desc: Uncharacterized membrane protein, putative virulence factor [General function prediction only] num: 7 78043430 20806702 28211862 78044987 81429117 15896298 28211856 cdd: 10599 xref: COG0730 gene: COG0730 desc: Predicted permeases [General function prediction only] num: 30 46908578 57867226 20807985 70726212 42519870 81428071 70725419 42779418 16079980 73663712 29375085 42782158 28379190 56965825 20806629 73662358 58336676 42780106 81427762 15926511 28211572 15614685 15614021 52081175 15927291 16077636 57865552 56420173 28378025 15674200 cdd: 10601 xref: COG0732 gene: HsdS desc: Restriction endonuclease S subunits [Defense mechanisms] num: 24 15927381 20807979 56421440 15900770 55820774 15926110 15828555 13507828 52079177 70725064 52082594 19746826 19746183 56418879 56419916 15675214 15828905 15902492 78043287 15672634 15900419 73661361 24379345 15675718 cdd: 10602 xref: COG0733 gene: COG0733 desc: Na+-dependent transporters of the SNF family [General function prediction only] num: 31 46907991 56963726 15612780 52079425 28211575 73663607 42780992 42781310 23099823 52081731 56963045 52080627 16078994 78044612 15900632 28210880 15902692 70727551 16078012 23098315 28211576 42780626 15616001 28210536 42783187 15926136 15613691 56965763 28211182 57866067 18310353 cdd: 10603 xref: COG0735 gene: Fur desc: Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] num: 77 16079565 20808265 52082400 28377707 73662511 56419013 20807701 56421004 52080870 57866973 15674392 46908190 23098360 78045079 28210267 16077938 73662563 70726103 31544575 57867087 28211956 78044413 13508068 15614090 70726363 18310192 29376090 42783405 15613514 76788267 15927435 42779672 18310444 78042705 23099304 25010500 56420852 22536574 52081045 29376147 70726419 73662241 18310758 57867293 50365409 15894238 42783206 52080349 16079409 52079333 55820790 56963469 12045091 81428640 81427722 23099853 42561217 20808186 56963094 19745351 15894959 29376912 46907914 15895892 28379623 15613959 15927079 24379071 20806792 28210759 20806879 46907673 15673458 81428080 56963545 26553574 15927134 cdd: 10604 xref: COG0736 gene: AcpS desc: Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] num: 42 28212096 20808555 73662115 70725961 29375436 31544609 26553487 13508037 28377408 25011769 42779351 56418763 57867601 15675638 71894122 15828584 15613081 16077529 76787432 55821699 13357954 47459314 42561108 78044717 23098074 18309273 15901533 46907118 39938926 58336607 15672825 42518358 24380197 22537825 12045065 19746745 15927646 56962579 15903584 50365202 81429226 15893780 cdd: 10605 xref: COG0737 gene: UshA desc: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] num: 79 73662738 42519002 42783215 16080290 13357611 46908577 56963210 52079248 56421717 16077984 23097954 22537480 15926612 23099828 15895235 46906370 18310932 57866600 56421518 81428044 73663070 15612589 76788696 70727030 29377366 18311144 47458934 76786868 15672159 42784159 19745940 15673076 55821013 28211620 20806860 28211616 56962740 58336771 15672285 25011445 55820239 18310933 70727451 24379637 25010573 73663160 15828526 15893644 57865724 42783240 56420298 15925849 76786935 29375761 28378836 56964721 23098053 78043585 24379002 57866447 55821672 29374718 15926512 25011967 58337251 54020636 52079394 16077851 15613578 15925728 22538078 70726935 15616015 15674897 42782774 52081734 42782212 70725318 42518592 cdd: 10606 xref: COG0738 gene: FucP desc: Fucose permease [Carbohydrate transport and metabolism] num: 8 42561421 52082229 15893743 28377389 28379819 56962903 18309040 16078116 cdd: 10607 xref: COG0739 gene: NlpD desc: Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane] num: 54 16079850 56964827 23099120 20807323 15616162 78044657 18310596 28211685 18311593 42780678 56421510 52082058 78044701 56964588 76786904 22536216 18311164 29376820 23099946 18309184 10956328 52080817 15927531 15614163 15927783 23099822 20809035 15615998 28210077 42784156 25010105 56964715 52081278 56421634 20807388 20808379 15615578 15925916 15894534 29376040 56963113 20808489 42780628 78044286 52081729 42779871 23099503 21392795 16080287 44004541 15615206 56964370 78043269 73661597 cdd: 10608 xref: COG0740 gene: ClpP desc: Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] num: 39 23099067 18310659 76787269 50812228 28210969 42518794 19745547 15895087 70726774 15673378 25011674 56421597 76787240 23099911 15614960 28211967 56963977 15927540 15672655 56419814 42782881 42779480 29375364 52080286 52081916 15895167 78043074 56419065 28377639 58337015 22537725 15902700 55820449 24380050 15895898 15900641 15674537 18310375 20807828 cdd: 10609 xref: COG0741 gene: MltE desc: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane] num: 12 24379517 15902974 28211718 15613954 20807357 16078973 18310974 19746094 15894385 15672584 15675124 15900897 cdd: 10610 xref: COG0742 gene: COG0742 desc: N6-adenine-specific methylase [DNA replication, recombination, and repair] num: 13 16078565 46908288 22536632 42560769 39938785 76788177 71894136 52080104 25010569 55821625 42783025 42518924 78044003 cdd: 10612 xref: COG0744 gene: MrcB desc: Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] num: 85 56963238 15616374 19745276 52082263 28211843 42784549 15927031 23098621 18310944 56963302 55820310 16079289 42780241 15903950 58337855 15613764 70726463 42518588 56965657 15900292 15615791 56420143 20806831 81428030 81428528 23099674 76787598 52079498 42780652 16080201 81428236 15674320 22536343 29376290 15614265 57866950 56964523 56963820 55820328 56421340 55821841 25010230 78043567 46908125 15895568 56420703 52080740 16080803 15672368 15902373 19746940 19746570 58337444 22538201 15903865 73662603 42781433 76788029 16078075 15672525 15675521 23099211 46908463 29375277 52081644 56421941 23100472 42780752 24378955 15674090 76787392 15901914 22536482 78042905 24380297 24380334 28378431 28378142 25012058 29375724 15675827 15901833 42519122 42519555 25010362 cdd: 10613 xref: COG0745 gene: OmpR desc: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] num: 343 70726233 15903150 15612935 73661850 18309930 57866959 15903517 73662632 15927654 29375829 18311081 76787341 56962036 15672379 25011440 58337790 29377731 25011712 28211448 25012047 29376802 55821369 15615586 15895992 56965768 15893854 19745942 56962941 25010740 42518843 56420909 15902000 28211540 22538097 56965403 52081822 15894784 42784015 52082553 56962979 46907975 16080375 70727234 70725405 42519507 46908673 46908593 52079560 16080092 42780293 56419443 76788272 56420875 42779728 15925723 15616473 46908182 42783577 76786780 42784035 56964476 15893581 18311314 28379053 28209958 56962170 18311346 46907605 73662569 20806986 20808060 16077443 25011874 22538256 15614827 55820412 81428827 55820844 18309101 76788680 16077324 24379577 56964991 15613318 15901469 24379561 42781676 22538189 15673417 25010502 15616589 28377603 78044944 28210332 22536883 25011986 29376752 28377004 73662382 15894117 15614143 15927073 22537475 28210824 28210147 29375010 24379448 56420692 52081412 55820941 18310175 15896909 52078744 15902751 29375629 42780675 78045027 15902380 42780487 15900691 15615264 70726425 15894794 42784219 52082613 58337917 76788079 76788698 15613383 19746167 16078390 15895700 73661330 28210358 23098039 78045188 42781734 15896896 16077269 15903934 56962949 56420814 15902120 15894147 16079963 52078768 28379577 46906528 56421267 15615719 22537765 15896015 15614371 15893516 52078905 24379372 56418866 70725698 81429063 58336426 42784660 15926383 19746916 76786877 22536576 42781127 19745448 67078048 29375184 15672984 23099274 15894830 24380179 42518151 23100907 56965315 28211768 57865896 46907735 29376255 15893741 76787910 42781625 16080525 15893662 15675198 15927941 76788510 42519762 76787477 18311222 47459219 29377770 78043342 42782670 57866897 23098049 15674899 56965856 15900027 70726491 58338068 15612834 15926996 18311470 56963600 20808919 25011016 28210164 70725601 18309218 22537136 70725018 15901898 24379907 22536876 28209933 24379476 15927271 16079696 15675069 57866221 70725337 25010796 15612851 15902572 24379132 42519461 42781949 16080354 22536790 52080826 42781109 56422009 15674628 76787873 28378254 55821339 42782234 46908754 15673657 15926336 16079369 28211166 42782326 81428113 57865946 58337702 22537931 15614507 42784424 23099620 56420225 18309439 42784273 76787576 57865585 57867182 15925773 25010196 81427892 56962305 15901089 15673729 28210587 24380274 55821169 28377207 44004551 56418841 18450333 23099970 73663371 29377115 15675804 29375768 46908857 15900511 16081017 57866317 25012116 28211551 25010662 42781025 15615988 15928211 28211098 29376397 42779797 70725032 76788392 22536308 25011074 18309822 15896754 20808829 28211580 81428994 15904039 76787511 81427690 15900299 52082494 57865389 23097812 42780164 15893941 42779713 42783766 15893613 15893814 42781806 28373151 28211158 20807256 52080824 15613735 52081787 18310907 15673576 20809033 42783708 28211462 42784056 42779375 16081093 42519058 28210522 78044728 19745650 23098286 15894977 18309624 20807496 15896467 56963624 22537145 33416267 58337060 29375510 15613716 56963288 28210565 cdd: 10614 xref: COG0746 gene: MobA desc: Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] num: 16 29375952 57867757 16078490 18310774 73661953 78043234 42783954 52080025 28378207 15615579 56962666 20808906 70725784 56419298 15927849 46907270 cdd: 10615 xref: COG0747 gene: DdpA desc: ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] num: 56 25010259 52081163 22537661 15903237 76788275 20806587 15615317 42779802 15615588 28211058 73661576 20806867 56961815 15616206 19746902 15613130 28211078 15616198 39938677 57865477 15925912 28211534 20806754 15614359 23097918 22536371 15926580 15928046 23100066 56962991 56962340 52080891 56965423 15612594 15893469 42780076 23098228 23099717 25011618 76786926 46906375 56963370 31544725 56962016 23100230 70725293 15925940 15612910 15614637 20808320 15675787 56962019 15613579 70725148 23100526 57865746 cdd: 10617 xref: COG0749 gene: PolA desc: DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] num: 35 57867172 42783764 15615715 15894383 73661352 19745349 24378800 81429016 56964474 28211720 76786985 15674124 29375463 25010498 55821733 50365399 56421265 42561209 22536572 73662384 18310976 20807355 52081410 15902076 28378222 70726235 58337813 42519528 23099618 78045179 15927268 16079961 46907796 15674390 15899978 cdd: 10618 xref: COG0750 gene: COG0750 desc: Predicted membrane-associated Zn-dependent proteases 1 [Cell envelope biogenesis, outer membrane] num: 32 57866744 20807848 29376877 25011940 46907544 19746873 78042913 52080259 42782911 42519366 28210955 23099047 15926845 55820297 15900197 73662815 18310675 15674110 24380150 76788389 70726653 16078719 28378680 15895072 22538052 56964000 15675761 15902286 56419791 81428869 58337541 15614983 cdd: 10619 xref: COG0751 gene: GlyS desc: Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] num: 22 15613934 29376901 16079580 52081072 19746599 15673078 76787186 25010334 56963450 46907686 55820588 58337480 15675548 78042751 22536454 23099403 28378607 15901324 24378935 81428491 42519243 15903371 cdd: 10621 xref: COG0753 gene: KatE desc: Catalase [Inorganic ion transport and metabolism] num: 11 16080956 23100114 16080914 52082398 15613869 15614543 56965727 23100237 23100717 23097890 52082477 cdd: 10623 xref: COG0755 gene: CcmC desc: ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones] num: 14 15927250 56420815 42780674 23099275 57867146 73662402 16079370 52080827 56964396 15614142 15615609 56421181 70726257 78044897 cdd: 10625 xref: COG0757 gene: AroQ desc: 3-dehydroquinate dehydratase II [Amino acid transport and metabolism] num: 9 20807728 28211257 15894186 16079503 78042722 15615364 42783318 18309684 52080980 cdd: 10626 xref: COG0758 gene: Smf desc: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion] num: 35 50365352 76787406 19746109 42782926 23099000 20807897 13358156 54020048 78044382 56419745 57866715 15903187 15895060 81428603 15829018 58337277 42519033 28378509 28210944 25011095 73662828 47459209 24379441 15675139 18310685 46907501 29376206 15615031 71894560 22537166 55820936 70726666 52080213 15901126 56964044 cdd: 10628 xref: COG0760 gene: SurA desc: Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones] num: 14 15675314 24379121 15900858 81428241 15902928 76788083 15673707 22536972 28378171 19746356 23097538 18311465 25010882 15613740 cdd: 10632 xref: COG0764 gene: FabA desc: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism] num: 41 55820481 76787719 46908696 29377344 28378360 22536833 28378367 70725937 29374923 81428432 42781995 15675595 76786941 19746703 20806701 15616297 42784446 18310055 81428425 24380109 22536534 52082160 57867637 15896805 56421864 15902428 56965590 50812182 28209904 15927673 78044325 52078935 15672759 16080690 15900343 25010412 15672547 73662094 23100401 15614413 25010704 cdd: 10633 xref: COG0765 gene: HisM desc: ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] num: 175 70726105 39938563 39938950 46907078 52078867 22536879 39939074 19746296 58336908 15902668 73661928 24378751 18310307 23099528 28210297 42780022 39938973 42783270 70725641 24378948 55820684 25011575 42518507 15902576 15901102 56962547 15903398 15674926 15900370 15901349 55820257 29375354 15927432 15900516 46908518 42779547 55820917 57867284 16081000 56420514 15674455 15903163 52080938 19746201 15675263 44004547 15902667 24379911 25010743 76787176 46907970 42518173 42519235 16079453 23098332 24379047 39939125 76787397 58336907 19745409 25010989 16079988 15903358 76788643 18311075 24379910 24379263 15902453 39938976 15900609 55821173 56962686 55821557 19746578 52078834 56964695 28378896 29375693 15672920 15893668 15900711 16077406 29375694 15901311 23098014 15675231 25010606 78044176 15673741 19746459 56961809 15900515 23098460 15896853 15612734 28377653 16079798 73661927 76786730 16079987 42519234 15902577 28377715 73661552 15927991 15894165 57865359 15614025 81428468 55821558 73662246 15893407 76788581 15896569 39938942 16077428 29375395 20807014 42782597 42518677 15900608 22536321 22537108 15902771 29374889 25010744 55821172 58336459 42779787 25010207 58337335 55821477 81429106 19745969 46908517 23098013 58337336 15675409 22537609 22536475 58337932 15675528 22536670 56962685 46908483 28379592 81428667 24379609 76787817 24379378 28378733 55821010 28377716 39938564 55821629 58336481 42779691 39938943 18309583 76787814 25010355 24379640 29375478 56421989 25011698 42779788 16079799 56962546 76786946 22537749 42518678 15673779 42518711 22536880 56420513 cdd: 10634 xref: COG0766 gene: MurA desc: UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] num: 57 28209939 29377090 16080763 15672531 73662093 20809028 15672294 57867607 28210075 28378936 15616311 22537007 16080729 29375745 56965639 55821176 15903033 22537029 81428732 55821536 56421876 19745850 23100427 19746331 25010916 15901789 42784508 57867646 73662069 15616346 15896116 76787407 81429240 15900950 15903823 76787857 23100458 18311588 24379914 15927674 56965605 42784457 56421919 46908698 70725936 15675291 15927698 70725912 78043081 46908723 15896775 24379956 25010938 52082244 52082209 20806684 15674811 cdd: 10636 xref: COG0768 gene: FtsI desc: Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] num: 109 15900267 23099986 20808371 70726365 70726735 28212082 15614457 73662513 56419648 42781332 28211689 15613974 42519496 29375573 42781722 58337774 52079898 42781738 24379075 18309333 20808321 46907666 15615135 22536471 15894530 57865868 16079555 23098920 18309546 46906695 15893621 42781594 25010351 15896915 55820692 56420990 56421081 15615136 56964126 18310862 78043714 29376969 15675531 22536929 46908275 16078581 28210767 42781599 42781597 15894529 81428945 16079785 28378803 73662899 28211295 18310845 19746581 16078462 55821675 20807382 15672849 81428359 15925745 56419649 25010840 15901508 24378943 58337115 70725092 42783399 52079996 15672321 52080119 76788293 42782168 42783009 78043919 42783010 29377325 15926764 23099385 18310751 76787444 16078580 23098919 15894528 56962703 15615951 57867077 