Chemistry Lab University of Washington Computer Science & Engineering
 How accurately is ncRNA aligned within whole-genome multiple alignments?
  CSE Home     Computational Biology Home  About Us    Search    Contact Info 

 Results
 GMAJ  Help
    This is the home page for using ncRNA to test the accuracy of whole-genome multiple alignments. We evaluate the alignment accuracy of certain noncoding regions using ncRNA alignments from Rfam as a reference. We inspect the MULTIZ alignments from the UCSC Genome Browser for all the human sequences in the Rfam seed alignment.

All imperfect alignments and Infernal results are available for viewing using GMAJ. Click here to view the results.

Wang AX, Ruzzo WL, Tompa M. How accurately is ncRNA aligned within whole-genome multiple alignments? BMC Bioinformatics 2007, 8:417. Full Text


CSE logo Computer Science & Engineering
University of Washington
Box 352350
Seattle, WA  98195-2350
(206) 543-1695 voice, (206) 543-2969 FAX