1. At the beginning of the file:
>name of contact
Your Name
>email
Your Email Address
>program name
MyMotif
2. And then for each of the data sets:
>data set
dm01
>parameters
Listing of all parameter values in this run, one per line, in the format:
parameter-name1=value1
parameter-name2=value2
...
>preprocessing
Short description of any manual preprocessing. Include any masking.
>postprocessing
Short description of any manual postprocessing. Include the rank of
the motif predicted in the results file, and why higher ranked predictions were
discarded.
>data set
dm02
...