52081212 42518894 15895399 15902348 15893797 15004853 56964127 56963482 15927132 18311122 42783506 16077481 15894965 57866680 52080118 52081036 28378274 20808078 15903560 20807707 cdd: 10637 xref: COG0769 gene: MurE desc: UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane] num: 65 73662208 29375267 56419650 58337078 28211294 15675032 20808076 55820442 42518853 70726942 20809114 76787595 78044605 28377795 15896074 28378952 55821261 73663076 15673088 81427895 29377072 15903427 15615134 46908274 28210045 18310170 15903486 56964125 25010955 18311428 42781669 52080120 28210280 15901375 15673788 18310844 19746017 15926606 23099453 22537047 78044715 15901431 42519760 24379832 16078582 15894249 42783008 57866587 76786996 23098921 15895398 52082129 20806550 15674533 19745543 15927466 56965224 22537538 58338066 18311195 81428748 57867356 25011503 24380055 70726062 cdd: 10638 xref: COG0770 gene: MurF desc: UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] num: 39 42518356 42781309 15675337 81429228 29375433 28379660 15903557 42779347 16077524 24379080 15895397 15902222 15927657 15615133 56964124 70725532 78042842 22536932 15901505 58336605 20808896 70725956 56418759 25010843 76788062 55821552 28377406 19746379 57867606 57865531 23098922 73662110 28211293 73661657 70727423 18310843 52078992 15672324 46907087 cdd: 10639 xref: COG0771 gene: MurD desc: UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] num: 36 56419653 20808074 58337117 16080643 42518896 56964122 15673572 23098924 16078584 29375575 24379029 46908272 78042842 55820797 25010591 15615130 28378801 15896442 73662897 19746474 57866690 10956448 28209980 18311441 42783006 81428361 78042912 76787986 15900589 15675424 52080122 15902647 22536654 15926766 21392954 70726733 cdd: 10641 xref: COG0773 gene: MurC desc: UDP-N-acetylmuramate-alanine ligase [Cell envelope biogenesis, outer membrane] num: 35 42783876 76787448 81428252 73662332 16080031 19745509 15927317 42519540 70726183 28209954 25011704 76786996 52081480 24380103 78044616 55820336 15903416 46907836 25010955 56421350 20808924 57867174 22537755 15615810 15674501 15901367 23099686 18311475 15896472 29376436 58337842 28378181 56964532 15674022 22537047 cdd: 10643 xref: COG0775 gene: Pfs desc: Nucleoside phosphorylase [Nucleotide transport and metabolism] num: 47 50365190 15674570 13358033 47459112 23099455 42518909 15900866 81428390 58337128 56962762 56421077 15615253 16079781 25011632 56963368 29375610 54020529 26553973 28211281 28378788 24380011 42781628 29377174 55820645 15895386 46907722 57867069 76788027 42781697 15615800 73662468 52081208 30024058 15828807 70726317 42782399 42781953 15613842 19745577 31544620 15902938 18310032 42560978 18309038 15927179 22537678 42783502 cdd: 10645 xref: COG0777 gene: AccD desc: Acetyl-CoA carboxylase beta subunit [Lipid metabolism] num: 30 18310057 15896803 56421277 56964486 52081422 28377472 57867206 76786983 42783778 15902430 70726225 28378369 28209906 15615728 15672761 55820483 16079973 22536536 23099629 15900345 24380107 29377342 46907804 73662375 15927278 81428434 78044562 25010414 15675593 19746701 cdd: 10646 xref: COG0778 gene: NfnB desc: Nitroreductase [Energy production and conversion] num: 48 15894697 46908347 25011341 15894763 15896720 46906731 52079247 15926083 78043846 42779907 23097983 73663640 81428481 76788369 70727589 15896186 42560898 46907169 57866007 15895578 24379664 15926483 15612968 67078271 15896602 58336805 15674790 42781350 15896791 15675061 28379407 42518729 73663181 23098840 22537377 42518344 15900530 70727055 58337192 18309903 57866387 58336936 16079013 28377678 19745829 15902590 15615515 19746038 cdd: 10648 xref: COG0780 gene: COG0780 desc: Enzyme related to GTP cyclohydrolase I [General function prediction only] num: 16 56419513 24379362 15614804 57866328 15926405 70727164 55820877 15901606 16078439 23099665 56963891 20807992 52079924 15903645 73663298 42780535 cdd: 10649 xref: COG0781 gene: NusB desc: Transcription termination factor [Transcription] num: 41 18310806 46907585 15615348 42783301 55821710 15895354 58337606 24380206 15927105 52080965 25011777 12044877 22537833 31544713 28211246 15672676 13357860 28378299 42519423 70726392 42560661 76787394 15900351 13507769 19746754 20807741 81428290 71894340 15828640 78044961 57867014 56420932 29375559 26553613 23099336 56964231 15675648 15902434 50365148 54020397 73662539 cdd: 10650 xref: COG0782 gene: GreA desc: Transcription elongation factor [Transcription] num: 51 25011701 15927190 18310245 16079786 12045138 24380100 15903412 15672618 28377155 73662460 20808737 15901363 70726310 58337782 42519498 23099457 19745512 26553820 55820339 42783507 15674504 22537752 39938788 47459270 42518266 28378269 29377378 52081213 28209977 42560844 15613839 76787850 56421082 50364917 15829024 15895695 46907724 81428983 18311448 56963364 31544396 13357864 78045034 57867085 28211542 15895237 15896445 13508140 54020301 71894394 58336547 cdd: 10651 xref: COG0783 gene: Dps desc: DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism] num: 18 15613581 52081552 15674007 15927713 15828628 70725896 16080117 16080351 73662054 47459377 23099088 56963229 15901415 42784237 56421396 57867640 15675430 19746480 cdd: 10653 xref: COG0785 gene: CcdA desc: Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones] num: 16 23099132 15902619 15675452 18309723 19746503 42782745 28209916 15613757 18311519 15902947 15900559 24379600 56420615 56963301 15900872 78044353 cdd: 10654 xref: COG0786 gene: GltS desc: Na+/glutamate symporter [Amino acid transport and metabolism] num: 8 28211903 73661866 28211919 15927925 23100625 23098173 70725714 57867837 cdd: 10655 xref: COG0787 gene: Alr desc: Alanine racemase [Cell envelope biogenesis, outer membrane] num: 4 57866855 73662660 15926979 70726513 cdd: 10656 xref: COG0788 gene: PurU desc: Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism] num: 8 56964545 52079809 73662260 16078376 12045226 15615827 23100148 56420271 cdd: 10657 xref: COG0789 gene: SoxR desc: Predicted transcriptional regulators [Transcription] num: 7 16080756 67078092 15616608 46907346 15896746 81428649 56965842 cdd: 10659 xref: COG0791 gene: Spr desc: Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane] num: 16 15672520 18310114 28209994 20807361 15673041 16080639 15672918 52082125 29376820 18310336 42784346 18309260 15615569 10957133 15673361 15672466 cdd: 10660 xref: COG0792 gene: COG0792 desc: Predicted endonuclease distantly related to archaeal Holliday junction resolvase [DNA replication, recombination, and repair] num: 5 28210942 20807899 78044934 15895040 18310687 cdd: 10661 xref: COG0793 gene: Prc desc: Periplasmic protease [Cell envelope biogenesis, outer membrane] num: 32 57866912 15616161 46908083 52082056 20808378 20808720 15893790 20808716 29376233 28212088 42519030 20807629 15927001 56421707 20806915 56964826 73662628 20808719 28378519 70726487 78042870 18309283 23099945 56421627 28210595 52080651 42784334 42560666 16080577 20808962 42560829 16079017 cdd: 10662 xref: COG0794 gene: GutQ desc: Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane] num: 13 23100262 73663456 73662927 57866143 15926249 52081156 15893688 70727418 28210619 56965116 46906747 23100159 16077414 cdd: 10664 xref: COG0796 gene: MurI desc: Glutamate racemase [Cell envelope biogenesis, outer membrane] num: 37 15926734 15896495 55820352 57866660 78043344 25011689 15674511 15615633 16079891 42780015 18311550 56421203 70726812 15903738 19745519 73662954 15673264 29375697 42518578 20807679 16079734 23099563 52081340 42783635 28210023 20806735 46907456 24380092 28210162 28378862 81428019 58336762 22537740 56964421 15901709 20807090 76787427 cdd: 10666 xref: COG0798 gene: ACR3 desc: Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] num: 15 18450321 78045129 78043053 56419123 42782263 56962410 56421758 16079632 73663195 44004498 15004807 18450320 67078360 42781061 42518316 cdd: 10668 xref: COG0800 gene: Eda desc: 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] num: 17 29375056 56964900 15900249 56962299 29376770 15674710 52082359 15896226 15902331 15616285 67078202 15673608 56420491 19745738 25011933 22538045 15893685 cdd: 10669 xref: COG0801 gene: FolK desc: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism] num: 16 15675083 15612658 15896180 15902313 15673136 15900226 52078574 15926193 46906459 24379413 25011231 76787503 22537271 56418606 18310004 19746051 cdd: 10670 xref: COG0802 gene: COG0802 desc: Predicted ATPase or kinase [General function prediction only] num: 39 42779359 81428953 28377659 15903803 29375534 42560859 42779360 15927627 15896093 76787736 15828591 71894038 20807036 19746636 50365312 42518810 23098100 15675584 28212028 56962642 70725982 47458967 56418771 52079047 58337026 57867556 46908314 25010427 16077658 15613108 18311146 55820430 24378902 78043152 15901768 39938986 22536549 15672415 73662135 cdd: 10672 xref: COG0804 gene: UreC desc: Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] num: 9 55820378 13357995 15612817 15927870 73661572 56420465 16080717 42782712 57867797 cdd: 10674 xref: COG0806 gene: RimM desc: RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis] num: 34 46908025 16078665 15926822 42519386 23098990 25011467 50365358 56964055 22537502 15615043 15673547 19745922 15902730 29376428 15895034 76787824 42782934 20807906 18310692 56419735 42560961 28378336 55821405 15674881 24379321 58337564 28210936 57866698 70726676 52080204 78044794 15900672 81428332 73662837 cdd: 10675 xref: COG0807 gene: RibA desc: GTP cyclohydrolase II [Coenzyme metabolism] num: 22 28210397 15672977 23097879 76787663 15614119 15902206 67078031 57867216 15927343 56420830 22536912 28378159 25010824 15893881 73662306 16079383 18309550 42783227 15900113 56963577 52080841 70726156 cdd: 10679 xref: COG0812 gene: MurB desc: UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] num: 34 28377664 73663287 20808252 23098011 25011230 24379414 56419453 28212078 76788612 29377210 15615127 42783003 57866357 81428948 56965729 42784258 58337028 16078587 22537270 18309335 46907648 42518812 29376981 52080125 15926415 15675084 70727152 19746052 55821515 15903290 15893801 15673144 15901244 78044048 cdd: 10680 xref: COG0813 gene: DeoD desc: Purine-nucleoside phosphorylase [Nucleotide transport and metabolism] num: 39 22537336 15925840 55821125 12044899 23099800 29374835 15674918 26553558 28211066 42561357 47459370 76787784 15902782 15672913 15829116 46908088 71894460 52080655 56420115 54020132 25011300 16079021 57867639 13357841 20808171 15927712 31544790 55820630 56965779 70725897 13507801 19745961 15900722 73662055 24379651 81428410 42780662 50365480 18310380 cdd: 10681 xref: COG0814 gene: SdaC desc: Amino acid permeases [Amino acid transport and metabolism] num: 4 42782469 56965254 81427767 28377393 cdd: 10686 xref: COG0819 gene: TenA desc: Putative transcription activator [Transcription] num: 27 18311528 73662098 15615242 15900619 22537003 15673761 15900613 57867633 29377241 16078230 52079668 81428705 15927669 56962530 70725941 56419153 15902678 23097930 42779872 56962443 25010912 52082486 15902672 46906553 76788322 23098096 42781688 cdd: 10687 xref: COG0820 gene: COG0820 desc: Predicted Fe-S-cluster redox enzyme [General function prediction only] num: 32 76787054 46906726 18310722 78045218 16078638 15900662 25010575 56962424 73662863 24379004 15615069 42782956 13357773 70726698 15894473 15895003 23100552 26554015 55821670 15926801 57866756 15902720 29376559 22536637 15672161 28210911 52080178 19746482 20807945 56962848 15675432 56419709 cdd: 10689 xref: COG0822 gene: IscU desc: NifU homolog involved in Fe-S cluster formation [Energy production and conversion] num: 45 15902818 81428719 70727037 56421527 42519067 73663167 42561037 13508227 71894337 28378188 42784163 39938586 22536329 12045196 52080348 15828645 29376888 20809013 13358016 46908583 15896537 15926505 47458913 52081753 15616030 26554198 30024055 15900753 25010215 16080320 15612932 50365065 19745417 23099832 31544484 54020393 15895825 56964739 39938953 24378759 15674463 18310215 57866420 76786960 55820265 cdd: 10691 xref: COG0824 gene: FcbC desc: Predicted thioesterase [General function prediction only] num: 40 18310196 15926931 56420278 57865366 56964426 42783688 67078244 23098453 52080427 73661863 56420405 16079894 50812241 23099566 57866858 23099139 73661648 46907508 70725524 73661759 15893563 56420097 73661566 15615652 70726558 15895284 15928116 15614851 70725711 23098133 15614562 73662716 20808231 57865718 56420525 15927928 42782676 24379252 52081344 56963917 cdd: 10692 xref: COG0825 gene: AccA desc: Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] num: 31 76787996 46907803 18310058 70726226 15615727 15675592 52081421 22536537 73662376 56421276 15927277 25010415 16079972 23099628 29377341 28209906 28378370 81428435 56964485 55820484 15672762 24380106 42782584 15896802 28377473 42783777 57867189 15900346 78044709 19746700 15902431 cdd: 10694 xref: COG0827 gene: COG0827 desc: Adenine-specific DNA methylase [DNA replication, recombination, and repair] num: 31 56421321 13507847 81428910 24380323 73662362 15615755 25010241 15674331 18450290 55821830 58337054 42518836 76788668 19745287 57867224 16080000 15901866 70726214 23099647 29376809 28378841 52081439 42783820 15927289 22536351 46907813 13507850 15673996 15903897 15896770 56964506 cdd: 10697 xref: COG0830 gene: UreF desc: Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones] num: 8 57867799 15612819 42782710 13357993 15927872 55820380 73661570 56420463 cdd: 10700 xref: COG0833 gene: LysP desc: Amino acid transporters [Amino acid transport and metabolism] num: 37 76786748 58337017 56418721 15896412 16080990 15927260 73661498 25011420 16077309 46907029 16081085 15674175 16080828 15896590 73662742 42782090 70726245 28378053 24379394 57866816 42779627 55820662 42779789 15926914 81429429 52078871 22537453 73663482 52078719 73662392 15672348 42782160 70726575 18310148 42779851 57867164 28377818 cdd: 10702 xref: COG0835 gene: CheW desc: Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms] num: 20 28211380 20807596 15615531 15895492 23099997 56964346 46906940 52080002 15614825 16078465 56420881 56963907 15893415 28211387 42780850 15894516 20807513 78044189 15895485 15614275 cdd: 10703 xref: COG0836 gene: {ManC} desc: Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] num: 7 18309477 15896309 15896323 15896221 56421839 28210028 18311290 cdd: 10707 xref: COG0840 gene: Tar desc: Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] num: 61 42784226 20807243 52078865 52080553 42781154 15895809 56418904 15894196 78043972 78042826 56419555 15616465 15896003 28210223 22537764 28211474 15896595 76786986 15893734 15896029 28210600 15896019 20806957 56421907 15896076 28210635 15614838 15896714 42784227 28211206 15896488 67077905 28209944 42779698 15896748 28210992 25011711 42784197 78043413 15894857 15894666 28211515 15893832 23100184 56962237 46906974 28211184 15614390 28211477 28210662 15893416 20808606 15894878 16080178 20808196 28210899 20807169 15896747 52081614 15894092 15893833 cdd: 10708 xref: COG0841 gene: AcrB desc: Cation/multidrug efflux pump [Defense mechanisms] num: 9 15893661 23100395 73661961 70725792 42779865 57867742 56421104 15927841 15616378 cdd: 10709 xref: COG0842 gene: COG0842 desc: ABC-type multidrug transport system, permease component [Defense mechanisms] num: 67 15893464 42784529 46907159 56418743 15896513 20808884 22536443 50365420 70727613 56420210 70726589 56962822 16077899 15901825 20808883 78044400 23098528 28379260 52082288 15893530 52082287 42780936 15926901 15894122 19745836 15896644 28379357 25010325 15896844 15672237 15893534 16077900 15893535 15893465 15896843 42781605 76787642 15893529 56963201 15903858 15674797 56962821 15613619 56963246 15896184 56419444 56964950 57866788 22536493 25010371 52082578 81429412 70725083 16080461 15896183 42780937 15613618 24378747 15614662 23098527 56963200 73661443 46907213 42779294 76787673 73662757 78044713 cdd: 10710 xref: COG0843 gene: CyoB desc: Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion] num: 23 23098893 73663040 42783038 56963901 70726903 56421993 56420081 16080867 57866537 52082325 15615177 23099201 15614628 16078554 15613302 15926646 56420206 52080093 42779849 23099709 46906240 56419618 56964157 cdd: 10711 xref: COG0845 gene: AcrA desc: Membrane-fusion protein [Cell envelope biogenesis, outer membrane] num: 39 73663411 46906425 57865961 15896515 78044152 19746919 19745912 70727279 20807655 42779966 24379316 78045114 29375051 22537508 15616234 15893436 15893610 15900678 42784419 76788685 18310524 15675807 15674871 78043593 25011473 52080035 20806777 23097616 29377450 15902737 15893955 23100396 56964457 16080382 23097644 16078499 20808030 15615685 15925901 cdd: 10712 xref: COG0846 gene: SIR2 desc: NAD-dependent protein deacetylases, SIR2 family [Transcription] num: 13 42561061 15828913 25011142 58337907 15675179 54020455 15926028 42519677 76786817 70725265 22537215 19746148 16078030 cdd: 10713 xref: COG0847 gene: DnaQ desc: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] num: 53 19745746 70726458 58337449 15894025 56965684 57867358 24379729 73662598 52080748 55820864 46908132 56963828 28378418 15675683 78044638 25010639 81428523 18310383 15616394 15902755 16079297 57866955 70726060 22536702 81428950 15674717 42518811 56419989 13357669 42519127 76786927 56420711 15673814 15614254 15927468 15672964 28377661 18310648 29377213 15927574 15900868 15900695 73662206 58337906 42780745 58337027 15927036 15902940 19746791 29376872 15616303 23098512 23099217 cdd: 10715 xref: COG0849 gene: FtsA desc: Actin-like ATPase involved in cell division [Cell division and chromosome partitioning] num: 39 28210818 81428364 15615122 28378798 46908269 15926768 58337120 15673852 24379032 42518899 78043549 20808393 15894969 42783000 70726731 56964119 16078592 56419659 20808067 52080130 15675421 23098927 15894300 76787282 15901502 55820800 28210691 23099683 15903554 57866692 22536657 25010594 29375578 19746471 73662895 15615805 15894444 18310748 78044602 cdd: 10724 xref: COG0858 gene: RbfA desc: Ribosome-binding factor A [Translation, ribosomal structure and biogenesis] num: 39 56419800 54020613 15829143 15895079 56963991 29375844 13507895 78043533 28210962 13357881 24378915 57866760 25010491 15900469 71894106 15926853 15614974 46907553 50365189 42560882 47458988 81428858 58337533 70726645 15675570 39938637 42519358 76788091 12044995 15902526 73662804 19746622 22536565 31544320 15672750 55820438 28378672 18310667 26553566 cdd: 10726 xref: COG0860 gene: AmiC desc: N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane] num: 62 23100367 42780060 52080951 56965057 78043744 52078647 15616072 28211207 52080352 15612802 70726290 23098309 56421790 15927212 81428472 56965210 15613529 46907749 78044589 42780958 28210121 28212146 56421689 28211710 28378624 20808594 28210024 56963840 16079812 16078804 23100540 56964579 23097650 42781906 52079443 57867127 18309097 78044631 56418744 15616227 56962701 18311349 42779227 15613858 16077221 15896343 56418677 52082098 15613857 28210714 56961974 16079475 23100596 15613373 18310387 23097675 78044767 46906369 16080615 20808785 73662436 52081237 cdd: 10727 xref: COG0861 gene: TerC desc: Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism] num: 30 56419145 15894326 42782042 15926609 52078809 57866597 16078216 56418921 16077361 42780384 70726938 81429249 15615423 42780496 56962532 28379085 46907224 52079648 56419353 15894694 15615116 46907223 73663073 23100622 23100491 42779596 42518176 52079891 58336462 56963606 cdd: 10728 xref: COG0863 gene: COG0863 desc: DNA modification methylase [DNA replication, recombination, and repair] num: 13 15674743 81427756 42779473 19746425 29376623 42561467 76786905 29376019 15616097 24378989 28211560 25011171 19745777 cdd: 10729 xref: COG0864 gene: NikR desc: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription] num: 10 20806771 42779354 16077532 46907120 23098077 78042806 15893784 56418767 15613084 20808551 cdd: 10730 xref: COG1001 gene: AdeC desc: Adenine deaminase [Nucleotide transport and metabolism] num: 18 16078516 56418806 15613200 56420524 81429282 52079144 56420633 52080052 56962849 15613203 56962851 46907972 78044033 78042715 15894174 81427701 28379685 16077724 cdd: 10732 xref: COG1003 gene: GcvP desc: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism] num: 14 57867045 56420958 52080991 70726382 23099357 15615377 73662529 15927115 78044158 16079511 20806814 46907576 56964258 42783349 cdd: 10733 xref: COG1004 gene: Ugd desc: Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] num: 24 15674641 16080138 73661377 16080676 56964931 16080611 15902362 23100384 19747033 42784430 19745664 56421789 15616270 42784353 18309476 21392813 56419375 15675934 47459436 10956342 23100339 52082094 56965448 15902183 cdd: 10735 xref: COG1006 gene: MnhC desc: Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism] num: 17 15613880 57866280 16080214 23099448 73663134 15926301 52081657 28211023 23100562 70727002 46908553 15926539 57866493 73663403 56962563 56963398 70727272 cdd: 10737 xref: COG1008 gene: NuoM desc: NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] num: 4 42784461 78043184 78043816 56421881 cdd: 10738 xref: COG1009 gene: NuoL desc: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] num: 29 56962561 15926541 42782246 20808127 70727000 16080212 15926299 70727274 70727560 15613882 16077251 73663132 52079278 56418977 15926130 23100564 57866495 52081655 20806652 78044040 57866278 73663405 56421882 57866051 46908551 73663689 23099446 56963400 42784462 cdd: 10739 xref: COG1010 gene: CobJ desc: Precorrin-3B methylase [Coenzyme metabolism] num: 6 28210459 46907418 78042730 18310202 15894661 56420340 cdd: 10740 xref: COG1011 gene: COG1011 desc: Predicted hydrolase (HAD superfamily) [General function prediction only] num: 63 15615534 73663417 15673828 15893759 52081396 42782415 73662905 15673499 55821812 18309744 29375410 28378687 29377162 16077800 15614718 56962682 15675058 25010827 15674680 22536915 57866674 24379233 28379344 52078684 81427765 23100082 70727286 15895052 55821310 57866248 55820763 76787354 42784582 58336675 58337360 15926758 78044199 46906880 28379308 15613036 70725453 19745707 73663213 16079946 73661676 46906497 58336400 28211556 56965028 15896815 42518109 42783986 23098387 81428061 42781804 56963697 15901036 42519056 24379667 70726741 15903101 15926289 15672092 cdd: 10741 xref: COG1012 gene: PutA desc: NAD-dependent aldehyde dehydrogenases [Energy production and conversion] num: 105 19746036 26553922 42519654 13357922 22537282 56420454 16077459 46907148 15900986 15613568 15675303 18311513 42779437 55821268 16080934 26553843 52082572 73661497 25010896 42783567 19746343 46907864 18311292 15927696 15614573 58337891 52078922 15903879 56963051 46907383 15613428 28379962 57867597 56962111 31544915 24380458 28379505 26553863 15927494 42781386 50365075 29376183 76787506 70725501 15925852 28377012 23100162 70725914 42783499 23097677 70725215 42780471 73662071 81427993 18309884 31544339 28211045 71894102 57867406 15675059 24379149 52082295 15903072 28211118 24378663 25010128 70726034 42519642 42780016 28377249 73662180 23097939 56961806 29375484 16080847 15004865 15614301 28211781 15901847 16081037 57866324 19745237 22536238 23100694 42561044 18311420 15614800 28212102 76788492 22536987 57865504 76787931 23100318 15674137 15896890 58336794 46907399 52079189 16077802 15928133 57865574 15004739 23099312 25011241 15615878 cdd: 10742 xref: COG1013 gene: PorB desc: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] num: 26 15895497 15672404 70726624 46907060 42782858 15895764 78043485 20807665 28212104 28210852 28211392 18311043 57866795 29377046 78044234 20807441 29376666 78043364 56419837 73662784 20807788 20806954 78044112 15926873 15614936 15895723 cdd: 10743 xref: COG1014 gene: PorG desc: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit [Energy production and conversion] num: 15 70726625 20808575 78044588 42782859 57866794 78044403 78044852 15926872 15895724 20807442 15895270 56419836 28212107 73662785 15614937 cdd: 10744 xref: COG1015 gene: DeoB desc: Phosphopentomutase [Carbohydrate transport and metabolism] num: 39 76788229 56420849 25011304 76787408 81428409 20806971 25012061 19745958 52080867 56963548 15895335 47459154 24379657 56962452 46908188 29374833 55821132 18309370 15925843 15672911 28211067 15613155 22538204 15902776 15828748 73662058 57867627 54020398 16079407 23099301 15900716 15614093 22537340 52079157 42783202 71894107 78044235 70725900 15674915 cdd: 10745 xref: COG1017 gene: Hmp desc: Hemoglobin-like flavoprotein [Energy production and conversion] num: 13 73663719 73663037 23097746 56962130 70726900 18310935 15925943 16078369 57866249 15613621 56420272 52079418 42780645 cdd: 10746 xref: COG1018 gene: Hmp desc: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] num: 14 18309760 73663719 73663037 23097746 56962130 70726900 15925943 16078369 57866249 15613621 56420272 52079418 23097700 42780645 cdd: 10748 xref: COG1020 gene: EntF desc: Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] num: 28 24379754 50812237 52078850 16077417 16078895 73663735 58338169 24379753 23098413 24379752 15925883 42781465 16078894 15673243 52082185 24379751 16078893 16077418 42783827 50812234 16077420 16078892 52078851 28377459 52078849 50812288 16078891 57865675 cdd: 10749 xref: COG1021 gene: EntE desc: Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] num: 6 16080251 23098411 42781463 25011787 52082187 78045072 cdd: 10751 xref: COG1023 gene: Gnd desc: Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] num: 9 15674167 16079626 42782463 29377596 26553878 81427912 42781368 28378019 15615237 cdd: 10752 xref: COG1024 gene: CaiD desc: Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] num: 71 23098272 52081771 52080474 56420137 15925935 23099153 52080512 15616386 23100123 56963575 20807045 18309077 42784190 23099575 15616050 42783697 15675604 24380118 15895969 28210227 42781613 15895286 56421314 78044907 56420573 15614412 78043925 23098137 56420449 22536525 56965669 15612764 15615663 50812208 56964436 15900334 78044324 73663733 42781447 42780055 15613698 78044173 23099850 15895282 15614559 56420574 56963274 76788571 52079473 15612770 56419641 16078883 56420527 52080473 19746712 55820472 56420220 16079906 56421223 52081355 56421543 16080336 15612765 15615145 25010403 18311283 56964754 78044975 78043648 15902419 28212012 cdd: 10754 xref: COG1026 gene: COG1026 desc: Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] num: 4 18310384 15894931 28210527 15896258 cdd: 10755 xref: COG1027 gene: AspA desc: Aspartate ammonia-lyase [Amino acid transport and metabolism] num: 12 28210541 52082425 20807295 28379306 42779755 15613989 42780941 56963497 52078975 15893566 15894929 16079414 cdd: 10756 xref: COG1028 gene: FabG desc: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] num: 81 24378871 73661885 50812237 15613069 20806584 15894854 70726634 15613363 56963249 52078793 46906920 16078107 56965382 46909004 46907919 23100930 52079424 57866778 50812234 23099073 55820968 16078010 56965147 73661610 57867738 57867805 57866168 81427775 29374729 56964499 23099177 73662839 52079524 56419248 28210515 52079598 57865439 23100735 57865575 16077352 23098641 16078104 18311562 15894702 52078952 18311580 15612973 42779895 20808207 70725439 42779275 28378617 42518761 42781001 15927908 73661745 15614406 58336985 16077931 28211048 42782408 29376320 15928051 23098567 28379252 56419579 15612879 50812235 15614074 28379469 15613630 56965375 28379461 56962879 70725728 81428068 46907622 81428098 16077486 56961790 70725499 cdd: 10758 xref: COG1030 gene: NfeD desc: Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] num: 11 15613968 56963477 73662491 56963436 52081086 15927154 57867023 70726343 16079593 15613919 23099415 cdd: 10760 xref: COG1032 gene: COG1032 desc: Fe-S oxidoreductase [Energy production and conversion] num: 20 15894536 28211683 56419477 78044301 15615514 44004505 20807390 26553953 18310627 15894308 18311115 78043713 28210698 15894357 15895280 20807472 28210571 15673150 15895688 18310178 cdd: 10761 xref: COG1033 gene: COG1033 desc: Predicted exporters of the RND superfamily [General function prediction only] num: 4 15613283 56965818 42783943 23097802 cdd: 10765 xref: COG1038 gene: PycA desc: Pyruvate carboxylase [Energy production and conversion] num: 17 28378755 28211826 15926699 70726839 46907300 56964160 29376950 42783042 56419614 15672651 23098885 52080089 57866651 15615188 73662984 16078550 15895918 cdd: 10766 xref: COG1039 gene: RnhC desc: Ribonuclease HIII [DNA replication, recombination, and repair] num: 31 54020259 24380229 13507857 57866643 70726822 15900322 81428005 12045051 56421232 15828771 71894629 15902409 39939117 23099583 55821737 47458958 15675667 19746773 13357958 31544611 42783728 46907447 16079914 22537861 76787270 29375836 52081363 15674239 25011806 15926724 73662964 cdd: 10767 xref: COG1040 gene: ComFC desc: Predicted amidophosphoribosyltransferases [General function prediction only] num: 33 23099971 55820462 57866378 16080598 52082080 78044328 42784344 20806995 29376313 18311155 15904053 58336993 15675493 73663274 81428106 22536520 15673071 15616187 25010399 28377597 70727139 15902014 15896106 18450300 56964847 46908684 42518769 76787424 15926428 24378983 19746541 28210084 56421681 cdd: 10771 xref: COG1044 gene: LpxD desc: UDP-3-O-[3-hydroxymyristoyl] num: 5 28211864 20807146 15925860 15612774 52079233 cdd: 10772 xref: COG1045 gene: CysE desc: Serine acetyltransferase [Amino acid transport and metabolism] num: 38 15673835 19746857 57866106 15612673 18310303 56418619 76788450 56961910 52080953 55820895 15675746 23097553 78044375 55820185 25010275 42779169 28377180 25011283 20808682 46906471 70727479 73663536 56421844 16077161 55821115 15926206 15893975 24378672 18309456 28210108 15902561 76788506 22537317 52078588 29374702 22536389 15900498 56421657 cdd: 10774 xref: COG1048 gene: AcnA desc: Aconitase A [Energy production and conversion] num: 15 46907870 16078863 56419882 73662717 24379143 23099136 15672653 52080422 57866857 56963922 70726559 57596593 15926930 42782685 55821273 cdd: 10776 xref: COG1051 gene: COG1051 desc: ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] num: 72 23100920 42781776 15895053 25011317 15673138 42782694 19747020 20808200 42781867 24379819 42781182 15673603 22537353 29376149 16078284 58337475 42519150 46906733 15901504 28377729 57867274 28379061 81428707 56420317 42782021 28378574 42779676 15903556 58337347 18309653 56962628 42784109 15903158 42782498 15673103 29377180 15673901 23098696 18309940 56421487 46907482 15900061 76788609 52082615 42518985 52079300 28377735 42519057 15900635 42783275 15894293 42781353 55820515 15675921 23097840 56962062 42781140 42782423 42779769 15673877 52080610 15902167 15672204 15615651 23098382 73663598 15672146 46908539 15901097 28377068 67078133 15902694 cdd: 10777 xref: COG1052 gene: LdhA desc: Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] num: 60 20808347 73661604 70725071 57866453 15896198 73663702 42560594 15928103 15895949 70725494 23099812 52081721 42784088 29376798 26553718 76786808 28377638 52082350 57865495 70727024 76788524 23099741 23098172 15927885 28211478 56961874 15925881 33416269 28377711 73663154 25011886 15928138 56420489 28378688 18309512 70725753 25010723 16080521 15675142 20808350 57865587 57867831 42518131 23100303 46906317 73661915 15926519 28210561 56421500 22536859 58337241 52082012 22537945 15894821 70725546 42780609 29377595 15615876 58336405 56962002 cdd: 10778 xref: COG1053 gene: SdhA desc: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] num: 33 16079896 28211164 24378694 56964428 15673106 28379534 57866658 56421207 42783690 52081346 78044665 78044117 18310413 57865762 70726814 56962403 28211192 15926732 73662956 28211484 28377901 23099568 46906596 28378151 58337211 58336413 42519274 78044723 28210528 29377044 28379807 15893400 15615654 cdd: 10779 xref: COG1054 gene: COG1054 desc: Predicted sulfurtransferase [General function prediction only] num: 21 57865780 15673199 73661436 19745979 15902128 29375342 23098027 15674936 46907612 76786765 56964419 55820627 16077302 25011546 42781030 52081875 39938571 70725300 15928275 22537580 15900038 cdd: 10782 xref: COG1057 gene: NadD desc: Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] num: 45 15674475 76787059 13358032 28378242 19745430 29377337 15828806 16079618 46907716 25011746 15901579 18311107 20807399 26553972 57867064 15927174 58337795 70726322 22537802 81429001 15672207 15673081 55821595 42560977 78043476 50365191 56421057 15613889 47459111 52081114 15895057 56963405 71894335 42783459 13508075 12045095 73662473 15894544 15903634 23099440 54020530 28211675 42519512 31544621 24380163 cdd: 10783 xref: COG1058 gene: CinA desc: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only] num: 27 15903800 70726630 19746984 25012086 15926867 56419829 52080298 57866789 15675867 78044017 28210113 15614948 20807822 55820161 24380420 23099078 46907625 15901765 42782865 56963966 76788203 28378888 18309114 29377622 16078756 73662790 15896820 cdd: 10785 xref: COG1060 gene: ThiH desc: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] num: 15 28211398 20807997 15615973 15896174 15894635 78045152 18310582 78045075 28211009 56964697 18309092 78044724 15615705 56964464 78042688 cdd: 10786 xref: COG1061 gene: SSL2 desc: DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] num: 30 15674735 81427757 56963611 26554010 23099269 58336806 76787074 50365130 58336778 55821363 42518123 15896079 15928068 70726431 15900485 55820757 58336408 15828549 54020147 28210383 81428631 15828950 15928067 56420639 56962313 29377665 57865446 28211544 19746262 15926398 cdd: 10787 xref: COG1062 gene: AdhC desc: Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] num: 9 23100256 15614574 81428154 57865900 56421309 73661546 70725374 28379475 24378639 cdd: 10788 xref: COG1063 gene: Tdh desc: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] num: 87 28378485 56965331 28379856 15903907 16077691 56419473 20808020 78043661 26553914 15901130 52079753 15901875 52080305 46909025 16078762 57865412 73661675 56965376 46908842 56962017 70725216 42519046 19746061 23100205 46907312 24380224 81428536 15896617 15673531 15612750 58337404 15903712 15614514 16078298 15903191 56965106 57865543 28379339 42782303 22537777 15612752 46906751 16079750 16077682 73661833 56965104 15901683 23100808 16081077 56962404 70725606 20808768 30024012 56965838 42782200 73662932 15925955 56962218 76787263 15925953 15614392 56965190 73661664 52079756 15616511 73663488 22536611 20807182 67078218 42779820 28378356 23100270 56965175 15675093 42519061 56962813 55820974 15925959 57866164 23100713 70725523 13508303 23100207 15925951 52082121 46908843 25011724 cdd: 10789 xref: COG1064 gene: AdhP desc: Zn-dependent alcohol dehydrogenases [General function prediction only] num: 22 15900219 25010129 81429314 15674284 56419266 15673789 23098241 16079755 56961828 26553975 52080468 76786859 15613101 42781360 55820923 29376369 19745238 22536239 15926283 15902306 23100693 57866229 cdd: 10790 xref: COG1066 gene: Sms desc: Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] num: 30 15926203 20808691 81429295 24378825 15674421 78044393 16077155 25010184 55821795 15902069 15674046 23097549 42779163 57866103 76787306 52078582 15612667 22536295 28377483 70727482 73663539 29374698 15896436 28212199 42518491 58336684 56961904 56418614 19745372 46906466 cdd: 10791 xref: COG1067 gene: LonB desc: Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones] num: 18 28211304 56964400 78044943 20808190 15895404 18311033 18311617 28209884 28211965 56421186 78043822 42783608 15615613 52081304 15896947 18310373 15895896 16079873 cdd: 10792 xref: COG1069 gene: AraB desc: Ribulose kinase [Energy production and conversion] num: 9 73661872 56962187 56420440 52081381 73663487 15926230 15614435 57867823 16079931 cdd: 10793 xref: COG1070 gene: XylB desc: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] num: 55 15674166 28379902 28378018 56420409 15894623 29375065 81429469 46908891 46909037 29375174 42781366 16081058 76787638 56420476 15615319 42781276 23100254 56962154 52082569 15895870 56963765 70725537 70725576 29377679 16078916 15928085 42518498 52082335 81427913 57865515 52080437 23100644 73661720 15614114 18309299 57865459 28379866 52081861 58336692 25011883 16078824 20808346 15904014 15901977 23097950 42782460 23100573 16080172 22537942 15615239 56962349 42782073 70725209 15673490 73661674 cdd: 10794 xref: COG1071 gene: AcoA desc: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] num: 65 20806712 42781861 15614385 46907284 81428695 73663005 56420562 15613339 42783068 56964185 54020423 15672044 56964550 16079461 57866606 23100332 57865798 52079281 57866998 22537041 50364854 56420913 73662547 31544689 52080059 56419245 15675025 55821076 24379826 13508132 29375920 56964216 16078522 15901029 15903095 56419593 70726399 71894294 56421752 15615326 23099321 19746010 24378645 23098867 76788339 52080943 42783280 25010949 29165620 15927098 42560813 70726860 39939086 15615218 29376214 70725225 26553960 16077873 20807175 15612776 12045130 28378767 15829235 47459419 46907598 cdd: 10795 xref: COG1072 gene: CoaA desc: Panthothenate kinase [Coenzyme metabolism] num: 20 15675195 15673426 42519706 24379558 19746164 28377743 76787591 15902785 52080903 25010993 29374818 50812263 81427748 58337927 46907157 55820851 22537112 15615438 15900726 56964304 cdd: 10796 xref: COG1073 gene: COG1073 desc: Hydrolases of the alpha/beta superfamily [General function prediction only] num: 47 52079245 15896898 15615480 46908310 22536293 52079613 50365131 28378438 76787607 29376072 28379729 58337044 28379634 25010182 29376100 15672103 28377361 52080883 19746814 56964333 50365422 56964644 81429030 23098650 23098529 56420028 29377264 28379141 58336955 81428880 42783221 56965087 28379149 46908495 15896274 73662283 15673556 56419283 42519484 20808226 16078179 18311294 15895982 15675706 23098378 16079421 42780286 cdd: 10797 xref: COG1074 gene: RecB desc: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] num: 33 76787847 18309003 70726984 20806785 55821688 42519128 29375689 22537037 25010945 58337450 15615542 46908500 81428521 23098637 28379194 15901017 15903084 57866488 19745861 15674822 15895530 56419918 56419217 28210435 73663117 15671986 42780319 24379891 52079565 78043588 16078127 15926556 56964348 cdd: 10798 xref: COG1075 gene: LipA desc: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] num: 19 28210658 15926022 15614459 16077339 57865673 56420521 42781284 15829166 73663604 73661811 16077902 15928257 15894315 56964760 57865740 57865971 57865775 70725169 42781684 cdd: 10801 xref: COG1078 gene: COG1078 desc: HD superfamily phosphohydrolases [General function prediction only] num: 42 52082009 56421946 15673058 13358163 16077645 58336571 50365465 56965083 22536691 15674697 25010627 46908736 15926281 39939216 52082269 56965665 76787909 42784553 15901150 16080812 42560686 31544916 56961830 28377371 42518306 73663424 19745725 12045320 46906721 15616380 24379187 15613209 15614374 13508416 42780288 29375719 26554483 57866207 70727326 81429246 23100475 15903212 cdd: 10802 xref: COG1079 gene: COG1079 desc: Uncharacterized ABC-type transport system, permease component [General function prediction only] num: 34 55820862 26554039 22537118 20806968 31544791 54020272 15893993 15673312 13507999 19746158 16080209 28210128 15900735 15675189 42782873 78044613 15829088 15902794 56962864 58338187 13357569 12044973 42560568 25010999 56419821 50365481 47458874 76787083 71894162 23100840 18310559 24379550 46907619 29374830 cdd: 10803 xref: COG1080 gene: PtsA desc: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] num: 41 55821269 31544284 25010895 47458896 15926670 13508366 15901041 18311339 15829073 24379148 81429071 42560821 23099887 28378036 56419531 54020212 29375307 56964423 70726875 50365336 15675304 46907235 26553997 42518742 15615635 58336965 19746344 22536986 50812224 28211419 73663016 20808700 42783162 15896338 76787063 52079988 15672100 71894534 57866581 15903106 12045289 cdd: 10804 xref: COG1082 gene: IolE desc: Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism] num: 50 56962571 46908395 15903007 46907112 56965043 46908468 28378850 56965199 46909024 56420427 73662641 20808353 56965230 23100687 15925923 56420425 15614873 56962569 52082525 28210308 29375070 52082524 81429101 23100855 16081019 15896736 23100874 28379875 15895900 20808352 16081020 28210416 28379817 16077894 56962144 15674635 56420646 15614878 46908393 56962161 15615908 56962118 23100018 19745657 56965048 15613812 73662640 18310377 56963717 28210866 cdd: 10807 xref: COG1085 gene: GalT desc: Galactose-1-phosphate uridylyltransferase [Energy production and conversion] num: 9 22537892 58336912 58338093 42519798 28378473 42779322 25011836 15672818 76787956 cdd: 10808 xref: COG1086 gene: COG1086 desc: Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] num: 13 15616280 15902136 15616213 15895462 15925857 18309445 15900287 70725393 28211868 15900046 20807159 52080575 28211366 cdd: 10809 xref: COG1087 gene: GalE desc: UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] num: 52 13507996 58337735 22538061 24379341 56420684 76787748 52082327 52079688 42561494 55821387 55821178 15903503 15894708 42519635 42561487 52082565 15901447 81428379 28210582 52082470 15896213 18309491 76787113 56965580 78043738 29375648 29377255 42561501 56421831 28379797 15613671 18309268 28377576 73661939 46908649 81428889 12044970 55821362 15901657 15903689 42518778 15673961 16080937 15901695 20808331 42784426 42784633 42784425 25011949 24380401 47459028 15903725 cdd: 10810 xref: COG1088 gene: RfbB desc: dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] num: 21 15895599 81429104 15672180 29376700 25011320 15674955 15615926 55821249 16080834 23099875 19745997 18309601 76788555 24379855 22537356 42780411 15902366 42518974 28377963 78043771 56965451 cdd: 10812 xref: COG1090 gene: COG1090 desc: Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] num: 12 73663230 46907925 56418986 52079309 16077918 70727120 15616451 23098347 15926446 42779650 56963075 57866423 cdd: 10813 xref: COG1091 gene: RfbD desc: dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] num: 21 29376699 50812302 42518977 23098583 15615927 28377964 15672181 22537570 25011536 56965450 15004825 18309600 55821460 24379279 15895582 78044837 76787170 15902367 42780412 15674829 19745868 cdd: 10814 xref: COG1092 gene: COG1092 desc: Predicted SAM-dependent methyltransferases [General function prediction only] num: 25 76787301 15926667 42783711 15672238 70726878 46906826 15674850 15901232 20807963 29375834 18311530 16080887 57866578 19745889 56965712 55820716 24379235 23097913 52082348 28379051 73663019 15903279 78043572 25011492 22537527 cdd: 10820 xref: COG1098 gene: VacB desc: Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] num: 48 15896453 56421462 18311456 15926544 56418591 19746545 58336615 16077131 15612640 73663129 46906450 56961881 16080191 25010386 67078116 20808801 22536507 46908540 73663557 42779140 42784085 70727502 52081633 52078558 76788688 15675497 28378830 15903435 29377359 57866458 42518598 29374903 15672876 23099790 55820707 81429212 81428051 70726996 57866061 15615909 28209968 50365157 15901381 28377428 24378974 15926185 56964674 23097526 cdd: 10823 xref: COG1101 gene: PhnK desc: ABC-type uncharacterized transport system, ATPase component [General function prediction only] num: 74 22537345 15928093 15615243 46908008 56420563 55820300 22538211 58336397 29375285 28379082 15675020 24379834 52078846 56420197 46908449 24380071 70727303 42783395 15895971 42779221 46908198 28377247 39938506 31544245 24379566 28379048 19746009 81428799 22537040 56963735 58337847 50364868 55821197 78044319 42780274 42518549 52079492 56963003 76788656 56421557 23098259 15900940 55821618 28379409 25011309 15903065 29377565 15675024 15895708 76787331 25012069 25010948 16077516 22538099 52081967 15901826 16080346 15900981 50365051 28211037 56419206 70727246 81428541 29375826 24379844 42518353 16078068 15903021 19746005 56963226 55821265 76787085 81428624 15613729 cdd: 10826 xref: COG1104 gene: NifS desc: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] num: 70 19746071 50812274 15900763 15896225 56963311 23099654 56963350 29376581 52081452 15902827 42783831 42518910 70726298 15615766 24379296 78044327 28378787 55820499 15903045 46907824 76788498 15900962 56964515 24379488 76787090 52081230 15927293 56421137 22537520 15895502 28211135 29375009 15675102 57867237 15927202 56421099 23099470 58337100 81428405 81428456 42783562 28378908 73662356 18310395 73662448 46907741 25011485 15613780 58337461 16080011 15613823 16079840 70726210 15673841 52081268 57867113 42783526 25011216 20808090 19745896 56421331 18310767 15674857 55821445 46908251 20808820 42518878 22537256 28210752 15672519 cdd: 10827 xref: COG1105 gene: FruK desc: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] num: 27 24379887 55820491 15893524 70727194 25011376 57866304 16078503 15896204 15900759 15926376 15672940 15902823 15901056 13507818 73663327 19745928 12044915 46908330 15675729 19746839 15903117 22537494 25011459 24379325 15674887 76788142 15927773 cdd: 10830 xref: COG1108 gene: ZnuB desc: ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism] num: 22 28377363 52081046 56963468 58338024 39938580 28211955 42783406 57867088 56965716 56421005 18310439 73662510 46907674 16080126 15613958 42519746 70726362 15927135 23099852 15896132 23097889 78045197 cdd: 10831 xref: COG1109 gene: {ManB} desc: Phosphomannomutase [Carbohydrate transport and metabolism] num: 88 55820839 25010958 42518787 15893775 25011151 15895604 57865456 42561351 13507805 22537224 73662033 76788161 23097687 15675188 78043544 58337008 15901345 81428968 81428134 28210496 12044903 15613669 29376919 15828955 20807218 46908647 19746157 47459098 24379514 56418898 16077996 23100492 28212123 20808573 46907096 25010608 15675035 70725880 28377622 24379829 28377670 19746020 15927742 18311311 15896233 18310855 76787313 56963264 52079409 19746456 22536672 46908354 26553561 20808416 47459037 55821258 57867667 56421832 29375275 47459359 42779238 76788263 15829180 15675406 46908104 70725302 20809047 15903460 52078669 50364935 58337035 78043024 15612830 22537050 56418689 56419105 15903394 13358094 28210207 15672406 42518819 16077245 56962025 73663046 42784104 15928070 31544786 15901402 cdd: 10834 xref: COG1112 gene: COG1112 desc: Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] num: 18 71894448 15896287 26554300 13507892 28210027 12044992 15925797 42561186 13357950 31544299 73661383 42782286 28377747 47459334 15828593 56419950 13358136 54020258 cdd: 10835 xref: COG1113 gene: AnsP desc: Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] num: 66 42779775 78043222 56420229 16080454 15672338 28379688 42782801 16079763 42519643 76787789 42779840 52078820 16077629 57867186 70725624 58338148 15927274 28377069 52078685 58336601 15928016 42518190 16077698 57865380 42519818 52081965 15672791 73661595 70726230 22537623 19746574 29375679 70725740 25011588 15894751 23100651 15672337 73661900 16080105 42519817 46907017 58338149 58336793 73662379 57865605 15894014 70725164 15673804 55820590 56962956 73663480 81429044 57867777 52079033 24379848 42782522 28378479 15614734 58337203 15927896 15675525 16077380 16077275 56421996 73661753 28378839 cdd: 10837 xref: COG1115 gene: AlsT desc: Na+/alanine symporter [Amino acid transport and metabolism] num: 48 15902413 55821018 18310946 52079251 42784247 42779784 57866863 15613847 42781474 42784236 52080443 25011261 28210864 19746196 56963896 78043036 28210301 15616488 73662711 23098327 16077842 22537303 15675226 42784246 28211600 73663081 16077311 28210878 76787715 52079229 15616595 15926601 24379605 15614335 23097832 42781916 52081689 15615277 16079833 23100145 70726553 15900327 15926936 18310401 52082556 56963031 52078727 56965470 cdd: 10838 xref: COG1116 gene: TauB desc: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] num: 43 28378702 52079351 15615243 20807135 71894520 56965158 15893403 50364839 24379125 42782117 15828896 15925876 56965010 15902003 15613774 39939145 42783982 52081547 56965479 56421391 56962377 29375632 16080113 42779873 13357664 18310467 42779573 42782017 15894680 54020583 28210158 15904043 47458883 56965507 28211072 15893907 50812204 56965510 73661768 56964646 23099772 16080053 31544673 cdd: 10839 xref: COG1117 gene: PstB desc: ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] num: 72 19746170 26554384 29376304 42784171 23097903 13508348 56964353 15903939 15675201 15901250 25011078 56420989 15615553 58336703 15673698 25011988 58336702 46908668 76788490 16078290 28210829 42783395 16079551 29376305 15926966 46908590 47458845 15901903 55821038 76788206 58337710 13357758 52081031 31544245 16079550 24379566 15673699 15894985 70726526 15675202 19746171 57866922 81428118 12045272 25011077 56964352 81428119 73662673 29376194 15903297 78044319 24379565 23100588 52081032 20808055 15903296 55821037 22537148 28377608 22538099 50365051 22537149 46908667 23100781 18309622 28377609 20806837 42518717 76787311 42561022 42518718 15901251 cdd: 10840 xref: COG1118 gene: CysA desc: ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] num: 16 15615692 56964180 29375495 28379430 29375966 42780274 28210158 15613754 52079634 23100588 56964886 23099718 42518457 28211072 56963001 42779333 cdd: 10841 xref: COG1119 gene: ModF desc: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] num: 16 46908008 52080895 24380071 52080137 56420212 16080090 55821618 16078598 15614833 67077947 73662040 30024028 15927734 78043202 56962457 70725882 cdd: 10842 xref: COG1120 gene: FepC desc: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] num: 83 15615854 46908194 76786954 81428014 78044016 15613644 46908416 28377151 15900906 28211049 52081930 56962856 56965182 56419996 15616208 23097717 18310025 23097905 16077816 15926324 56418729 13357625 81428661 26553641 18309795 42783714 12045145 15615857 42783494 16081067 23098162 15895708 42779764 15902982 16080346 28377120 15895259 52081777 15613602 56420799 28210886 19746739 15828968 13507873 46908600 19745542 18310197 28210671 15894078 15675631 42779332 20806886 78043241 13508155 22537539 28379517 28210500 52081808 25011504 13357998 71894360 42518301 52081823 28378191 29376194 20808279 57866215 42782818 16080369 58336835 73663382 15674532 56963603 42784555 70727246 58338113 28210664 15614150 18309207 81429448 18309777 29374837 16080383 cdd: 10843 xref: COG1121 gene: ZnuC desc: ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] num: 62 67078363 15674316 73663395 19745272 55820284 28377362 42783407 16080128 73662509 18310438 46906501 23099851 16077355 15901981 42519284 28211954 76787726 52081047 76786930 58338025 52081846 39938579 70725144 25011629 15927136 15903535 15674574 15673300 15901484 15896131 25010226 29375187 15926310 46908081 24378696 56963467 81427790 15904018 19745581 29374714 15674096 22537675 15613957 57867089 20806877 28378447 22536340 29377243 56962888 15613952 70726361 46907675 28377886 29376583 56421006 23097887 42519747 56965718 57866184 46906390 24380337 81427898 cdd: 10844 xref: COG1122 gene: CbiO desc: ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] num: 148 15904067 76786872 56420563 29374882 15902474 26554425 81429349 13508171 42561244 71894669 23097603 56420341 28377151 12045033 15616202 20806767 15672260 56418670 28212152 22538285 52078890 15902998 73663023 58336657 46908773 42518458 24380478 15900398 28377868 15900617 15902025 52078837 52078746 55821976 42561243 25012145 13507933 22537001 39938506 15902676 78042689 56420415 28211943 70725832 15612728 15901290 56961961 13508172 19747027 18310452 15675626 56963699 57867750 29377243 24379446 56962943 70725833 42519577 52078639 56964949 42783706 18311356 57867749 56420444 15928270 42518457 52078640 54020346 13358102 15927802 47459268 70725776 15828858 15616055 78044171 25012144 15896353 15904066 46907426 29374881 18311355 73662000 31544782 71894209 26554424 81429350 42779220 76787733 15672259 55821975 23097602 28212151 15902024 13507932 12045032 12045159 15675928 20808629 15896352 78045037 16077214 42779221 56419155 20808630 24380477 50364967 39938665 73661669 22538284 58336658 50364968 15612727 56961962 19747004 71894670 15894647 76787327 19746734 56965419 25010910 15894060 28377867 12045160 54020345 55820385 55820404 58336441 16077213 56418671 56420896 56965402 13358103 15927801 78044595 73662001 18309177 81428167 19747026 81428394 78044287 70726882 46908772 15828857 81429448 47459267 15675927 31544783 28377053 cdd: 10845 xref: COG1123 gene: COG1123 desc: ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] num: 42 15903234 15675768 28210298 42781727 42780511 29376662 15926662 52079464 28378430 76786769 15927734 56419258 15903336 57866568 52080137 56419155 52082484 42519581 56962457 42518159 42782376 24380283 16078387 56420545 23098259 56962013 25011720 81428666 52080894 15672307 28210473 58337224 29375193 15925909 18310565 22537773 20808018 25011782 28379235 81429448 28377092 42781637 cdd: 10846 xref: COG1124 gene: DppF desc: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] num: 26 73661580 70725151 25010263 19746906 58336397 16077628 31544721 28211538 22536375 29377243 15675791 42561484 13358123 15828884 19746669 76787339 28210664 71894208 57865735 76787495 15928042 22537657 15613277 25011614 15614641 54020375 cdd: 10847 xref: COG1125 gene: OpuBA desc: ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] num: 57 25010309 13507794 28210130 25010222 56965821 76787350 15675110 28378307 19746080 22536336 18309539 73661760 22536428 76786922 15928027 52081952 24380448 15896104 15672829 46907656 57865411 15901689 12044892 56418849 25012123 24378766 57865717 23099145 55821313 70727171 28377283 15903720 24379532 57866520 16080436 46907649 16080426 29375453 56964793 22538263 56419349 81428231 28377608 81429480 42780377 57866320 73663306 56963757 29375272 42781377 58336543 73663101 15894754 70725607 42519466 15926399 76787179 cdd: 10848 xref: COG1126 gene: GlnQ desc: ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] num: 136 16079986 42519233 18310308 25010607 22537610 70725642 15896852 22536671 55820918 24378949 15903357 73661930 15901310 15675527 19745408 22536476 76787442 58336482 57865358 39938565 24379048 15675230 15896570 24379608 28379593 28378732 15673778 15903164 15902666 15612735 55821170 19746577 15893408 18311074 15902452 15927990 15902772 42783269 52080937 15672921 16079452 25010746 52078866 25010990 16080999 28377713 76787791 42518172 15902579 28378895 23098461 24379908 76787018 56420511 76787403 19746200 46908516 15900712 15673742 29375477 42518712 42779785 56961810 42780023 15902580 28210298 56962687 12044932 23099527 25010356 76787227 19746458 55821556 16079796 20807015 15675408 42779690 73661553 15900518 22536882 42518675 58336905 73662247 81429105 25010206 76787882 24378750 15901103 58336458 15903397 15893669 58337337 56421990 16077427 81428469 29375394 42779549 24379262 18309584 70726106 55820685 55821478 42518508 24379380 15614026 15894166 56962544 42782596 46907969 15927431 19746297 15901348 55821628 22536320 81428666 78044744 58337931 15900369 15674454 44004548 29374888 22537109 46908484 71894126 28377654 23098012 57867283 39938974 15900607 15828570 15675264 55820256 29375353 25011576 46907079 29375696 cdd: 10850 xref: COG1129 gene: MglA desc: ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] num: 61 15612810 56418847 15896852 18309287 56421763 28210616 28210577 52078890 54020365 58336657 56419482 15828815 78044008 54020376 16080579 15616292 15673619 76787500 52082551 24379336 13357625 15893788 52078911 18310612 20807247 56965308 46908081 56420415 58337749 15614885 28211943 20806870 20806730 15612735 15894166 15616003 18310324 15615857 23100029 15927990 42779813 42519857 56962190 47458849 54020224 16080999 70725178 56420429 39938582 73662703 25010190 22536301 42782071 23098012 28210006 56420444 52082133 20806812 16080647 29375477 56963022 cdd: 10851 xref: COG1131 gene: CcmA desc: ABC-type multidrug transport system, ATPase component [Defense mechanisms] num: 375 46908474 15902903 52082406 15893463 23098175 47459031 31544580 23099592 15613617 28211526 23098477 15900617 42780547 46907324 52078746 54020527 52081368 42783344 81428156 76788694 56965290 15900606 18309866 42519226 78043083 50364998 13357650 42782500 24378748 18311013 15894148 56962943 52081967 15896646 76786966 76787616 42782410 15900834 81428541 15828667 78043982 15902654 52078765 56963226 19746209 28379235 19745834 56962196 55821685 57867347 52082392 46907219 18309931 20808325 23097701 15893433 15613381 24379479 55821422 23098341 56419677 28378559 15896757 28377247 56963223 20807330 15615211 56965318 15896514 28209932 52082577 15675073 28378601 15672515 70725136 42784455 56962982 42781057 56965675 23097969 42518331 16077264 42780227 55821331 25010433 15613215 25012031 70725082 56420896 16078068 23098526 28210355 15613011 15612742 56420899 15902503 23097702 16081114 71894154 15675537 22538116 15893533 73661442 28379137 23098344 73662169 28373160 15927505 56962820 15673978 19746631 28378082 15896842 78043302 76788364 25011594 76788121 15674185 46908198 28377101 42780549 15900932 16080462 52082289 46907954 56419193 15004794 26553549 20808566 25010326 16077516 42519546 22538170 24379473 26553762 28211612 42518353 56964949 25010370 15613008 56418826 15902663 22536492 42782701 24380175 15896278 15928093 31544489 42561230 46908461 56419272 56963886 81429027 46906987 56963298 70726590 29375898 57866787 15926900 15894153 24378906 23097932 26554184 52080905 24379127 42781056 24378867 28373165 15900436 78044743 56963735 15903324 52080485 52078801 56420178 57867303 42782660 15894120 42519725 15903859 50365071 15893560 52079381 31544307 46908958 13508073 15616456 57867345 76788566 78043273 28378591 23100525 15613728 18309287 15615776 56962043 15893558 15926052 28211446 20807601 15612945 81428244 58337470 42783193 28379261 15613754 50365267 57865759 24379937 70727612 15612913 15925979 15895310 23100630 15902676 20806945 42781322 52079492 15901538 18309426 15901549 46907158 78044210 15901235 25011980 42519577 15901826 28211037 28211610 78044958 42784574 15903589 73662271 16080917 15675624 76788565 31544722 42783940 42783706 56965170 56419445 55820625 16080097 28378597 15901279 26554424 70726025 55821585 42781650 15616455 15895991 23099169 56965827 24379579 10957143 58337847 16077326 15675239 28211169 57866885 15925907 56963199 28378342 15614661 22537630 52078984 81428167 46906995 15674795 28378464 28211339 73662758 15927507 16080053 20808885 23097933 18450323 81428549 56418847 42784530 52078860 25010705 29375285 15613566 24378922 26553757 15927411 56964897 42780935 46908449 70725310 15903281 28210520 56962395 52079359 42784454 20806907 56963245 58336585 42782000 46907212 19746588 23097726 46906917 22536464 15893528 29375900 42781604 23098610 24379622 56420156 15612853 26553809 22536444 73662645 15893580 28378174 42560938 15672236 20808275 16080791 15928105 73661446 15616055 20807632 16077898 50365461 15672947 23097883 22536834 42560870 15616541 16077972 24379505 73661524 70727303 29377657 15893442 16077973 29377560 46908826 42782750 15675579 76787670 81429414 23098570 46907866 15903602 71894667 28210375 19746732 52081529 25010981 29376229 20807273 73662166 22536556 42519092 52082403 25010344 15896185 70726126 20808765 56419257 28378083 22538092 52078673 50365279 70726023 56965402 20808535 28210363 28210006 24379197 24379731 cdd: 10852 xref: COG1132 gene: MdlB desc: ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] num: 338 46908937 28379465 29376153 15901892 18309362 28379354 18310507 16077888 15613720 46906852 42518463 55820823 55820618 71894518 52080033 58337630 16078497 42780019 42781537 15901742 50365351 15901743 24379368 46907068 23098688 23098553 28378961 42519377 55820418 42519221 15903333 26553673 28379046 42518464 28211086 52080032 42519135 29376733 20807318 15896012 22537484 42780018 22537485 15613504 55820619 15903698 15672293 58337553 15926320 56965323 24379515 15901196 50364933 81428757 29376154 15901893 15614898 58338069 42519168 18309508 54020298 52082316 20808717 18310508 15672245 58336922 58338122 29376283 76788037 16078036 50365350 81428698 29377079 19746096 15927440 28210179 50365241 23100898 25011781 19746737 28379405 20807620 24379593 20807600 18309454 39938545 15903699 29377383 58336919 76787154 26554210 25011154 20809061 42518560 15903259 56965728 13507758 15613276 42560969 20809072 28379466 28210178 56963925 46907880 15901287 28379353 15675125 58337631 70726096 20807317 15894891 15829212 58338070 56962778 15828510 24379356 15674417 13357615 29377080 23097712 16078037 52080539 71894519 23098554 23097881 55820822 15896655 55821489 81427845 52079324 76787704 50365240 18309361 15901211 15613689 15903926 29377384 28210626 42519763 15903258 19746095 42519134 26553862 23097711 24379007 46906853 28211087 58337421 22537229 46907348 50364984 15893949 31544210 47459187 42519083 76786773 16078496 42560970 26554209 15895659 20809078 56420166 55821667 15613378 58337420 25011153 42519456 42519172 23098355 46906347 55821917 15928007 24379367 56963926 71894524 58336423 25011449 29375379 42784331 76787124 16080535 58337915 15829213 15674418 15903246 25011442 46907879 31544209 47459346 73661695 42519174 12044864 42782765 28211454 52078678 76788413 15928006 15903776 55821920 52082386 18309209 15901212 15895658 25010577 56963088 46906348 76788195 20808868 52080538 15900076 55820520 18309815 24379006 22536639 81427887 15672243 29376282 56962084 26553674 22537228 15673504 58336424 26553861 55820521 29375676 46908931 28379948 28210625 24379516 81428883 15675126 42518673 55821668 29375526 57867306 15673254 15901668 56419871 15896656 42781108 25010578 15901669 29375195 16080776 42779663 29376734 42519764 52079459 52079460 15672292 12044865 23098860 73663385 81427885 54020279 15672693 73662236 42519804 15903332 15613376 42782764 15613721 15613688 58336902 71894525 58338175 58336901 56420165 23098687 22536640 15675629 73661694 70727252 25011443 26553700 56418838 23098861 18309509 42781536 56963025 15896527 42518672 46908938 25011450 19745368 42519376 58336887 20808867 56963267 29377161 42519844 56419870 28210889 20808718 15896526 13357616 42518111 26553699 15616453 16077935 15894836 47459345 81428758 29375380 56963026 31544569 52082315 57866212 18309816 25011780 29375196 81428882 29375525 15902181 13507757 58337552 15673255 28378960 24379594 58338105 16077889 28379949 42519605 56963266 81428699 15828512 15614899 15901286 20809098 31544570 42782684 76788196 18311278 15903928 19745369 24379355 15896011 56962777 cdd: 10854 xref: COG1134 gene: TagH desc: ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] num: 64 16080097 15926577 26554384 15902144 58338035 19746832 42782274 28377151 29376690 57867312 15675806 73662231 24379283 46908948 15674460 81427666 19745872 76786930 19746918 15675722 24379608 15616221 25011629 15926314 18309255 15902792 23100378 28377262 81428156 16077662 56965308 20806945 15672897 15893472 15672185 16077450 22537675 56962343 70725163 15927445 78044273 18309252 19745414 15900054 78043038 56965127 16080623 15926581 29376978 70726090 57866196 23097887 58338157 55821452 42519277 15895595 15674833 70727258 56420468 46907303 70726969 73663391 52082104 15900733 cdd: 10855 xref: COG1135 gene: AbcC desc: ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] num: 57 55820396 42784171 56421534 25011726 15674484 56962650 56420989 42779422 16080327 58337208 39938618 15896874 57866079 46906525 29376305 22537779 46908590 19745438 15894271 56962395 52079384 16079550 15926139 78044077 70727048 56962328 81428725 52081762 56420469 76787741 28211035 76786948 15616043 42779277 29376990 29376591 23099555 22536938 23100618 15672304 28378424 25010849 15926497 29377648 56964749 15896869 42781081 42519277 57866402 23099839 23100781 15928033 73663175 15900089 28378929 15902193 24380288 cdd: 10856 xref: COG1136 gene: SalX desc: ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] num: 252 15895268 15928209 56964456 15829096 54020469 15893518 26553802 42782274 15894796 46906635 15675806 52080036 29377227 76788445 20807654 18309832 15613162 15893537 42781575 16081015 54020143 29376399 26553816 78043352 15893744 52082492 42781680 56962041 54020451 18309104 15616235 15896850 15673732 13507820 22536849 28210631 15612849 28379231 15895989 15672853 28378125 70725163 22537507 46906989 28211716 15616475 57865583 23097814 15674872 24379446 50812293 28210149 15081487 56962034 16078500 56964993 15903245 20806778 15925902 15902569 26554475 15901810 58338181 24379760 42783574 52081527 50364834 42781482 81429032 15894109 76788461 29376561 57865968 31544374 28211549 15903815 15901195 15902144 42782321 18310523 15615262 15614319 15895524 15893611 78043136 15902738 13508422 28373180 73661398 28379430 29376227 19746918 15675722 29375888 58338086 70725407 24379597 15893816 15896795 73661608 25010660 28379048 57865387 15901488 81429453 54020450 31544459 76786856 23098288 46908964 15900054 55821337 78043038 46908751 20809052 25011472 15894813 15828537 15828535 58336441 15903540 15893458 15615684 28373145 58337938 52082430 52078903 71894065 29375383 42784039 13508424 12044917 20809056 15927939 19746832 16080090 15675216 56962717 22537164 42784031 15616067 15893664 70727663 23100592 15674819 29377449 15901780 54020179 15612836 81429062 56965751 42784418 15674000 52082551 57865974 22536307 76787750 26554009 15928286 25011093 56965257 25010714 15672696 46906426 15900793 42782139 22536788 15612844 42519784 24379816 76786743 42781814 15673085 46908350 31544226 12045326 42560590 42519857 78042744 22537134 15613316 54020144 15900588 39938582 39939085 46907977 54020312 24380277 28377222 73661852 15902646 46908543 57866223 15926338 19745913 15893363 15829097 28210233 56962481 15903843 67077947 81428977 19745858 54020315 54020518 15900679 15671992 29375908 15900508 56420877 13508155 18309728 15672641 15829244 19746185 54020314 24379317 70727232 24379775 28211464 70725700 23097617 28373154 25011014 15902856 76787319 28211096 28379299 16077441 57866927 42779965 81427737 15926622 71894622 46907442 15926010 25010195 12045328 13357675 15674238 58338157 42519721 42783934 16080094 46907733 54020311 16080523 54020310 52082583 15896819 81428624 24379530 cdd: 10859 xref: COG1139 gene: COG1139 desc: Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion] num: 11 42780491 16080457 29375685 15673716 52081970 78044095 78042713 23097826 56418929 15614396 56962750 cdd: 10860 xref: COG1140 gene: NarY desc: Nitrate reductase beta subunit [Energy production and conversion] num: 7 28378214 52080446 15927974 56962490 16080780 57865453 70725656 cdd: 10861 xref: COG1141 gene: Fer desc: Ferredoxin [Energy production and conversion] num: 31 20808193 15612772 42780681 46908177 78045103 81428633 25011499 15896855 15901445 73662572 52080814 76788110 15674843 56420780 24379165 57866947 55821148 15614168 28210609 70726429 19745882 29376106 15927065 56963609 42782814 18311493 15903501 15673687 22537534 16079361 15614920 cdd: 10862 xref: COG1142 gene: HycB desc: Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion] num: 6 78044791 28212003 78045112 78044076 18311557 20808132 cdd: 10863 xref: COG1143 gene: NuoI desc: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] num: 15 52080591 78043124 42784465 15895764 78043690 20807671 78043320 56964420 15893326 20808125 56964940 20806657 56421885 78043726 15896602 cdd: 10864 xref: COG1144 gene: COG1144 desc: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion] num: 18 28210729 15893595 18309258 56965540 56419957 28211598 18311429 28210533 20807368 18310047 20806954 15896764 28212106 28210852 78043263 20808295 18311043 28211392 cdd: 10865 xref: COG1145 gene: NapF desc: Ferredoxin [Energy production and conversion] num: 24 20807301 15895497 15672404 29377046 78043073 18311076 46907060 18311328 15896186 78043320 29377068 29376666 15896720 78042764 78042752 78042700 28209841 15895805 28209953 78043414 15895915 78043536 78044500 78044813 cdd: 10866 xref: COG1146 gene: COG1146 desc: Ferredoxin [Energy production and conversion] num: 19 20807184 78044337 46907060 15893401 20807375 20806863 20807786 20808034 78045208 23100035 78044911 28211125 78044690 20807374 20808579 20807413 78044600 78045012 23099185 cdd: 10873 xref: COG1154 gene: Dxs desc: Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] num: 20 31544557 56420927 26553525 18310801 20807747 52080960 15004809 15895347 16079483 28211241 15673655 42518499 42783295 15615342 46907591 58336694 15673463 56964227 78045077 28379134 cdd: 10874 xref: COG1155 gene: NtpA desc: Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] num: 7 18310620 29376065 28210705 28211923 15901171 15674362 19745323 cdd: 10875 xref: COG1156 gene: NtpB desc: Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] num: 7 15901170 15674363 29376066 18310619 19745324 28210706 28211922 cdd: 10876 xref: COG1157 gene: FliI desc: Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] num: 12 56419757 16078687 15615018 42780842 46906967 78043388 28211328 15895428 52080226 23099013 56964031 20807886 cdd: 10877 xref: COG1158 gene: Rho desc: Transcription termination factor [Transcription] num: 19 42784505 18311189 15896143 20806667 28210058 46908722 29375746 16080761 52082242 23100456 78044086 15616343 56421917 28377399 56965637 70725915 57867596 73662072 15927695 cdd: 10878 xref: COG1159 gene: Era desc: GTPase [General function prediction only] num: 59 76787745 18310997 15902915 52080713 28211641 13508307 19745599 15927147 24379997 28378610 26553792 39939111 15673134 42783426 73662498 70726350 50365082 15672333 52081076 20808307 42519246 42780775 25011601 70726470 15894577 56963446 71894402 56421023 31544597 46907690 58336961 42560997 15614263 15613930 22537642 47459181 23099155 16079583 81428488 16079261 23099406 42782848 78045135 15674592 23100099 58337483 20807454 57867009 57867148 29376905 57866935 52079196 55820698 54020101 15900846 15828851 56420088 13358054 12045249 cdd: 10879 xref: COG1160 gene: COG1160 desc: Predicted GTPases [General function prediction only] num: 50 78044680 15903596 76788647 22537760 56420018 24380270 20807296 15901543 13357944 56420756 52080793 13508214 15927056 20808046 23099252 81428627 15674498 50365015 58337266 15672737 19745453 78045106 42780705 39938726 56963641 55820417 46908170 15894928 18309090 42519017 28211008 15894988 28378534 70726437 47459318 15828559 73662580 57867002 54020024 15614201 16079341 28210831 42560947 25011707 71894165 31544362 12045187 18310737 26553682 29376112 cdd: 10880 xref: COG1161 gene: COG1161 desc: Predicted GTPases [General function prediction only] num: 76 46907499 26553505 15613886 39938764 13358157 19746107 73662832 47458954 55820933 42782930 22537173 50365355 20807903 18310689 52080207 42519513 52081117 29377339 28210940 31544622 42560964 15828777 56421060 56963402 56964050 15901581 22537804 15901020 13358031 55821597 15926826 15615039 73662470 50365167 15673276 16078668 15927177 56419739 31544826 23098994 25011748 26554096 13508395 71894674 24380165 46907719 23099443 16079621 29376208 15903636 58337275 70726319 28378511 58337796 12045301 42561081 15903087 24379433 42783462 78043127 15672203 28378240 54020438 81429003 76787382 15895038 76786933 70726671 57867067 42519031 19745428 15674473 57866703 25011102 15675137 81428605 cdd: 10881 xref: COG1162 gene: COG1162 desc: Predicted GTPases [General function prediction only] num: 51 71894144 13357776 26553505 39938668 42782953 52079579 26554358 42519513 46907558 16078641 42519408 42560854 73662860 23097799 15901807 42781153 12044962 15829155 28210914 15903840 78042965 50365038 15674443 15895006 58337591 57866767 54020105 46908051 13507988 19745395 23098965 20807942 15673908 28378376 24378848 52080181 29377575 47459395 25011859 56419712 31544841 22537916 81428308 18310719 28378320 56964079 15926804 55821770 15615066 76787174 70726695 cdd: 10883 xref: COG1164 gene: COG1164 desc: Oligoendopeptidase F [Amino acid transport and metabolism] num: 78 20809048 22536922 52081782 39938664 81427900 56965212 56420353 15673709 42780388 57866920 56965659 23098825 46907721 22536969 18311305 23098671 25010879 15613434 29375260 42781958 15612934 20807490 70726528 28378823 73662675 47459034 46908422 23100050 18310435 12045036 15926589 42519744 56419498 73663094 15926964 26553736 13358085 42560786 42782553 42784641 15900856 15902926 24379118 76786918 23098626 81429492 42780526 76787070 56963056 13357621 25010834 20808843 58338020 71894365 28379142 15675317 15901609 42781910 28211583 16080348 56419357 19746359 54020563 19745715 57866543 15903648 55820537 15828792 15615419 13507936 52079656 15674688 29377156 42781654 70726958 56963785 52078779 16078219 cdd: 10884 xref: COG1165 gene: MenD desc: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] num: 12 23099780 16080134 46907906 52081568 57866509 29375079 56421410 42784061 15672713 70726920 15926630 73663057 cdd: 10886 xref: COG1167 gene: ARO8 desc: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] num: 67 16077585 42781826 81428962 15613141 15896884 42782149 56962230 22536284 16078013 18310938 57866088 56965694 16077457 56963268 52078919 55821293 15928139 24379113 15903293 42779724 15675174 15613690 56962515 15901247 28379187 42781686 15926195 52079428 28211823 18309348 76787885 42781766 73662930 28210408 56419273 24379396 19746142 15925812 15614503 28379590 16077604 25010173 46908335 15895564 15615258 73661495 20807321 42781236 52079590 73663547 73663350 56962973 15614758 29374768 15612995 52078854 16077425 29376920 16077591 42781657 70727490 28378137 50812213 23100143 52082434 67077973 42782839 cdd: 10887 xref: COG1168 gene: MalY desc: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism] num: 29 28210542 15673898 56421466 29377360 15901370 15896223 42784091 55820446 42561329 52081639 29374687 15903419 58337057 15615875 16080196 22537727 46908541 42518840 28379188 28379350 28379241 70725222 28379831 24380052 23099793 42561317 76787613 56964652 25011676 cdd: 10888 xref: COG1169 gene: MenF desc: Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism] num: 16 23099781 57866508 29375078 42784062 16080252 15926629 42781462 70726921 52081569 73663058 56421411 52082188 46907907 16080135 23098410 15672714 cdd: 10889 xref: COG1171 gene: IlvA desc: Threonine dehydratase [Amino acid transport and metabolism] num: 29 42781007 42781564 18310147 15614274 73662126 70725973 55820248 57867574 15927019 78043335 15673209 81428187 24378744 15902450 29377066 28209845 56963814 28212193 56962953 16079236 46908218 15900367 15927636 56420126 78043400 23100071 56420308 52080686 42560673 cdd: 10890 xref: COG1172 gene: AraH desc: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] num: 30 55820861 42782069 16080648 56965307 42782070 28210617 22536300 25010189 15673618 76786891 73662702 28211942 56419481 52082134 15616293 20807248 56420428 22538212 70725179 18310611 76788382 56421762 24379551 42779814 25012070 58337748 15614884 20806731 54020364 23100028 cdd: 10891 xref: COG1173 gene: DppC desc: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] num: 125 56419348 15901716 15926961 42561482 54020377 19745423 15896864 29375494 76786995 31544723 20806749 15616204 78044777 56965421 29377563 13507955 52079637 20806589 42560733 58336542 24378765 15613132 42779969 20808318 46908428 56964177 23100067 71894362 52079792 15896871 20808878 39938675 15612593 15612912 13358125 42781361 15896876 76788518 58337578 56962552 42779331 73663102 42780376 73661578 42780078 15896429 52080893 22537659 52079329 15926576 26554330 15675789 55821426 56964855 57865744 42779803 56963373 25011616 46906377 52079643 31544719 15673820 46906509 25010221 22536373 55820271 28211056 57866909 23100424 56963014 47459285 28378029 23100522 50364910 39939146 20807108 15614361 15903235 18311253 70725291 15926584 16078205 15828882 15903747 57866519 42519396 23099904 67077916 15674467 39938509 52081165 15614639 42779287 20806869 15895641 78044187 56419004 28211536 56418713 70726970 16078359 54020550 15928044 76787672 71894207 28211080 26554006 12044930 42781487 25010261 70725150 15828755 22536335 19746904 56965822 16078210 15616199 56962014 15672328 15893471 56962342 15925911 56961814 81428319 23099715 cdd: 10892 xref: COG1174 gene: OpuBB desc: ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism] num: 63 15672830 57865410 24380449 19746081 28378308 29375273 25010308 56964794 28377282 56418848 46907650 76787433 23099146 57865400 73661763 73661761 15896103 25012124 57865716 29375452 70727170 29375450 22538264 55821315 81428234 18309540 55821312 28210129 70725610 15894752 24379531 81428232 52081949 81429479 22536425 24380451 52081951 15928024 16080435 15926400 22536427 76787841 57865706 15903719 42519465 57866321 16080425 73663305 16080433 56963756 46907653 56964796 15928026 15901688 42781378 25010306 16080423 15675111 46907655 28378310 76787109 70725608 15894755 cdd: 10893 xref: COG1175 gene: UgpA desc: ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] num: 146 52082462 23098230 23100014 56965259 20808341 15901924 52081377 15613465 46908360 24379333 15903576 16080513 42780969 56962175 15893953 56965787 52079549 58337902 56962133 56421808 29377370 52079096 56421741 15828572 24379417 56962097 58336832 42783110 28378073 71894346 15901723 18311324 54020172 23100878 29376740 15903753 15614583 15926968 19746286 15613808 15829110 76786863 56965062 12045041 28377116 15613681 25010109 15613640 52081376 56964978 20808777 46906411 15616251 15673666 20807286 15901524 56419240 18309559 15615288 56965281 15903661 47459224 46907091 23100928 56962436 76786956 15674434 24379953 81429106 31544239 56965346 56420657 52082461 56965232 15893718 15903569 56962986 42561052 22537588 46907961 15903960 15616408 56962176 15616243 52079767 31544451 76786830 56962215 52079783 39939237 42518303 23100008 16080468 56962179 16080080 55821512 42519670 16080312 15828498 52082561 56962119 16079926 56964888 56965037 24379910 52081842 15614488 20807282 55821050 47458884 15675253 58337712 56965045 29375911 15896903 23100024 56962460 46906489 25011553 18309354 58338111 56962437 20808712 19745385 56965535 23100577 20808246 15828969 15614788 22536220 24379954 54020176 15615488 46909027 50364840 56965203 15925919 15675248 71894399 15901517 71894128 42779709 15614428 13507874 16077765 56962166 cdd: 10894 xref: COG1176 gene: PotB desc: ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism] num: 52 42560775 42780473 39939146 70726853 58337030 15894126 55821513 56419259 46907650 76787138 28378428 13507795 42518814 73662997 25011228 15926685 50365327 73662998 22537268 15828895 47458884 29375791 15926400 54020582 26554312 15675086 15615487 56420544 13357665 56964970 15902265 28377239 57866321 52078847 15828969 81428973 15901242 15903288 18310951 24379416 56965786 19746054 23100610 57866620 31544672 42781378 71894521 46907038 29377135 15673146 12044893 56962502 cdd: 10895 xref: COG1177 gene: PotC desc: ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism] num: 51 18310952 42560776 58337031 26554313 12044894 25011227 18310255 23100611 56964971 18310253 42780474 22536670 15926686 39939147 56419260 13507796 24379417 31544671 73662997 47458885 70726852 57866621 55821512 71894522 76787397 29375792 15828894 15894752 42518815 13357666 50365326 54020581 76787318 29377134 28377239 15614788 15675087 46907039 15901241 15903287 28377238 15894125 19746055 52078848 16080512 22537267 56420543 81428972 25010606 31544240 15673147 cdd: 10896 xref: COG1178 gene: ThiP desc: ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism] num: 18 23100177 28211355 15901653 12044894 18309421 15902264 56965024 28378428 42518303 73662671 42780512 42783110 15903685 28210038 42780884 56965410 15613077 20807282 cdd: 10897 xref: COG1179 gene: COG1179 desc: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] num: 14 15613818 56421106 56963346 57867124 28210584 18309039 52081233 15894195 42783530 73662440 78043179 15927208 70726293 50812275 cdd: 10898 xref: COG1180 gene: PflA desc: Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] num: 42 18311485 42779644 28379672 56419300 15894700 18309642 16077863 24380068 22537545 28210648 28210931 20808263 76787669 15674526 15901799 78044893 57865732 15675825 55821616 25010387 52080502 29376171 15925930 19745536 18310136 15900180 15894268 28379123 25011510 76787302 24378975 78044002 15673795 15902270 46907635 78045054 81428584 19746938 22536508 20808359 28211125 15903833 cdd: 10899 xref: COG1181 gene: DdlA desc: D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] num: 18 25011901 28210045 23100371 15616215 15616217 15614184 15616216 23100370 22537960 20809114 24378774 76788315 15894818 18311195 23100374 28378916 23100373 46907307 cdd: 10900 xref: COG1182 gene: AcpD desc: Acyl carrier protein phosphodiesterase [Lipid metabolism] num: 43 71894112 13277519 16078983 15896662 56421963 29377086 42781333 42560589 15672363 22536453 70725130 15893893 70725387 52080616 16080407 26553642 58337424 15672096 76788687 25010333 13508218 46906856 42780146 28377777 42781062 18309538 50364861 52081874 47459186 15614530 15616605 56965592 50364867 42784584 54020204 46907016 18309773 15828783 15925915 31544728 54020205 15616422 28377037 cdd: 10901 xref: COG1183 gene: PssA desc: Phosphatidylserine synthase [Lipid metabolism] num: 13 78043329 42780610 39939099 52081649 16077296 18310311 15893964 15613873 15894085 56421064 28210104 42780122 28211036 cdd: 10903 xref: COG1185 gene: Pnp desc: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] num: 29 16078732 24378670 76788173 15614970 42782895 78044607 20807834 70726640 15675748 25010273 19746859 55820183 57866764 22536387 46907557 73662800 15926857 29377522 39938737 28210966 15902560 52080276 18310662 56419804 23099059 56963987 15673837 15895084 15900497 cdd: 10904 xref: COG1186 gene: PrfB desc: Protein chain release factor B [Translation, ribosomal structure and biogenesis] num: 31 24379740 28377601 15902709 73663271 19745741 16080582 15926431 39938959 55821157 57866389 58336996 23099950 18311152 70727136 15896625 15672953 42518772 15616167 56421641 28210088 15896100 56964831 15674713 20807024 81428109 25010633 46908681 76787098 52082063 78044242 42784339 cdd: 10905 xref: COG1187 gene: RsuA desc: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] num: 82 24380085 42783720 42781479 15902300 71894334 25011583 22537733 18311295 58337102 15895934 16079373 54020392 25011682 42560927 28211002 15900581 56421368 42518880 15903731 57867194 28378541 39938724 23099754 46908512 15674518 55821481 15614139 78045168 81429040 28378068 57866960 52080830 18310062 19745526 55820359 23099278 15927330 15900214 18311246 81428635 24379111 52081501 19746315 73662568 70726424 50365365 20807779 28211988 56420818 22537618 15902641 20806585 16080055 76787384 28209926 15828808 15675276 73662319 71894432 15927074 55820632 76787925 42780671 19746361 15674222 56964562 78044539 56963596 15673334 15615835 58337261 42783894 25010876 15895126 70726170 46908183 22536965 15675319 76787803 42519012 15901702 30024033 cdd: 10906 xref: COG1188 gene: COG1188 desc: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] num: 30 15671997 58336613 15674257 42518365 55820110 15902051 15899956 70727504 76786971 23097522 28377426 73663559 16077127 15612636 42779136 56961872 29374900 25010084 56418587 57866059 46906448 19745207 81429214 22536195 15926183 15896457 24378539 20808809 52078554 18311460 cdd: 10907 xref: COG1189 gene: COG1189 desc: Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] num: 35 28211240 15901067 56964226 25010614 15675401 15828642 15615341 81428295 42783294 22536678 52080959 24379061 28378304 13357999 26553603 42519418 15672840 19746451 55821222 23099331 47458915 16079482 42560658 15895346 29375564 18310800 15903129 76788457 20807748 78043160 50365145 54020395 58337601 46907592 56420926 cdd: 10908 xref: COG1190 gene: LysU desc: Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] num: 56 47459109 76787024 81428525 24379232 29374909 15674679 16077150 42779156 13357618 22536704 76787521 73663548 52078577 42518374 78044571 57866087 15612661 15902670 42560629 26554296 46906461 56418609 71894621 25010826 20808736 55821936 55820759 12044988 28378421 13508016 56420706 15672355 70727492 54020381 15900610 25010641 19745706 50364845 15674719 15828873 15828861 15926194 58336620 19745748 47458879 28209978 81429206 22536914 39939075 31544279 15896444 23097543 15673099 56961899 18311447 28377434 cdd: 10909 xref: COG1191 gene: FliA desc: DNA-directed RNA polymerase specialized sigma subunit [Transcription] num: 83 18310743 16079692 20807766 15895046 52080136 78043723 18310750 16080376 20806647 56963382 15615117 20807708 42782997 28210821 15895412 52080862 16078596 23098931 15894509 23099454 56962590 20808063 52081127 73662123 56421959 56964615 28211312 56420843 56964009 15894972 15614994 78043803 23098930 56419662 16079402 16078710 15615119 52079892 15614101 42780162 78043932 23098557 78044674 28210822 16078597 42783188 46907127 15613848 47459124 16078409 52080250 56419663 56421070 18311030 15613092 42779469 54020640 56963560 18310744 56964115 42782996 15895573 78045111 15927639 52079008 23098085 57867587 42783467 16079629 15894973 42782494 20808064 20807860 52080135 56964116 16077540 70725968 23099037 23099294 78044685 56419781 28211847 56419467 cdd: 10910 xref: COG1192 gene: Soj desc: ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] num: 42 29377956 67078327 56422025 21392932 28209873 56899917 12045330 44004392 81427632 10956305 29377740 26554255 15896961 78043660 42784676 56965870 10956429 10957157 58616128 29376884 31544205 15081480 42519769 26553460 15616620 16081149 15893335 58338075 21392770 46908978 18311634 31544849 23100942 18450351 28379584 81330255 20809120 13508427 29377875 15004880 28211566 52082642 cdd: 10911 xref: COG1193 gene: COG1193 desc: Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] num: 40 58336758 52081359 20808111 15926728 24380226 15900325 56964440 28211873 23097694 70726818 28378865 46907451 81428007 42519898 78044071 57866654 15615668 56965776 15895607 18310863 15612939 15004802 55821734 73662960 15902412 25011803 16079910 42782550 29375971 15673627 19746770 56421228 20807212 42518575 76787272 23099579 22537858 15675664 42783724 29377437 cdd: 10912 xref: COG1194 gene: MutY desc: A/G-specific DNA glycosylase [DNA replication, recombination, and repair] num: 26 52079318 81429085 22537854 25011799 76787082 15675660 55821729 16077929 42779657 15672823 56418998 70726094 57867309 23098351 46907920 15894778 15903151 28379696 73662234 56963081 15901090 19746766 29377184 15927442 15613494 24380223 cdd: 10913 xref: COG1195 gene: RecF desc: Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] num: 32 15675937 25012150 81427620 15893302 19747036 42779085 55821982 16077072 42518088 58336358 15904073 78043999 28209864 15612567 56418539 70725005 24380484 52078495 46906229 29374665 73661313 15925709 23097459 56961786 20806546 18308986 76787191 28376978 22538290 15673957 15902031 57865928 cdd: 10914 xref: COG1196 gene: Smc desc: Chromosome segregation ATPases [Cell division and chromosome partitioning] num: 48 31544525 25010801 20807912 31544374 57866685 15903169 13508049 52080197 70726681 56964062 15615050 15926817 18310698 29377553 42561011 24379903 56419728 42782940 26553935 78045010 71894686 28378330 50365048 28210932 13357697 23098983 57867844 16078657 15927015 15672785 22536888 46908035 47459245 12045072 81428323 15901108 15829185 15895028 76787222 57867515 73662844 42519392 15674632 19745654 58337572 15927016 54020293 55821299 cdd: 10915 xref: COG1197 gene: Mfd desc: Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] num: 32 78043233 20808914 29374898 19745206 15612632 22536193 81429216 70727507 23097518 73663562 15896463 24378538 52078550 18311466 15674256 57866056 15902050 46906446 16077123 15926180 55820109 76788164 25010083 42518364 58336612 56961865 15899955 42779132 28377424 28209962 56418583 15671995 cdd: 10916 xref: COG1198 gene: PriA desc: Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] num: 33 28378315 15673879 76788499 42519413 18310727 15615072 15903623 28210906 46908056 15894998 70726703 39938640 58337596 15675505 22536498 81428303 56964084 56419705 15901568 78043791 23098960 25010377 24378965 42782960 52080174 57866751 19746554 15926795 20807951 16078634 73662868 55821415 29377580 cdd: 10917 xref: COG1199 gene: DinG desc: Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] num: 39 19745746 70726458 58337449 24379729 73662598 52080748 55820864 16079273 46908132 42779241 56963828 28378418 25010639 81428523 15902755 29375738 16079297 57866955 15614355 22536702 18310179 15674717 42780766 23100569 76786927 42519127 15673814 56420711 15614254 52080721 56420079 15900695 15894949 15927036 42780745 46906393 29376872 28377230 23099217 cdd: 10918 xref: COG1200 gene: RecG desc: RecG-like helicase [DNA replication, recombination, and repair / Transcription] num: 32 42519402 78043676 16078650 15675625 19746733 25011766 73662852 15674226 20807935 57866670 76788227 28378326 15901531 15895013 56419721 46908043 56964070 29377569 18310713 22537822 15903582 70726688 28210919 55821697 23098975 58337584 52080190 42782947 81428314 15615058 24380195 15926810 cdd: 10921 xref: COG1203 gene: COG1203 desc: Predicted helicases [General function prediction only] num: 8 78043279 28211141 24380132 20809004 28210839 15675459 15612899 56965359 cdd: 10923 xref: COG1205 gene: COG1205 desc: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] num: 5 56963784 52080730 16079280 15614327 56420072 cdd: 10924 xref: COG1206 gene: Gid desc: NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] num: 31 70726664 42782924 50365058 52080215 15926834 42519035 56964042 25011009 16078676 55820943 81428599 78044952 81428598 15900822 28378507 42560917 15673213 29376203 57866717 50365349 76788131 15675145 15615029 19746111 42561029 73662826 58337279 24379443 22537130 15902888 46907503 cdd: 10925 xref: COG1207 gene: GlmU desc: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] num: 32 16077118 15674567 56418578 28377365 57866043 46906430 15926176 52078545 42779128 15896469 56961860 29374717 28209956 23097513 20808921 76788672 55820642 78044455 58336560 15673865 24380014 73663566 15902935 81429260 15612628 70727511 19745574 42518294 25011635 15900863 22537681 18311472 cdd: 10926 xref: COG1208 gene: GCD1 desc: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] num: 12 15896233 56421656 16077794 15615886 42783393 20808416 56962268 15896307 42782448 20806597 56418895 15613979 cdd: 10927 xref: COG1209 gene: RfbA desc: dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] num: 22 25011322 23098584 28377960 24379858 76788332 16080835 15615925 18310183 18309598 78044259 23099876 15895600 56965453 15672176 55821251 29376702 42780409 15674953 15902364 42518975 19745995 22537358 cdd: 10928 xref: COG1210 gene: GalU desc: UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] num: 55 76788651 56421855 73663330 58337977 19745365 57865457 55821805 28377616 15901907 15928079 46907310 15675935 15903944 23100349 16080620 42561506 19747034 24378821 15616214 81429114 16078879 70725580 15674413 42784103 21392812 42784441 15614866 25010514 28211869 26553468 52079689 18309492 16080137 10956341 56965460 78043028 56421804 47458952 56964862 58336950 15895518 73661368 15673321 23100385 29376295 22536589 15616279 15895602 42560669 12045312 52082103 13508406 42519467 20807219 18309488 cdd: 10929 xref: COG1211 gene: IspD desc: 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] num: 27 22537563 20808688 56418616 28212195 15896432 52078585 78043736 15925954 15612670 15901131 46906468 56961907 46907311 15925958 25011529 26553731 57866163 29376680 76787697 13507994 73661663 15903192 42779166 18311411 31544446 28378484 12044968 cdd: 10932 xref: COG1214 gene: COG1214 desc: Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] num: 44 81427963 56962643 58336725 56418772 54020245 50365311 28212029 39938987 15675693 15672274 22537898 24378880 42518529 78042765 18311147 15902173 47458966 31544412 13508030 16077659 46908313 76787251 42779361 26553584 20807037 52079048 15927626 71894039 57867555 15900069 13357872 23098101 15896094 29376968 42560860 70725983 73662136 15828590 12045060 15613109 55821744 28377583 19746801 25011841 cdd: 10933 xref: COG1215 gene: COG1215 desc: Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] num: 48 28378237 15672858 15672662 42560667 15894968 28378758 15675933 18311053 29376958 81428857 16077497 56419576 28211004 28210555 76787260 15894764 15895787 15928252 58336453 42784401 24379836 29375472 52082516 42561489 26554087 42518167 28210817 15673247 15895849 46906774 20808536 58337687 10956340 15895838 28379211 42561503 58336518 22537690 52082435 42561509 57865729 42561496 19747032 25011645 56964413 15894839 15614794 28378492 cdd: 10934 xref: COG1216 gene: COG1216 desc: Predicted glycosyltransferases [General function prediction only] num: 23 25011523 29376705 29376704 28377988 15896320 18309597 58337989 15895440 42518956 78043710 15895587 78043468 56965454 15895594 76787466 28377989 29376688 15895579 15895588 22537557 56421850 15895441 15895614 cdd: 10935 xref: COG1217 gene: TypA desc: Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] num: 33 70726844 42518921 81428689 46907295 29376954 15926694 58337139 55820795 24379027 50365286 57866637 15900582 42560764 52080078 28210762 18310756 73662989 28378761 25010589 15673997 56964166 16078541 15675426 15615195 76788669 20807363 15894961 56419605 22536652 15902642 42783051 19746476 23098041 cdd: 10937 xref: COG1219 gene: ClpX desc: ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] num: 32 42518937 15673133 15895897 28378738 58337154 81428671 46907495 23099532 28211966 15674910 18310374 16079874 73662399 76786965 29376445 42783609 56964401 56421187 52081305 15901412 19745953 55820660 25011425 22537459 15927253 15903470 24379392 70726252 20807120 57867149 78043800 15615614 cdd: 10938 xref: COG1220 gene: HslU desc: ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] num: 19 29376200 28378504 70726661 78043832 56419749 42782920 81428595 20807894 56964039 73662823 23099005 52080218 42519038 57866720 58337282 15926837 46907506 15615026 16078679 cdd: 10939 xref: COG1221 gene: PspF desc: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] num: 19 46907015 20806848 29375591 52081183 42784358 29377444 16079762 28378128 29376479 20807307 20806717 15893673 29374677 56965833 20806706 28377466 16079237 15613294 29377662 cdd: 10943 xref: COG1225 gene: Bcp desc: Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] num: 44 18309249 15927437 42780922 73662239 42780672 56419012 52080423 20807505 19746502 70726099 56963597 23098307 15675451 18309723 44004529 56963091 20808004 52079332 15615431 42782682 52080829 22537289 16079372 15893619 15614085 23099137 76786793 25011247 42779671 15613511 15614140 56420614 28378905 56419434 56420093 15614280 57867295 23099277 56420170 42560613 50812202 23098358 28209917 56420817 cdd: 10945 xref: COG1227 gene: PPX1 desc: Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion] num: 36 20807838 22537544 28378117 56964667 29376170 76788545 15895407 57867209 73662181 25011509 58337415 20808804 19745537 15901378 56421282 23098473 46907676 28378498 55820464 15674527 15927281 57867405 42519099 31544703 70726035 16081107 15903432 24380063 52082169 28211308 18311037 42781911 70726222 15673794 15927493 81428582 cdd: 10948 xref: COG1230 gene: CzcD desc: Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] num: 30 15901685 28379653 25010538 15895802 15903714 16079718 15613801 57866354 42782813 15927720 58336678 15673589 73662044 15925872 56421416 56419116 42780902 52081757 56965151 42518471 56419942 55820971 57867655 70725889 15674879 22536613 19745920 46908747 76787255 23098854 cdd: 10949 xref: COG1231 gene: COG1231 desc: Monoamine oxidase [Amino acid transport and metabolism] num: 4 16078962 23098751 42781164 42781077 cdd: 10950 xref: COG1232 gene: HemY desc: Protoporphyrinogen oxidase [Coenzyme metabolism] num: 14 46907117 73662276 70726131 52079501 16078078 56963305 42780244 15613767 23098624 57867290 42781512 15927406 78044141 56419198 cdd: 10951 xref: COG1233 gene: COG1233 desc: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] num: 11 46907232 28379632 15928143 15613234 15614411 23099914 18310541 70725492 23099916 15928140 70725489 cdd: 10952 xref: COG1234 gene: ElaC desc: Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] num: 61 78043784 24378806 76787130 56964901 20807421 15900575 16081089 23098628 42518998 42783256 22537368 19745356 23099311 15902635 73662558 28378714 28378827 57867491 46907164 29377218 15894862 76788127 15674406 15615564 78044467 52079508 81429059 15893655 81428654 18310345 52082609 15674944 28211799 15672701 56963812 15004751 16079441 16078088 28210613 15616585 55821233 46908204 57866978 24379869 15927085 25010508 19745986 15614276 52080917 25011331 22536582 15672612 56420868 23100903 29376245 70726413 15894609 58337247 15672524 56419202 42780263 cdd: 10953 xref: COG1235 gene: PhnP desc: Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] num: 34 56965852 55821167 42518155 15896774 56422005 52082609 46906532 16081089 29375772 15925727 28209938 29376000 76788653 58336430 15616585 28377008 81427694 19745652 57865892 15903148 15672377 15927559 22536885 20808969 18311587 23100903 70725023 15901087 42784656 24379905 73661334 25010798 29376360 15674630 cdd: 10954 xref: COG1236 gene: YSH1 desc: Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] num: 5 42780885 28210685 56965023 78043144 20807203 cdd: 10955 xref: COG1237 gene: COG1237 desc: Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] num: 6 15893825 20808297 23099371 18309906 28211773 15927125 cdd: 10960 xref: COG1242 gene: COG1242 desc: Predicted Fe-S oxidoreductase [General function prediction only] num: 26 78043108 15927337 46907892 55821622 73662313 16080100 52081532 24380073 15902613 15902614 42783938 76787125 19745533 15895026 15674248 15615846 70726162 22537548 15896484 25011513 57867202 15674523 28209949 29375385 28210562 18311539 cdd: 10961 xref: COG1243 gene: ELP3 desc: Histone acetyltransferase [Transcription / Chromatin structure and dynamics] num: 7 18310699 20807433 28210931 70726334 15895026 73662483 20807915 cdd: 10964 xref: COG1246 gene: ArgA desc: N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] num: 9 52082227 42779997 42781967 56965629 42784498 15616334 16080749 56421819 42781395 cdd: 10965 xref: COG1247 gene: COG1247 desc: Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] num: 41 16080709 15901314 57865498 22537966 70725543 52082180 56965529 42518804 28379574 15900406 15612996 78042633 16080152 22538113 15902480 44004501 23098726 25011907 15928108 25012001 24379509 73661679 52080318 76788325 56419499 16077811 56421455 52081129 15672080 55821304 42781132 23097789 15902747 42781894 76788684 58337389 23097910 15894145 56419128 15673759 46907628 cdd: 10966 xref: COG1249 gene: Lpd desc: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] num: 113 13508129 15901026 25011487 24378648 57866999 57866609 15672041 42519633 15901430 15926681 54020604 54020222 70726857 42783281 28377284 23098870 42781858 19746013 15614388 55820636 56964551 73662546 71894175 28378764 22537044 15612779 20808293 73663657 22536297 70725218 50364857 57865464 56964217 46907287 52080944 28378020 22538158 15927099 15613342 55821073 15829232 15828492 15674854 42518128 19745893 70726398 81428692 81429481 70727396 16078525 22537522 24378658 52078930 15675028 29375923 46907597 15903485 26553963 15615215 22537405 47459415 31544686 15902736 29376215 16077876 15674034 57865567 46907661 25010952 20806617 29377713 28379636 16077399 58337397 55820496 15672828 76788239 42561077 76787855 25010186 71894297 52079284 56421631 28378490 15926272 57865799 20808100 15900677 46907141 23099322 56420914 70725228 76788399 52080062 24379827 57866191 47459010 56419596 24379293 56964182 15903092 78044229 15615327 28211667 73663002 42560816 39939089 12045127 70725224 16079462 42783065 58337501 73662945 cdd: 10967 xref: COG1250 gene: FadB desc: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] num: 36 52081771 15925935 23100467 20807049 15895965 15614558 78043701 67078243 76788407 73663733 16079472 78044398 23099850 56965648 73661758 57865719 42784519 22537813 42784190 15616362 18311279 15616050 15612767 78044436 56420571 28212008 15895279 56421543 16080336 23098452 52082253 56419854 25011757 56964754 78044975 56421930 cdd: 10968 xref: COG1251 gene: NirB desc: NAD(P)H-nitrite reductase [Energy production and conversion] num: 17 15927978 28212100 70725652 56420403 18310777 57865464 16077399 56963388 52078930 78043443 56963386 52078928 15895713 16077401 78044892 18309996 15613176 cdd: 10969 xref: COG1252 gene: Ndh desc: NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] num: 40 28377864 20808841 56964701 42784256 22537882 73663143 15926527 42784122 76788081 15615977 70727011 15615969 70727014 52080505 28377235 58337880 15926534 46908810 52081701 23100572 46908563 73663146 15926530 29377700 29376564 57866467 42784110 25011827 15672811 23098820 52081710 16080263 57866477 16078294 56964688 23099805 56421488 16080273 15672810 56421494 cdd: 10970 xref: COG1253 gene: TlyC desc: Hemolysins and related proteins containing CBS domains [General function prediction only] num: 57 52079440 39938639 16079531 56963066 16080182 23099856 16078020 15903820 52081622 42518732 15926379 13507898 29375297 15901786 15673816 52079438 73663324 15894701 81429079 70725159 42519475 15893751 58336960 15828985 23098105 46908466 42782445 46908573 25011511 55821617 28379179 71894439 12044998 16079714 70727192 58336937 56419099 15673796 18309419 22537546 56419163 15674525 57866313 24380069 46908924 76788362 52082174 56965180 19745535 16078024 31544693 81427645 73663172 42779754 54020644 42781194 13357628 cdd: 10971 xref: COG1254 gene: AcyP desc: Acylphosphatases [Energy production and conversion] num: 35 15901797 57866868 24380098 58337787 22537747 23100371 15616215 15672588 15616216 23100370 15926984 52079222 15674506 28378261 56418946 16077831 23100708 46907609 15903831 25011696 23100373 20808184 42519504 70726508 19745514 15896085 15616217 18310955 55820343 29376898 73662656 23100374 56963897 76786798 81428991 cdd: 10973 xref: COG1256 gene: FlgK desc: Flagellar hook-associated protein [Cell motility and secretion] num: 12 46906956 52082076 56421672 42780831 20806999 23099962 28211376 15895480 15616183 78044505 56964843 16080594 cdd: 10980 xref: COG1263 gene: PtsG desc: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism] num: 210 56420282 15675776 73661645 24380385 30023990 28210041 15674662 28379828 58337042 15894686 29376161 58336738 29376082 55820289 23098070 19746968 58336931 15901555 15613407 42519782 76787362 70725733 52082626 15903741 25010264 73661821 46907481 15896666 50364848 15675853 56421979 29374686 52079230 29377861 15828488 15902712 15927903 42779634 18309058 50812303 15927303 42779562 15927957 71894170 55820594 42561174 73662346 26554043 46907267 25011984 42518682 50365317 70726199 28379836 22538095 18309178 57867790 15925945 15828835 15613236 22536466 50365128 15675645 56963035 22536954 70725672 29377084 70725359 25010865 28377719 50364823 16080892 28379841 28379609 28379408 16078453 18309401 46908961 58337744 56962487 46907888 42519689 24380379 15928117 15612859 16080978 22536376 50812175 42560614 15900487 28377737 29376720 16077847 73661543 15614419 76788605 81429404 16077887 29375541 20806976 15613158 57867252 18310516 50365134 73661892 42779777 58337963 18311139 52079180 55821706 52079289 56963852 50365344 52079986 24379420 42560798 26553626 56419526 56962092 29374910 15925893 50365435 76788255 15673113 15893822 81427674 42519186 15926151 58337307 15673442 15925896 15828832 42519869 28377125 56965099 70725522 15903609 15901519 56963845 15614779 56965548 28379073 15901712 50365249 58337965 28377191 76788558 42519806 12044921 52082301 73663591 56963218 26553906 42561274 52078722 15616136 26553588 56965524 19746889 15903571 57867775 16077837 58337838 42560684 56965342 16077304 13507946 76787932 28379541 29376929 52082496 26554416 25011774 70727537 73661903 28379599 50365244 28379617 52079274 15893860 19746751 42779990 57865545 15902549 15612985 57865419 70725742 28377190 52082481 54020606 52078660 46906253 42519715 31544338 47458897 15900652 50365333 22537830 24380203 25010346 23099337 47459299 19745690 15893714 18309543 42783164 81428812 56961976 73661432 15894632 cdd: 10982 xref: COG1266 gene: COG1266 desc: Predicted metal-dependent membrane protease [General function prediction only] num: 6 15927915 70725597 57867808 15902309 70725723 15900222 cdd: 10983 xref: COG1267 gene: PgpA desc: Phosphatidylglycerophosphatase A and related proteins [Lipid metabolism] num: 18 56421502 16079242 16080281 56964708 15614004 52080691 15615986 15903232 52081723 23099814 28379690 19746929 29375240 42784135 15675816 20807409 46908572 56964957 cdd: 10984 xref: COG1268 gene: BioY desc: Uncharacterized conserved protein [General function prediction only] num: 42 25010580 78044474 18310527 55821311 15902735 15615920 24380190 57867785 52081694 76786715 23099172 20807259 56964372 23099801 15896696 81428438 29377530 15893504 28211709 76787519 19745355 16078101 15894639 15900676 28377256 15927862 16080256 73661934 15674405 15673763 46906843 42782698 22536581 56421553 22536642 55820751 25010507 28211498 56421479 15672297 70725771 42784102 cdd: 10985 xref: COG1269 gene: NtpI desc: Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] num: 7 18310625 15901176 19745318 29376060 28211926 15674358 28210700 cdd: 10986 xref: COG1270 gene: CbiB desc: Cobalamin biosynthesis protein CobD/CbiB [Coenzyme metabolism] num: 8 18310021 78043696 20806889 28210442 56420798 46907411 15614151 15893871 cdd: 10987 xref: COG1271 gene: CydA desc: Cytochrome bd-type quinol oxidase, subunit 1 [Energy production and conversion] num: 16 15672686 56420619 15926672 56419139 56963059 73663014 15613441 57866591 23098505 28377910 42519859 70726870 15616537 42784383 78044468 29376570 cdd: 10988 xref: COG1272 gene: COG1272 desc: Predicted membrane protein, hemolysin III homolog [General function prediction only] num: 34 81428574 42519027 15672479 42781335 22537466 19746105 15894169 57867682 76786976 52080688 15615428 70725872 55820654 73662026 39938644 18310456 56964297 15675135 25011431 16079238 28563938 24379384 15927750 28210321 23099720 18310897 28379651 15901316 46908096 15903363 42784635 58337271 29376239 15894234 cdd: 10991 xref: COG1275 gene: TehA desc: Tellurite resistance protein and related permeases [Inorganic ion transport and metabolism] num: 14 19745981 15900329 15902415 24380461 26553672 15926756 29375246 15672360 31544658 28210373 25011336 76787665 15674939 22537373 cdd: 10992 xref: COG1276 gene: PcoD desc: Putative copper export protein [Inorganic ion transport and metabolism] num: 6 52078926 56963920 42781066 46908297 23099868 15614853 cdd: 10993 xref: COG1277 gene: NosY desc: ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only] num: 30 15893435 42784573 15896277 52082402 31544579 13508072 42782749 15615775 20808766 15893441 52079382 15828668 13357649 26553756 46907867 46906996 56420179 13357953 28211038 46908197 20808274 15896756 16077974 23097727 13508074 42560871 15893434 71894153 52078985 15895990 cdd: 10995 xref: COG1279 gene: COG1279 desc: Lysine efflux permease [General function prediction only] num: 10 15926478 15612994 42781134 28378138 73663349 15895853 70727059 16078150 81428421 56962974 cdd: 10996 xref: COG1280 gene: RhtB desc: Putative threonine efflux protein [Amino acid transport and metabolism] num: 21 70727595 15616057 56419275 55821377 10956453 52079028 16079764 42781542 52079083 28211795 21392963 15615494 15612992 56421521 56421417 42781446 56420252 52080608 57865997 73662911 73662637 cdd: 10999 xref: COG1283 gene: NptA desc: Na+/phosphate symporter [Inorganic ion transport and metabolism] num: 21 56421033 16079596 56963479 15900410 23099388 19746604 15902483 15613970 42779954 15828812 46907059 15613916 15675553 28210590 52078705 18311350 15925808 20808417 56963433 73661827 52081089 cdd: 11000 xref: COG1284 gene: COG1284 desc: Uncharacterized conserved protein [Function unknown] num: 130 13508396 28378620 15900978 42519255 52080527 15673692 16079308 52082062 56963747 15673945 42781235 29377548 42783408 56964332 12045302 58337491 16078160 15675896 56964830 73663258 52081048 42783815 23098437 24380433 47459005 15615526 71894125 57865541 15615479 15901928 46908680 15675897 23099225 42784209 56421007 18311347 57866214 29375742 19746994 15673944 15893787 56421638 46907476 56420722 71894564 15673946 15672607 25012097 15675895 22538240 19747040 52082442 15616440 15894135 19746996 12045292 28211016 26554340 70727247 42779315 81428477 15675941 56962577 15926323 58337612 58337269 18309280 81428616 18309387 56962456 15828580 31544827 15894605 55821986 81427936 23100093 25012096 20807901 15616166 16077595 54020414 42780732 28212091 25012164 16080581 46908142 22538239 52080759 76787577 15614241 16079566 76788348 46908497 29376488 20809044 55821935 24380432 56420051 52079607 42782331 81428662 73663383 16080935 15893722 81427706 50365090 15903062 29376118 23098644 73662874 42561006 23100186 42519025 13358130 18309859 42784001 42519430 42780356 19746995 42782718 22538304 78042996 76787589 13508369 16078176 56963679 20808545 52079027 15903964 46907613 cdd: 11001 xref: COG1285 gene: SapB desc: Uncharacterized membrane protein [Function unknown] num: 25 52079160 15903683 56962637 29375098 16077733 29375352 15673601 15613104 28210560 81429310 56421451 78044296 22537696 15901652 15615787 42784080 42782591 18309574 25011648 15896891 23097544 42781131 46908774 42783259 76788025 cdd: 11004 xref: COG1288 gene: COG1288 desc: Predicted membrane protein [Function unknown] num: 31 56965493 15675441 15901964 42518720 42561434 57865704 81427708 42782381 25012118 22538258 16077371 23100167 23098148 18309967 70725201 70725358 73661643 15904000 52081743 50364830 29374759 15926754 76788017 81427990 73661831 19746491 52078775 57865947 28212049 15614871 56963379 cdd: 11005 xref: COG1289 gene: COG1289 desc: Predicted membrane protein [Function unknown] num: 5 15928090 70725569 16080408 57865475 73661712 cdd: 11006 xref: COG1290 gene: QcrB desc: Cytochrome b subunit of the bc complex [Energy production and conversion] num: 7 16079312 52080763 56963673 23099230 56420726 15614236 42780724 cdd: 11007 xref: COG1291 gene: MotA desc: Flagellar motor component [Cell motility and secretion] num: 17 52079918 15893596 23099680 56421065 56963748 20807042 16078433 16080025 15895121 23100000 42780819 28211322 15615802 78043109 46906936 42783686 52081473 cdd: 11008 xref: COG1292 gene: BetT desc: Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane] num: 39 15614020 23100229 70725427 56964175 57866849 23100289 70725854 15927765 15926929 56965361 76787915 23097855 56963391 73662718 22537280 70726560 46908327 42779693 81427879 73661632 23099857 73662653 23098159 42784403 15615208 28379679 23097925 57865784 73662010 42784622 57865536 15928201 15616457 67077931 23098713 56962064 73661502 70725276 23098115 cdd: 11010 xref: COG1294 gene: AppB desc: Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion] num: 14 56420618 15616536 52081561 23098504 57866592 70726869 56419140 73663013 56963058 15613440 15926673 42784384 16080124 15672687 cdd: 11011 xref: COG1295 gene: Rbn desc: Predicted membrane protein [Function unknown] num: 12 15672595 46907937 15900558 15927457 15902618 15828673 71894114 19746326 23097645 57867339 42519468 15675286 cdd: 11012 xref: COG1296 gene: AzlC desc: Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism] num: 26 15925715 56965065 56419208 42783139 24378883 76787792 70725010 78043767 15900084 56965693 28377799 15615473 28379573 22538186 73661319 57865912 56962625 25012045 55821741 29377000 46907670 23098574 15673595 42780867 52079513 16079724 cdd: 11013 xref: COG1297 gene: COG1297 desc: Predicted membrane protein [Function unknown] num: 5 20806685 56962356 78045182 81427933 18310260 cdd: 11014 xref: COG1298 gene: FlhA desc: Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion] num: 12 46906931 16078702 56964015 23099030 78044126 42780862 15615001 28211316 20807869 15895416 52080242 56419773 cdd: 11015 xref: COG1299 gene: FruA desc: Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism] num: 74